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Lag0008580 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008580
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr9:25752996..25753838
RNA-Seq ExpressionLag0008580
SyntenyLag0008580
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CCA66054.1 hypothetical protein [Beta vulgaris subsp. vulgaris]3.0e-1841.59Show/hide
Query:  QEPDRVLGLIEGHFENIFSTSSPSKGEIDQVTSQVHPSVLDEMNNSLVRPFHREEVLRALNQIHPNKAPGPDGLSGAFYQHSWLVVGFDVVNCCLNILNN
        +E D +  +   +F +IF++S+PS   ++ V S + P V +E N  L+ PF ++E+L AL Q+HP KAPGPDG+   FYQ  W +VG DV +   NIL+ 
Subjt:  QEPDRVLGLIEGHFENIFSTSSPSKGEIDQVTSQVHPSVLDEMNNSLVRPFHREEVLRALNQIHPNKAPGPDGLSGAFYQHSWLVVGFDVVNCCLNILNN

Query:  KASPAPLNETIVA
         +SP+ +N T +A
Subjt:  KASPAPLNETIVA

XP_010686122.1 PREDICTED: uncharacterized protein LOC104900404 [Beta vulgaris subsp. vulgaris]2.6e-1740.71Show/hide
Query:  QEPDRVLGLIEGHFENIFSTSSPSKGEIDQVTSQVHPSVLDEMNNSLVRPFHREEVLRALNQIHPNKAPGPDGLSGAFYQHSWLVVGFDVVNCCLNILNN
        +E + +  L++ +F  IF++S PS G +D+V   V  SV  E N+ L++P+ +EE+  AL Q+HP KAPGPDGL   FYQ  W ++G +V +   NIL++
Subjt:  QEPDRVLGLIEGHFENIFSTSSPSKGEIDQVTSQVHPSVLDEMNNSLVRPFHREEVLRALNQIHPNKAPGPDGLSGAFYQHSWLVVGFDVVNCCLNILNN

Query:  KASPAPLNETIVA
           P+ +N T +A
Subjt:  KASPAPLNETIVA

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]2.1e-1948.15Show/hide
Query:  RVLGLIEGHFENIFSTSSPSKGEIDQVTSQVHPSVLDEMNNSLVRPFHREEVLRALNQIHPNKAPGPDGLSGAFYQHSWLVVGFDVVNCCLNILNNKASP
        +V+G+IE +F  +FS+S PS   I+QVT  +   V    N  L++PF  EE++ AL+QIHP+KA GPD  S AFY++ W +VG DV  CCLNILNN    
Subjt:  RVLGLIEGHFENIFSTSSPSKGEIDQVTSQVHPSVLDEMNNSLVRPFHREEVLRALNQIHPNKAPGPDGLSGAFYQHSWLVVGFDVVNCCLNILNNKASP

Query:  APLNETIV
          L+E I+
Subjt:  APLNETIV

XP_023878301.1 uncharacterized protein LOC111990748 [Quercus suber]1.2e-1748.51Show/hide
Query:  HFENIFSTSSPSKGEIDQVTSQVHPSVLDEMNNSLVRPFHREEVLRALNQIHPNKAPGPDGLSGAFYQHSWLVVGFDVVNCCLNILNNKASPAPLNETIV
        +F NI+S+S PS  +I++VT  +   V +EMN SL+R F +EEV  AL QIHPNKAPGPDG+S  F+Q  W +VG +V +  LN+LN+      LN+T +
Subjt:  HFENIFSTSSPSKGEIDQVTSQVHPSVLDEMNNSLVRPFHREEVLRALNQIHPNKAPGPDGLSGAFYQHSWLVVGFDVVNCCLNILNNKASPAPLNETIV

Query:  A
        +
Subjt:  A

XP_023891716.1 uncharacterized protein LOC112003738 [Quercus suber]6.7e-1840.56Show/hide
Query:  LRLLLARLWSWHHQLPGQEPDRVLGLIEGHFENIFSTSSPSKGEIDQVTSQVHPSVLDEMNNSLVRPFHREEVLRALNQIHPNKAPGPDGLSGAFYQHSW
        LR +L  LW         E + +   +  +FENI+ST+ P++  I+ V + +   V ++MN SL R   REEV  AL  IHP KAPGPDG+S  FYQ  W
Subjt:  LRLLLARLWSWHHQLPGQEPDRVLGLIEGHFENIFSTSSPSKGEIDQVTSQVHPSVLDEMNNSLVRPFHREEVLRALNQIHPNKAPGPDGLSGAFYQHSW

Query:  LVVGFDVVNCCLNILNNKASPAPLNET----IVATSSRREAAD
         +VG  V N  LN+LNN      +N+T    I  TSS ++  D
Subjt:  LVVGFDVVNCCLNILNNKASPAPLNET----IVATSSRREAAD

TrEMBL top hitse value%identityAlignment
A0A6J1DAR4 uncharacterized protein LOC1110189541.0e-1948.15Show/hide
Query:  RVLGLIEGHFENIFSTSSPSKGEIDQVTSQVHPSVLDEMNNSLVRPFHREEVLRALNQIHPNKAPGPDGLSGAFYQHSWLVVGFDVVNCCLNILNNKASP
        +V+G+IE +F  +FS+S PS   I+QVT  +   V    N  L++PF  EE++ AL+QIHP+KA GPD  S AFY++ W +VG DV  CCLNILNN    
Subjt:  RVLGLIEGHFENIFSTSSPSKGEIDQVTSQVHPSVLDEMNNSLVRPFHREEVLRALNQIHPNKAPGPDGLSGAFYQHSWLVVGFDVVNCCLNILNNKASP

Query:  APLNETIV
          L+E I+
Subjt:  APLNETIV

A0A6P6WTP1 uncharacterized protein LOC1137359732.8e-1744.64Show/hide
Query:  QEPDRVLGLIEGHFENIFSTSSPSKGEIDQVTSQVHPSVLDEMNNSLVRPFHREEVLRALNQIHPNKAPGPDGLSGAFYQHSWLVVGFDVVNCCLNILNN
        Q  + +  +I  HF  IFSTS P+   ID V  +V   V  EMN+ L+R +   EV +AL+Q+HP K+PGPDG+S  FYQ  W +VG DV    L +LN 
Subjt:  QEPDRVLGLIEGHFENIFSTSSPSKGEIDQVTSQVHPSVLDEMNNSLVRPFHREEVLRALNQIHPNKAPGPDGLSGAFYQHSWLVVGFDVVNCCLNILNN

Query:  KASPAPLNETIV
           P  LN T V
Subjt:  KASPAPLNETIV

A0A7N2L6Z9 Reverse transcriptase domain-containing protein2.1e-1741.27Show/hide
Query:  QEPDRVLGLIEGHFENIFSTSSPSKGEIDQVTSQVHPSVLDEMNNSLVRPFHREEVLRALNQIHPNKAPGPDGLSGAFYQHSWLVVGFDVVNCCLNILNN
        ++ D +      +FE+I+STS+PS   +D+VT+ +   + +EMN  L R F REE++ AL QIHP K+PGPDG+S  F+Q  W +VG +V N  LN+LN 
Subjt:  QEPDRVLGLIEGHFENIFSTSSPSKGEIDQVTSQVHPSVLDEMNNSLVRPFHREEVLRALNQIHPNKAPGPDGLSGAFYQHSWLVVGFDVVNCCLNILNN

Query:  KASPAPLNET----IVATSSRREAAD
          S   +N+T    I  TS+ +   D
Subjt:  KASPAPLNET----IVATSSRREAAD

A0A803P9M1 Uncharacterized protein1.6e-1745.05Show/hide
Query:  LIEGHFENIFSTSSPSKGEIDQVTSQVHPSVLDEMNNSLVRPFHREEVLRALNQIHPNKAPGPDGLSGAFYQHSWLVVGFDVVNCCLNILNNKASPAPLN
        LIE +F N+FSTS+ +  ++D++  +V P V + MN  L+ PF  EEV+ A+  ++P KAPG DGL   FYQ  W  +  +VV  CL ILN++A+ A LN
Subjt:  LIEGHFENIFSTSSPSKGEIDQVTSQVHPSVLDEMNNSLVRPFHREEVLRALNQIHPNKAPGPDGLSGAFYQHSWLVVGFDVVNCCLNILNNKASPAPLN

Query:  ETIVATSSRRE
        ETI+A + + E
Subjt:  ETIVATSSRRE

F4NCJ6 Reverse transcriptase domain-containing protein1.5e-1841.59Show/hide
Query:  QEPDRVLGLIEGHFENIFSTSSPSKGEIDQVTSQVHPSVLDEMNNSLVRPFHREEVLRALNQIHPNKAPGPDGLSGAFYQHSWLVVGFDVVNCCLNILNN
        +E D +  +   +F +IF++S+PS   ++ V S + P V +E N  L+ PF ++E+L AL Q+HP KAPGPDG+   FYQ  W +VG DV +   NIL+ 
Subjt:  QEPDRVLGLIEGHFENIFSTSSPSKGEIDQVTSQVHPSVLDEMNNSLVRPFHREEVLRALNQIHPNKAPGPDGLSGAFYQHSWLVVGFDVVNCCLNILNN

Query:  KASPAPLNETIVA
         +SP+ +N T +A
Subjt:  KASPAPLNETIVA

SwissProt top hitse value%identityAlignment
P14381 Transposon TX1 uncharacterized 149 kDa protein2.6e-0427.47Show/hide
Query:  PGQEPDRVLGLIEGHFENIFSTSSPSKGEIDQVTSQVHPSVLDEMNNSLVRPFHREEVLRALNQIHPNKAPGPDGLSGAFYQHSWLVVGFD
        P ++P+ +       ++N+FS    S    +++   + P V +     L  P   +E+ +AL  +  NK+PG DGL+  F+Q  W  +G D
Subjt:  PGQEPDRVLGLIEGHFENIFSTSSPSKGEIDQVTSQVHPSVLDEMNNSLVRPFHREEVLRALNQIHPNKAPGPDGLSGAFYQHSWLVVGFD

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGGGTGGTTCGTAGCACAGGGCAGAGGATTCAGAGGTTTGAGGAAACGTGGCTCCAGTCCACTGATTTTGGGGAGGCAGTTTCAGCAGGCTGGAGGTCTGAGACT
CTTGTTAGCTCGCCTGTGGAGCTGGCATCATCAGCTACCAGGTCAGGAGCCAGATAGGGTGTTGGGCCTGATTGAGGGGCATTTTGAGAACATCTTCTCGACATCCTCTC
CTTCTAAGGGTGAGATTGATCAGGTGACCTCTCAAGTCCACCCTTCGGTTTTGGATGAGATGAACAACAGTCTTGTGCGGCCTTTCCATCGCGAGGAGGTCCTTCGAGCT
TTGAATCAGATCCACCCCAATAAAGCTCCGGGACCAGATGGTCTGTCTGGAGCCTTTTACCAGCATTCCTGGTTGGTAGTTGGGTTTGATGTGGTTAACTGCTGTTTGAA
CATCCTGAATAACAAAGCCTCTCCAGCACCTTTGAATGAAACGATTGTCGCAACGTCATCGCGACGCGAAGCGGCCGACGTCCTTTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCCGGGTGGTTCGTAGCACAGGGCAGAGGATTCAGAGGTTTGAGGAAACGTGGCTCCAGTCCACTGATTTTGGGGAGGCAGTTTCAGCAGGCTGGAGGTCTGAGACT
CTTGTTAGCTCGCCTGTGGAGCTGGCATCATCAGCTACCAGGTCAGGAGCCAGATAGGGTGTTGGGCCTGATTGAGGGGCATTTTGAGAACATCTTCTCGACATCCTCTC
CTTCTAAGGGTGAGATTGATCAGGTGACCTCTCAAGTCCACCCTTCGGTTTTGGATGAGATGAACAACAGTCTTGTGCGGCCTTTCCATCGCGAGGAGGTCCTTCGAGCT
TTGAATCAGATCCACCCCAATAAAGCTCCGGGACCAGATGGTCTGTCTGGAGCCTTTTACCAGCATTCCTGGTTGGTAGTTGGGTTTGATGTGGTTAACTGCTGTTTGAA
CATCCTGAATAACAAAGCCTCTCCAGCACCTTTGAATGAAACGATTGTCGCAACGTCATCGCGACGCGAAGCGGCCGACGTCCTTTCCTAA
Protein sequenceShow/hide protein sequence
MSGWFVAQGRGFRGLRKRGSSPLILGRQFQQAGGLRLLLARLWSWHHQLPGQEPDRVLGLIEGHFENIFSTSSPSKGEIDQVTSQVHPSVLDEMNNSLVRPFHREEVLRA
LNQIHPNKAPGPDGLSGAFYQHSWLVVGFDVVNCCLNILNNKASPAPLNETIVATSSRREAADVLS