; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0008583 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008583
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr9:25804962..25806050
RNA-Seq ExpressionLag0008583
SyntenyLag0008583
Gene Ontology termsNA
InterPro domainsIPR000477 - Reverse transcriptase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7055450.1 unnamed protein product [Microthlaspi erraticum]2.7e-9047.6Show/hide
Query:  MRCISSTEFSILINGERRGNFKSRRGLRQGDPLSPYLLLLVAEGLSHLINKANNNGSLSGF-VCPNGPTISHLLFTDDSVIFCKAEERELLNLKNILKIY
        M C+SS  FS+LIN +  G    +RGLR+GDPLSP+L +L  EGL+HL+N+A   G + G      GP I HLLF DDS+  CKA +++   LK  LKIY
Subjt:  MRCISSTEFSILINGERRGNFKSRRGLRQGDPLSPYLLLLVAEGLSHLINKANNNGSLSGF-VCPNGPTISHLLFTDDSVIFCKAEERELLNLKNILKIY

Query:  EIASVESINYSKSAILFPPKLNIDRKVNLSSILGVNGVNNFGNYLGVPSMFSTNKSKDLSFILDKTWKVVQGWKNSFFSIAGRETLIKSVGQTIPSYVMG
          A+ +++N SKS+I F  K+  D+K+ + + LG++     G YLG+P  FS +K   LS+I D   K +  W +   S  G+E L+KSV   +P Y M 
Subjt:  EIASVESINYSKSAILFPPKLNIDRKVNLSSILGVNGVNNFGNYLGVPSMFSTNKSKDLSFILDKTWKVVQGWKNSFFSIAGRETLIKSVGQTIPSYVMG

Query:  VFRFPKNLCNEITRNFARFWWGSSPNKRKVHWVKWDKMCLPKIMGGLNFRDLEGFNKALIAKQVWRILTNPESLVSRFLKSIYFNNTNILEAELGRKPLN
         F+ PK LC ++    A FWW S  +KRK HW+ W++MCLPK MGG+ FRD+E FN+AL+AKQ W++L  PESL+ +FLKS YF++T+ LE+ +G +P  
Subjt:  VFRFPKNLCNEITRNFARFWWGSSPNKRKVHWVKWDKMCLPKIMGGLNFRDLEGFNKALIAKQVWRILTNPESLVSRFLKSIYFNNTNILEAELGRKPLN

Query:  LWRSLIWGRELLLKGLRHRIGNGVDTAMFRDPWL
         WRS+IWGRELL+KGLR R+GNG    ++ DPW+
Subjt:  LWRSLIWGRELLLKGLRHRIGNGVDTAMFRDPWL

CAA7061809.1 unnamed protein product [Microthlaspi erraticum]1.1e-8845.21Show/hide
Query:  MRCISSTEFSILINGERRGNFKSRRGLRQGDPLSPYLLLLVAEGLSHLINKANNNGSLSGF-VCPNGPTISHLLFTDDSVIFCKAEERELLNLKNILKIY
        M CI++  +S+LIN +  G    +RGLRQGDPLSP+L +L  EGL+HL+N+A   G + G      GP + HLLF DDS+  CKA +++   LK ILKIY
Subjt:  MRCISSTEFSILINGERRGNFKSRRGLRQGDPLSPYLLLLVAEGLSHLINKANNNGSLSGF-VCPNGPTISHLLFTDDSVIFCKAEERELLNLKNILKIY

Query:  EIASVESINYSKSAILFPPKLNIDRKVNLSSILGVNGVNNFGNYLGVPSMFSTNKSKDLSFILDKTWKVVQGWKNSFFSIAGRETLIKSVGQTIPSYVMG
           + + IN+SKS+I F  K++ D++  +  ++G+      G+YLG+P  FS +K + L ++ ++    V GW +   S  G+ETL+KSV   +P Y M 
Subjt:  EIASVESINYSKSAILFPPKLNIDRKVNLSSILGVNGVNNFGNYLGVPSMFSTNKSKDLSFILDKTWKVVQGWKNSFFSIAGRETLIKSVGQTIPSYVMG

Query:  VFRFPKNLCNEITRNFARFWWGSSPNKRKVHWVKWDKMCLPKIMGGLNFRDLEGFNKALIAKQVWRILTNPESLVSRFLKSIYFNNTNILEAELGRKPLN
         F+ PK +C ++    A FWW S  NK+ VHW+ W+KMCLPK +GG+ FRD+E FN+AL+AKQ WRIL  PESLV+R L+S YF   + +++++G +P  
Subjt:  VFRFPKNLCNEITRNFARFWWGSSPNKRKVHWVKWDKMCLPKIMGGLNFRDLEGFNKALIAKQVWRILTNPESLVSRFLKSIYFNNTNILEAELGRKPLN

Query:  LWRSLIWGRELLLKGLRHRIGNGVDTAMFRDPWL
         W S++WGRELL KGLR R+GNG+   ++ DPW+
Subjt:  LWRSLIWGRELLLKGLRHRIGNGVDTAMFRDPWL

KAG7533614.1 Zinc knuckle CX2CX4HX4C [Arabidopsis thaliana x Arabidopsis arenosa]2.8e-8745.03Show/hide
Query:  MRCISSTEFSILINGERRGNFKSRRGLRQGDPLSPYLLLLVAEGLSHLINKANNNGSLSGF-VCPNGPTISHLLFTDDSVIFCKAEERELLNLKNILKIY
        M  I+S  F++LIN +  GN    RGLRQGDPLSP+L +L +EGL+HL+N+A   G LSG    P GP I HLLF DDS+  CKA++ E+  +KNI K+Y
Subjt:  MRCISSTEFSILINGERRGNFKSRRGLRQGDPLSPYLLLLVAEGLSHLINKANNNGSLSGF-VCPNGPTISHLLFTDDSVIFCKAEERELLNLKNILKIY

Query:  EIASVESINYSKSAILFPPKLNIDRKVNLSSILGVNGVNNFGNYLGVPSMFSTNKSKDLSFILDKTWKVVQGWKNSFFSIAGRETLIKSVGQTIPSYVMG
          A+ + IN+ KS++ F   +  D K  + + LG+      G YLG+P  FS +K + L +I DK    + GW     S+ G+E L+K+V   +P Y M 
Subjt:  EIASVESINYSKSAILFPPKLNIDRKVNLSSILGVNGVNNFGNYLGVPSMFSTNKSKDLSFILDKTWKVVQGWKNSFFSIAGRETLIKSVGQTIPSYVMG

Query:  VFRFPKNLCNEITRNFARFWWGSSPNKRKVHWVKWDKMCLPKIMGGLNFRDLEGFNKALIAKQVWRILTNPESLVSRFLKSIYFNNTNILEAELGRKPLN
         F+  K  C  +T   + FWW +  ++RK HWV W+KMCL K +GGL FRD+E FN+AL+AKQ WR+L NP SL +RF KS YF++   LEAE+G +P  
Subjt:  VFRFPKNLCNEITRNFARFWWGSSPNKRKVHWVKWDKMCLPKIMGGLNFRDLEGFNKALIAKQVWRILTNPESLVSRFLKSIYFNNTNILEAELGRKPLN

Query:  LWRSLIWGRELLLKGLRHRIGNGVDTAMFRDPW---LSKKLTF-KPTCINWDMINWKVVDFI
         WRS++ GREL++KGLR  +GNG   +++ DPW   ++ +L F K   +N   +N KV D I
Subjt:  LWRSLIWGRELLLKGLRHRIGNGVDTAMFRDPW---LSKKLTF-KPTCINWDMINWKVVDFI

XP_013657066.1 uncharacterized protein LOC106361809 [Brassica napus]3.7e-8744.48Show/hide
Query:  MRCISSTEFSILINGERRGNFKSRRGLRQGDPLSPYLLLLVAEGLSHLINKANNNGSLSGF-VCPNGPTISHLLFTDDSVIFCKAEERELLNLKNILKIY
        M CIS+  +S+LING   G    +RGLRQGDPLSPYL +L AE LSHL NKA  + SL G  +    P ++HLLF DDS+ F  A  +    LK+I   Y
Subjt:  MRCISSTEFSILINGERRGNFKSRRGLRQGDPLSPYLLLLVAEGLSHLINKANNNGSLSGF-VCPNGPTISHLLFTDDSVIFCKAEERELLNLKNILKIY

Query:  EIASVESINYSKSAILFPPKLNIDRKVNLSSILGVNGVNNFGNYLGVPSMFSTNKSKDLSFILDKTWKVVQGWKNSFFSIAGRETLIKSVGQTIPSYVMG
        E  S ++IN SKS I F  K+  + K  + ++LG++     G YLG+P  F + K +  ++I+DK  KVV GWK   F+  G+E L+KS+   +P + M 
Subjt:  EIASVESINYSKSAILFPPKLNIDRKVNLSSILGVNGVNNFGNYLGVPSMFSTNKSKDLSFILDKTWKVVQGWKNSFFSIAGRETLIKSVGQTIPSYVMG

Query:  VFRFPKNLCNEITRNFARFWWGSSPNKRKVHWVKWDKMCLPKIMGGLNFRDLEGFNKALIAKQVWRILTNPESLVSRFLKSIYFNNTNILEAELGRKPLN
        +FR PK +C EI    ARFWWG+  +K  +HW  W ++C+PK  GGL FRDLE FN+AL+ KQVWRI+ NP  L++R L++ YF + +IL+A L +K   
Subjt:  VFRFPKNLCNEITRNFARFWWGSSPNKRKVHWVKWDKMCLPKIMGGLNFRDLEGFNKALIAKQVWRILTNPESLVSRFLKSIYFNNTNILEAELGRKPLN

Query:  LWRSLIWGRELLLKGLRHRIGNGVDTAMFRDPWLSKKLTFKPTCINWDMINWKVVDFILPSG
         W+S++ G++L++KG+R+ IGNG  T M+ D WLS      P        N KV D++L +G
Subjt:  LWRSLIWGRELLLKGLRHRIGNGVDTAMFRDPWLSKKLTFKPTCINWDMINWKVVDFILPSG

XP_022545183.1 uncharacterized protein LOC111199409 [Brassica napus]1.1e-8644.48Show/hide
Query:  MRCISSTEFSILINGERRGNFKSRRGLRQGDPLSPYLLLLVAEGLSHLINKANNNGSLSGF-VCPNGPTISHLLFTDDSVIFCKAEERELLNLKNILKIY
        M CIS+  +S+LING   G    +RGLRQGDPLSPYL +L AE LSHL NKA  + SL G  +    P ++HLLF DDS+ F  A  +    LK+I   Y
Subjt:  MRCISSTEFSILINGERRGNFKSRRGLRQGDPLSPYLLLLVAEGLSHLINKANNNGSLSGF-VCPNGPTISHLLFTDDSVIFCKAEERELLNLKNILKIY

Query:  EIASVESINYSKSAILFPPKLNIDRKVNLSSILGVNGVNNFGNYLGVPSMFSTNKSKDLSFILDKTWKVVQGWKNSFFSIAGRETLIKSVGQTIPSYVMG
        E  S ++IN SKS I F  K+  + K  + ++LG++     G YLG+P  F + K +  ++I+DK  KVV GWK    +  G+E L+KS+   +P + M 
Subjt:  EIASVESINYSKSAILFPPKLNIDRKVNLSSILGVNGVNNFGNYLGVPSMFSTNKSKDLSFILDKTWKVVQGWKNSFFSIAGRETLIKSVGQTIPSYVMG

Query:  VFRFPKNLCNEITRNFARFWWGSSPNKRKVHWVKWDKMCLPKIMGGLNFRDLEGFNKALIAKQVWRILTNPESLVSRFLKSIYFNNTNILEAELGRKPLN
        +FR PK +C EI    ARFWWG+  +K  +HW  W ++C+PK  GGL FRDLE FN+AL+ KQVWRI+ NP  L++R L++ YF + +IL+A L  K   
Subjt:  VFRFPKNLCNEITRNFARFWWGSSPNKRKVHWVKWDKMCLPKIMGGLNFRDLEGFNKALIAKQVWRILTNPESLVSRFLKSIYFNNTNILEAELGRKPLN

Query:  LWRSLIWGRELLLKGLRHRIGNGVDTAMFRDPWLSKKLTFKPTCINWDMINWKVVDFILPSG
         W+S+++G+EL++KG+R+ IGNG  T M+ D WLS      P       I  KV D++L +G
Subjt:  LWRSLIWGRELLLKGLRHRIGNGVDTAMFRDPWLSKKLTFKPTCINWDMINWKVVDFILPSG

TrEMBL top hitse value%identityAlignment
A0A1J3G0X8 Putative mitochondrial protein1.9e-8948.96Show/hide
Query:  MRCISSTEFSILINGERRGNFKSRRGLRQGDPLSPYLLLLVAEGLSHLINKANNNGSLSGF-VCPNGPTISHLLFTDDSVIFCKAEERELLNLKNILKIY
        M CISS  FS+LIN +  G    +RGLRQGDPLS +L +L +EGL+HL+N+A   G +SG      GP I HLLF DDS+  CKA +++   LK ILKIY
Subjt:  MRCISSTEFSILINGERRGNFKSRRGLRQGDPLSPYLLLLVAEGLSHLINKANNNGSLSGF-VCPNGPTISHLLFTDDSVIFCKAEERELLNLKNILKIY

Query:  EIASVESINYSKSAILFPPKLNIDRKVNLSSILGVNGVNNFGNYLGVPSMFSTNKSKDLSFILDKTWKVVQGWKNSFFSIAGRETLIKSVGQTIPSYVMG
           S + IN SKS+I F  K+  ++K  +   LG++     G+YLG+P  FS +K   L ++ ++  K V GW +   S  G+E L+KSV   +P Y M 
Subjt:  EIASVESINYSKSAILFPPKLNIDRKVNLSSILGVNGVNNFGNYLGVPSMFSTNKSKDLSFILDKTWKVVQGWKNSFFSIAGRETLIKSVGQTIPSYVMG

Query:  VFRFPKNLCNEITRNFARFWWGSSPNKRKVHWVKWDKMCLPKIMGGLNFRDLEGFNKALIAKQVWRILTNPESLVSRFLKSIYFNNTNILEAELGRKPLN
         FR PK +C ++    A FWW S  NK+KVHW+ W+KMCLPK +GG+ FRD+E FN+AL+AKQ WRIL + ESL +R LKS YF  T  LEA +G +P  
Subjt:  VFRFPKNLCNEITRNFARFWWGSSPNKRKVHWVKWDKMCLPKIMGGLNFRDLEGFNKALIAKQVWRILTNPESLVSRFLKSIYFNNTNILEAELGRKPLN

Query:  LWRSLIWGRELLLKGLRHRIGNGVDTAMFRDPWLS
         W+S+IWGRELL KGLR R+GNG    ++ DPW+S
Subjt:  LWRSLIWGRELLLKGLRHRIGNGVDTAMFRDPWLS

A0A6D2KLU0 Reverse transcriptase domain-containing protein1.3e-9047.6Show/hide
Query:  MRCISSTEFSILINGERRGNFKSRRGLRQGDPLSPYLLLLVAEGLSHLINKANNNGSLSGF-VCPNGPTISHLLFTDDSVIFCKAEERELLNLKNILKIY
        M C+SS  FS+LIN +  G    +RGLR+GDPLSP+L +L  EGL+HL+N+A   G + G      GP I HLLF DDS+  CKA +++   LK  LKIY
Subjt:  MRCISSTEFSILINGERRGNFKSRRGLRQGDPLSPYLLLLVAEGLSHLINKANNNGSLSGF-VCPNGPTISHLLFTDDSVIFCKAEERELLNLKNILKIY

Query:  EIASVESINYSKSAILFPPKLNIDRKVNLSSILGVNGVNNFGNYLGVPSMFSTNKSKDLSFILDKTWKVVQGWKNSFFSIAGRETLIKSVGQTIPSYVMG
          A+ +++N SKS+I F  K+  D+K+ + + LG++     G YLG+P  FS +K   LS+I D   K +  W +   S  G+E L+KSV   +P Y M 
Subjt:  EIASVESINYSKSAILFPPKLNIDRKVNLSSILGVNGVNNFGNYLGVPSMFSTNKSKDLSFILDKTWKVVQGWKNSFFSIAGRETLIKSVGQTIPSYVMG

Query:  VFRFPKNLCNEITRNFARFWWGSSPNKRKVHWVKWDKMCLPKIMGGLNFRDLEGFNKALIAKQVWRILTNPESLVSRFLKSIYFNNTNILEAELGRKPLN
         F+ PK LC ++    A FWW S  +KRK HW+ W++MCLPK MGG+ FRD+E FN+AL+AKQ W++L  PESL+ +FLKS YF++T+ LE+ +G +P  
Subjt:  VFRFPKNLCNEITRNFARFWWGSSPNKRKVHWVKWDKMCLPKIMGGLNFRDLEGFNKALIAKQVWRILTNPESLVSRFLKSIYFNNTNILEAELGRKPLN

Query:  LWRSLIWGRELLLKGLRHRIGNGVDTAMFRDPWL
         WRS+IWGRELL+KGLR R+GNG    ++ DPW+
Subjt:  LWRSLIWGRELLLKGLRHRIGNGVDTAMFRDPWL

A0A6D2LAL0 Reverse transcriptase domain-containing protein5.6e-8945.21Show/hide
Query:  MRCISSTEFSILINGERRGNFKSRRGLRQGDPLSPYLLLLVAEGLSHLINKANNNGSLSGF-VCPNGPTISHLLFTDDSVIFCKAEERELLNLKNILKIY
        M CI++  +S+LIN +  G    +RGLRQGDPLSP+L +L  EGL+HL+N+A   G + G      GP + HLLF DDS+  CKA +++   LK ILKIY
Subjt:  MRCISSTEFSILINGERRGNFKSRRGLRQGDPLSPYLLLLVAEGLSHLINKANNNGSLSGF-VCPNGPTISHLLFTDDSVIFCKAEERELLNLKNILKIY

Query:  EIASVESINYSKSAILFPPKLNIDRKVNLSSILGVNGVNNFGNYLGVPSMFSTNKSKDLSFILDKTWKVVQGWKNSFFSIAGRETLIKSVGQTIPSYVMG
           + + IN+SKS+I F  K++ D++  +  ++G+      G+YLG+P  FS +K + L ++ ++    V GW +   S  G+ETL+KSV   +P Y M 
Subjt:  EIASVESINYSKSAILFPPKLNIDRKVNLSSILGVNGVNNFGNYLGVPSMFSTNKSKDLSFILDKTWKVVQGWKNSFFSIAGRETLIKSVGQTIPSYVMG

Query:  VFRFPKNLCNEITRNFARFWWGSSPNKRKVHWVKWDKMCLPKIMGGLNFRDLEGFNKALIAKQVWRILTNPESLVSRFLKSIYFNNTNILEAELGRKPLN
         F+ PK +C ++    A FWW S  NK+ VHW+ W+KMCLPK +GG+ FRD+E FN+AL+AKQ WRIL  PESLV+R L+S YF   + +++++G +P  
Subjt:  VFRFPKNLCNEITRNFARFWWGSSPNKRKVHWVKWDKMCLPKIMGGLNFRDLEGFNKALIAKQVWRILTNPESLVSRFLKSIYFNNTNILEAELGRKPLN

Query:  LWRSLIWGRELLLKGLRHRIGNGVDTAMFRDPWL
         W S++WGRELL KGLR R+GNG+   ++ DPW+
Subjt:  LWRSLIWGRELLLKGLRHRIGNGVDTAMFRDPWL

A0A803NXV2 Uncharacterized protein6.2e-8845.61Show/hide
Query:  MRCISSTEFSILINGERRGNFKSRRGLRQGDPLSPYLLLLVAEGLSHLINKANNNGSLSGFVCP-NGPTISHLLFTDDSVIFCKAEERELLNLKNILKIY
        M C+++ E+  L+NG  RG+    RGLRQG PLSPYL L  AE LS L+ +A  +G L GF C  +GP +SHL F DDS+IF +A  RE  +++ IL+ Y
Subjt:  MRCISSTEFSILINGERRGNFKSRRGLRQGDPLSPYLLLLVAEGLSHLINKANNNGSLSGFVCP-NGPTISHLLFTDDSVIFCKAEERELLNLKNILKIY

Query:  EIASVESINYSKSAILFPPKLNIDRKVNLSSILGVNGVNNFGNYLGVPSMFSTNKSKDLSFILDKTWKVVQGWKNSFFSIAGRETLIKSVGQTIPSYVMG
        E AS + +N+ KSAI F P +    + ++  ILG+  V     YLG+P++   NK +  + I DK  K ++GWK SFFS  GRE LIK++ Q +P+Y+M 
Subjt:  EIASVESINYSKSAILFPPKLNIDRKVNLSSILGVNGVNNFGNYLGVPSMFSTNKSKDLSFILDKTWKVVQGWKNSFFSIAGRETLIKSVGQTIPSYVMG

Query:  VFRFPKNLCNEITRNFARFWWGSSPNKRKVHWVKWDKMCLPKIMGGLNFRDLEGFNKALIAKQVWRILTNPESLVSRFLKSIYFNNTNILEAELGRKPLN
        +F+ P   C+++     +FWWG++ +KRK+ WVKW+ +C PK  GGL F+DL  FN+A++AKQVWR++ +P SL +R LK  YF NT+IL+A+  +   +
Subjt:  VFRFPKNLCNEITRNFARFWWGSSPNKRKVHWVKWDKMCLPKIMGGLNFRDLEGFNKALIAKQVWRILTNPESLVSRFLKSIYFNNTNILEAELGRKPLN

Query:  LWRSLIWGRELLLKGLRHRIGNGVDTAMFRDPWLSKKLTFKP
        LW SLIWG +LL  GLR  +G+G     FRDPW+ + ++F+P
Subjt:  LWRSLIWGRELLLKGLRHRIGNGVDTAMFRDPWLSKKLTFKP

A0A803PWX1 Uncharacterized protein1.0e-9048.39Show/hide
Query:  MRCISSTEFSILINGERRGNFKSRRGLRQGDPLSPYLLLLVAEGLSHLINKANNNGSLSGF-VCPNGPTISHLLFTDDSVIFCKAEERELLNLKNILKIY
        MRC++S +FS LINGE +G    +RGLRQGDPLSP+L LL AE  S LI  A ++G L G      G ++SHL F DDS++F  A E E    K +L+ Y
Subjt:  MRCISSTEFSILINGERRGNFKSRRGLRQGDPLSPYLLLLVAEGLSHLINKANNNGSLSGF-VCPNGPTISHLLFTDDSVIFCKAEERELLNLKNILKIY

Query:  EIASVESINYSKSAILFPPKLNIDRKVNLSSILGVNGVNNFGNYLGVPSMFSTNKSKDLSFILDKTWKVVQGWKNSFFSIAGRETLIKSVGQTIPSYVMG
          AS + +N+ KS + F  K+ +  + +L++I+GV  V+N+G YLG+PS     K +   FI +K W  ++GWK SFFS AG+E LIK+V Q IP+Y M 
Subjt:  EIASVESINYSKSAILFPPKLNIDRKVNLSSILGVNGVNNFGNYLGVPSMFSTNKSKDLSFILDKTWKVVQGWKNSFFSIAGRETLIKSVGQTIPSYVMG

Query:  VFRFPKNLCNEITRNFARFWWGSSPNKRKVHWVKWDKMCLPKIMGGLNFRDLEGFNKALIAKQVWRILTNPESLVSRFLKSIYFNNTNILEAELGRKPLN
         FR PK   N I    ARFWWGSS    K+HW KWD +C  K  GGL FRDL  FN+AL+AKQVWR +  P SL SR LK+ Y+ N  ++EA+ G     
Subjt:  VFRFPKNLCNEITRNFARFWWGSSPNKRKVHWVKWDKMCLPKIMGGLNFRDLEGFNKALIAKQVWRILTNPESLVSRFLKSIYFNNTNILEAELGRKPLN

Query:  LWRSLIWGRELLLKGLRHRIGNGVDTAMFRDPWLSKKLTFK
        +WRSL+WG++++ KG R RIGNG    +  DPWL + +TFK
Subjt:  LWRSLIWGRELLLKGLRHRIGNGVDTAMFRDPWLSKKLTFK

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657501.6e-2132.79Show/hide
Query:  ILDKTWKVVQGWKNSFFSIAGRETLIKSVGQTIPSYVMGVFRFPKNLCNEITRNFARFWWGSSPNKRKVHWVKWDKMCLPKIMGGLNFRDLEGFNKALIA
        IL++    + GW+    S AGR TL K+V  ++P + M     P+++ N + +    F WGS+  K+K H VKW K+C PK  GGL  R  +  N+ALI+
Subjt:  ILDKTWKVVQGWKNSFFSIAGRETLIKSVGQTIPSYVMGVFRFPKNLCNEITRNFARFWWGSSPNKRKVHWVKWDKMCLPKIMGGLNFRDLEGFNKALIA

Query:  KQVWRILTNPESLVSRFLKSIYFNNTNILEAELGRKPL------NLWRSLIWG-RELLLKGLRHRIGNGVDTAMFRDPWLSKK
        K  WR+L    SL +  L+  Y    ++ E    R  +      + WRS+  G R+++  G+    G+G     + D W+S K
Subjt:  KQVWRILTNPESLVSRFLKSIYFNNTNILEAELGRKPL------NLWRSLIWG-RELLLKGLRHRIGNGVDTAMFRDPWLSKK

P11369 LINE-1 retrotransposable element ORF2 protein2.9e-1025.65Show/hide
Query:  SILINGERRGNFKSRRGLRQGDPLSPYLLLLVAEGLSHLINKANNNGSLSGFVCPNGPTISHLLFTDDSVIFC---KAEERELLNLKNILKIYEIASVES
        +I +NGE+      + G RQG PLSPYL  +V E L+  I +      + G +      +   L  DD +++    K   RELLNL N     E+   + 
Subjt:  SILINGERRGNFKSRRGLRQGDPLSPYLLLLVAEGLSHLINKANNNGSLSGFVCPNGPTISHLLFTDDSVIFC---KAEERELLNLKNILKIYEIASVES

Query:  INYSKS-AILFPPKLNIDRKVNLSSILGVNGVNNFGNYLGVPSMFSTNKSKDLSFILDKTWKV--------VQGWKNSFFSIAGRETLIKS--VGQTIPS
        IN +KS A L+      ++++  ++   +  V N   YLGV        +K++  + DK +K         ++ WK+   S  GR  ++K   + + I  
Subjt:  INYSKS-AILFPPKLNIDRKVNLSSILGVNGVNNFGNYLGVPSMFSTNKSKDLSFILDKTWKV--------VQGWKNSFFSIAGRETLIKS--VGQTIPS

Query:  YVMGVFRFPKNLCNEITRNFARFWWGSSPNKRKVHWVKWDKMCLPKIMGGLNFRDLEGFNKALIAKQVW
        +     + P    NE+     +F W +   +     +K DK    +  GG+   DL+ + +A++ K  W
Subjt:  YVMGVFRFPKNLCNEITRNFARFWWGSSPNKRKVHWVKWDKMCLPKIMGGLNFRDLEGFNKALIAKQVW

P92555 Uncharacterized mitochondrial protein AtMg012501.0e-1052.94Show/hide
Query:  LINGERRGNFKSRRGLRQGDPLSPYLLLLVAEGLSHLINKANNNGSLSGF-VCPNGPTISHLLFTDDS
        +ING  +G     RGLRQGDPLSPYL +L  E LS L  +A   G L G  V  N P I+HLLF DD+
Subjt:  LINGERRGNFKSRRGLRQGDPLSPYLLLLVAEGLSHLINKANNNGSLSGF-VCPNGPTISHLLFTDDS

P93295 Uncharacterized mitochondrial protein AtMg003103.4e-3545.33Show/hide
Query:  IPSYVMGVFRFPKNLCNEITRNFARFWWGSSPNKRKVHWVKWDKMCLPK-IMGGLNFRDLEGFNKALIAKQVWRILTNPESLVSRFLKSIYFNNTNILEA
        +P Y M  FR  K LC ++T     FWW S  NKRK+ WV W K+C  K   GGL FRDL  FN+AL+AKQ +RI+  P +L+SR L+S YF +++++E 
Subjt:  IPSYVMGVFRFPKNLCNEITRNFARFWWGSSPNKRKVHWVKWDKMCLPK-IMGGLNFRDLEGFNKALIAKQVWRILTNPESLVSRFLKSIYFNNTNILEA

Query:  ELGRKPLNLWRSLIWGRELLLKGLRHRIGNGVDTAMFRDPWLSKKLTFKP
         +G +P   WRS+I GRELL +GL   IG+G+ T ++ D W+  +    P
Subjt:  ELGRKPLNLWRSLIWGRELLLKGLRHRIGNGVDTAMFRDPWLSKKLTFKP

Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein5.6e-3340.28Show/hide
Query:  IPSYVMGVFRFPKNLCNEITRNFARFWWGSSPNKRKVHWVKWDKMCLPKIMGGLNFRDLEGFNKALIAKQVWRILTNPESLVSRFLKSIYFNNTNILEAE
        +P+Y M  F  PK +C +I    A FWW +    + +HW  WD +   K  GG+ F+D+E FN AL+ KQ+WR+L+ PESL+++  KS YF+ ++ L A 
Subjt:  IPSYVMGVFRFPKNLCNEITRNFARFWWGSSPNKRKVHWVKWDKMCLPKIMGGLNFRDLEGFNKALIAKQVWRILTNPESLVSRFLKSIYFNNTNILEAE

Query:  LGRKPLNLWRSLIWGRELLLKGLRHRIGNGVDTAMFRDPWLSKK
        LG +P  +W+S+   +E+L +G R  +GNG D  ++R  WL  K
Subjt:  LGRKPLNLWRSLIWGRELLLKGLRHRIGNGVDTAMFRDPWLSKK

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.4e-3645.33Show/hide
Query:  IPSYVMGVFRFPKNLCNEITRNFARFWWGSSPNKRKVHWVKWDKMCLPK-IMGGLNFRDLEGFNKALIAKQVWRILTNPESLVSRFLKSIYFNNTNILEA
        +P Y M  FR  K LC ++T     FWW S  NKRK+ WV W K+C  K   GGL FRDL  FN+AL+AKQ +RI+  P +L+SR L+S YF +++++E 
Subjt:  IPSYVMGVFRFPKNLCNEITRNFARFWWGSSPNKRKVHWVKWDKMCLPK-IMGGLNFRDLEGFNKALIAKQVWRILTNPESLVSRFLKSIYFNNTNILEA

Query:  ELGRKPLNLWRSLIWGRELLLKGLRHRIGNGVDTAMFRDPWLSKKLTFKP
         +G +P   WRS+I GRELL +GL   IG+G+ T ++ D W+  +    P
Subjt:  ELGRKPLNLWRSLIWGRELLLKGLRHRIGNGVDTAMFRDPWLSKKLTFKP

ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase)7.1e-1252.94Show/hide
Query:  LINGERRGNFKSRRGLRQGDPLSPYLLLLVAEGLSHLINKANNNGSLSGF-VCPNGPTISHLLFTDDS
        +ING  +G     RGLRQGDPLSPYL +L  E LS L  +A   G L G  V  N P I+HLLF DD+
Subjt:  LINGERRGNFKSRRGLRQGDPLSPYLLLLVAEGLSHLINKANNNGSLSGF-VCPNGPTISHLLFTDDS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATGCATATCTTCGACTGAATTTTCTATTCTAATTAATGGGGAAAGAAGAGGCAATTTTAAATCTAGGAGAGGCCTTCGTCAAGGTGATCCTCTATCTCCATATTT
GCTCTTATTAGTGGCTGAAGGTCTATCTCACTTAATAAATAAGGCTAATAATAATGGTAGTTTATCAGGCTTTGTTTGCCCCAATGGTCCGACTATTTCCCATTTATTAT
TCACGGATGATAGTGTAATCTTCTGTAAAGCTGAGGAAAGGGAATTATTAAATTTGAAGAATATCTTAAAGATCTATGAGATTGCTTCAGTGGAATCGATTAACTATTCT
AAATCTGCTATACTTTTCCCTCCCAAGTTGAATATTGATAGGAAGGTTAATCTTAGTAGTATTTTAGGAGTCAACGGTGTGAATAACTTTGGTAATTACTTAGGTGTTCC
TTCCATGTTTTCTACAAATAAATCTAAGGATCTTAGTTTTATTTTAGATAAAACCTGGAAAGTTGTTCAAGGGTGGAAGAATTCTTTTTTCTCTATAGCGGGTAGGGAAA
CATTAATTAAAAGTGTAGGCCAAACGATCCCCTCATATGTTATGGGTGTTTTTAGGTTCCCTAAGAATCTATGTAATGAGATAACTAGAAATTTTGCTAGGTTCTGGTGG
GGATCTAGCCCTAATAAGAGAAAAGTCCATTGGGTTAAGTGGGACAAAATGTGTCTTCCTAAAATTATGGGGGGTCTTAATTTTAGAGATCTAGAAGGCTTTAATAAGGC
TTTAATAGCCAAGCAAGTTTGGAGGATTTTGACAAACCCAGAATCCCTAGTCTCTAGATTTCTGAAAAGCATTTACTTTAATAATACCAATATTCTTGAGGCAGAATTAG
GAAGGAAACCCTTAAACCTTTGGAGAAGTCTTATATGGGGTAGAGAACTCCTCCTAAAAGGTCTTAGACATAGAATAGGTAATGGGGTAGACACTGCTATGTTCAGGGAT
CCTTGGTTATCAAAAAAATTAACCTTCAAACCTACTTGTATTAACTGGGATATGATTAATTGGAAGGTGGTTGATTTCATTCTACCCTCGGGGGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGATGCATATCTTCGACTGAATTTTCTATTCTAATTAATGGGGAAAGAAGAGGCAATTTTAAATCTAGGAGAGGCCTTCGTCAAGGTGATCCTCTATCTCCATATTT
GCTCTTATTAGTGGCTGAAGGTCTATCTCACTTAATAAATAAGGCTAATAATAATGGTAGTTTATCAGGCTTTGTTTGCCCCAATGGTCCGACTATTTCCCATTTATTAT
TCACGGATGATAGTGTAATCTTCTGTAAAGCTGAGGAAAGGGAATTATTAAATTTGAAGAATATCTTAAAGATCTATGAGATTGCTTCAGTGGAATCGATTAACTATTCT
AAATCTGCTATACTTTTCCCTCCCAAGTTGAATATTGATAGGAAGGTTAATCTTAGTAGTATTTTAGGAGTCAACGGTGTGAATAACTTTGGTAATTACTTAGGTGTTCC
TTCCATGTTTTCTACAAATAAATCTAAGGATCTTAGTTTTATTTTAGATAAAACCTGGAAAGTTGTTCAAGGGTGGAAGAATTCTTTTTTCTCTATAGCGGGTAGGGAAA
CATTAATTAAAAGTGTAGGCCAAACGATCCCCTCATATGTTATGGGTGTTTTTAGGTTCCCTAAGAATCTATGTAATGAGATAACTAGAAATTTTGCTAGGTTCTGGTGG
GGATCTAGCCCTAATAAGAGAAAAGTCCATTGGGTTAAGTGGGACAAAATGTGTCTTCCTAAAATTATGGGGGGTCTTAATTTTAGAGATCTAGAAGGCTTTAATAAGGC
TTTAATAGCCAAGCAAGTTTGGAGGATTTTGACAAACCCAGAATCCCTAGTCTCTAGATTTCTGAAAAGCATTTACTTTAATAATACCAATATTCTTGAGGCAGAATTAG
GAAGGAAACCCTTAAACCTTTGGAGAAGTCTTATATGGGGTAGAGAACTCCTCCTAAAAGGTCTTAGACATAGAATAGGTAATGGGGTAGACACTGCTATGTTCAGGGAT
CCTTGGTTATCAAAAAAATTAACCTTCAAACCTACTTGTATTAACTGGGATATGATTAATTGGAAGGTGGTTGATTTCATTCTACCCTCGGGGGACTGA
Protein sequenceShow/hide protein sequence
MRCISSTEFSILINGERRGNFKSRRGLRQGDPLSPYLLLLVAEGLSHLINKANNNGSLSGFVCPNGPTISHLLFTDDSVIFCKAEERELLNLKNILKIYEIASVESINYS
KSAILFPPKLNIDRKVNLSSILGVNGVNNFGNYLGVPSMFSTNKSKDLSFILDKTWKVVQGWKNSFFSIAGRETLIKSVGQTIPSYVMGVFRFPKNLCNEITRNFARFWW
GSSPNKRKVHWVKWDKMCLPKIMGGLNFRDLEGFNKALIAKQVWRILTNPESLVSRFLKSIYFNNTNILEAELGRKPLNLWRSLIWGRELLLKGLRHRIGNGVDTAMFRD
PWLSKKLTFKPTCINWDMINWKVVDFILPSGD