; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0008601 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008601
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr9:26252947..26253534
RNA-Seq ExpressionLag0008601
SyntenyLag0008601
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EPS72636.1 hypothetical protein M569_02121, partial [Genlisea aurea]1.8e-1935.2Show/hide
Query:  MDSFIDVINSCDLIDPGYSGGKFTWRKKKHDPSSVKERLDRFLINRELIQSFKHIKVQHLSFSSSDHRPILATL-DGDKQKTPRKRRRAKKFEDSWINFS
        M  F + +  CDL D G+ G  FTW   +  PS+VK RLDRF+ N   I    H  V HL F  SDH PIL    D     T  +R+R  KFE  W    
Subjt:  MDSFIDVINSCDLIDPGYSGGKFTWRKKKHDPSSVKERLDRFLINRELIQSFKHIKVQHLSFSSSDHRPILATL-DGDKQKTPRKRRRAKKFEDSWINFS

Query:  ECRKIVEETWTKERER--EPTSIHKRINLCPSKLYSWNKEKLRGSLKNAIDCKKDELTKMENGNSVDS-AYLIVQVEKDIKNLLIEEERYWKIRSR
         CR I++  W   R       S+ +R+  C  KL  W++  + GSL++ I   +D L+ +  G   DS    I  ++  +  LL  +E +WK RS+
Subjt:  ECRKIVEETWTKERER--EPTSIHKRINLCPSKLYSWNKEKLRGSLKNAIDCKKDELTKMENGNSVDS-AYLIVQVEKDIKNLLIEEERYWKIRSR

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]1.4e-2737.89Show/hide
Query:  MDSFIDVINSCDLIDPGYSGGKFTWRKKKHDPSSVKERLDRFLINRELIQSFKHIKVQHLSFSSSDHRPILATLDGDKQKT--PRKRRRAKKFEDSWINF
        M +F D ++ C L+DPG+ G  FTW         + ERLDRFLIN  + Q  + ++++HL F +SDHRPILA   G  + T   RK RR  +FE+ W +F
Subjt:  MDSFIDVINSCDLIDPGYSGGKFTWRKKKHDPSSVKERLDRFLINRELIQSFKHIKVQHLSFSSSDHRPILATLDGDKQKT--PRKRRRAKKFEDSWINF

Query:  SECRKIVEETWTKEREREPTSIHKRINLCPSKLYSWNKEKLRGSLKNAIDCKKDELTKMENGNSVDSAYLIVQVEKDIKNLLIEEERYWK
         EC++IV   W  + +   T    +IN C  +L  WN  +L GSL+ AI  K+ E+ +M    +      + + ++D++ LL EEE YW+
Subjt:  SECRKIVEETWTKEREREPTSIHKRINLCPSKLYSWNKEKLRGSLKNAIDCKKDELTKMENGNSVDSAYLIVQVEKDIKNLLIEEERYWK

XP_023884738.1 uncharacterized protein LOC111996934 [Quercus suber]1.4e-1933.67Show/hide
Query:  MDSFIDVINSCDLIDPGYSGGKFTWRKKKHDPSSVKERLDRFLINRELIQSFKHIKVQHLSFSSSDHRPILATLDGDKQKTPRKRRRAKKFEDSWINFSE
        +D+F   + SC L D GY+G  FTW  ++   ++ K RLDR + N+E I  F+  K  HLS  +SDH PIL  +   +   P++R R  KFE+SW+   +
Subjt:  MDSFIDVINSCDLIDPGYSGGKFTWRKKKHDPSSVKERLDRFLINRELIQSFKHIKVQHLSFSSSDHRPILATLDGDKQKTPRKRRRAKKFEDSWINFSE

Query:  CRKIVEETWTKER--EREPTSIHKRINLCPSKLYSWNKEKLRGSLK--NAIDCKKDELTKMENGNSVDSAYLIVQVEKDIKNLLIEEERYWKIRSR
        C   V E W  E   E+   S  K+I +C S+L  W   +     +    I  + D L + E  +   + YL  ++ K +  LL ++E YW  +SR
Subjt:  CRKIVEETWTKER--EREPTSIHKRINLCPSKLYSWNKEKLRGSLK--NAIDCKKDELTKMENGNSVDSAYLIVQVEKDIKNLLIEEERYWKIRSR

XP_030479239.1 uncharacterized protein LOC115696480 [Cannabis sativa]1.4e-1933.67Show/hide
Query:  MDSFIDVINSCDLIDPGYSGGKFTWRKKKHDPSSVKERLDRFLINRELIQSFKHIKVQHLSFSSSDHRPILATLDGDKQKTPRKRRRAK-KFEDSWINFS
        M+ F   I+ C +    Y+G KFTW  K ++   VKERLDR  IN +  + F   ++ HL + SSDHR I   +    Q  P  R R + +FE  W+   
Subjt:  MDSFIDVINSCDLIDPGYSGGKFTWRKKKHDPSSVKERLDRFLINRELIQSFKHIKVQHLSFSSSDHRPILATLDGDKQKTPRKRRRAK-KFEDSWINFS

Query:  ECRKIVEETWTKEREREP-TSIHKRINLCPSKLYSWNKEKLRGSLKNAIDCKKDELTKMENGN--SVDSAYLIVQVEKDIKNLLIEEERYWKIRSR
        ECR ++   W      +P  S+ + IN C + L +W+  K  G +K+ I+  + +  +M N +  S D    +V  EK + +LL +EE YW+ R+R
Subjt:  ECRKIVEETWTKEREREP-TSIHKRINLCPSKLYSWNKEKLRGSLKNAIDCKKDELTKMENGN--SVDSAYLIVQVEKDIKNLLIEEERYWKIRSR

XP_030940012.1 uncharacterized protein LOC115964925 [Quercus lobata]9.4e-2137.11Show/hide
Query:  MDSFIDVINSCDLIDPGYSGGKFTWRKKKHDPSSVKERLDRFLINRELIQSFKHIKVQHLSFSSSDHRPILATLDGDKQKTPRKRRRAKKFEDSWINFSE
        M  F DVI+ C  +D G+ G KFTW K   D  S++ RLDR +      Q F   +V HLS  SSDH P+L  L G  +  PRK +R  +FE+ W++   
Subjt:  MDSFIDVINSCDLIDPGYSGGKFTWRKKKHDPSSVKERLDRFLINRELIQSFKHIKVQHLSFSSSDHRPILATLDGDKQKTPRKRRRAKKFEDSWINFSE

Query:  CRKIVEETWTKEREREP-TSIHKRINLCPSKLYSWNKEKLRGSLKNAIDCKKDELTKMENGNSVDSAYLIVQVEKDIKNLLIE-EERYWKIRSR
          ++VEE W+  R+  P T+I K++  C   L  WNK    G ++  ++ KK++L   EN   V      V+  +   NLL + E R W  RSR
Subjt:  CRKIVEETWTKEREREP-TSIHKRINLCPSKLYSWNKEKLRGSLKNAIDCKKDELTKMENGNSVDSAYLIVQVEKDIKNLLIE-EERYWKIRSR

TrEMBL top hitse value%identityAlignment
A0A2N9GII4 Uncharacterized protein1.0e-2032.99Show/hide
Query:  MDSFIDVINSCDLIDPGYSGGKFTWRKKKHDPSSVKERLDRFLINRELIQSFKHIKVQHLSFSSSDHRPILATLDGDKQKTPRKRRRAKKFEDSWINFSE
        M  F +V+N C  +D GY G KFTW   +   + VKERLDR +        F  I V HL  S SDH PIL      + +T R +RR  +FE+ W    +
Subjt:  MDSFIDVINSCDLIDPGYSGGKFTWRKKKHDPSSVKERLDRFLINRELIQSFKHIKVQHLSFSSSDHRPILATLDGDKQKTPRKRRRAKKFEDSWINFSE

Query:  CRKIVEETWTKE-REREPT-SIHKRINLCPSKLYSWNKEKLRGSLKNAIDCKKDELTKMENGNSVDSAYLIVQVEKDIKNLLIEEERYWKIRSR
        C  ++   W +E  E  P   + ++I  C   L  W+K+   GS ++ I  + + +  + N +   +  LI  ++++I +LL+ +E +WK RSR
Subjt:  CRKIVEETWTKE-REREPT-SIHKRINLCPSKLYSWNKEKLRGSLKNAIDCKKDELTKMENGNSVDSAYLIVQVEKDIKNLLIEEERYWKIRSR

A0A2N9HE04 Reverse transcriptase domain-containing protein1.0e-2032.99Show/hide
Query:  MDSFIDVINSCDLIDPGYSGGKFTWRKKKHDPSSVKERLDRFLINRELIQSFKHIKVQHLSFSSSDHRPILATLDGDKQKTPRKRRRAKKFEDSWINFSE
        M  F +V+N C  +D GY G KFTW   +   + VKERLDR +        F  I V HL  S SDH PIL      + +T R +RR  +FE+ W    +
Subjt:  MDSFIDVINSCDLIDPGYSGGKFTWRKKKHDPSSVKERLDRFLINRELIQSFKHIKVQHLSFSSSDHRPILATLDGDKQKTPRKRRRAKKFEDSWINFSE

Query:  CRKIVEETWTKE-REREPT-SIHKRINLCPSKLYSWNKEKLRGSLKNAIDCKKDELTKMENGNSVDSAYLIVQVEKDIKNLLIEEERYWKIRSR
        C  ++   W +E  E  P   + ++I  C   L  W+K+   GS ++ I  + + +  + N +   +  LI  ++++I +LL+ +E +WK RSR
Subjt:  CRKIVEETWTKE-REREPT-SIHKRINLCPSKLYSWNKEKLRGSLKNAIDCKKDELTKMENGNSVDSAYLIVQVEKDIKNLLIEEERYWKIRSR

A0A2N9IBV7 Reverse transcriptase domain-containing protein7.8e-2133.85Show/hide
Query:  MDSFIDVINSCDLIDPGYSGGKFTWRKKKHDPSSVKERLDRFLINRELIQSFKHIKVQHLSFSSSDHRPILATLDGDKQKTPRKRRRAKKFEDSWINFSE
        M  F DV+N C LID G+ G  FTW  ++   + +++RLDR L N   +  F    V H+  S SDH P+L  +D   +   + +RR +KFE+ W    E
Subjt:  MDSFIDVINSCDLIDPGYSGGKFTWRKKKHDPSSVKERLDRFLINRELIQSFKHIKVQHLSFSSSDHRPILATLDGDKQKTPRKRRRAKKFEDSWINFSE

Query:  CRKIVEETWTKERE-REPTSI-HKRINLCPSKLYSWNKEKLRGSLKNAIDCKKDELTKMENGNSV-DSAYLIVQVEKDIKNLLIEEERYWKIRSR
        C  I+++ W++E     P  I  ++I  C   LY W K+ + G  +N I      LT + + N V  +   I  ++ +I  LL+ EE +W+ RSR
Subjt:  CRKIVEETWTKERE-REPTSI-HKRINLCPSKLYSWNKEKLRGSLKNAIDCKKDELTKMENGNSV-DSAYLIVQVEKDIKNLLIEEERYWKIRSR

A0A2N9IJF6 Uncharacterized protein1.0e-2032.99Show/hide
Query:  MDSFIDVINSCDLIDPGYSGGKFTWRKKKHDPSSVKERLDRFLINRELIQSFKHIKVQHLSFSSSDHRPILATLDGDKQKTPRKRRRAKKFEDSWINFSE
        M  F +V+N C  +D GY G KFTW   +   + VKERLDR +        F  I V HL  S SDH PIL      + +T R +RR  +FE+ W    +
Subjt:  MDSFIDVINSCDLIDPGYSGGKFTWRKKKHDPSSVKERLDRFLINRELIQSFKHIKVQHLSFSSSDHRPILATLDGDKQKTPRKRRRAKKFEDSWINFSE

Query:  CRKIVEETWTKE-REREPT-SIHKRINLCPSKLYSWNKEKLRGSLKNAIDCKKDELTKMENGNSVDSAYLIVQVEKDIKNLLIEEERYWKIRSR
        C  ++   W +E  E  P   + ++I  C   L  W+K+   GS ++ I  + + +  + N +   +  LI  ++++I +LL+ +E +WK RSR
Subjt:  CRKIVEETWTKE-REREPT-SIHKRINLCPSKLYSWNKEKLRGSLKNAIDCKKDELTKMENGNSVDSAYLIVQVEKDIKNLLIEEERYWKIRSR

A0A6J1DRA0 uncharacterized protein LOC1110224236.6e-2837.89Show/hide
Query:  MDSFIDVINSCDLIDPGYSGGKFTWRKKKHDPSSVKERLDRFLINRELIQSFKHIKVQHLSFSSSDHRPILATLDGDKQKT--PRKRRRAKKFEDSWINF
        M +F D ++ C L+DPG+ G  FTW         + ERLDRFLIN  + Q  + ++++HL F +SDHRPILA   G  + T   RK RR  +FE+ W +F
Subjt:  MDSFIDVINSCDLIDPGYSGGKFTWRKKKHDPSSVKERLDRFLINRELIQSFKHIKVQHLSFSSSDHRPILATLDGDKQKT--PRKRRRAKKFEDSWINF

Query:  SECRKIVEETWTKEREREPTSIHKRINLCPSKLYSWNKEKLRGSLKNAIDCKKDELTKMENGNSVDSAYLIVQVEKDIKNLLIEEERYWK
         EC++IV   W  + +   T    +IN C  +L  WN  +L GSL+ AI  K+ E+ +M    +      + + ++D++ LL EEE YW+
Subjt:  SECRKIVEETWTKEREREPTSIHKRINLCPSKLYSWNKEKLRGSLKNAIDCKKDELTKMENGNSVDSAYLIVQVEKDIKNLLIEEERYWK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGTTTTATTGATGTGATAAATTCCTGTGACCTCATCGACCCAGGGTATTCGGGTGGGAAGTTTACGTGGAGGAAAAAGAAGCATGATCCCTCGAGTGTTAAAGA
AAGATTGGACAGATTCCTCATTAATAGGGAATTAATCCAATCGTTCAAGCATATAAAGGTTCAGCATTTAAGCTTTAGCTCCTCGGATCATAGACCAATTTTGGCAACCC
TGGATGGGGACAAACAGAAGACCCCCAGGAAAAGAAGAAGAGCTAAAAAATTTGAAGACTCTTGGATCAATTTTTCTGAGTGTAGGAAAATCGTGGAAGAAACTTGGACA
AAAGAGAGGGAAAGGGAGCCAACTAGTATTCATAAAAGAATTAACCTCTGCCCTTCCAAGCTTTATTCATGGAACAAGGAAAAGCTCAGGGGATCTTTGAAGAATGCTAT
AGACTGCAAGAAGGATGAGCTCACAAAGATGGAAAATGGCAATTCAGTCGATTCGGCCTATCTCATAGTTCAAGTAGAAAAAGACATCAAAAATCTGTTGATTGAGGAGG
AAAGATATTGGAAAATCCGCTCTAGGGGGAATGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATAGTTTTATTGATGTGATAAATTCCTGTGACCTCATCGACCCAGGGTATTCGGGTGGGAAGTTTACGTGGAGGAAAAAGAAGCATGATCCCTCGAGTGTTAAAGA
AAGATTGGACAGATTCCTCATTAATAGGGAATTAATCCAATCGTTCAAGCATATAAAGGTTCAGCATTTAAGCTTTAGCTCCTCGGATCATAGACCAATTTTGGCAACCC
TGGATGGGGACAAACAGAAGACCCCCAGGAAAAGAAGAAGAGCTAAAAAATTTGAAGACTCTTGGATCAATTTTTCTGAGTGTAGGAAAATCGTGGAAGAAACTTGGACA
AAAGAGAGGGAAAGGGAGCCAACTAGTATTCATAAAAGAATTAACCTCTGCCCTTCCAAGCTTTATTCATGGAACAAGGAAAAGCTCAGGGGATCTTTGAAGAATGCTAT
AGACTGCAAGAAGGATGAGCTCACAAAGATGGAAAATGGCAATTCAGTCGATTCGGCCTATCTCATAGTTCAAGTAGAAAAAGACATCAAAAATCTGTTGATTGAGGAGG
AAAGATATTGGAAAATCCGCTCTAGGGGGAATGGCTAA
Protein sequenceShow/hide protein sequence
MDSFIDVINSCDLIDPGYSGGKFTWRKKKHDPSSVKERLDRFLINRELIQSFKHIKVQHLSFSSSDHRPILATLDGDKQKTPRKRRRAKKFEDSWINFSECRKIVEETWT
KEREREPTSIHKRINLCPSKLYSWNKEKLRGSLKNAIDCKKDELTKMENGNSVDSAYLIVQVEKDIKNLLIEEERYWKIRSRGNG