; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0008602 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008602
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr9:26254738..26255526
RNA-Seq ExpressionLag0008602
SyntenyLag0008602
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG48193.1 hypothetical protein EZV62_027487 [Acer yangbiense]2.1e-3133.5Show/hide
Query:  ERAKVVGIEDEDLNEANEDLQGGILWRILTTELINPGVFKTFMAKIWNKEGRVRIKAKGRNTFFCQFNNHHEKERIKRGGLWNYDKSLMVIEEAQGASRI
        E A V  I ++ + + +ED+   ++ ++LT + +N   FK  + +IWN+ G+V ++  G NTF   F N   + ++   G W + KSL+V+E+ +G   I
Subjt:  ERAKVVGIEDEDLNEANEDLQGGILWRILTTELINPGVFKTFMAKIWNKEGRVRIKAKGRNTFFCQFNNHHEKERIKRGGLWNYDKSLMVIEEAQGASRI

Query:  SRIEFRYVSFWVHIHDLPTVCMRRKWAVELDNSLGDFEEVNLDEERGSGENTLRLQVKIDITQSLKRGLMVRIRSKAEETWLKVTYERLPELCYGCGMVG
        ++++F    FWV IHD+P +CM ++    L   +G+  E+   E R      +R++V++DIT+ LKR L +++    E T + + YERLP+ C+ CG +G
Subjt:  SRIEFRYVSFWVHIHDLPTVCMRRKWAVELDNSLGDFEEVNLDEERGSGENTLRLQVKIDITQSLKRGLMVRIRSKAEETWLKVTYERLPELCYGCGMVG

Query:  HVQQEC
        H  +EC
Subjt:  HVQQEC

TXG48504.1 hypothetical protein EZV62_024379 [Acer yangbiense]2.7e-3136.45Show/hide
Query:  GIEDEDLNEANEDLQGGILWRILTTELINPGVFKTFMAKIWNKEGRVRIKAKGRNTFFCQFNNHHEKERIKRGGLWNYDKSLMVIEEAQGASRISRIEFR
        GIE+E + + +  L G    ++L++  +N   FKT + +IW+  G V I+A G+NTF   F N  ++ RI R G W++D+ L+ +E+ +G   IS++ F 
Subjt:  GIEDEDLNEANEDLQGGILWRILTTELINPGVFKTFMAKIWNKEGRVRIKAKGRNTFFCQFNNHHEKERIKRGGLWNYDKSLMVIEEAQGASRISRIEFR

Query:  YVSFWVHIHDLPTVCMRRKWAVELDNSLGDFEEVNLDEERGSGENTLRLQVKIDITQSLKRGLMVRIRSKAEETWLKVTYERLPELCYGCGMVGHVQQEC
           FWV IHD+P +CM R  A  L   +GD  E+   + R      LR++V IDI++ LKR L +++        + + YERLPE CY CG +GH   +C
Subjt:  YVSFWVHIHDLPTVCMRRKWAVELDNSLGDFEEVNLDEERGSGENTLRLQVKIDITQSLKRGLMVRIRSKAEETWLKVTYERLPELCYGCGMVGHVQQEC

Query:  EEM
         ++
Subjt:  EEM

TXG54013.1 hypothetical protein EZV62_019269 [Acer yangbiense]1.6e-3131.53Show/hide
Query:  EKLKITSVERAKVVGIEDEDLNEANEDLQGGILWRILTTELINPGVFKTFMAKIWNKEGRVRIKAKGRNTFFCQFNNHHEKERIKRGGLWNYDKSLMVIE
        EKL +   +   +  I+        + L   ++ + +T ++IN   FK+ ++ IW  +  V ++  G N F  +F N+ +++RI  GG W +DK L+V+ 
Subjt:  EKLKITSVERAKVVGIEDEDLNEANEDLQGGILWRILTTELINPGVFKTFMAKIWNKEGRVRIKAKGRNTFFCQFNNHHEKERIKRGGLWNYDKSLMVIE

Query:  EAQGASRISRIEFRYVSFWVHIHDLPTVCMRRKWAVELDNSLGDFEEVNLDEERGSGENTLRLQVKIDITQSLKRGLMVRIRSKAEETWLKVTYERLPEL
        EA G+ +++ ++FRYV FW+ +H+LP  C+ R+  + L   +G  +E++  E        +R++V ID+   LKRGL V +    +   + + YERLP  
Subjt:  EAQGASRISRIEFRYVSFWVHIHDLPTVCMRRKWAVELDNSLGDFEEVNLDEERGSGENTLRLQVKIDITQSLKRGLMVRIRSKAEETWLKVTYERLPEL

Query:  CYGCGMVGHVQQECEEMPQNTE
        CY CG +GH+ ++C   P NT+
Subjt:  CYGCGMVGHVQQECEEMPQNTE

TXG72599.1 hypothetical protein EZV62_001178 [Acer yangbiense]6.5e-3334.51Show/hide
Query:  MEELEKLKITSVERAKVVGIEDEDLNEANEDLQGGILWRILTTELINPGVFKTFMAKIWNKEGRVRIKAKGRNTFFCQFNNHHEKERIKRGGLWNYDKSL
        +E+L K    + E   V+ + +E + +  ED+   ++ ++LT + IN   FK  + +IW+  G+V ++  G N F   F N  +++R+ R G W++  SL
Subjt:  MEELEKLKITSVERAKVVGIEDEDLNEANEDLQGGILWRILTTELINPGVFKTFMAKIWNKEGRVRIKAKGRNTFFCQFNNHHEKERIKRGGLWNYDKSL

Query:  MVIEEAQGASRISRIEFRYVSFWVHIHDLPTVCMRRKWAVELDNSLGDFEEVNLDEERGSGENTLRLQVKIDITQSLKRGLMVRIRSKAEETWLKVTYER
        + +E+  G   ++ IEF    FW+ IHD+P +CM R+ A  L   +G+  E+ L E R    N LR++V+IDI++ LKR L +++ +  E   + + YER
Subjt:  MVIEEAQGASRISRIEFRYVSFWVHIHDLPTVCMRRKWAVELDNSLGDFEEVNLDEERGSGENTLRLQVKIDITQSLKRGLMVRIRSKAEETWLKVTYER

Query:  LPELCYGCGMVGHVQQEC-EEMPQNT
        LPE CY CG +GH  +EC +E+ + T
Subjt:  LPELCYGCGMVGHVQQEC-EEMPQNT

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]7.2e-3230Show/hide
Query:  MMEELEKLKITSVERAKVVGIEDEDLNEANEDLQGGILWRILTTELINPGVFKTFMAKIWNKEGRVRIKAKGRNTFFCQFNNHHEKERIKRGGLWNYDKS
        ++ + +K K+TS E    + ++ + +  A + L   ++ ++L   +I+  V    +   W  E ++ +++ G+N F   F    +  R+ + G W +DK+
Subjt:  MMEELEKLKITSVERAKVVGIEDEDLNEANEDLQGGILWRILTTELINPGVFKTFMAKIWNKEGRVRIKAKGRNTFFCQFNNHHEKERIKRGGLWNYDKS

Query:  LMVIEEAQGASRISRIEFRYVSFWVHIHDLPTVCMRRKWAVELDNSLGDFEEVNLDEERGSGENTLRLQVKIDITQSLKRGLMVRIRSKAEETWLKVTYE
        L+V+++   +  IS +EF  V+FW+H+ DLP   + +  A+ L N++G+F +V+ +E+  S   +LR++V IDIT+ L+RG+ + I       W+ + YE
Subjt:  LMVIEEAQGASRISRIEFRYVSFWVHIHDLPTVCMRRKWAVELDNSLGDFEEVNLDEERGSGENTLRLQVKIDITQSLKRGLMVRIRSKAEETWLKVTYE

Query:  RLPELCYGCGMVGHVQQECE
        RLP+ CY CG++GH   +C+
Subjt:  RLPELCYGCGMVGHVQQECE

TrEMBL top hitse value%identityAlignment
A0A5C7GU64 CCHC-type domain-containing protein1.0e-3133.5Show/hide
Query:  ERAKVVGIEDEDLNEANEDLQGGILWRILTTELINPGVFKTFMAKIWNKEGRVRIKAKGRNTFFCQFNNHHEKERIKRGGLWNYDKSLMVIEEAQGASRI
        E A V  I ++ + + +ED+   ++ ++LT + +N   FK  + +IWN+ G+V ++  G NTF   F N   + ++   G W + KSL+V+E+ +G   I
Subjt:  ERAKVVGIEDEDLNEANEDLQGGILWRILTTELINPGVFKTFMAKIWNKEGRVRIKAKGRNTFFCQFNNHHEKERIKRGGLWNYDKSLMVIEEAQGASRI

Query:  SRIEFRYVSFWVHIHDLPTVCMRRKWAVELDNSLGDFEEVNLDEERGSGENTLRLQVKIDITQSLKRGLMVRIRSKAEETWLKVTYERLPELCYGCGMVG
        ++++F    FWV IHD+P +CM ++    L   +G+  E+   E R      +R++V++DIT+ LKR L +++    E T + + YERLP+ C+ CG +G
Subjt:  SRIEFRYVSFWVHIHDLPTVCMRRKWAVELDNSLGDFEEVNLDEERGSGENTLRLQVKIDITQSLKRGLMVRIRSKAEETWLKVTYERLPELCYGCGMVG

Query:  HVQQEC
        H  +EC
Subjt:  HVQQEC

A0A5C7GUN2 CCHC-type domain-containing protein1.3e-3136.45Show/hide
Query:  GIEDEDLNEANEDLQGGILWRILTTELINPGVFKTFMAKIWNKEGRVRIKAKGRNTFFCQFNNHHEKERIKRGGLWNYDKSLMVIEEAQGASRISRIEFR
        GIE+E + + +  L G    ++L++  +N   FKT + +IW+  G V I+A G+NTF   F N  ++ RI R G W++D+ L+ +E+ +G   IS++ F 
Subjt:  GIEDEDLNEANEDLQGGILWRILTTELINPGVFKTFMAKIWNKEGRVRIKAKGRNTFFCQFNNHHEKERIKRGGLWNYDKSLMVIEEAQGASRISRIEFR

Query:  YVSFWVHIHDLPTVCMRRKWAVELDNSLGDFEEVNLDEERGSGENTLRLQVKIDITQSLKRGLMVRIRSKAEETWLKVTYERLPELCYGCGMVGHVQQEC
           FWV IHD+P +CM R  A  L   +GD  E+   + R      LR++V IDI++ LKR L +++        + + YERLPE CY CG +GH   +C
Subjt:  YVSFWVHIHDLPTVCMRRKWAVELDNSLGDFEEVNLDEERGSGENTLRLQVKIDITQSLKRGLMVRIRSKAEETWLKVTYERLPELCYGCGMVGHVQQEC

Query:  EEM
         ++
Subjt:  EEM

A0A5C7H9Y2 CCHC-type domain-containing protein7.7e-3231.53Show/hide
Query:  EKLKITSVERAKVVGIEDEDLNEANEDLQGGILWRILTTELINPGVFKTFMAKIWNKEGRVRIKAKGRNTFFCQFNNHHEKERIKRGGLWNYDKSLMVIE
        EKL +   +   +  I+        + L   ++ + +T ++IN   FK+ ++ IW  +  V ++  G N F  +F N+ +++RI  GG W +DK L+V+ 
Subjt:  EKLKITSVERAKVVGIEDEDLNEANEDLQGGILWRILTTELINPGVFKTFMAKIWNKEGRVRIKAKGRNTFFCQFNNHHEKERIKRGGLWNYDKSLMVIE

Query:  EAQGASRISRIEFRYVSFWVHIHDLPTVCMRRKWAVELDNSLGDFEEVNLDEERGSGENTLRLQVKIDITQSLKRGLMVRIRSKAEETWLKVTYERLPEL
        EA G+ +++ ++FRYV FW+ +H+LP  C+ R+  + L   +G  +E++  E        +R++V ID+   LKRGL V +    +   + + YERLP  
Subjt:  EAQGASRISRIEFRYVSFWVHIHDLPTVCMRRKWAVELDNSLGDFEEVNLDEERGSGENTLRLQVKIDITQSLKRGLMVRIRSKAEETWLKVTYERLPEL

Query:  CYGCGMVGHVQQECEEMPQNTE
        CY CG +GH+ ++C   P NT+
Subjt:  CYGCGMVGHVQQECEEMPQNTE

A0A5C7IU01 CCHC-type domain-containing protein3.1e-3334.51Show/hide
Query:  MEELEKLKITSVERAKVVGIEDEDLNEANEDLQGGILWRILTTELINPGVFKTFMAKIWNKEGRVRIKAKGRNTFFCQFNNHHEKERIKRGGLWNYDKSL
        +E+L K    + E   V+ + +E + +  ED+   ++ ++LT + IN   FK  + +IW+  G+V ++  G N F   F N  +++R+ R G W++  SL
Subjt:  MEELEKLKITSVERAKVVGIEDEDLNEANEDLQGGILWRILTTELINPGVFKTFMAKIWNKEGRVRIKAKGRNTFFCQFNNHHEKERIKRGGLWNYDKSL

Query:  MVIEEAQGASRISRIEFRYVSFWVHIHDLPTVCMRRKWAVELDNSLGDFEEVNLDEERGSGENTLRLQVKIDITQSLKRGLMVRIRSKAEETWLKVTYER
        + +E+  G   ++ IEF    FW+ IHD+P +CM R+ A  L   +G+  E+ L E R    N LR++V+IDI++ LKR L +++ +  E   + + YER
Subjt:  MVIEEAQGASRISRIEFRYVSFWVHIHDLPTVCMRRKWAVELDNSLGDFEEVNLDEERGSGENTLRLQVKIDITQSLKRGLMVRIRSKAEETWLKVTYER

Query:  LPELCYGCGMVGHVQQEC-EEMPQNT
        LPE CY CG +GH  +EC +E+ + T
Subjt:  LPELCYGCGMVGHVQQEC-EEMPQNT

A0A6J1DU55 uncharacterized protein LOC1110231353.5e-3230Show/hide
Query:  MMEELEKLKITSVERAKVVGIEDEDLNEANEDLQGGILWRILTTELINPGVFKTFMAKIWNKEGRVRIKAKGRNTFFCQFNNHHEKERIKRGGLWNYDKS
        ++ + +K K+TS E    + ++ + +  A + L   ++ ++L   +I+  V    +   W  E ++ +++ G+N F   F    +  R+ + G W +DK+
Subjt:  MMEELEKLKITSVERAKVVGIEDEDLNEANEDLQGGILWRILTTELINPGVFKTFMAKIWNKEGRVRIKAKGRNTFFCQFNNHHEKERIKRGGLWNYDKS

Query:  LMVIEEAQGASRISRIEFRYVSFWVHIHDLPTVCMRRKWAVELDNSLGDFEEVNLDEERGSGENTLRLQVKIDITQSLKRGLMVRIRSKAEETWLKVTYE
        L+V+++   +  IS +EF  V+FW+H+ DLP   + +  A+ L N++G+F +V+ +E+  S   +LR++V IDIT+ L+RG+ + I       W+ + YE
Subjt:  LMVIEEAQGASRISRIEFRYVSFWVHIHDLPTVCMRRKWAVELDNSLGDFEEVNLDEERGSGENTLRLQVKIDITQSLKRGLMVRIRSKAEETWLKVTYE

Query:  RLPELCYGCGMVGHVQQECE
        RLP+ CY CG++GH   +C+
Subjt:  RLPELCYGCGMVGHVQQECE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G42140.1 zinc ion binding;nucleic acid binding3.9e-0422.14Show/hide
Query:  FNNHHEKERIKRGGLWNYDKSLMVIEEAQGASRISRIEFRYVSFWVHIHDLPTVCMRRKWAVELDNSLGDFEEVNLDEERGSGENTLRLQVKIDITQSLK
        F +      I R G W+++  + VI+  +     S  EF+ + FW+ I  +P   +  +    +   +G F E NL                        
Subjt:  FNNHHEKERIKRGGLWNYDKSLMVIEEAQGASRISRIEFRYVSFWVHIHDLPTVCMRRKWAVELDNSLGDFEEVNLDEERGSGENTLRLQVKIDITQSLK

Query:  RGLMVRIRSKAEETWLKVTYERLPELCYGCGMVGHVQQEC
                   + + LK  YE+L   C  CGM+ H   EC
Subjt:  RGLMVRIRSKAEETWLKVTYERLPELCYGCGMVGHVQQEC

AT5G36228.1 nucleic acid binding;zinc ion binding7.7e-0826.13Show/hide
Query:  YVSFWVHIHDLPTVCMRRKWAVELDNSLGDFEEVNLDEERGSGENTLRLQVKIDITQSLKRGLMVRIRSKAEETWLKVTYERLPELCYGCGMVGHVQQEC
        ++  WVHI  +P   +  +    + ++LG+   ++ +EE  S    +R++V++D T+ L+    VR  S+ E   +   YE+L  +C  C  V H    C
Subjt:  YVSFWVHIHDLPTVCMRRKWAVELDNSLGDFEEVNLDEERGSGENTLRLQVKIDITQSLKRGLMVRIRSKAEETWLKVTYERLPELCYGCGMVGHVQQEC

Query:  EEMPQNTEVEN
          +    E++N
Subjt:  EEMPQNTEVEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGAAGAATTGGAAAAACTAAAAATTACTTCTGTAGAAAGAGCCAAAGTGGTGGGCATAGAAGATGAGGATCTAAACGAAGCTAACGAGGATCTCCAAGGAGGGAT
CTTATGGAGAATCCTAACCACTGAACTCATAAATCCTGGAGTTTTCAAAACCTTTATGGCAAAAATTTGGAACAAAGAAGGACGGGTGAGAATAAAAGCAAAGGGAAGGA
ACACCTTCTTCTGCCAGTTCAACAACCACCACGAAAAAGAAAGAATCAAAAGAGGAGGGCTTTGGAACTACGACAAATCGTTAATGGTTATAGAAGAGGCACAAGGAGCT
AGCAGAATATCTCGGATAGAATTCAGGTATGTTAGTTTTTGGGTCCATATCCACGACTTACCAACGGTTTGTATGCGCAGGAAATGGGCGGTGGAGCTCGACAACTCTTT
GGGCGACTTTGAAGAAGTCAACTTAGACGAAGAGAGGGGAAGTGGGGAAAACACACTAAGGCTTCAAGTCAAAATTGATATCACTCAATCGTTAAAGAGAGGCTTGATGG
TCAGAATCAGATCAAAAGCAGAGGAAACTTGGCTGAAAGTGACGTACGAACGTCTCCCCGAATTATGTTATGGTTGTGGGATGGTGGGTCATGTACAACAAGAATGCGAA
GAAATGCCACAGAACACAGAAGTAGAAAACTTGTATTGGCGAATGGATGAGAGAAACACCAATCATATGAGGCCGGATAAAGCACAAACAACAAGACAACAAAAACAAAA
CCATATGGGGAAGAGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGGAAGAATTGGAAAAACTAAAAATTACTTCTGTAGAAAGAGCCAAAGTGGTGGGCATAGAAGATGAGGATCTAAACGAAGCTAACGAGGATCTCCAAGGAGGGAT
CTTATGGAGAATCCTAACCACTGAACTCATAAATCCTGGAGTTTTCAAAACCTTTATGGCAAAAATTTGGAACAAAGAAGGACGGGTGAGAATAAAAGCAAAGGGAAGGA
ACACCTTCTTCTGCCAGTTCAACAACCACCACGAAAAAGAAAGAATCAAAAGAGGAGGGCTTTGGAACTACGACAAATCGTTAATGGTTATAGAAGAGGCACAAGGAGCT
AGCAGAATATCTCGGATAGAATTCAGGTATGTTAGTTTTTGGGTCCATATCCACGACTTACCAACGGTTTGTATGCGCAGGAAATGGGCGGTGGAGCTCGACAACTCTTT
GGGCGACTTTGAAGAAGTCAACTTAGACGAAGAGAGGGGAAGTGGGGAAAACACACTAAGGCTTCAAGTCAAAATTGATATCACTCAATCGTTAAAGAGAGGCTTGATGG
TCAGAATCAGATCAAAAGCAGAGGAAACTTGGCTGAAAGTGACGTACGAACGTCTCCCCGAATTATGTTATGGTTGTGGGATGGTGGGTCATGTACAACAAGAATGCGAA
GAAATGCCACAGAACACAGAAGTAGAAAACTTGTATTGGCGAATGGATGAGAGAAACACCAATCATATGAGGCCGGATAAAGCACAAACAACAAGACAACAAAAACAAAA
CCATATGGGGAAGAGGTAG
Protein sequenceShow/hide protein sequence
MMEELEKLKITSVERAKVVGIEDEDLNEANEDLQGGILWRILTTELINPGVFKTFMAKIWNKEGRVRIKAKGRNTFFCQFNNHHEKERIKRGGLWNYDKSLMVIEEAQGA
SRISRIEFRYVSFWVHIHDLPTVCMRRKWAVELDNSLGDFEEVNLDEERGSGENTLRLQVKIDITQSLKRGLMVRIRSKAEETWLKVTYERLPELCYGCGMVGHVQQECE
EMPQNTEVENLYWRMDERNTNHMRPDKAQTTRQQKQNHMGKR