; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0008615 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008615
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr9:26534279..26535613
RNA-Seq ExpressionLag0008615
SyntenyLag0008615
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015382410.1 uncharacterized protein LOC107175497 [Citrus sinensis]5.9e-3030.49Show/hide
Query:  DELVKRWKSWSLTGEEAEVVRPGTVPSSLSATDLELCVVGKVLTSKRANQDAFRNVMRAAWRVHNATGVEPAGENVFVVQFRTKGEKLRVMGIGPWAFDR
        +EL+++ K+ S+ GE+   +      S+        C+VGK++  +  N +  R+ M   WR +    +E  G N+F+ +F  + +K RVMG GPW FD 
Subjt:  DELVKRWKSWSLTGEEAEVVRPGTVPSSLSATDLELCVVGKVLTSKRANQDAFRNVMRAAWRVHNATGVEPAGENVFVVQFRTKGEKLRVMGIGPWAFDR

Query:  SL-------------------------IHNVPMKWQTRGMTQHLGGKIGVVEEVGGSNGNDWIGPILRIRVRIRLDRPLRRGFHMQDDDEKDSLCPVLYE
        +L                         + N+P+ W  R M Q LG  IG VE++      + IG I R+R+ + + +PLR+   ++ +DE     P+LYE
Subjt:  SL-------------------------IHNVPMKWQTRGMTQHLGGKIGVVEEVGGSNGNDWIGPILRIRVRIRLDRPLRRGFHMQDDDEKDSLCPVLYE

Query:  RLPDFCFGCGCLSHSRRECEGVGASSSGGGEDQYGEWLRAGAFLGE
        RLPDFCF CG + H  +EC  +        +  YG W++A    G+
Subjt:  RLPDFCFGCGCLSHSRRECEGVGASSSGGGEDQYGEWLRAGAFLGE

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]1.1e-4738.7Show/hide
Query:  MDELVKRWKSWSLTGEEAEVVRPGTVPSSLSATDLELCVVGKVLTSKRANQDAFRNVMRAAWRVHNATGVEPAGENVFVVQFRTKGEKLRVMGIGPWAFD
        MDE+   W+ +  T +E E V        L+A +++LCVV K+ TSKR + +A R+VM++ WRVHN+T  EP G N++V+ F++  EK RV+  GPW F+
Subjt:  MDELVKRWKSWSLTGEEAEVVRPGTVPSSLSATDLELCVVGKVLTSKRANQDAFRNVMRAAWRVHNATGVEPAGENVFVVQFRTKGEKLRVMGIGPWAFD

Query:  RSL-------------------------IHNVPMKWQTRGMTQHLGGKIGVVEEVGGSNGNDWIGPILRIRVRIRLDRPLRRGFHMQDDDEKDSLCPVLY
        +SL                         IHN+P +  +  M   LG K+G VEE+ G   + W GP +R+RV+I + +PLRRG  +++ D KD  CP+ Y
Subjt:  RSL-------------------------IHNVPMKWQTRGMTQHLGGKIGVVEEVGGSNGNDWIGPILRIRVRIRLDRPLRRGFHMQDDDEKDSLCPVLY

Query:  ERLPDFCFGCGCLSHSRRECEGVGASSSGGGEDQYGEWLRAGAFLGEGIRREPDQVGASGG
        E+LPDFC+ CG + HS RECE      +    +QYG+WLRA   L + +    ++V   GG
Subjt:  ERLPDFCFGCGCLSHSRRECEGVGASSSGGGEDQYGEWLRAGAFLGEGIRREPDQVGASGG

XP_022155933.1 uncharacterized protein LOC111022932 [Momordica charantia]7.0e-3134.33Show/hide
Query:  MDELVKRWKSWSLTGEEAEVVRPGTVPSSLSATDLELCVVGKVLTSKRANQDAFRNVMRAAWRVHNATGVEPAGENVFVVQFRTKGEKLRVMGIGPWAFD
        MDE+ + W++++LT E+ E +   +    ++  +++   VGK+ TSKR + +AFR+VM++ W+VH +T +E AG N++V+ F++  EK RV+  GPW+F+
Subjt:  MDELVKRWKSWSLTGEEAEVVRPGTVPSSLSATDLELCVVGKVLTSKRANQDAFRNVMRAAWRVHNATGVEPAGENVFVVQFRTKGEKLRVMGIGPWAFD

Query:  RSL-------------------------IHNVPMKWQTRGMTQHLGGKIGVVEEVGGSNGNDWIGPILRIRVRIRLDRPLRRGFHMQDDDEKDSLCPVLY
         SL                         IH +P +   + M + LG +IG VEE+  +   +W GP +R+RV+I + +P +RG  ++  DEK+S CP+ Y
Subjt:  RSL-------------------------IHNVPMKWQTRGMTQHLGGKIGVVEEVGGSNGNDWIGPILRIRVRIRLDRPLRRGFHMQDDDEKDSLCPVLY

Query:  E
        E
Subjt:  E

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]8.5e-4539.82Show/hide
Query:  MDELVKRWKSWSLTGEEAEVVRPGTVPSSLSATDLELCVVGKVLTSKRANQDAFRNVMRAAWRVHNATGVEPAGENVFVVQFRTKGEKLRVMGIGPWAFD
        MD++ K W++++L  EE + +        L+  +++LC VGK+  SKR   +AF +VM+  W++HN+T +E AG N++V+ F+T  EK+RV  +GPW FD
Subjt:  MDELVKRWKSWSLTGEEAEVVRPGTVPSSLSATDLELCVVGKVLTSKRANQDAFRNVMRAAWRVHNATGVEPAGENVFVVQFRTKGEKLRVMGIGPWAFD

Query:  RSL-------------------------IHNVPMKWQTRGMTQHLGGKIGVVEEVGGSNGNDWIGPILRIRVRIRLDRPLRRGFHMQDDDEKDSLCPVLY
        +SL                         IH +  +  T+ M + LG ++G VEEV G +  DW+ P L +RV+I + +PLRRG  ++  D KD  CP+ Y
Subjt:  RSL-------------------------IHNVPMKWQTRGMTQHLGGKIGVVEEVGGSNGNDWIGPILRIRVRIRLDRPLRRGFHMQDDDEKDSLCPVLY

Query:  ERLPDFCFGCGCLSHSRRECE
        ERLPDFC+GCGC+ HS RE E
Subjt:  ERLPDFCFGCGCLSHSRRECE

XP_024955847.1 uncharacterized protein LOC112498636 [Citrus sinensis]2.0e-3027.98Show/hide
Query:  DELVKRWKSWSLTGEEAEVVRPGTVPSSLSATDLELCVVGKVLTSKRANQDAFRNVMRAAWRVHNATGVEPAGENVFVVQFRTKGEKLRVMGIGPWAFDR
        +EL+++ K+ S+ GE+   +      S+        C+VGK++  +  N +  R+ M   WR +    +E  G N+F+ +F  + +K RVMG GPW FD 
Subjt:  DELVKRWKSWSLTGEEAEVVRPGTVPSSLSATDLELCVVGKVLTSKRANQDAFRNVMRAAWRVHNATGVEPAGENVFVVQFRTKGEKLRVMGIGPWAFDR

Query:  SL-------------------------IHNVPMKWQTRGMTQHLGGKIGVVEEVGGSNGNDWIGPILRIRVRIRLDRPLRRGFHMQDDDEKDSLCPVLYE
        +L                         + N+P+ W  R M Q LG  IG VEE+      + IG I R+R+ + + +PLR+   ++ +DE     P+LYE
Subjt:  SL-------------------------IHNVPMKWQTRGMTQHLGGKIGVVEEVGGSNGNDWIGPILRIRVRIRLDRPLRRGFHMQDDDEKDSLCPVLYE

Query:  RLPDFCFGCGCLSHSRRECEGVGASSSGGGEDQYGEWLRAGAFLG-------EGIRREPDQV----GASGGGKQAIV--AVVVPQTGSGEAADPVQSEVD
        RLPDFCF CG + H  +EC  +        +  YG W++A    G       +  +RE +Q     GAS    Q  +  +   P+T  G  + P++S   
Subjt:  RLPDFCFGCGCLSHSRRECEGVGASSSGGGEDQYGEWLRAGAFLG-------EGIRREPDQV----GASGGGKQAIV--AVVVPQTGSGEAADPVQSEVD

Query:  DCTVGGGKEVRVEGCRKGKQKMGHDASESWSAYVEGEAMAVDSVGVVQSREAEKGGKNVS-----GKGWKRRARECLADVTNLQAPLTLGGSKRMVDSDQ
           +  GK  +V+G     QK G+   +     V  E    D+     + E  + G   S      K WK +ARE     ++ +A   LG +KR  ++  
Subjt:  DCTVGGGKEVRVEGCRKGKQKMGHDASESWSAYVEGEAMAVDSVGVVQSREAEKGGKNVS-----GKGWKRRARECLADVTNLQAPLTLGGSKRMVDSDQ

Query:  LAGQGGKKTRV
              KK R+
Subjt:  LAGQGGKKTRV

TrEMBL top hitse value%identityAlignment
A0A1R3K847 Uncharacterized protein2.3e-2730.51Show/hide
Query:  WKSWSLTGEEAEVVRPGTVPSSLSATDLELCVVGKVLTSKRANQDAFRNVMRAAWRVHNATGVEPAGENVFVVQFRTKGEKLRVMGIGPWAFDRSL----
        W++++LT EE   +       + S  + +LC++GK+L+ +  N D  RNV+   W++     V   GE +++ QF ++ EK RV   GPW F+++L    
Subjt:  WKSWSLTGEEAEVVRPGTVPSSLSATDLELCVVGKVLTSKRANQDAFRNVMRAAWRVHNATGVEPAGENVFVVQFRTKGEKLRVMGIGPWAFDRSL----

Query:  ---------------------IHNVPMKWQTRGMTQHLGGKIGVVEEVGGSNGNDWIGPILRIRVRIRLDRPLRRGFHMQDDDEKDSLCPVLYERLPDFC
                             +H++P+ + T  + + +G   G V E+         G  LRIR  + +++PLRRG  +   +    L    YE+LPDFC
Subjt:  ---------------------IHNVPMKWQTRGMTQHLGGKIGVVEEVGGSNGNDWIGPILRIRVRIRLDRPLRRGFHMQDDDEKDSLCPVLYERLPDFC

Query:  FGCGCLSHSRRECEG--VGASSSGGGEDQYGEWLRA
        + CGCL+H+  ECE   +    SG  + +YG WLRA
Subjt:  FGCGCLSHSRRECEG--VGASSSGGGEDQYGEWLRA

A0A5C7GUN1 Uncharacterized protein2.3e-2733.33Show/hide
Query:  SLTGEEAEVVRPGTVPSSLSATDLELCVVGKVLTSKRANQDAFRNVMRAAWRVHNATGVEPAGENVFVVQFRTKGEKLRVMGIGPWAFDRSL--------
        SLT  E  V R   V     A  L LC+ GK+L+ +  N++AFR+++   W+V     +E    N++   F++  ++ RV   GPW+FD +L        
Subjt:  SLTGEEAEVVRPGTVPSSLSATDLELCVVGKVLTSKRANQDAFRNVMRAAWRVHNATGVEPAGENVFVVQFRTKGEKLRVMGIGPWAFDRSL--------

Query:  -----------------IHNVPMKWQTRGMTQHLGGKIGVVEEVGGSNGNDWIGPILRIRVRIRLDRPLRRGFHMQD-DDEKDSLCPVLYERLPDFCFGC
                         I NVPM + T+ + + LG  IG V EV     +D +G  +R+RV + +D+PLRR   +    D ++++ P+ YERLP FCF C
Subjt:  -----------------IHNVPMKWQTRGMTQHLGGKIGVVEEVGGSNGNDWIGPILRIRVRIRLDRPLRRGFHMQD-DDEKDSLCPVLYERLPDFCFGC

Query:  GCLSHSRRECEGVGASSSGGGEDQ-YGEWLRAGA
        G + H   EC   G      G    YG WLRA A
Subjt:  GCLSHSRRECEGVGASSSGGGEDQ-YGEWLRAGA

A0A6J1D765 uncharacterized protein LOC1110179025.2e-4838.7Show/hide
Query:  MDELVKRWKSWSLTGEEAEVVRPGTVPSSLSATDLELCVVGKVLTSKRANQDAFRNVMRAAWRVHNATGVEPAGENVFVVQFRTKGEKLRVMGIGPWAFD
        MDE+   W+ +  T +E E V        L+A +++LCVV K+ TSKR + +A R+VM++ WRVHN+T  EP G N++V+ F++  EK RV+  GPW F+
Subjt:  MDELVKRWKSWSLTGEEAEVVRPGTVPSSLSATDLELCVVGKVLTSKRANQDAFRNVMRAAWRVHNATGVEPAGENVFVVQFRTKGEKLRVMGIGPWAFD

Query:  RSL-------------------------IHNVPMKWQTRGMTQHLGGKIGVVEEVGGSNGNDWIGPILRIRVRIRLDRPLRRGFHMQDDDEKDSLCPVLY
        +SL                         IHN+P +  +  M   LG K+G VEE+ G   + W GP +R+RV+I + +PLRRG  +++ D KD  CP+ Y
Subjt:  RSL-------------------------IHNVPMKWQTRGMTQHLGGKIGVVEEVGGSNGNDWIGPILRIRVRIRLDRPLRRGFHMQDDDEKDSLCPVLY

Query:  ERLPDFCFGCGCLSHSRRECEGVGASSSGGGEDQYGEWLRAGAFLGEGIRREPDQVGASGG
        E+LPDFC+ CG + HS RECE      +    +QYG+WLRA   L + +    ++V   GG
Subjt:  ERLPDFCFGCGCLSHSRRECEGVGASSSGGGEDQYGEWLRAGAFLGEGIRREPDQVGASGG

A0A6J1DP89 uncharacterized protein LOC1110229323.4e-3134.33Show/hide
Query:  MDELVKRWKSWSLTGEEAEVVRPGTVPSSLSATDLELCVVGKVLTSKRANQDAFRNVMRAAWRVHNATGVEPAGENVFVVQFRTKGEKLRVMGIGPWAFD
        MDE+ + W++++LT E+ E +   +    ++  +++   VGK+ TSKR + +AFR+VM++ W+VH +T +E AG N++V+ F++  EK RV+  GPW+F+
Subjt:  MDELVKRWKSWSLTGEEAEVVRPGTVPSSLSATDLELCVVGKVLTSKRANQDAFRNVMRAAWRVHNATGVEPAGENVFVVQFRTKGEKLRVMGIGPWAFD

Query:  RSL-------------------------IHNVPMKWQTRGMTQHLGGKIGVVEEVGGSNGNDWIGPILRIRVRIRLDRPLRRGFHMQDDDEKDSLCPVLY
         SL                         IH +P +   + M + LG +IG VEE+  +   +W GP +R+RV+I + +P +RG  ++  DEK+S CP+ Y
Subjt:  RSL-------------------------IHNVPMKWQTRGMTQHLGGKIGVVEEVGGSNGNDWIGPILRIRVRIRLDRPLRRGFHMQDDDEKDSLCPVLY

Query:  E
        E
Subjt:  E

A0A6J1DVS4 uncharacterized protein LOC1110235554.1e-4539.82Show/hide
Query:  MDELVKRWKSWSLTGEEAEVVRPGTVPSSLSATDLELCVVGKVLTSKRANQDAFRNVMRAAWRVHNATGVEPAGENVFVVQFRTKGEKLRVMGIGPWAFD
        MD++ K W++++L  EE + +        L+  +++LC VGK+  SKR   +AF +VM+  W++HN+T +E AG N++V+ F+T  EK+RV  +GPW FD
Subjt:  MDELVKRWKSWSLTGEEAEVVRPGTVPSSLSATDLELCVVGKVLTSKRANQDAFRNVMRAAWRVHNATGVEPAGENVFVVQFRTKGEKLRVMGIGPWAFD

Query:  RSL-------------------------IHNVPMKWQTRGMTQHLGGKIGVVEEVGGSNGNDWIGPILRIRVRIRLDRPLRRGFHMQDDDEKDSLCPVLY
        +SL                         IH +  +  T+ M + LG ++G VEEV G +  DW+ P L +RV+I + +PLRRG  ++  D KD  CP+ Y
Subjt:  RSL-------------------------IHNVPMKWQTRGMTQHLGGKIGVVEEVGGSNGNDWIGPILRIRVRIRLDRPLRRGFHMQDDDEKDSLCPVLY

Query:  ERLPDFCFGCGCLSHSRRECE
        ERLPDFC+GCGC+ HS RE E
Subjt:  ERLPDFCFGCGCLSHSRRECE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G31430.1 unknown protein9.2e-0525.71Show/hide
Query:  VMGIGPWAFDRSL---------------------IHNVPMKWQTRGMTQHLGGKIGVVEEVGGSNGNDWIGPILRIRVRIRLDRPLRRGFHMQDDDEKDS
        V+  GPWAF+  +                     I  +P ++  RG+ +H+G  +G V +   +          R+ +   +  PLR   H Q     ++
Subjt:  VMGIGPWAFDRSL---------------------IHNVPMKWQTRGMTQHLGGKIGVVEEVGGSNGNDWIGPILRIRVRIRLDRPLRRGFHMQDDDEKDS

Query:  LCPVLYERLPDFCFGCGCLSHSRRECEGVGASSSGGGEDQ
        L    YERL  FC  CG L+H    C         GGE+Q
Subjt:  LCPVLYERLPDFCFGCGCLSHSRRECEGVGASSSGGGEDQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGAGTTGGTAAAGAGGTGGAAGTCATGGTCGCTTACCGGGGAGGAGGCGGAGGTGGTACGGCCAGGTACAGTTCCATCTTCTCTGTCGGCGACAGACTTGGAGCT
ATGTGTGGTGGGTAAGGTCCTGACGTCCAAGCGGGCCAACCAAGACGCTTTTCGCAATGTGATGCGGGCGGCGTGGAGAGTTCATAATGCTACAGGTGTGGAGCCGGCAG
GAGAGAATGTTTTTGTGGTTCAGTTCCGTACCAAGGGGGAAAAGTTGAGAGTTATGGGTATTGGTCCTTGGGCTTTTGACCGTTCCCTGATTCATAACGTGCCTATGAAG
TGGCAAACGAGGGGTATGACGCAACACCTGGGAGGAAAGATTGGGGTGGTTGAAGAGGTGGGAGGTTCAAATGGGAATGATTGGATAGGCCCTATCTTGCGTATTAGAGT
TCGTATCCGGTTGGATCGACCTCTTCGAAGAGGTTTCCACATGCAGGATGATGATGAGAAGGATTCTTTGTGCCCTGTGCTGTATGAGCGACTCCCGGATTTCTGTTTTG
GTTGTGGATGTCTAAGCCACTCGAGACGGGAATGTGAGGGGGTGGGGGCGAGCTCTTCGGGAGGAGGGGAGGACCAATATGGTGAGTGGTTGAGAGCAGGGGCTTTCCTT
GGTGAGGGTATCCGACGGGAACCAGACCAGGTAGGTGCGAGTGGCGGTGGGAAGCAGGCTATTGTGGCTGTAGTGGTGCCCCAAACTGGTTCAGGGGAGGCAGCGGACCC
TGTTCAGAGTGAGGTTGATGACTGCACAGTGGGGGGAGGGAAGGAAGTTCGGGTGGAGGGCTGCAGGAAAGGTAAACAGAAGATGGGGCATGATGCTTCTGAATCATGGT
CCGCCTATGTGGAGGGGGAGGCTATGGCGGTGGATAGTGTGGGAGTGGTGCAGAGTAGGGAGGCAGAGAAGGGTGGGAAGAATGTCAGTGGCAAAGGGTGGAAAAGGCGC
GCAAGAGAGTGTTTAGCAGATGTCACAAACTTACAGGCACCTTTGACTCTGGGTGGGAGTAAACGGATGGTTGATTCAGATCAGTTGGCCGGGCAGGGCGGAAAGAAGAC
TAGAGTGGAGGAGGAAAACAAGGTCCATCCAGATATGACTGTTTCGATTTCAGCGATGGCTGACCTTCAGCCCCGCCGGTCGCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGAGTTGGTAAAGAGGTGGAAGTCATGGTCGCTTACCGGGGAGGAGGCGGAGGTGGTACGGCCAGGTACAGTTCCATCTTCTCTGTCGGCGACAGACTTGGAGCT
ATGTGTGGTGGGTAAGGTCCTGACGTCCAAGCGGGCCAACCAAGACGCTTTTCGCAATGTGATGCGGGCGGCGTGGAGAGTTCATAATGCTACAGGTGTGGAGCCGGCAG
GAGAGAATGTTTTTGTGGTTCAGTTCCGTACCAAGGGGGAAAAGTTGAGAGTTATGGGTATTGGTCCTTGGGCTTTTGACCGTTCCCTGATTCATAACGTGCCTATGAAG
TGGCAAACGAGGGGTATGACGCAACACCTGGGAGGAAAGATTGGGGTGGTTGAAGAGGTGGGAGGTTCAAATGGGAATGATTGGATAGGCCCTATCTTGCGTATTAGAGT
TCGTATCCGGTTGGATCGACCTCTTCGAAGAGGTTTCCACATGCAGGATGATGATGAGAAGGATTCTTTGTGCCCTGTGCTGTATGAGCGACTCCCGGATTTCTGTTTTG
GTTGTGGATGTCTAAGCCACTCGAGACGGGAATGTGAGGGGGTGGGGGCGAGCTCTTCGGGAGGAGGGGAGGACCAATATGGTGAGTGGTTGAGAGCAGGGGCTTTCCTT
GGTGAGGGTATCCGACGGGAACCAGACCAGGTAGGTGCGAGTGGCGGTGGGAAGCAGGCTATTGTGGCTGTAGTGGTGCCCCAAACTGGTTCAGGGGAGGCAGCGGACCC
TGTTCAGAGTGAGGTTGATGACTGCACAGTGGGGGGAGGGAAGGAAGTTCGGGTGGAGGGCTGCAGGAAAGGTAAACAGAAGATGGGGCATGATGCTTCTGAATCATGGT
CCGCCTATGTGGAGGGGGAGGCTATGGCGGTGGATAGTGTGGGAGTGGTGCAGAGTAGGGAGGCAGAGAAGGGTGGGAAGAATGTCAGTGGCAAAGGGTGGAAAAGGCGC
GCAAGAGAGTGTTTAGCAGATGTCACAAACTTACAGGCACCTTTGACTCTGGGTGGGAGTAAACGGATGGTTGATTCAGATCAGTTGGCCGGGCAGGGCGGAAAGAAGAC
TAGAGTGGAGGAGGAAAACAAGGTCCATCCAGATATGACTGTTTCGATTTCAGCGATGGCTGACCTTCAGCCCCGCCGGTCGCCATGA
Protein sequenceShow/hide protein sequence
MDELVKRWKSWSLTGEEAEVVRPGTVPSSLSATDLELCVVGKVLTSKRANQDAFRNVMRAAWRVHNATGVEPAGENVFVVQFRTKGEKLRVMGIGPWAFDRSLIHNVPMK
WQTRGMTQHLGGKIGVVEEVGGSNGNDWIGPILRIRVRIRLDRPLRRGFHMQDDDEKDSLCPVLYERLPDFCFGCGCLSHSRRECEGVGASSSGGGEDQYGEWLRAGAFL
GEGIRREPDQVGASGGGKQAIVAVVVPQTGSGEAADPVQSEVDDCTVGGGKEVRVEGCRKGKQKMGHDASESWSAYVEGEAMAVDSVGVVQSREAEKGGKNVSGKGWKRR
ARECLADVTNLQAPLTLGGSKRMVDSDQLAGQGGKKTRVEEENKVHPDMTVSISAMADLQPRRSP