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Lag0008616 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008616
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr9:26535699..26536304
RNA-Seq ExpressionLag0008616
SyntenyLag0008616
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5443558.1 hypothetical protein F2P56_036105, partial [Juglans regia]1.8e-4346.24Show/hide
Query:  MVFLSETKVHSSRFELLKVRLGFVNCFSVSSVGRSGGLALLWNPEVRFSLLSYSPNHIDGWVDGGVNP-WRFSRIYGFPQAELKGRTWSLLKHLRGNSGT
        +VFL ETK+ +   E  K RL   +CF+V  VGRSGGL+LLW  ++R  + S+S +HID  +  G  P WRF+ +YG P+   +  TW+LL+ L      
Subjt:  MVFLSETKVHSSRFELLKVRLGFVNCFSVSSVGRSGGLALLWNPEVRFSLLSYSPNHIDGWVDGGVNP-WRFSRIYGFPQAELKGRTWSLLKHLRGNSGT

Query:  PWLVGGDFNAILSHQEKEGGRAKAEAELSGFQGAIDDCELLDLGFRGAAFTWCNGRPGEEIVWERIDRCLSNVAWQELFPVHELTH
        PWLVGGDFN +L   EK GGR ++E ++  F+  I DC L DLGFRG  +TWCNGR G   + ER+DR L N  +  LFP   + H
Subjt:  PWLVGGDFNAILSHQEKEGGRAKAEAELSGFQGAIDDCELLDLGFRGAAFTWCNGRPGEEIVWERIDRCLSNVAWQELFPVHELTH

XP_028075737.1 uncharacterized protein LOC114277953 [Camellia sinensis]2.2e-4445.21Show/hide
Query:  MVFLSETKVHSSRFELLKVRLGFVNCFSVSSVGRSGGLALLWNPEVRFSLLSYSPNHIDGWV--DGGVNPWRFSRIYGFPQAELKGRTWSLLKHLRGNSG
        MVFL ETK+ +   E ++ +LG   CF+V  VG SGGLALLW  E++  + S+S  H+D  +  + GV  W F+  YG P A L+  +W LL+ L+    
Subjt:  MVFLSETKVHSSRFELLKVRLGFVNCFSVSSVGRSGGLALLWNPEVRFSLLSYSPNHIDGWV--DGGVNPWRFSRIYGFPQAELKGRTWSLLKHLRGNSG

Query:  TPWLVGGDFNAILSHQEKEGGRAKAEAELSGFQGAIDDCELLDLGFRGAAFTWCNGRPGEEIVWERIDRCLSNVAWQELFPVHELTHL
         PWL  GDFN IL   EK G  A+++ ++ GF+  + DC+L DLGF GAAFTWCNGR G+ ++ ER+DRC+ N  W   FP+  + HL
Subjt:  TPWLVGGDFNAILSHQEKEGGRAKAEAELSGFQGAIDDCELLDLGFRGAAFTWCNGRPGEEIVWERIDRCLSNVAWQELFPVHELTHL

XP_040987679.1 uncharacterized protein LOC121235397 [Juglans microcarpa x Juglans regia]9.7e-4543.62Show/hide
Query:  MVFLSETKVHSSRFELLKVRLGFVNCFSVSSVGRSGGLALLWNPEVRFSLLSYSPNHIDGWVDGGV---NPWRFSRIYGFPQAELKGRTWSLLKHLRGNS
        ++FL ETK+H+   E LK RLGF NC +VSS GRSGGLAL W  +V+  + +YS +HI   +   +     W  + IYG P+A  +  TW L++ L+   
Subjt:  MVFLSETKVHSSRFELLKVRLGFVNCFSVSSVGRSGGLALLWNPEVRFSLLSYSPNHIDGWVDGGV---NPWRFSRIYGFPQAELKGRTWSLLKHLRGNS

Query:  GTPWLVGGDFNAILSHQEKEGGRAKAEAELSGFQGAIDDCELLDLGFRGAAFTWCNGRPGEEIVWERIDRCLSNVAWQELFPVHELTH
           WL+ GDFN +LS+ EK GGR  ++ ++  FQ  +D+CEL+DLGF+G  FTWCN R  ++ + ER+DRCL+++ W+  FP+ ++ H
Subjt:  GTPWLVGGDFNAILSHQEKEGGRAKAEAELSGFQGAIDDCELLDLGFRGAAFTWCNGRPGEEIVWERIDRCLSNVAWQELFPVHELTH

XP_042972796.1 uncharacterized protein LOC122304603 [Carya illinoinensis]4.8e-4445.45Show/hide
Query:  MVFLSETKVHSSRFELLKVRLGFVNCFSVSSVGRSGGLALLWNPEVRFSLLSYSPNHIDGWVDG--GVNPWRFSRIYGFPQAELKGRTWSLLKHLRGNSG
        ++FL ETK+ S + E ++VR+GF  CF V+S GR GG+ALLW  E++ S+ S+S  HID  + G  G   W+F+ +YG  + E +  TWSLL+ LR    
Subjt:  MVFLSETKVHSSRFELLKVRLGFVNCFSVSSVGRSGGLALLWNPEVRFSLLSYSPNHIDGWVDG--GVNPWRFSRIYGFPQAELKGRTWSLLKHLRGNSG

Query:  TPWLVGGDFNAILSHQEKEGGRAKAEAELSGFQGAIDDCELLDLGFRGAAFTWCNGRPGEEIVWERIDRCLSNVAWQELFPVHELTH
         PWLV GDFN +LS QEK GGR + E  +  F+  +DDC L+DLGF+G  +TWCN R  + +V ER+DR ++   W+  FP+  + H
Subjt:  TPWLVGGDFNAILSHQEKEGGRAKAEAELSGFQGAIDDCELLDLGFRGAAFTWCNGRPGEEIVWERIDRCLSNVAWQELFPVHELTH

XP_042988712.1 uncharacterized protein LOC122316247 [Carya illinoinensis]1.5e-4545.99Show/hide
Query:  MVFLSETKVHSSRFELLKVRLGFVNCFSVSSVGRSGGLALLWNPEVRFSLLSYSPNHIDGWVDGGVN--PWRFSRIYGFPQAELKGRTWSLLKHLRGNSG
        ++FL ETK+H ++ E +K  LG+  CF+VSS GRSGGLAL+W  E   ++ SYS NHID  +    +   W+F+ +YG P  EL+  TW+ ++ LRG   
Subjt:  MVFLSETKVHSSRFELLKVRLGFVNCFSVSSVGRSGGLALLWNPEVRFSLLSYSPNHIDGWVDGGVN--PWRFSRIYGFPQAELKGRTWSLLKHLRGNSG

Query:  TPWLVGGDFNAILSHQEKEGGRAKAEAELSGFQGAIDDCELLDLGFRGAAFTWCNGRPGEEIVWERIDRCLSNVAWQELFPVHELTH
         PWLV GDFN +L  QEK GGR + E ++  F+  +DDC  +DLGF G  FTWCN R  +  V ER+DR L+N  W + FP   + H
Subjt:  TPWLVGGDFNAILSHQEKEGGRAKAEAELSGFQGAIDDCELLDLGFRGAAFTWCNGRPGEEIVWERIDRCLSNVAWQELFPVHELTH

TrEMBL top hitse value%identityAlignment
A0A2I4DZH7 uncharacterized protein LOC1089849032.8e-4243.09Show/hide
Query:  MVFLSETKVHSSRFELLKVRLGFVNCFSVSSVGRSGGLALLWNPEVRFSLLSYSPNHIDGWVDGGV---NPWRFSRIYGFPQAELKGRTWSLLKHLRGNS
        ++FL ET++ +   E  K +LGF NC  +SS GR GG+ALLW+ E+  S+++YS NH+D  +         W  + IYGFP+  L+  +W+L+K L  ++
Subjt:  MVFLSETKVHSSRFELLKVRLGFVNCFSVSSVGRSGGLALLWNPEVRFSLLSYSPNHIDGWVDGGV---NPWRFSRIYGFPQAELKGRTWSLLKHLRGNS

Query:  GTPWLVGGDFNAILSHQEKEGGRAKAEAELSGFQGAIDDCELLDLGFRGAAFTWCNGRPGEEIVWERIDRCLSNVAWQELFPVHELTH
          PWLV GDFN IL   EK GG  + E +L  F+  +D C L DLG+ G  FTW N R G++ + ER+DRCL N  W   FP   +TH
Subjt:  GTPWLVGGDFNAILSHQEKEGGRAKAEAELSGFQGAIDDCELLDLGFRGAAFTWCNGRPGEEIVWERIDRCLSNVAWQELFPVHELTH

A0A2N9EH45 Reverse transcriptase domain-containing protein6.3e-4244.68Show/hide
Query:  MVFLSETKVHSSRFELLKVRLGFVNCFSVSSVGRSGGLALLWNPEVRFSLLSYSPNHIDGWV--DGGVNPWRFSRIYGFPQAELKGRTWSLLKHLRGNSG
        ++FL ETK+ S + E+L+V+L F  CF+V S+GRSGGLALLWN   +  + ++S NHID  V  D G+  WRF+  YGFP+   K  +W+L+  L G S 
Subjt:  MVFLSETKVHSSRFELLKVRLGFVNCFSVSSVGRSGGLALLWNPEVRFSLLSYSPNHIDGWV--DGGVNPWRFSRIYGFPQAELKGRTWSLLKHLRGNSG

Query:  TPWLVGGDFNAILSHQEKEGGRAKAEAELSGFQGAIDDCELLDLGFRGAAFTWCNGRPGEEIVWERIDRCLSNVAWQELFPVHELTHL
         PWL  GD+N I+S +E+ G  + + A L  F   ++ CEL+DLGFRG  FTW N R G  +V +R+DR ++NV W ++F +  ++H+
Subjt:  TPWLVGGDFNAILSHQEKEGGRAKAEAELSGFQGAIDDCELLDLGFRGAAFTWCNGRPGEEIVWERIDRCLSNVAWQELFPVHELTHL

A0A2N9HPA9 Reverse transcriptase domain-containing protein4.8e-4245.45Show/hide
Query:  MVFLSETKVHSSRFELLKVRLGFVNCFSVSSVGRSGGLALLWNPEVRFSLLSYSPNHIDGWVDGGVNP-WRFSRIYGFPQAELKGRTWSLLKHLRGNSGT
        ++FL ETK+ + R E ++V+LGF N F+V S+GRSGGLALLW  E+   +  +S +HID  V+      WR +  YG P+   +  +W+LLKHL      
Subjt:  MVFLSETKVHSSRFELLKVRLGFVNCFSVSSVGRSGGLALLWNPEVRFSLLSYSPNHIDGWVDGGVNP-WRFSRIYGFPQAELKGRTWSLLKHLRGNSGT

Query:  PWLVGGDFNAILSHQEKEGGRAKAEAELSGFQGAIDDCELLDLGFRGAAFTWCNGRPGEEIVWERIDRCLSNVAWQELFPVHELTHL
        PWL  GDFN ILS  EK GGR +   ++  FQ A + C+L+DLGF+GAAFTW N R  E  V  R+DR ++   W E FP +++TH+
Subjt:  PWLVGGDFNAILSHQEKEGGRAKAEAELSGFQGAIDDCELLDLGFRGAAFTWCNGRPGEEIVWERIDRCLSNVAWQELFPVHELTHL

A0A2N9HS57 Reverse transcriptase domain-containing protein1.7e-4243.39Show/hide
Query:  MVFLSETKVHSSRFELLKVRLGFVNCFSVSSVGRSGGLALLWNPEVRFSLLSYSPNHIDGWVDG-GVNPWRFSRIYGFPQAELKGRTWSLLKHLRGNSGT
        ++FL ETK+ + R E+++++LGF N F+V S+GRSGGLALLW  E    + ++S +HID  VD    N WR +  YG P+   +  +W+LLKHL G  G 
Subjt:  MVFLSETKVHSSRFELLKVRLGFVNCFSVSSVGRSGGLALLWNPEVRFSLLSYSPNHIDGWVDG-GVNPWRFSRIYGFPQAELKGRTWSLLKHLRGNSGT

Query:  PWLVGGDFNAILSHQEKEGGRAKAEAELSGFQGAIDDCELLDLGFRGAAFTWCNGRPGEEIVWERIDRCLSNVAWQELFPVHELTHLDL
        PW   GDFN IL   EK GGR ++  ++  FQ A++ C L+DLGF+GA +TW N R  +  +  R+DR L+   W + FP + ++HL +
Subjt:  PWLVGGDFNAILSHQEKEGGRAKAEAELSGFQGAIDDCELLDLGFRGAAFTWCNGRPGEEIVWERIDRCLSNVAWQELFPVHELTHLDL

A0A803PHH5 Uncharacterized protein9.7e-4344.15Show/hide
Query:  MVFLSETKVHSSRFELLKVRLGFVNCFSVSSVGRSGGLALLWNPEVRFSLLSYSPNHIDGWVDGGVNP-WRFSRIYGFPQAELKGRTWSLLKHLRGNSGT
        +VFLSE++++  R E L+V LGFV CF V + G+SGGL LLW+ ++  S+LS+S  HID ++    N  WRF+  YG P    +G +W+LL  +      
Subjt:  MVFLSETKVHSSRFELLKVRLGFVNCFSVSSVGRSGGLALLWNPEVRFSLLSYSPNHIDGWVDGGVNP-WRFSRIYGFPQAELKGRTWSLLKHLRGNSGT

Query:  PWLVGGDFNAILSHQEKEGGRAKAEAELSGFQGAIDDCELLDLGFRGAAFTWCNGRPGEEIVWERIDRCLSNVAWQELFPVHELTHLD
        PW++GGDFN IL  +EK+GG  K    ++ F+ A+DDC L ++ F G  FTWCNGR  E +++ER+DR   N  W +LFP  ++ HL+
Subjt:  PWLVGGDFNAILSHQEKEGGRAKAEAELSGFQGAIDDCELLDLGFRGAAFTWCNGRPGEEIVWERIDRCLSNVAWQELFPVHELTHLD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTTCCTGTCAGAGACCAAGGTTCACTCGTCACGTTTTGAGCTTCTCAAGGTGAGATTGGGGTTTGTTAACTGTTTTAGTGTGAGCAGTGTTGGGAGAAGTGGGGG
TCTAGCGTTGCTGTGGAACCCTGAGGTTCGGTTCAGTCTTCTGTCGTACTCCCCCAATCACATAGATGGGTGGGTGGACGGAGGGGTGAATCCGTGGCGGTTTTCTAGGA
TTTATGGGTTTCCTCAAGCAGAATTAAAGGGGAGGACTTGGTCGCTATTGAAGCACTTGCGTGGGAATTCAGGGACACCGTGGTTAGTGGGTGGTGATTTCAATGCCATT
TTATCCCACCAGGAGAAGGAAGGTGGCAGGGCCAAGGCAGAGGCTGAATTGTCAGGTTTCCAGGGTGCCATAGATGACTGTGAGTTACTTGACTTGGGTTTTAGGGGGGC
TGCCTTCACTTGGTGTAATGGGAGGCCGGGGGAGGAAATAGTTTGGGAGAGGATTGACAGATGTCTGAGTAATGTTGCTTGGCAGGAGCTGTTTCCAGTGCATGAGTTGA
CACACCTGGATTTAGTCGGTCGGACCACAGGCCTCTTTTGCTTCGATGTCAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGTTCCTGTCAGAGACCAAGGTTCACTCGTCACGTTTTGAGCTTCTCAAGGTGAGATTGGGGTTTGTTAACTGTTTTAGTGTGAGCAGTGTTGGGAGAAGTGGGGG
TCTAGCGTTGCTGTGGAACCCTGAGGTTCGGTTCAGTCTTCTGTCGTACTCCCCCAATCACATAGATGGGTGGGTGGACGGAGGGGTGAATCCGTGGCGGTTTTCTAGGA
TTTATGGGTTTCCTCAAGCAGAATTAAAGGGGAGGACTTGGTCGCTATTGAAGCACTTGCGTGGGAATTCAGGGACACCGTGGTTAGTGGGTGGTGATTTCAATGCCATT
TTATCCCACCAGGAGAAGGAAGGTGGCAGGGCCAAGGCAGAGGCTGAATTGTCAGGTTTCCAGGGTGCCATAGATGACTGTGAGTTACTTGACTTGGGTTTTAGGGGGGC
TGCCTTCACTTGGTGTAATGGGAGGCCGGGGGAGGAAATAGTTTGGGAGAGGATTGACAGATGTCTGAGTAATGTTGCTTGGCAGGAGCTGTTTCCAGTGCATGAGTTGA
CACACCTGGATTTAGTCGGTCGGACCACAGGCCTCTTTTGCTTCGATGTCAGATAG
Protein sequenceShow/hide protein sequence
MVFLSETKVHSSRFELLKVRLGFVNCFSVSSVGRSGGLALLWNPEVRFSLLSYSPNHIDGWVDGGVNPWRFSRIYGFPQAELKGRTWSLLKHLRGNSGTPWLVGGDFNAI
LSHQEKEGGRAKAEAELSGFQGAIDDCELLDLGFRGAAFTWCNGRPGEEIVWERIDRCLSNVAWQELFPVHELTHLDLVGRTTGLFCFDVR