CuGenDBv2

Gene ID	Lag0008647
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	histone-lysine N-methyltransferase CLF
Genome location	chr9:27223270..27223960
RNA-Seq Expression	Lag0008647
Synteny	Lag0008647
Gene Ontology terms	GO:0006349 - regulation of gene expression by genetic imprinting (biological process) GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0009294 - DNA mediated transformation (biological process) GO:0009737 - response to abscisic acid (biological process) GO:0009909 - regulation of flower development (biological process) GO:0009965 - leaf morphogenesis (biological process) GO:0031507 - heterochromatin assembly (biological process) GO:0048586 - regulation of long-day photoperiodism, flowering (biological process) GO:0070734 - histone H3-K27 methylation (biological process) GO:1900055 - regulation of leaf senescence (biological process) GO:1990110 - callus formation (biological process) GO:0005677 - chromatin silencing complex (cellular component) GO:0031519 - PcG protein complex (cellular component) GO:0003727 - single-stranded RNA binding (molecular function) GO:0018024 - histone-lysine N-methyltransferase activity (molecular function)
InterPro domains	IPR025778 - Histone-lysine N-methyltransferase

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008457756.1 PREDICTED: histone-lysine N-methyltransferase CLF isoform X1 [Cucumis melo]

1.7e-67

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Query:  MKPQGQDPTPKEILSVIDFLKKQVAGERCNSIQRRMEENKQKLVGITTHLLKSSTERRIRRINDSDKGVDLLTKRQKDALDMQNGIDVSDGENDRSQEDG
        +KPQGQDPTPKEILSVI+FLKKQVAGERCNS+Q+RMEENKQKL GITTHLLKSSTERRIRR++DSDKGVDLLTKRQKDALDMQNGIDVSDGENDRSQEDG
Subjt:  MKPQGQDPTPKEILSVIDFLKKQVAGERCNSIQRRMEENKQKLVGITTHLLKSSTERRIRRINDSDKGVDLLTKRQKDALDMQNGIDVSDGENDRSQEDG

Query:  HASSAVLLGSNVAVRNAVRPIKLPEVKRLPPYTTWIFLDR
        HASSAVLLGSNVAVRNAVRPIKLPEVKRLPPYTTWIFLDR
Subjt:  HASSAVLLGSNVAVRNAVRPIKLPEVKRLPPYTTWIFLDR

XP_022947255.1 histone-lysine N-methyltransferase CLF-like isoform X1 [Cucurbita moschata]

1.9e-66

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Query:  MKPQGQDPTPKEILSVIDFLKKQVAGERCNSIQRRMEENKQKLVGITTHLLKSSTERRIRRINDSDKGVDLLTKRQKDALDMQNGIDVSDGENDRSQEDG
        MKP+GQDP+PKEILSVIDFLKKQVAGERCNSIQ+RMEENKQKLV ITTHLLKSS ERRIRRI+DSDKGVDLLTKRQKDALDMQNGIDVSDGEND+SQEDG
Subjt:  MKPQGQDPTPKEILSVIDFLKKQVAGERCNSIQRRMEENKQKLVGITTHLLKSSTERRIRRINDSDKGVDLLTKRQKDALDMQNGIDVSDGENDRSQEDG

Query:  HASSAVLLGSNVAVRNAVRPIKLPEVKRLPPYTTWIFLDR
        HASSAVLLGSNVAVRNAVRPIKLPEVKRLPPYTTWIFLDR
Subjt:  HASSAVLLGSNVAVRNAVRPIKLPEVKRLPPYTTWIFLDR

XP_022947256.1 histone-lysine N-methyltransferase CLF-like isoform X2 [Cucurbita moschata]

1.9e-66

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Query:  MKPQGQDPTPKEILSVIDFLKKQVAGERCNSIQRRMEENKQKLVGITTHLLKSSTERRIRRINDSDKGVDLLTKRQKDALDMQNGIDVSDGENDRSQEDG
        MKP+GQDP+PKEILSVIDFLKKQVAGERCNSIQ+RMEENKQKLV ITTHLLKSS ERRIRRI+DSDKGVDLLTKRQKDALDMQNGIDVSDGEND+SQEDG
Subjt:  MKPQGQDPTPKEILSVIDFLKKQVAGERCNSIQRRMEENKQKLVGITTHLLKSSTERRIRRINDSDKGVDLLTKRQKDALDMQNGIDVSDGENDRSQEDG

Query:  HASSAVLLGSNVAVRNAVRPIKLPEVKRLPPYTTWIFLDR
        HASSAVLLGSNVAVRNAVRPIKLPEVKRLPPYTTWIFLDR
Subjt:  HASSAVLLGSNVAVRNAVRPIKLPEVKRLPPYTTWIFLDR

XP_022947257.1 histone-lysine N-methyltransferase CLF-like isoform X3 [Cucurbita moschata]

1.9e-66

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Query:  MKPQGQDPTPKEILSVIDFLKKQVAGERCNSIQRRMEENKQKLVGITTHLLKSSTERRIRRINDSDKGVDLLTKRQKDALDMQNGIDVSDGENDRSQEDG
        MKP+GQDP+PKEILSVIDFLKKQVAGERCNSIQ+RMEENKQKLV ITTHLLKSS ERRIRRI+DSDKGVDLLTKRQKDALDMQNGIDVSDGEND+SQEDG
Subjt:  MKPQGQDPTPKEILSVIDFLKKQVAGERCNSIQRRMEENKQKLVGITTHLLKSSTERRIRRINDSDKGVDLLTKRQKDALDMQNGIDVSDGENDRSQEDG

Query:  HASSAVLLGSNVAVRNAVRPIKLPEVKRLPPYTTWIFLDR
        HASSAVLLGSNVAVRNAVRPIKLPEVKRLPPYTTWIFLDR
Subjt:  HASSAVLLGSNVAVRNAVRPIKLPEVKRLPPYTTWIFLDR

XP_023006978.1 histone-lysine N-methyltransferase CLF-like isoform X2 [Cucurbita maxima]

1.9e-66

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Query:  MKPQGQDPTPKEILSVIDFLKKQVAGERCNSIQRRMEENKQKLVGITTHLLKSSTERRIRRINDSDKGVDLLTKRQKDALDMQNGIDVSDGENDRSQEDG
        MKPQGQDP PKEILSVIDFLKKQVAGERCNSIQ+RMEENKQKLV ITTHLLKSS ERRIRR++DSDKGVDLLTKRQKDALDMQNGIDVSDGEND+SQEDG
Subjt:  MKPQGQDPTPKEILSVIDFLKKQVAGERCNSIQRRMEENKQKLVGITTHLLKSSTERRIRRINDSDKGVDLLTKRQKDALDMQNGIDVSDGENDRSQEDG

Query:  HASSAVLLGSNVAVRNAVRPIKLPEVKRLPPYTTWIFLDR
        HASSAVLLGSNVAVRNAVRPIKLPEVKRLPPYTTWIFLDR
Subjt:  HASSAVLLGSNVAVRNAVRPIKLPEVKRLPPYTTWIFLDR

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C6D8 histone-lysine N-methyltransferase CLF isoform X1

8.2e-68

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Query:  MKPQGQDPTPKEILSVIDFLKKQVAGERCNSIQRRMEENKQKLVGITTHLLKSSTERRIRRINDSDKGVDLLTKRQKDALDMQNGIDVSDGENDRSQEDG
        +KPQGQDPTPKEILSVI+FLKKQVAGERCNS+Q+RMEENKQKL GITTHLLKSSTERRIRR++DSDKGVDLLTKRQKDALDMQNGIDVSDGENDRSQEDG
Subjt:  MKPQGQDPTPKEILSVIDFLKKQVAGERCNSIQRRMEENKQKLVGITTHLLKSSTERRIRRINDSDKGVDLLTKRQKDALDMQNGIDVSDGENDRSQEDG

Query:  HASSAVLLGSNVAVRNAVRPIKLPEVKRLPPYTTWIFLDR
        HASSAVLLGSNVAVRNAVRPIKLPEVKRLPPYTTWIFLDR
Subjt:  HASSAVLLGSNVAVRNAVRPIKLPEVKRLPPYTTWIFLDR

A0A5D3BI74 Histone-lysine N-methyltransferase CLF isoform X1

8.2e-68

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Query:  MKPQGQDPTPKEILSVIDFLKKQVAGERCNSIQRRMEENKQKLVGITTHLLKSSTERRIRRINDSDKGVDLLTKRQKDALDMQNGIDVSDGENDRSQEDG
        +KPQGQDPTPKEILSVI+FLKKQVAGERCNS+Q+RMEENKQKL GITTHLLKSSTERRIRR++DSDKGVDLLTKRQKDALDMQNGIDVSDGENDRSQEDG
Subjt:  MKPQGQDPTPKEILSVIDFLKKQVAGERCNSIQRRMEENKQKLVGITTHLLKSSTERRIRRINDSDKGVDLLTKRQKDALDMQNGIDVSDGENDRSQEDG

Query:  HASSAVLLGSNVAVRNAVRPIKLPEVKRLPPYTTWIFLDR
        HASSAVLLGSNVAVRNAVRPIKLPEVKRLPPYTTWIFLDR
Subjt:  HASSAVLLGSNVAVRNAVRPIKLPEVKRLPPYTTWIFLDR

A0A6J1G6C9 histone-lysine N-methyltransferase CLF-like isoform X1

9.1e-67

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Query:  MKPQGQDPTPKEILSVIDFLKKQVAGERCNSIQRRMEENKQKLVGITTHLLKSSTERRIRRINDSDKGVDLLTKRQKDALDMQNGIDVSDGENDRSQEDG
        MKP+GQDP+PKEILSVIDFLKKQVAGERCNSIQ+RMEENKQKLV ITTHLLKSS ERRIRRI+DSDKGVDLLTKRQKDALDMQNGIDVSDGEND+SQEDG
Subjt:  MKPQGQDPTPKEILSVIDFLKKQVAGERCNSIQRRMEENKQKLVGITTHLLKSSTERRIRRINDSDKGVDLLTKRQKDALDMQNGIDVSDGENDRSQEDG

Query:  HASSAVLLGSNVAVRNAVRPIKLPEVKRLPPYTTWIFLDR
        HASSAVLLGSNVAVRNAVRPIKLPEVKRLPPYTTWIFLDR
Subjt:  HASSAVLLGSNVAVRNAVRPIKLPEVKRLPPYTTWIFLDR

A0A6J1KX96 histone-lysine N-methyltransferase CLF-like isoform X1

9.1e-67

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Query:  MKPQGQDPTPKEILSVIDFLKKQVAGERCNSIQRRMEENKQKLVGITTHLLKSSTERRIRRINDSDKGVDLLTKRQKDALDMQNGIDVSDGENDRSQEDG
        MKPQGQDP PKEILSVIDFLKKQVAGERCNSIQ+RMEENKQKLV ITTHLLKSS ERRIRR++DSDKGVDLLTKRQKDALDMQNGIDVSDGEND+SQEDG
Subjt:  MKPQGQDPTPKEILSVIDFLKKQVAGERCNSIQRRMEENKQKLVGITTHLLKSSTERRIRRINDSDKGVDLLTKRQKDALDMQNGIDVSDGENDRSQEDG

Query:  HASSAVLLGSNVAVRNAVRPIKLPEVKRLPPYTTWIFLDR
        HASSAVLLGSNVAVRNAVRPIKLPEVKRLPPYTTWIFLDR
Subjt:  HASSAVLLGSNVAVRNAVRPIKLPEVKRLPPYTTWIFLDR

A0A6J1L6F8 histone-lysine N-methyltransferase CLF-like isoform X2

9.1e-67

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Query:  MKPQGQDPTPKEILSVIDFLKKQVAGERCNSIQRRMEENKQKLVGITTHLLKSSTERRIRRINDSDKGVDLLTKRQKDALDMQNGIDVSDGENDRSQEDG
        MKPQGQDP PKEILSVIDFLKKQVAGERCNSIQ+RMEENKQKLV ITTHLLKSS ERRIRR++DSDKGVDLLTKRQKDALDMQNGIDVSDGEND+SQEDG
Subjt:  MKPQGQDPTPKEILSVIDFLKKQVAGERCNSIQRRMEENKQKLVGITTHLLKSSTERRIRRINDSDKGVDLLTKRQKDALDMQNGIDVSDGENDRSQEDG

Query:  HASSAVLLGSNVAVRNAVRPIKLPEVKRLPPYTTWIFLDR
        HASSAVLLGSNVAVRNAVRPIKLPEVKRLPPYTTWIFLDR
Subjt:  HASSAVLLGSNVAVRNAVRPIKLPEVKRLPPYTTWIFLDR

SwissProt top hits

e value

%identity

Alignment

P93831 Histone-lysine N-methyltransferase CLF

3.1e-27

49.62

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Query:  PTPKEILSVIDFLKKQVAGERCNSIQRRMEENKQKLVGITTHLLKSSTERRIRRINDSDKGVDLLTKRQKDALDMQNGIDVSDGENDRSQEDGHASSAVL
        P  KE+  VI+ LKK++A +RC SI++R++ENK+ L  IT   ++SS ER          G DLL KRQ+D+  M++GID S+  N+R  EDG ASS ++
Subjt:  PTPKEILSVIDFLKKQVAGERCNSIQRRMEENKQKLVGITTHLLKSSTERRIRRINDSDKGVDLLTKRQKDALDMQNGIDVSDGENDRSQEDGHASSAVL

Query:  LGSNVAVRNAVRPIKLPEVKRLPPYTTWIFLDR
         GS+V V+ ++RPIK+P++KRL PYTTW+FLDR
Subjt:  LGSNVAVRNAVRPIKLPEVKRLPPYTTWIFLDR

Q5VN06 Histone-lysine N-methyltransferase CLF

3.5e-23

47.66

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Query:  ILSVIDFLKKQVAGERCNSIQRRMEENKQKLVGITTHLLKSSTERRIRRINDSDKGVDLLTKRQKDALDMQNGIDVSDGENDRSQEDGHASSAVLLGSNV
        +L VID LKK++  +R   IQ+R+EEN  KL  IT H    S  R+    N +D   +LLTKR++DAL   N  + S  E++ +      SS V++G N+
Subjt:  ILSVIDFLKKQVAGERCNSIQRRMEENKQKLVGITTHLLKSSTERRIRRINDSDKGVDLLTKRQKDALDMQNGIDVSDGENDRSQEDGHASSAVLLGSNV

Query:  AVRNAVRPIKLPEVKRLPPYTTWIFLDR
        + RN+VRPI+LPEV  LPPYTTWIFLDR
Subjt:  AVRNAVRPIKLPEVKRLPPYTTWIFLDR

Q8S4P4 Histone-lysine N-methyltransferase EZ3

2.1e-07

28.97

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Query:  GQDPTPKEILSV---IDFLKKQVAGERCNSIQRRMEENKQKLVGITTHLLKSSTERRIRRINDSDKGVDLLTKRQKDALDMQNGIDVSDGENDRS----Q
        G++  P  ++ +   +  L +Q+   R   I+ ++E N++ L   +  L   +    +   +    G + L++R  +      G D++ G  +R     Q
Subjt:  GQDPTPKEILSV---IDFLKKQVAGERCNSIQRRMEENKQKLVGITTHLLKSSTERRIRRINDSDKGVDLLTKRQKDALDMQNGIDVSDGENDRS----Q

Query:  EDGHASSAVLLGSN--VAVRNAVRPIKLPEVKRLPPYTTWIFLDR
        E+  AS  ++L S+   A R  VR +KLP V+R+PPYTTWIFLD+
Subjt:  EDGHASSAVLLGSN--VAVRNAVRPIKLPEVKRLPPYTTWIFLDR

Q8S4P5 Histone-lysine N-methyltransferase EZ2

1.7e-06

31.5

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Query:  LKKQVAGERCNSIQRRMEENKQKLVGITTHLLKSSTERRIRRINDSDKGVDLLTKRQKDALDMQNGIDVSDGENDRS----QEDGHASSAVLLGSN--VA
        L +QV   R   I+ ++E N++ L   +  L   +    +     + +G D      + A + Q G D+++G  +R     QE+  A+  + L S+   A
Subjt:  LKKQVAGERCNSIQRRMEENKQKLVGITTHLLKSSTERRIRRINDSDKGVDLLTKRQKDALDMQNGIDVSDGENDRS----QEDGHASSAVLLGSN--VA

Query:  VRNAVRPIKLPEVKRLPPYTTWIFLDR
         R  VR +KLP V+++PPYTTWIFLD+
Subjt:  VRNAVRPIKLPEVKRLPPYTTWIFLDR

Q8S4P6 Histone-lysine N-methyltransferase EZ1

3.6e-20

43.94

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Query:  ILSVIDFLKKQVAGERCNSIQRRMEENKQKLVGITTHLLKSSTERRIRRINDSDKGVDLLTKRQKDALDMQNGIDVSDGENDR---SQEDGHASSAVLLG
        +LSVID LKK++  +R   I+ R+ ENK  +   T      S  R+I     +D   +LLTKRQ DAL   + +D+   + D      E   +SS V+ G
Subjt:  ILSVIDFLKKQVAGERCNSIQRRMEENKQKLVGITTHLLKSSTERRIRRINDSDKGVDLLTKRQKDALDMQNGIDVSDGENDR---SQEDGHASSAVLLG

Query:  SNVAVRNA-VRPIKLPEVKRLPPYTTWIFLDR
         N+  +NA +RPIKLPEV +LPPYTTWIFLDR
Subjt:  SNVAVRNA-VRPIKLPEVKRLPPYTTWIFLDR

Arabidopsis top hits

e value

%identity

Alignment

AT2G23380.1 SET domain-containing protein

2.2e-28

49.62

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Query:  PTPKEILSVIDFLKKQVAGERCNSIQRRMEENKQKLVGITTHLLKSSTERRIRRINDSDKGVDLLTKRQKDALDMQNGIDVSDGENDRSQEDGHASSAVL
        P  KE+  VI+ LKK++A +RC SI++R++ENK+ L  IT   ++SS ER          G DLL KRQ+D+  M++GID S+  N+R  EDG ASS ++
Subjt:  PTPKEILSVIDFLKKQVAGERCNSIQRRMEENKQKLVGITTHLLKSSTERRIRRINDSDKGVDLLTKRQKDALDMQNGIDVSDGENDRSQEDGHASSAVL

Query:  LGSNVAVRNAVRPIKLPEVKRLPPYTTWIFLDR
         GS+V V+ ++RPIK+P++KRL PYTTW+FLDR
Subjt:  LGSNVAVRNAVRPIKLPEVKRLPPYTTWIFLDR

AT4G02020.1 SET domain-containing protein

2.8e-07

30.58

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Query:  LKKQVAGERCNSIQRRMEENKQKLVGITTHLLKSSTERRIRRINDSDKGVDLLTKRQKDALDMQNGIDVSDGENDRSQEDGHASSAVLLGSNVAVRNAVR
        LK+++ GER  SI+ + E N++K   +  H+   S+    R   + +   ++L+ R +  L   NG     G+ D        S++V             
Subjt:  LKKQVAGERCNSIQRRMEENKQKLVGITTHLLKSSTERRIRRINDSDKGVDLLTKRQKDALDMQNGIDVSDGENDRSQEDGHASSAVLLGSNVAVRNAVR

Query:  PIKLPEVKRLPPYTTWIFLDR
          KLP  +R+PPYTTWIFLDR
Subjt:  PIKLPEVKRLPPYTTWIFLDR

Sequences

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CDS sequence

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ATGAAACCACAAGGACAAGATCCTACTCCTAAGGAGATCTTATCAGTCATTGATTTTCTAAAGAAGCAAGTTGCTGGTGAACGTTGTAACTCCATACAGAGAAGAATGGA
GGAAAACAAGCAGAAGTTGGTTGGCATCACCACTCACTTGTTGAAATCATCAACAGAAAGAAGGATAAGAAGGATAAATGATTCAGATAAGGGAGTGGATCTATTGACAA
AAAGGCAGAAAGATGCACTTGATATGCAGAATGGTATAGATGTAAGTGATGGGGAAAATGACCGATCTCAAGAAGATGGCCATGCATCTTCTGCGGTTCTTCTTGGATCT
AATGTTGCAGTTAGAAATGCTGTTCGACCAATTAAGCTTCCTGAAGTTAAAAGATTACCTCCTTATACTACATGGATATTTTTGGACAGAGTCTTAGGGGTTGTATAA

mRNA sequence

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Protein sequence

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MKPQGQDPTPKEILSVIDFLKKQVAGERCNSIQRRMEENKQKLVGITTHLLKSSTERRIRRINDSDKGVDLLTKRQKDALDMQNGIDVSDGENDRSQEDGHASSAVLLGS
NVAVRNAVRPIKLPEVKRLPPYTTWIFLDRVLGVV

Lag0008647 (gene) of Sponge gourd (AG-4) v1 genome