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Lag0008669 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008669
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationchr9:27661389..27662549
RNA-Seq ExpressionLag0008669
SyntenyLag0008669
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY08849.1 Uncharacterized protein TCM_024087 [Theobroma cacao]5.7e-0635.29Show/hide
Query:  IADHGWKLFCVKPESVNAQVVREFYANIAKEMVPGDC--SRSRVAAVEDREKTFQSAYLSREANTWMSFIRQRLLSTTHDSTVSREQVLLAFAILRSLSI
        I D  W  FC +P++    VVREFYAN+  E V G      ++     D   +F+ + + +E   W+ F+  RLLS+TH S V++++ +L +AI+   SI
Subjt:  IADHGWKLFCVKPESVNAQVVREFYANIAKEMVPGDC--SRSRVAAVEDREKTFQSAYLSREANTWMSFIRQRLLSTTHDSTVSREQVLLAFAILRSLSI

Query:  NV
        +V
Subjt:  NV

EXC33712.1 hypothetical protein L484_008956 [Morus notabilis]1.1e-0428.1Show/hide
Query:  ERGF---SGDLPHILRTGIADHGWKLFCVKPESVNAQVVREFYANIAKEMVPGDC-SRSRVAAVEDREKTFQSAYLSREANTWMSFIRQRLLSTTHDSTV
        ERGF   +G+LP  +   I D GW+ FC +P +   Q  +       +E++   C   +R    ++ E  F++ YL+     W  F+  RL+ +TH S V
Subjt:  ERGF---SGDLPHILRTGIADHGWKLFCVKPESVNAQVVREFYANIAKEMVPGDC-SRSRVAAVEDREKTFQSAYLSREANTWMSFIRQRLLSTTHDSTV

Query:  SREQVLLAFAILRSLSINVERQALTFWNYVMTRDANLKKALQE-NFSKPYPAL
        ++++ L+  AI +   +NV              ++ +  AL++ N S PYP+L
Subjt:  SREQVLLAFAILRSLSINVERQALTFWNYVMTRDANLKKALQE-NFSKPYPAL

KAE8712804.1 hypothetical protein F3Y22_tig00110223pilonHSYRG00028 [Hibiscus syriacus]1.1e-0427.1Show/hide
Query:  ELRESSKIRWLLKRDFLFERGF------SGDLPHILRTGIADHGWKLFCVKPESVNAQVVREFYANIAKE-----MVPGDCSRSRVAAV-----------
        ++    + + +  R   FE GF        DL   +   +  H WK F   P +VNA +V+EFY+NI +      MV G   R    A+           
Subjt:  ELRESSKIRWLLKRDFLFERGF------SGDLPHILRTGIADHGWKLFCVKPESVNAQVVREFYANIAKE-----MVPGDCSRSRVAAV-----------

Query:  EDREKTFQSAYLSREANTWMSFIRQRLLSTTHDSTVSREQVLLAFAILRSLSINV
        + R +T     L      W  F++ +LL T+H++TVS ++++L  +I+  L+I++
Subjt:  EDREKTFQSAYLSREANTWMSFIRQRLLSTTHDSTVSREQVLLAFAILRSLSINV

PIN01090.1 hypothetical protein CDL12_26404 [Handroanthus impetiginosus]9.8e-0629.27Show/hide
Query:  LLKRDFLFERGFSGDLPH--ILRTGIADHGWKLFCVKPESVNAQVVREFYANIA-----KEMVPG-DCSRSRV---------------------------
        +L+R F+ ERG     PH       I    W+    +P++   +VVREFYAN+        +V G   S SRV                           
Subjt:  LLKRDFLFERGFSGDLPH--ILRTGIADHGWKLFCVKPESVNAQVVREFYANIA-----KEMVPG-DCSRSRV---------------------------

Query:  ------AAVEDREKTFQSAYLSREANTWMSFIRQRLLSTTHDSTVSREQVLLAFAILRSLSINV
              A  E R K+F+++ L+RE+  W+ +I  R+L TTH S VS+E+ +L +AI   ++I++
Subjt:  ------AAVEDREKTFQSAYLSREANTWMSFIRQRLLSTTHDSTVSREQVLLAFAILRSLSINV

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]1.1e-0428.21Show/hide
Query:  KAKREEREKKELRESSKIR---WLLKRDFLFERGFSGDLPHILRTGIADHGWKLFCVKPESVNAQVVREFYANIAKE----------MVP----------
        KA + E +  E+R    I+     ++++F+++     + P  +   I  H W+LFC  PE     +VREFY N+              VP          
Subjt:  KAKREEREKKELRESSKIR---WLLKRDFLFERGFSGDLPHILRTGIADHGWKLFCVKPESVNAQVVREFYANIAKE----------MVP----------

Query:  --GDCSRSRVAAVEDREK-------------------TFQSAY------LSREANTWMSFIRQRLLSTTHDSTVSREQVLLAFAILRSLSINVER
          GD        VED  K                   + Q AY      L+  A  W  F++ RLL TTH  TVS+E V L +++L   SINV R
Subjt:  --GDCSRSRVAAVEDREK-------------------TFQSAY------LSREANTWMSFIRQRLLSTTHDSTVSREQVLLAFAILRSLSINVER

TrEMBL top hitse value%identityAlignment
A0A061F2U9 Uncharacterized protein2.8e-0635.29Show/hide
Query:  IADHGWKLFCVKPESVNAQVVREFYANIAKEMVPGDC--SRSRVAAVEDREKTFQSAYLSREANTWMSFIRQRLLSTTHDSTVSREQVLLAFAILRSLSI
        I D  W  FC +P++    VVREFYAN+  E V G      ++     D   +F+ + + +E   W+ F+  RLLS+TH S V++++ +L +AI+   SI
Subjt:  IADHGWKLFCVKPESVNAQVVREFYANIAKEMVPGDC--SRSRVAAVEDREKTFQSAYLSREANTWMSFIRQRLLSTTHDSTVSREQVLLAFAILRSLSI

Query:  NV
        +V
Subjt:  NV

A0A2G9G7Z2 Uncharacterized protein4.7e-0629.27Show/hide
Query:  LLKRDFLFERGFSGDLPH--ILRTGIADHGWKLFCVKPESVNAQVVREFYANIA-----KEMVPG-DCSRSRV---------------------------
        +L+R F+ ERG     PH       I    W+    +P++   +VVREFYAN+        +V G   S SRV                           
Subjt:  LLKRDFLFERGFSGDLPH--ILRTGIADHGWKLFCVKPESVNAQVVREFYANIA-----KEMVPG-DCSRSRV---------------------------

Query:  ------AAVEDREKTFQSAYLSREANTWMSFIRQRLLSTTHDSTVSREQVLLAFAILRSLSINV
              A  E R K+F+++ L+RE+  W+ +I  R+L TTH S VS+E+ +L +AI   ++I++
Subjt:  ------AAVEDREKTFQSAYLSREANTWMSFIRQRLLSTTHDSTVSREQVLLAFAILRSLSINV

A0A2P5DAQ2 Uncharacterized protein5.2e-0528.21Show/hide
Query:  KAKREEREKKELRESSKIR---WLLKRDFLFERGFSGDLPHILRTGIADHGWKLFCVKPESVNAQVVREFYANIAKE----------MVP----------
        KA + E +  E+R    I+     ++++F+++     + P  +   I  H W+LFC  PE     +VREFY N+              VP          
Subjt:  KAKREEREKKELRESSKIR---WLLKRDFLFERGFSGDLPHILRTGIADHGWKLFCVKPESVNAQVVREFYANIAKE----------MVP----------

Query:  --GDCSRSRVAAVEDREK-------------------TFQSAY------LSREANTWMSFIRQRLLSTTHDSTVSREQVLLAFAILRSLSINVER
          GD        VED  K                   + Q AY      L+  A  W  F++ RLL TTH  TVS+E V L +++L   SINV R
Subjt:  --GDCSRSRVAAVEDREK-------------------TFQSAY------LSREANTWMSFIRQRLLSTTHDSTVSREQVLLAFAILRSLSINVER

A0A6A3B6J9 RT_RNaseH_2 domain-containing protein5.2e-0527.1Show/hide
Query:  ELRESSKIRWLLKRDFLFERGF------SGDLPHILRTGIADHGWKLFCVKPESVNAQVVREFYANIAKE-----MVPGDCSRSRVAAV-----------
        ++    + + +  R   FE GF        DL   +   +  H WK F   P +VNA +V+EFY+NI +      MV G   R    A+           
Subjt:  ELRESSKIRWLLKRDFLFERGF------SGDLPHILRTGIADHGWKLFCVKPESVNAQVVREFYANIAKE-----MVPGDCSRSRVAAV-----------

Query:  EDREKTFQSAYLSREANTWMSFIRQRLLSTTHDSTVSREQVLLAFAILRSLSINV
        + R +T     L      W  F++ +LL T+H++TVS ++++L  +I+  L+I++
Subjt:  EDREKTFQSAYLSREANTWMSFIRQRLLSTTHDSTVSREQVLLAFAILRSLSINV

W9SAV1 Uncharacterized protein5.2e-0528.1Show/hide
Query:  ERGF---SGDLPHILRTGIADHGWKLFCVKPESVNAQVVREFYANIAKEMVPGDC-SRSRVAAVEDREKTFQSAYLSREANTWMSFIRQRLLSTTHDSTV
        ERGF   +G+LP  +   I D GW+ FC +P +   Q  +       +E++   C   +R    ++ E  F++ YL+     W  F+  RL+ +TH S V
Subjt:  ERGF---SGDLPHILRTGIADHGWKLFCVKPESVNAQVVREFYANIAKEMVPGDC-SRSRVAAVEDREKTFQSAYLSREANTWMSFIRQRLLSTTHDSTV

Query:  SREQVLLAFAILRSLSINVERQALTFWNYVMTRDANLKKALQE-NFSKPYPAL
        ++++ L+  AI +   +NV              ++ +  AL++ N S PYP+L
Subjt:  SREQVLLAFAILRSLSINVERQALTFWNYVMTRDANLKKALQE-NFSKPYPAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACAGAACCCAGAGGAGGTTGAGCCGAGAATGGGGATACAGAGGAAGTTCAAGAAGAGGACATACCGAGGAAATTCAAGAGAAACAGAATGAGGATGTGCAGGCAGA
GGTTGCGACTGAAGAGGAGCCAGTTCAGGAGGCTCGTGTGAGGTCATCATGCCCGAACCTCCGAGACGTCGCCGCATTAAGCGGCATTCAGGTGATTCGGCCTGATACCC
CATCACCACCATCATCGAATTCTGAGAAAGAGAAGGCAAAGCGAGAGGAACGAGAGAAAAAAGAGCTGAGAGAAAGTAGCAAAATACGCTGGCTACTGAAAAGAGATTTT
TTATTTGAGAGAGGATTTAGCGGTGATCTTCCGCATATTCTGAGGACCGGTATTGCTGACCATGGCTGGAAGTTGTTTTGTGTGAAGCCTGAGTCTGTAAACGCGCAGGT
GGTGCGCGAATTTTATGCTAACATTGCAAAGGAGATGGTTCCAGGTGATTGTTCGAGGAGTCGAGTGGCAGCTGTCGAAGACAGAGAAAAGACATTCCAGTCAGCTTACT
TGAGTAGGGAAGCAAATACATGGATGAGTTTTATCAGACAACGATTGCTTTCAACGACTCATGACTCGACGGTCTCAAGGGAACAGGTTCTTCTAGCTTTTGCGATTTTG
CGGTCTCTCAGCATCAATGTGGAAAGGCAGGCTTTAACCTTCTGGAACTATGTTATGACTCGTGATGCCAATTTAAAGAAGGCGCTGCAAGAGAATTTTTCGAAACCGTA
TCCAGCCCTTCCTGCATTCCCTGAAGATCTGTTGAACCCCTGGATTCTGCCCCCACCTGTTGAACGAGAAGGAGATGATGATGAAGAGCAAGGTCATGAAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTACAGAACCCAGAGGAGGTTGAGCCGAGAATGGGGATACAGAGGAAGTTCAAGAAGAGGACATACCGAGGAAATTCAAGAGAAACAGAATGAGGATGTGCAGGCAGA
GGTTGCGACTGAAGAGGAGCCAGTTCAGGAGGCTCGTGTGAGGTCATCATGCCCGAACCTCCGAGACGTCGCCGCATTAAGCGGCATTCAGGTGATTCGGCCTGATACCC
CATCACCACCATCATCGAATTCTGAGAAAGAGAAGGCAAAGCGAGAGGAACGAGAGAAAAAAGAGCTGAGAGAAAGTAGCAAAATACGCTGGCTACTGAAAAGAGATTTT
TTATTTGAGAGAGGATTTAGCGGTGATCTTCCGCATATTCTGAGGACCGGTATTGCTGACCATGGCTGGAAGTTGTTTTGTGTGAAGCCTGAGTCTGTAAACGCGCAGGT
GGTGCGCGAATTTTATGCTAACATTGCAAAGGAGATGGTTCCAGGTGATTGTTCGAGGAGTCGAGTGGCAGCTGTCGAAGACAGAGAAAAGACATTCCAGTCAGCTTACT
TGAGTAGGGAAGCAAATACATGGATGAGTTTTATCAGACAACGATTGCTTTCAACGACTCATGACTCGACGGTCTCAAGGGAACAGGTTCTTCTAGCTTTTGCGATTTTG
CGGTCTCTCAGCATCAATGTGGAAAGGCAGGCTTTAACCTTCTGGAACTATGTTATGACTCGTGATGCCAATTTAAAGAAGGCGCTGCAAGAGAATTTTTCGAAACCGTA
TCCAGCCCTTCCTGCATTCCCTGAAGATCTGTTGAACCCCTGGATTCTGCCCCCACCTGTTGAACGAGAAGGAGATGATGATGAAGAGCAAGGTCATGAAGATTGA
Protein sequenceShow/hide protein sequence
MYRTQRRLSREWGYRGSSRRGHTEEIQEKQNEDVQAEVATEEEPVQEARVRSSCPNLRDVAALSGIQVIRPDTPSPPSSNSEKEKAKREEREKKELRESSKIRWLLKRDF
LFERGFSGDLPHILRTGIADHGWKLFCVKPESVNAQVVREFYANIAKEMVPGDCSRSRVAAVEDREKTFQSAYLSREANTWMSFIRQRLLSTTHDSTVSREQVLLAFAIL
RSLSINVERQALTFWNYVMTRDANLKKALQENFSKPYPALPAFPEDLLNPWILPPPVEREGDDDEEQGHED