; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0008673 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008673
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDUF4283 domain-containing protein
Genome locationchr9:27703450..27704148
RNA-Seq ExpressionLag0008673
SyntenyLag0008673
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041398.1 hypothetical protein E6C27_scaffold206G00440 [Cucumis melo var. makuwa]1.9e-2032.27Show/hide
Query:  MHGRINVVPSYGGWVRIRNLPMHLWNVRIFKAIGDCLRGFIKYVESNSPLIECIEVWIRVRNSYCGFIPGEVGIIDGD-HVFKMQVVTFQDGNMLIDRVA
        +H    V+PSYGGW R R +P+H+WN+  F  IG+   GFI     +   IE  E  I+V+ +Y GF+P  + I D + HVF +Q+VT  +G  L +R  
Subjt:  MHGRINVVPSYGGWVRIRNLPMHLWNVRIFKAIGDCLRGFIKYVESNSPLIECIEVWIRVRNSYCGFIPGEVGIIDGD-HVFKMQVVTFQDGNMLIDRVA

Query:  GIHGSFLPAAAHAFHRGPLDPEFNTVDKWRIEDGTFSPQVKAQKVIAENEKVGEPFNEKQRAVSENFELARQKGKMKVDENFGPTLAQKTSGRAIRKDRR
         IHGSF   AA  F+      EFN           ++ Q   ++ +A   K+    +E  +  S+     R+KG  K  + F  TL    S   +    +
Subjt:  GIHGSFLPAAAHAFHRGPLDPEFNTVDKWRIEDGTFSPQVKAQKVIAENEKVGEPFNEKQRAVSENFELARQKGKMKVDENFGPTLAQKTSGRAIRKDRR

Query:  RPTKSVPREKAQRLRQRTEE
        RPT S  ++K  R++ ++ E
Subjt:  RPTKSVPREKAQRLRQRTEE

KAA0044557.1 hypothetical protein E6C27_scaffold46G003060 [Cucumis melo var. makuwa]1.9e-2032.88Show/hide
Query:  HGRINVVPSYGGWVRIRNLPMHLWNVRIFKAIGDCLRGFIKYVESNSPLIECIEVWIRVRNSYCGFIPGEVGIIDGD-HVFKMQVVTFQDGNMLIDRVAG
        H    V+PSYGGW R R +P+H+WN+  F  IG+   GFI     +   IE  E  I+V+ +Y GF+P  + I D + HVF +Q VT  +G  L +R   
Subjt:  HGRINVVPSYGGWVRIRNLPMHLWNVRIFKAIGDCLRGFIKYVESNSPLIECIEVWIRVRNSYCGFIPGEVGIIDGD-HVFKMQVVTFQDGNMLIDRVAG

Query:  IHGSFLPAAAHAFHRGPLDPEFNTVDKWRIEDGTFSPQVKAQKVIAENEKVGEPFNEKQRAVSENFELARQKGKMKVDENFGPTLAQKTSGRAIRKDRRR
        IHGSF   AA  F+      EFN           ++ Q   ++ +A   K+  P  E  +  S+     R+KG  K  + F  TL    S   +    +R
Subjt:  IHGSFLPAAAHAFHRGPLDPEFNTVDKWRIEDGTFSPQVKAQKVIAENEKVGEPFNEKQRAVSENFELARQKGKMKVDENFGPTLAQKTSGRAIRKDRRR

Query:  PTKSVPREKAQRLRQRTEE
        PT S  ++K  R++ ++ E
Subjt:  PTKSVPREKAQRLRQRTEE

TYK01560.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]6.4e-2454.44Show/hide
Query:  MHGRINVVPSYGGWVRIRNLPMHLWNVRIFKAIGDCLRGFIKYVESNSPLIECIEVWIRVRNSYCGFIPGEVGIIDGDHVFKMQVVTFQD
        +HGR+  VPSYGGW+++RN P HLWN  IFK +GD LRGFI Y + NS LI+C+EV I+V+ +YCGF+P E  +ID    F +QV + Q+
Subjt:  MHGRINVVPSYGGWVRIRNLPMHLWNVRIFKAIGDCLRGFIKYVESNSPLIECIEVWIRVRNSYCGFIPGEVGIIDGDHVFKMQVVTFQD

TYK10355.1 hypothetical protein E5676_scaffold367G00330 [Cucumis melo var. makuwa]5.2e-1830.36Show/hide
Query:  HGRINVVPSYGGWVRIRNLPMHLWNVRIFKAIGDCLRGFIKYVESNSPLIECIEVWIRVRNSYCGFIPGEVGIID-GDHVFKMQVVTFQDGNMLIDRVAG
        H    V+PSYGGW+++R +P+H WN+  F  IGD   GFI+  +    L + IE  IR++++Y GFIP  + + D  +H F +QV+   +G   ++R   
Subjt:  HGRINVVPSYGGWVRIRNLPMHLWNVRIFKAIGDCLRGFIKYVESNSPLIECIEVWIRVRNSYCGFIPGEVGIID-GDHVFKMQVVTFQDGNMLIDRVAG

Query:  IHGSFLPAAAHAFHRGPLDPEFN-TVDKWRIEDG-TFSPQVKAQKVIAENEKVGE------PFNEKQRAVSE--NFE---LARQKGKMKVDENFGPTLAQ
        IHG+F   AA  F       EFN   +++  ED    SP+     VI + ++  +        N+K  A+ +  N++    + +K KM+ +++    ++Q
Subjt:  IHGSFLPAAAHAFHRGPLDPEFN-TVDKWRIEDG-TFSPQVKAQKVIAENEKVGE------PFNEKQRAVSE--NFE---LARQKGKMKVDENFGPTLAQ

Query:  KTSGRAIRKDRRRPTKSVPREKAQ
        K  G+   K     +KS+ + KA+
Subjt:  KTSGRAIRKDRRRPTKSVPREKAQ

XP_022149859.1 uncharacterized protein LOC111018186 [Momordica charantia]4.2e-3647.55Show/hide
Query:  MMHGRINVVPSYGGWVRIRNLPMHLWNVRIFKAIGDCLRGFIKYVESNSPLIECIEVWIRVRNSYCGFIPGEVGIIDGDHVFKMQVVTFQDGNMLIDRVA
        ++HGR  + PSYG WV+IRN+P+HLW++  FKAIG+ L GFI Y ++NS  IEC +V I+V+++YCGFIP E+  +DG   F+ +VV+F+D   L  +  
Subjt:  MMHGRINVVPSYGGWVRIRNLPMHLWNVRIFKAIGDCLRGFIKYVESNSPLIECIEVWIRVRNSYCGFIPGEVGIIDGDHVFKMQVVTFQDGNMLIDRVA

Query:  GIHGSFLPAAAHAFHRGPLDPEFNTVDKWRIEDGTFSPQVKAQ
        GIHG F   AA +FH+G  +   N++D+WR+E+G   P V  Q
Subjt:  GIHGSFLPAAAHAFHRGPLDPEFNTVDKWRIEDGTFSPQVKAQ

TrEMBL top hitse value%identityAlignment
A0A5A7TEP0 DUF4283 domain-containing protein9.3e-2132.27Show/hide
Query:  MHGRINVVPSYGGWVRIRNLPMHLWNVRIFKAIGDCLRGFIKYVESNSPLIECIEVWIRVRNSYCGFIPGEVGIIDGD-HVFKMQVVTFQDGNMLIDRVA
        +H    V+PSYGGW R R +P+H+WN+  F  IG+   GFI     +   IE  E  I+V+ +Y GF+P  + I D + HVF +Q+VT  +G  L +R  
Subjt:  MHGRINVVPSYGGWVRIRNLPMHLWNVRIFKAIGDCLRGFIKYVESNSPLIECIEVWIRVRNSYCGFIPGEVGIIDGD-HVFKMQVVTFQDGNMLIDRVA

Query:  GIHGSFLPAAAHAFHRGPLDPEFNTVDKWRIEDGTFSPQVKAQKVIAENEKVGEPFNEKQRAVSENFELARQKGKMKVDENFGPTLAQKTSGRAIRKDRR
         IHGSF   AA  F+      EFN           ++ Q   ++ +A   K+    +E  +  S+     R+KG  K  + F  TL    S   +    +
Subjt:  GIHGSFLPAAAHAFHRGPLDPEFNTVDKWRIEDGTFSPQVKAQKVIAENEKVGEPFNEKQRAVSENFELARQKGKMKVDENFGPTLAQKTSGRAIRKDRR

Query:  RPTKSVPREKAQRLRQRTEE
        RPT S  ++K  R++ ++ E
Subjt:  RPTKSVPREKAQRLRQRTEE

A0A5A7TRS9 DUF4283 domain-containing protein9.3e-2132.88Show/hide
Query:  HGRINVVPSYGGWVRIRNLPMHLWNVRIFKAIGDCLRGFIKYVESNSPLIECIEVWIRVRNSYCGFIPGEVGIIDGD-HVFKMQVVTFQDGNMLIDRVAG
        H    V+PSYGGW R R +P+H+WN+  F  IG+   GFI     +   IE  E  I+V+ +Y GF+P  + I D + HVF +Q VT  +G  L +R   
Subjt:  HGRINVVPSYGGWVRIRNLPMHLWNVRIFKAIGDCLRGFIKYVESNSPLIECIEVWIRVRNSYCGFIPGEVGIIDGD-HVFKMQVVTFQDGNMLIDRVAG

Query:  IHGSFLPAAAHAFHRGPLDPEFNTVDKWRIEDGTFSPQVKAQKVIAENEKVGEPFNEKQRAVSENFELARQKGKMKVDENFGPTLAQKTSGRAIRKDRRR
        IHGSF   AA  F+      EFN           ++ Q   ++ +A   K+  P  E  +  S+     R+KG  K  + F  TL    S   +    +R
Subjt:  IHGSFLPAAAHAFHRGPLDPEFNTVDKWRIEDGTFSPQVKAQKVIAENEKVGEPFNEKQRAVSENFELARQKGKMKVDENFGPTLAQKTSGRAIRKDRRR

Query:  PTKSVPREKAQRLRQRTEE
        PT S  ++K  R++ ++ E
Subjt:  PTKSVPREKAQRLRQRTEE

A0A5D3BR42 LINE-1 retrotransposable element ORF2 protein3.1e-2454.44Show/hide
Query:  MHGRINVVPSYGGWVRIRNLPMHLWNVRIFKAIGDCLRGFIKYVESNSPLIECIEVWIRVRNSYCGFIPGEVGIIDGDHVFKMQVVTFQD
        +HGR+  VPSYGGW+++RN P HLWN  IFK +GD LRGFI Y + NS LI+C+EV I+V+ +YCGF+P E  +ID    F +QV + Q+
Subjt:  MHGRINVVPSYGGWVRIRNLPMHLWNVRIFKAIGDCLRGFIKYVESNSPLIECIEVWIRVRNSYCGFIPGEVGIIDGDHVFKMQVVTFQD

A0A5D3CFS8 DUF4283 domain-containing protein2.5e-1830.36Show/hide
Query:  HGRINVVPSYGGWVRIRNLPMHLWNVRIFKAIGDCLRGFIKYVESNSPLIECIEVWIRVRNSYCGFIPGEVGIID-GDHVFKMQVVTFQDGNMLIDRVAG
        H    V+PSYGGW+++R +P+H WN+  F  IGD   GFI+  +    L + IE  IR++++Y GFIP  + + D  +H F +QV+   +G   ++R   
Subjt:  HGRINVVPSYGGWVRIRNLPMHLWNVRIFKAIGDCLRGFIKYVESNSPLIECIEVWIRVRNSYCGFIPGEVGIID-GDHVFKMQVVTFQDGNMLIDRVAG

Query:  IHGSFLPAAAHAFHRGPLDPEFN-TVDKWRIEDG-TFSPQVKAQKVIAENEKVGE------PFNEKQRAVSE--NFE---LARQKGKMKVDENFGPTLAQ
        IHG+F   AA  F       EFN   +++  ED    SP+     VI + ++  +        N+K  A+ +  N++    + +K KM+ +++    ++Q
Subjt:  IHGSFLPAAAHAFHRGPLDPEFN-TVDKWRIEDG-TFSPQVKAQKVIAENEKVGE------PFNEKQRAVSE--NFE---LARQKGKMKVDENFGPTLAQ

Query:  KTSGRAIRKDRRRPTKSVPREKAQ
        K  G+   K     +KS+ + KA+
Subjt:  KTSGRAIRKDRRRPTKSVPREKAQ

A0A6J1D6X4 uncharacterized protein LOC1110181862.1e-3647.55Show/hide
Query:  MMHGRINVVPSYGGWVRIRNLPMHLWNVRIFKAIGDCLRGFIKYVESNSPLIECIEVWIRVRNSYCGFIPGEVGIIDGDHVFKMQVVTFQDGNMLIDRVA
        ++HGR  + PSYG WV+IRN+P+HLW++  FKAIG+ L GFI Y ++NS  IEC +V I+V+++YCGFIP E+  +DG   F+ +VV+F+D   L  +  
Subjt:  MMHGRINVVPSYGGWVRIRNLPMHLWNVRIFKAIGDCLRGFIKYVESNSPLIECIEVWIRVRNSYCGFIPGEVGIIDGDHVFKMQVVTFQDGNMLIDRVA

Query:  GIHGSFLPAAAHAFHRGPLDPEFNTVDKWRIEDGTFSPQVKAQ
        GIHG F   AA +FH+G  +   N++D+WR+E+G   P V  Q
Subjt:  GIHGSFLPAAAHAFHRGPLDPEFNTVDKWRIEDGTFSPQVKAQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCACGGTAGAATCAATGTGGTGCCTAGTTATGGTGGATGGGTGAGAATCAGAAACCTCCCGATGCATTTATGGAACGTAAGAATATTTAAAGCTATAGGA
GATTGTCTGAGGGGGTTCATTAAATATGTTGAATCTAACTCTCCCCTCATTGAATGCATTGAGGTTTGGATAAGAGTTAGAAACAGTTATTGTGGATTCATTCCA
GGTGAAGTTGGAATTATTGATGGGGATCACGTCTTTAAAATGCAGGTCGTCACGTTTCAGGATGGAAATATGTTAATTGACCGTGTCGCCGGAATCCATGGAAGC
TTCTTGCCGGCGGCAGCCCATGCTTTCCACAGAGGCCCGTTGGATCCTGAGTTTAACACAGTGGACAAATGGAGAATTGAAGATGGTACCTTTTCTCCACAGGTC
AAAGCCCAAAAGGTCATTGCAGAAAACGAGAAAGTAGGAGAGCCATTTAATGAAAAACAGAGGGCAGTCAGTGAAAATTTTGAATTAGCCCGCCAAAAAGGAAAA
ATGAAGGTGGATGAGAATTTTGGGCCTACCCTAGCCCAAAAAACAAGTGGGAGGGCCATAAGAAAAGACAGAAGAAGGCCCACGAAGTCAGTCCCACGAGAGAAA
GCCCAAAGGCTAAGACAAAGAACCGAAGAGAAGTATCTTTTGCCAAAGAAACCCAAGTTACCGTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGCACGGTAGAATCAATGTGGTGCCTAGTTATGGTGGATGGGTGAGAATCAGAAACCTCCCGATGCATTTATGGAACGTAAGAATATTTAAAGCTATAGGA
GATTGTCTGAGGGGGTTCATTAAATATGTTGAATCTAACTCTCCCCTCATTGAATGCATTGAGGTTTGGATAAGAGTTAGAAACAGTTATTGTGGATTCATTCCA
GGTGAAGTTGGAATTATTGATGGGGATCACGTCTTTAAAATGCAGGTCGTCACGTTTCAGGATGGAAATATGTTAATTGACCGTGTCGCCGGAATCCATGGAAGC
TTCTTGCCGGCGGCAGCCCATGCTTTCCACAGAGGCCCGTTGGATCCTGAGTTTAACACAGTGGACAAATGGAGAATTGAAGATGGTACCTTTTCTCCACAGGTC
AAAGCCCAAAAGGTCATTGCAGAAAACGAGAAAGTAGGAGAGCCATTTAATGAAAAACAGAGGGCAGTCAGTGAAAATTTTGAATTAGCCCGCCAAAAAGGAAAA
ATGAAGGTGGATGAGAATTTTGGGCCTACCCTAGCCCAAAAAACAAGTGGGAGGGCCATAAGAAAAGACAGAAGAAGGCCCACGAAGTCAGTCCCACGAGAGAAA
GCCCAAAGGCTAAGACAAAGAACCGAAGAGAAGTATCTTTTGCCAAAGAAACCCAAGTTACCGTGTTGA
Protein sequenceShow/hide protein sequence
MMHGRINVVPSYGGWVRIRNLPMHLWNVRIFKAIGDCLRGFIKYVESNSPLIECIEVWIRVRNSYCGFIPGEVGIIDGDHVFKMQVVTFQDGNMLIDRVAGIHGS
FLPAAAHAFHRGPLDPEFNTVDKWRIEDGTFSPQVKAQKVIAENEKVGEPFNEKQRAVSENFELARQKGKMKVDENFGPTLAQKTSGRAIRKDRRRPTKSVPREK
AQRLRQRTEEKYLLPKKPKLPC