; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0008679 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008679
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 3-like
Genome locationchr9:27759490..27760104
RNA-Seq ExpressionLag0008679
SyntenyLag0008679
Gene Ontology termsGO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR008906 - HAT, C-terminal dimerisation domain
IPR012337 - Ribonuclease H-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK23433.1 putative transposase [Cucumis melo var. makuwa]2.4e-3549Show/hide
Query:  MTDKVEQILRQLFHAYSSYSFGNHGSGNGIGSGGSVPSGSGIGSSCSGSVITKEKGGAQTMDVDDESETYG-------FARSFSSVETTTFD-GESDIDV
        M + VEQ  R+LFH YS                 +  SGS  G S + +  T+   G       D +E  G           F    TT F+ G S+ID+
Subjt:  MTDKVEQILRQLFHAYSSYSFGNHGSGNGIGSGGSVPSGSGIGSSCSGSVITKEKGGAQTMDVDDESETYG-------FARSFSSVETTTFD-GESDIDV

Query:  YLLETLAKDDSSFDILNWWKHNSHRFEILSAISRDLLEIPVSTVASESAFSTGGRVVDSFRSSLAPKTVEALICTQNWLNSNPIDIEFFKLLEEDSTLEE
        YLLE   + +  FDIL WWK NS RFE+L  ++RD+L IPVSTVASESAFSTGGRVVDS R SLAPKTVEALICTQNWLNS+PI ++F   LEE S  EE
Subjt:  YLLETLAKDDSSFDILNWWKHNSHRFEILSAISRDLLEIPVSTVASESAFSTGGRVVDSFRSSLAPKTVEALICTQNWLNSNPIDIEFFKLLEEDSTLEE

XP_016903504.1 PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo]4.9e-3649.5Show/hide
Query:  VEQILRQLFHAYSSYSFGNHGSGNGIGSGGSVPSGSGIGSSCSGSVITKEKGGAQTMDVD--------DESET-----YGFARSFSSVETTTFDGESDID
        VE +LR+LFH Y      N G  +G  +  S    + I +S S      E      MD+D        D+ ET     YG   SF  VETTT D ES+ID
Subjt:  VEQILRQLFHAYSSYSFGNHGSGNGIGSGGSVPSGSGIGSSCSGSVITKEKGGAQTMDVD--------DESET-----YGFARSFSSVETTTFDGESDID

Query:  VYLLETLAKDDSSFDILNWWKHNSHRFEILSAISRDLLEIPVSTVASESAFSTGGRVVDSFRSSLAPKTVEALICTQNWLNSNPIDIEFFKL-LEEDSTL
        VYLL++L   DS+FDIL WWK N +RFE+LS ISRD+L IPVST++SES F+ GG VV+S R S+APK +EALICT+NWLNS+PI++E     LEED   
Subjt:  VYLLETLAKDDSSFDILNWWKHNSHRFEILSAISRDLLEIPVSTVASESAFSTGGRVVDSFRSSLAPKTVEALICTQNWLNSNPIDIEFFKL-LEEDSTL

Query:  EE
        EE
Subjt:  EE

XP_031739490.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis sativus]1.3e-3652.26Show/hide
Query:  VEQILRQLFHAYSSYSFGNHGSGNGIGSGGSVPSGSGIGSSC--SGSVITKEKGGAQT---MDVDDESET-----YGFARSFSSVETTTFDGESDIDVYL
        VE  LR+LFH    Y+ G   S     S     S S   S+C  +  + + +     T   +DV DE ET     YG   SF  VETTT D ES+IDVYL
Subjt:  VEQILRQLFHAYSSYSFGNHGSGNGIGSGGSVPSGSGIGSSC--SGSVITKEKGGAQT---MDVDDESET-----YGFARSFSSVETTTFDGESDIDVYL

Query:  LETLAKDDSSFDILNWWKHNSHRFEILSAISRDLLEIPVSTVASESAFSTGGRVVDSFRSSLAPKTVEALICTQNWLNSNPIDIEFFKL-LEEDSTLEE
        LE+LA  DS FDIL+WWK N HRFE+LS ISRD+L IPVSTV+SES F+ GG VV+S R S+APK +EALICT NWLN+NPI++E     LEED   EE
Subjt:  LETLAKDDSSFDILNWWKHNSHRFEILSAISRDLLEIPVSTVASESAFSTGGRVVDSFRSSLAPKTVEALICTQNWLNSNPIDIEFFKL-LEEDSTLEE

XP_038888298.1 zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 [Benincasa hispida]5.2e-3850Show/hide
Query:  VEQILRQLFHAYSSYSFGNHGSGNGIGSGGSVPSG-SGIGSSCS--------GSVITKEKGGAQTMDVDDESET---------YGFARSFSSVETTTFDG
        VE +LR+LFH Y+     +  + +      SV  G S   S+C         G            +DVD + E          YG   SF   ETTTFD 
Subjt:  VEQILRQLFHAYSSYSFGNHGSGNGIGSGGSVPSG-SGIGSSCS--------GSVITKEKGGAQTMDVDDESET---------YGFARSFSSVETTTFDG

Query:  ESDIDVYLLETLAKDDSSFDILNWWKHNSHRFEILSAISRDLLEIPVSTVASESAFSTGGRVVDSFRSSLAPKTVEALICTQNWLNSNPIDIEFFKL-LE
        ES+IDVYLLE+L   DS+FDIL WWK N HRFE+LS ISRD+L IPVSTVAS+SAFS GGRVV+S R SLAP+ VEALICTQNWLNS+PI++E     LE
Subjt:  ESDIDVYLLETLAKDDSSFDILNWWKHNSHRFEILSAISRDLLEIPVSTVASESAFSTGGRVVDSFRSSLAPKTVEALICTQNWLNSNPIDIEFFKL-LE

Query:  EDSTLEEDNVFTLF
        ED   EE   F L+
Subjt:  EDSTLEEDNVFTLF

XP_038888299.1 zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X2 [Benincasa hispida]1.2e-3750.72Show/hide
Query:  VEQILRQLFHAYSSYSFGNHGSGNGIGSGGSVPSG-SGIGSSCS--------GSVITKEKGGAQTMDVDDESET---------YGFARSFSSVETTTFDG
        VE +LR+LFH Y+     +  + +      SV  G S   S+C         G            +DVD + E          YG   SF   ETTTFD 
Subjt:  VEQILRQLFHAYSSYSFGNHGSGNGIGSGGSVPSG-SGIGSSCS--------GSVITKEKGGAQTMDVDDESET---------YGFARSFSSVETTTFDG

Query:  ESDIDVYLLETLAKDDSSFDILNWWKHNSHRFEILSAISRDLLEIPVSTVASESAFSTGGRVVDSFRSSLAPKTVEALICTQNWLNSNPIDIEFFKL-LE
        ES+IDVYLLE+L   DS+FDIL WWK N HRFE+LS ISRD+L IPVSTVAS+SAFS GGRVV+S R SLAP+ VEALICTQNWLNS+PI++E     LE
Subjt:  ESDIDVYLLETLAKDDSSFDILNWWKHNSHRFEILSAISRDLLEIPVSTVASESAFSTGGRVVDSFRSSLAPKTVEALICTQNWLNSNPIDIEFFKL-LE

Query:  EDSTLEE
        ED   EE
Subjt:  EDSTLEE

TrEMBL top hitse value%identityAlignment
A0A1S4E5K1 zinc finger BED domain-containing protein RICESLEEPER 2-like2.4e-3649.5Show/hide
Query:  VEQILRQLFHAYSSYSFGNHGSGNGIGSGGSVPSGSGIGSSCSGSVITKEKGGAQTMDVD--------DESET-----YGFARSFSSVETTTFDGESDID
        VE +LR+LFH Y      N G  +G  +  S    + I +S S      E      MD+D        D+ ET     YG   SF  VETTT D ES+ID
Subjt:  VEQILRQLFHAYSSYSFGNHGSGNGIGSGGSVPSGSGIGSSCSGSVITKEKGGAQTMDVD--------DESET-----YGFARSFSSVETTTFDGESDID

Query:  VYLLETLAKDDSSFDILNWWKHNSHRFEILSAISRDLLEIPVSTVASESAFSTGGRVVDSFRSSLAPKTVEALICTQNWLNSNPIDIEFFKL-LEEDSTL
        VYLL++L   DS+FDIL WWK N +RFE+LS ISRD+L IPVST++SES F+ GG VV+S R S+APK +EALICT+NWLNS+PI++E     LEED   
Subjt:  VYLLETLAKDDSSFDILNWWKHNSHRFEILSAISRDLLEIPVSTVASESAFSTGGRVVDSFRSSLAPKTVEALICTQNWLNSNPIDIEFFKL-LEEDSTL

Query:  EE
        EE
Subjt:  EE

A0A5A7UR54 Transposase2.6e-3548.5Show/hide
Query:  MTDKVEQILRQLFHAYSSYSFGNHGSGNGIGSGGSVPSGSGIGSSCSGSVITKEKGGAQTMDVDDESETYG-------FARSFSSVETTTFD-GESDIDV
        M + VEQ  R+LFH YS                 +  SGS  G S + +  T+   G       D +E  G           F    TT F+ G S+ID+
Subjt:  MTDKVEQILRQLFHAYSSYSFGNHGSGNGIGSGGSVPSGSGIGSSCSGSVITKEKGGAQTMDVDDESETYG-------FARSFSSVETTTFD-GESDIDV

Query:  YLLETLAKDDSSFDILNWWKHNSHRFEILSAISRDLLEIPVSTVASESAFSTGGRVVDSFRSSLAPKTVEALICTQNWLNSNPIDIEFFKLLEEDSTLEE
        YLLE   + +  FDIL WWK NS RFE+L  ++RD+L IPVSTVASESAFSTGGRVVDS R SLAPKT+EALICTQNWLNS+PI ++F   LEE S  EE
Subjt:  YLLETLAKDDSSFDILNWWKHNSHRFEILSAISRDLLEIPVSTVASESAFSTGGRVVDSFRSSLAPKTVEALICTQNWLNSNPIDIEFFKLLEEDSTLEE

A0A5D3CXI1 Zinc finger BED domain-containing protein RICESLEEPER 3-like1.2e-3549Show/hide
Query:  MTDKVEQILRQLFHAYSSYSFGNHGSGNGIGSGGSVPSGSGIGSSCSGSVITKEKGGAQTMDVDDESETYG-------FARSFSSVETTTFD-GESDIDV
        M + VEQ  R+LFH YS                 +  SGS  G S + +  T+   G       D +E  G           F    TT F+ G S+ID+
Subjt:  MTDKVEQILRQLFHAYSSYSFGNHGSGNGIGSGGSVPSGSGIGSSCSGSVITKEKGGAQTMDVDDESETYG-------FARSFSSVETTTFD-GESDIDV

Query:  YLLETLAKDDSSFDILNWWKHNSHRFEILSAISRDLLEIPVSTVASESAFSTGGRVVDSFRSSLAPKTVEALICTQNWLNSNPIDIEFFKLLEEDSTLEE
        YLLE   + +  FDIL WWK NS RFE+L  ++RD+L IPVSTVASESAFSTGGRVVDS R SLAPKTVEALICTQNWLNS+PI ++F   LEE S  EE
Subjt:  YLLETLAKDDSSFDILNWWKHNSHRFEILSAISRDLLEIPVSTVASESAFSTGGRVVDSFRSSLAPKTVEALICTQNWLNSNPIDIEFFKLLEEDSTLEE

A0A5D3DAN8 Zinc finger BED domain-containing protein RICESLEEPER 3-like1.2e-3549Show/hide
Query:  MTDKVEQILRQLFHAYSSYSFGNHGSGNGIGSGGSVPSGSGIGSSCSGSVITKEKGGAQTMDVDDESETYG-------FARSFSSVETTTFD-GESDIDV
        M + VEQ  R+LFH YS                 +  SGS  G S + +  T+   G       D +E  G           F    TT F+ G S+ID+
Subjt:  MTDKVEQILRQLFHAYSSYSFGNHGSGNGIGSGGSVPSGSGIGSSCSGSVITKEKGGAQTMDVDDESETYG-------FARSFSSVETTTFD-GESDIDV

Query:  YLLETLAKDDSSFDILNWWKHNSHRFEILSAISRDLLEIPVSTVASESAFSTGGRVVDSFRSSLAPKTVEALICTQNWLNSNPIDIEFFKLLEEDSTLEE
        YLLE   + +  FDIL WWK NS RFE+L  ++RD+L IPVSTVASESAFSTGGRVVDS R SLAPKTVEALICTQNWLNS+PI ++F   LEE S  EE
Subjt:  YLLETLAKDDSSFDILNWWKHNSHRFEILSAISRDLLEIPVSTVASESAFSTGGRVVDSFRSSLAPKTVEALICTQNWLNSNPIDIEFFKLLEEDSTLEE

A0A5D3DIL8 Putative transposase1.2e-3549Show/hide
Query:  MTDKVEQILRQLFHAYSSYSFGNHGSGNGIGSGGSVPSGSGIGSSCSGSVITKEKGGAQTMDVDDESETYG-------FARSFSSVETTTFD-GESDIDV
        M + VEQ  R+LFH YS                 +  SGS  G S + +  T+   G       D +E  G           F    TT F+ G S+ID+
Subjt:  MTDKVEQILRQLFHAYSSYSFGNHGSGNGIGSGGSVPSGSGIGSSCSGSVITKEKGGAQTMDVDDESETYG-------FARSFSSVETTTFD-GESDIDV

Query:  YLLETLAKDDSSFDILNWWKHNSHRFEILSAISRDLLEIPVSTVASESAFSTGGRVVDSFRSSLAPKTVEALICTQNWLNSNPIDIEFFKLLEEDSTLEE
        YLLE   + +  FDIL WWK NS RFE+L  ++RD+L IPVSTVASESAFSTGGRVVDS R SLAPKTVEALICTQNWLNS+PI ++F   LEE S  EE
Subjt:  YLLETLAKDDSSFDILNWWKHNSHRFEILSAISRDLLEIPVSTVASESAFSTGGRVVDSFRSSLAPKTVEALICTQNWLNSNPIDIEFFKLLEEDSTLEE

SwissProt top hitse value%identityAlignment
B9FJG3 Zinc finger BED domain-containing protein RICESLEEPER 13.8e-1546.74Show/hide
Query:  ESDIDVYLLETLAKDDSSFDILNWWKHNSHRFEILSAISRDLLEIPVSTVAS-ESAFS--TGGRVVDSFRSSLAPKTVEALICTQNWLNSNP
        +S+++ YL E+L      FDILNWWK N+ ++  LS ++RD+L IP+S V+S  S FS  TG R++D +RSS  P+ VEAL+C ++WL   P
Subjt:  ESDIDVYLLETLAKDDSSFDILNWWKHNSHRFEILSAISRDLLEIPVSTVAS-ESAFS--TGGRVVDSFRSSLAPKTVEALICTQNWLNSNP

P03010 Putative AC9 transposase4.3e-1942.96Show/hide
Query:  SSCSGSVITKEKGGAQTMD------VDDESETY-GFARSFSSVETTTFDGESDIDVYLLETLAKDDSSFDILNWWKHNSHRFEILSAISRDLLEIPVSTV
        SSCS S    +     +MD       DDE + Y    + +  VE+      +++D Y+ E L K    FDIL+WW+     + IL+ I+RD+L I VSTV
Subjt:  SSCSGSVITKEKGGAQTMD------VDDESETY-GFARSFSSVETTTFDGESDIDVYLLETLAKDDSSFDILNWWKHNSHRFEILSAISRDLLEIPVSTV

Query:  ASESAFSTGGRVVDSFRSSLAPKTVEALICTQNWL
        ASESAFS GGRVVD +R+ L  + VEALICT++W+
Subjt:  ASESAFSTGGRVVDSFRSSLAPKTVEALICTQNWL

P08770 Putative AC transposase4.3e-1939.74Show/hide
Query:  SSCSGSVITKEKGGAQTMD------VDDESETY-GFARSFSSVETTTFDGESDIDVYLLETLAKDDSSFDILNWWKHNSHRFEILSAISRDLLEIPVSTV
        SSCS S    +     +MD       DDE + Y    + +  VE+      +++D Y+ E L K    FDIL+WW+     + IL+ I+RD+L I VSTV
Subjt:  SSCSGSVITKEKGGAQTMD------VDDESETY-GFARSFSSVETTTFDGESDIDVYLLETLAKDDSSFDILNWWKHNSHRFEILSAISRDLLEIPVSTV

Query:  ASESAFSTGGRVVDSFRSSLAPKTVEALICTQNWLNSNPIDIEFFKLLEED
        ASESAFS GGRVVD +R+ L  + VEALICT++W+ ++     +F  +  D
Subjt:  ASESAFSTGGRVVDSFRSSLAPKTVEALICTQNWLNSNPIDIEFFKLLEED

Q75HY5 Zinc finger BED domain-containing protein RICESLEEPER 32.2e-1544.79Show/hide
Query:  SDIDVYLLETLAKDDSSFDILNWWKHNSHRFEILSAISRDLLEIPVSTVASE----SAFSTGGRVVDSFRSSLAPKTVEALICTQNWLNSNPIDIE
        S+++ YL E L      F+IL WWK N+ +F  LS ++RD+L IP+S V+S     SA +TG +++D +RSSL P+TVEAL C ++WL   P   E
Subjt:  SDIDVYLLETLAKDDSSFDILNWWKHNSHRFEILSAISRDLLEIPVSTVASE----SAFSTGGRVVDSFRSSLAPKTVEALICTQNWLNSNPIDIE

Q9M2N5 Zinc finger BED domain-containing protein DAYSLEEPER1.5e-1645.16Show/hide
Query:  VETTTFDGESDIDVYLLETLAKDDSSFDILNWWKHNSHRFEILSAISRDLLEIPVSTVASESAFSTGGRVVDSFRSSLAPKTVEALICTQNWL
        +ETT  + +S++D YL ETL      FD+L+WWK N  ++  LS ++RD+L IPVS  A +  F    R +D +++SL P+TVEALIC + WL
Subjt:  VETTTFDGESDIDVYLLETLAKDDSSFDILNWWKHNSHRFEILSAISRDLLEIPVSTVASESAFSTGGRVVDSFRSSLAPKTVEALICTQNWL

Arabidopsis top hitse value%identityAlignment
AT1G18560.1 BED zinc finger ;hAT family dimerisation domain4.6e-0824.67Show/hide
Query:  GAQTMDVDDESETYGFARSFS------SVETTTFDGESDIDVYLLETLAKDDSSFDILNWWKHNSHRFEILSAISRDLLEIPVSTVASESAFSTGGRVVD
        G +  +VD+      FA   +      S+     D   ++  YL E++    +  D+L+WWK NS R+  LS ++RD L +  ++ A E  F   G  +D
Subjt:  GAQTMDVDDESETYGFARSFS------SVETTTFDGESDIDVYLLETLAKDDSSFDILNWWKHNSHRFEILSAISRDLLEIPVSTVASESAFSTGGRVVD

Query:  SFRSSLAPKTVEALICTQNWLNSNP------IDIEFFKLLEEDSTLEEDN
          +  +   + +++IC ++W+ +         +I++ +L+E  +T+  DN
Subjt:  SFRSSLAPKTVEALICTQNWLNSNP------IDIEFFKLLEEDSTLEEDN

AT3G42170.1 BED zinc finger ;hAT family dimerisation domain1.1e-1745.16Show/hide
Query:  VETTTFDGESDIDVYLLETLAKDDSSFDILNWWKHNSHRFEILSAISRDLLEIPVSTVASESAFSTGGRVVDSFRSSLAPKTVEALICTQNWL
        +ETT  + +S++D YL ETL      FD+L+WWK N  ++  LS ++RD+L IPVS  A +  F    R +D +++SL P+TVEALIC + WL
Subjt:  VETTTFDGESDIDVYLLETLAKDDSSFDILNWWKHNSHRFEILSAISRDLLEIPVSTVASESAFSTGGRVVDSFRSSLAPKTVEALICTQNWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGATAAGGTAGAACAAATTTTGAGACAACTCTTCCATGCATATAGTTCATATTCTTTTGGCAATCATGGTAGTGGCAATGGCATTGGCAGTGGTGGTAGTGTGCC
TAGTGGCAGTGGCATTGGCAGTAGTTGTAGTGGCAGTGTCATTACTAAAGAAAAAGGTGGGGCTCAAACAATGGATGTTGATGATGAGAGTGAGACATATGGATTTGCAC
GTTCATTCTCAAGTGTTGAGACTACTACCTTCGATGGAGAGTCAGACATTGATGTGTATTTATTAGAAACTCTTGCTAAGGATGATAGTAGTTTTGACATTCTTAATTGG
TGGAAGCATAATAGTCATCGGTTCGAGATTCTTAGTGCAATAAGTAGAGATCTTTTGGAAATTCCAGTTTCGACTGTAGCATCTGAGTCTGCTTTTAGCACTGGAGGACG
TGTAGTTGATTCCTTTCGTTCTTCATTAGCTCCAAAAACAGTTGAGGCTCTTATATGCACTCAAAATTGGCTCAATTCCAACCCAATAGATATTGAGTTTTTCAAACTAC
TCGAGGAAGACTCAACTCTGGAAGAAGATAATGTTTTTACTTTGTTTTCTTCTTTGCTTGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGACAGATAAGGTAGAACAAATTTTGAGACAACTCTTCCATGCATATAGTTCATATTCTTTTGGCAATCATGGTAGTGGCAATGGCATTGGCAGTGGTGGTAGTGTGCC
TAGTGGCAGTGGCATTGGCAGTAGTTGTAGTGGCAGTGTCATTACTAAAGAAAAAGGTGGGGCTCAAACAATGGATGTTGATGATGAGAGTGAGACATATGGATTTGCAC
GTTCATTCTCAAGTGTTGAGACTACTACCTTCGATGGAGAGTCAGACATTGATGTGTATTTATTAGAAACTCTTGCTAAGGATGATAGTAGTTTTGACATTCTTAATTGG
TGGAAGCATAATAGTCATCGGTTCGAGATTCTTAGTGCAATAAGTAGAGATCTTTTGGAAATTCCAGTTTCGACTGTAGCATCTGAGTCTGCTTTTAGCACTGGAGGACG
TGTAGTTGATTCCTTTCGTTCTTCATTAGCTCCAAAAACAGTTGAGGCTCTTATATGCACTCAAAATTGGCTCAATTCCAACCCAATAGATATTGAGTTTTTCAAACTAC
TCGAGGAAGACTCAACTCTGGAAGAAGATAATGTTTTTACTTTGTTTTCTTCTTTGCTTGATTAA
Protein sequenceShow/hide protein sequence
MTDKVEQILRQLFHAYSSYSFGNHGSGNGIGSGGSVPSGSGIGSSCSGSVITKEKGGAQTMDVDDESETYGFARSFSSVETTTFDGESDIDVYLLETLAKDDSSFDILNW
WKHNSHRFEILSAISRDLLEIPVSTVASESAFSTGGRVVDSFRSSLAPKTVEALICTQNWLNSNPIDIEFFKLLEEDSTLEEDNVFTLFSSLLD