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Lag0008686 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008686
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr9:27940873..27942019
RNA-Seq ExpressionLag0008686
SyntenyLag0008686
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]3.6e-2641.09Show/hide
Query:  QTRVMRQGPWLFDKFFLMLSKPILMVKLTAMEFQFATFWVHFCKLPMDLYNKSMVERLGNAIGQFQEYDNGDCGYGWKESLCVRVTLDITRPLRLGIKVR
        + R++R GPW FD+  +++  P+ + K   M+F+  + WVHF  L +   NK+M  RLGNAIG F++ ++    + W   L VRV  D+ +PL  GIK+ 
Subjt:  QTRVMRQGPWLFDKFFLMLSKPILMVKLTAMEFQFATFWVHFCKLPMDLYNKSMVERLGNAIGQFQEYDNGDCGYGWKESLCVRVTLDITRPLRLGIKVR

Query:  LDEPLGNVWTPIRYEKLPEIYAYCGRIGH
        LD P+G  W PI+YE+LP+   +CGR+ H
Subjt:  LDEPLGNVWTPIRYEKLPEIYAYCGRIGH

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]1.1e-3039.8Show/hide
Query:  RVMRQGPWLFDKFFLMLSKPILMVKLTAMEFQFATFWVHFCKLPMDLYNKSMVERLGNAIGQFQEYDNGDCGYGWKESLCVRVTLDITRPLRLGIKVRLD
        RVM+ GPW FDK  ++L KP     ++ +EF    FW+H   LPM   NK+M  RLGNAIG F + D  + G+ W  SL +RV +DIT+PLR GIK+ +D
Subjt:  RVMRQGPWLFDKFFLMLSKPILMVKLTAMEFQFATFWVHFCKLPMDLYNKSMVERLGNAIGQFQEYDNGDCGYGWKESLCVRVTLDITRPLRLGIKVRLD

Query:  EPLGNVWTPIRYEKLPEIYAYCGRIGHGTPVPLIGRARKNNVDSVSTDVPENYKKRVGD--GLEGGSLKRARADEDE-HSNSIEPTVEAVEQPRQE
         P+G  W PI+YE+LP+   +CG IGH +      R      DS +T     + + VG   G + G   ++ A ED   S+S+      VE+ +Q+
Subjt:  EPLGNVWTPIRYEKLPEIYAYCGRIGHGTPVPLIGRARKNNVDSVSTDVPENYKKRVGD--GLEGGSLKRARADEDE-HSNSIEPTVEAVEQPRQE

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]2.0e-2440.8Show/hide
Query:  QTRVMRQGPWLFDKFFLMLSKPILMVKLTAMEFQFATFWVHFCKLPMDLYNKSMVERLGNAIGQFQEYDNGDCGYGWKESLCVRVTLDITRPLRLGIKVR
        + ++ + GPW FD+  ++++KP+ ++  + ++F     WV F  LP+    + M  RLGNA+G F+E D  D    W  +L VRV LDI++PLR GIK+ 
Subjt:  QTRVMRQGPWLFDKFFLMLSKPILMVKLTAMEFQFATFWVHFCKLPMDLYNKSMVERLGNAIGQFQEYDNGDCGYGWKESLCVRVTLDITRPLRLGIKVR

Query:  LDEPLGNVWTPIRYEKLPEIYAYCG
        LD P+G  W PI+YE+LP+   +CG
Subjt:  LDEPLGNVWTPIRYEKLPEIYAYCG

XP_028071384.1 uncharacterized protein LOC114273772 [Camellia sinensis]2.4e-2240.16Show/hide
Query:  RVMRQGPWLFDKFFLMLSKPILMVKLTAMEFQFATFWVHFCKLPMDLYNKSMVERLGNAIGQFQEYDNGDCGYGWKESLCVRVTLDITRPLRLGIKVRLD
        R++  GPW FDK  LML +    V+ + ++  +  FWVH C LP+ L NK + + +GNA+GQF + D  D G  W  ++ +RV LD+ +PLR G+K+ L 
Subjt:  RVMRQGPWLFDKFFLMLSKPILMVKLTAMEFQFATFWVHFCKLPMDLYNKSMVERLGNAIGQFQEYDNGDCGYGWKESLCVRVTLDITRPLRLGIKVRLD

Query:  EPLGNVWTPIRYEKLPEIYAYCGRIGH
          +  +W   +YE+LP    +CGR+GH
Subjt:  EPLGNVWTPIRYEKLPEIYAYCGRIGH

XP_028122006.1 uncharacterized protein LOC114319195 [Camellia sinensis]1.2e-2142.64Show/hide
Query:  RVMRQGPWLFDKFFLMLSKPILMVKLTAMEFQFATFWVHFCKLPMDLYNKSMVERLGNAIGQFQEYDNGDCGYGWKESLCVRVTLDITRPLRLGIKVRLD
        RV+  GPW FDK  LML +    V+ + ++     FWVH C LP+ L NK + E +GNA+GQF + D  D G  W  ++ +RV LD+ +PLR G+K+ L 
Subjt:  RVMRQGPWLFDKFFLMLSKPILMVKLTAMEFQFATFWVHFCKLPMDLYNKSMVERLGNAIGQFQEYDNGDCGYGWKESLCVRVTLDITRPLRLGIKVRLD

Query:  --EPLGNVWTPIRYEKLPEIYAYCGRIGH
          EP   +W   +YE+LP    +CGR+GH
Subjt:  --EPLGNVWTPIRYEKLPEIYAYCGRIGH

TrEMBL top hitse value%identityAlignment
A0A6J1BSZ1 uncharacterized protein LOC1110054811.7e-2641.09Show/hide
Query:  QTRVMRQGPWLFDKFFLMLSKPILMVKLTAMEFQFATFWVHFCKLPMDLYNKSMVERLGNAIGQFQEYDNGDCGYGWKESLCVRVTLDITRPLRLGIKVR
        + R++R GPW FD+  +++  P+ + K   M+F+  + WVHF  L +   NK+M  RLGNAIG F++ ++    + W   L VRV  D+ +PL  GIK+ 
Subjt:  QTRVMRQGPWLFDKFFLMLSKPILMVKLTAMEFQFATFWVHFCKLPMDLYNKSMVERLGNAIGQFQEYDNGDCGYGWKESLCVRVTLDITRPLRLGIKVR

Query:  LDEPLGNVWTPIRYEKLPEIYAYCGRIGH
        LD P+G  W PI+YE+LP+   +CGR+ H
Subjt:  LDEPLGNVWTPIRYEKLPEIYAYCGRIGH

A0A6J1D765 uncharacterized protein LOC1110179028.3e-2134.25Show/hide
Query:  LATQTRVMRQGPWLFDKFFLMLSKPILMVKLTAMEFQFATFWVHFCKLPMDLYNKSMVERLGNAIGQFQEYDNGDCGYGWK-ESLCVRVTLDITRPLRLG
        L+ ++RV+  GPW F+K  L+L+ P    +   M F F  FW+    +P +  +  M   LG  +G  +E + GD   GW    + VRV +D+++PLR G
Subjt:  LATQTRVMRQGPWLFDKFFLMLSKPILMVKLTAMEFQFATFWVHFCKLPMDLYNKSMVERLGNAIGQFQEYDNGDCGYGWK-ESLCVRVTLDITRPLRLG

Query:  IKVRLDEPLGNVWTPIRYEKLPEIYAYCGRIGHGTPVPLIGRARKNNVDSVSTDVPENYKKRVGDGLEGGSLKRARADEDE
        IK++  +   ++W P+RYEKLP+    CG+IGH       GR  +     V+T+ PE Y    GD L    LK++ +  +E
Subjt:  IKVRLDEPLGNVWTPIRYEKLPEIYAYCGRIGHGTPVPLIGRARKNNVDSVSTDVPENYKKRVGDGLEGGSLKRARADEDE

A0A6J1DU55 uncharacterized protein LOC1110231355.2e-3139.8Show/hide
Query:  RVMRQGPWLFDKFFLMLSKPILMVKLTAMEFQFATFWVHFCKLPMDLYNKSMVERLGNAIGQFQEYDNGDCGYGWKESLCVRVTLDITRPLRLGIKVRLD
        RVM+ GPW FDK  ++L KP     ++ +EF    FW+H   LPM   NK+M  RLGNAIG F + D  + G+ W  SL +RV +DIT+PLR GIK+ +D
Subjt:  RVMRQGPWLFDKFFLMLSKPILMVKLTAMEFQFATFWVHFCKLPMDLYNKSMVERLGNAIGQFQEYDNGDCGYGWKESLCVRVTLDITRPLRLGIKVRLD

Query:  EPLGNVWTPIRYEKLPEIYAYCGRIGHGTPVPLIGRARKNNVDSVSTDVPENYKKRVGD--GLEGGSLKRARADEDE-HSNSIEPTVEAVEQPRQE
         P+G  W PI+YE+LP+   +CG IGH +      R      DS +T     + + VG   G + G   ++ A ED   S+S+      VE+ +Q+
Subjt:  EPLGNVWTPIRYEKLPEIYAYCGRIGHGTPVPLIGRARKNNVDSVSTDVPENYKKRVGD--GLEGGSLKRARADEDE-HSNSIEPTVEAVEQPRQE

A0A6J1DX30 uncharacterized protein LOC1110248749.5e-2540.8Show/hide
Query:  QTRVMRQGPWLFDKFFLMLSKPILMVKLTAMEFQFATFWVHFCKLPMDLYNKSMVERLGNAIGQFQEYDNGDCGYGWKESLCVRVTLDITRPLRLGIKVR
        + ++ + GPW FD+  ++++KP+ ++  + ++F     WV F  LP+    + M  RLGNA+G F+E D  D    W  +L VRV LDI++PLR GIK+ 
Subjt:  QTRVMRQGPWLFDKFFLMLSKPILMVKLTAMEFQFATFWVHFCKLPMDLYNKSMVERLGNAIGQFQEYDNGDCGYGWKESLCVRVTLDITRPLRLGIKVR

Query:  LDEPLGNVWTPIRYEKLPEIYAYCG
        LD P+G  W PI+YE+LP+   +CG
Subjt:  LDEPLGNVWTPIRYEKLPEIYAYCG

A0A803Q6Y1 Uncharacterized protein7.8e-1937.01Show/hide
Query:  RVMRQGPWLFDKFFLMLSKPILMVKLTAMEFQFATFWVHFCKLPMDLYNKSMVERLGNAIGQFQEYDNGDCGYGWKESLCVRVTLDITRPLRLGIKVRLD
        RV+ Q PW F    ++L KP  +  LT  + +F+ FWV    +P    ++ + + LGN IG+F E        GW   L +RV +D+T+PLR G  +RL 
Subjt:  RVMRQGPWLFDKFFLMLSKPILMVKLTAMEFQFATFWVHFCKLPMDLYNKSMVERLGNAIGQFQEYDNGDCGYGWKESLCVRVTLDITRPLRLGIKVRLD

Query:  EPLGNVWTPIRYEKLPEIYAYCGRIGH
        +     W   RYE+LPE    CG +GH
Subjt:  EPLGNVWTPIRYEKLPEIYAYCGRIGH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G31430.1 unknown protein2.2e-1027.92Show/hide
Query:  VMRQGPWLFDKFFLMLSKPILMVKLTAMEFQFATFWVHFCKLPMDLYNKSMVERLGNAIGQFQEYDNGDCGYGWKESLCVRVTLDITRPLRLGIKVRLDE
        V+R+GPW F+ + ++L +    + L    F F  FWV    +P    N+ +VE +G A+GQ  + D         +   V +  DIT PLR     +   
Subjt:  VMRQGPWLFDKFFLMLSKPILMVKLTAMEFQFATFWVHFCKLPMDLYNKSMVERLGNAIGQFQEYDNGDCGYGWKESLCVRVTLDITRPLRLGIKVRLDE

Query:  PLGNVWTPIRYEKLPEIYAYCGRIGHGTPVPLIGRARKNNVDSVSTDV--PENY
         + N     RYE+L      CG + H     LI    +   D    D   P+ Y
Subjt:  PLGNVWTPIRYEKLPEIYAYCGRIGHGTPVPLIGRARKNNVDSVSTDV--PENY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGACCATTCCGCATCGCGATGACCTTGCGACACAAACGAGAGTGATGCGGCAAGGACCTTGGCTTTTCGACAAATTTTTTCTTATGCTCTCGAAGCCCATTCTAAT
GGTCAAACTGACAGCAATGGAGTTCCAATTTGCAACTTTTTGGGTCCATTTTTGCAAACTCCCAATGGATCTCTATAATAAGTCGATGGTGGAAAGACTAGGCAATGCAA
TAGGCCAATTCCAGGAATATGACAATGGCGATTGTGGGTACGGATGGAAGGAAAGCCTATGTGTTCGTGTCACCCTCGACATAACTCGCCCTTTGCGTCTTGGCATCAAG
GTCCGACTAGACGAACCGCTAGGCAATGTTTGGACTCCTATAAGGTACGAAAAGCTCCCTGAAATCTATGCTTATTGTGGCCGCATTGGACACGGTACGCCCGTGCCGTT
AATCGGTCGGGCTCGGAAAAATAATGTCGACTCAGTTTCAACTGATGTTCCTGAAAATTATAAGAAACGGGTTGGTGATGGACTTGAAGGCGGGTCTTTGAAACGTGCTC
GTGCTGACGAGGATGAGCATTCCAACTCGATTGAACCAACGGTGGAGGCTGTTGAACAACCCCGCCAGGAGCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGACCATTCCGCATCGCGATGACCTTGCGACACAAACGAGAGTGATGCGGCAAGGACCTTGGCTTTTCGACAAATTTTTTCTTATGCTCTCGAAGCCCATTCTAAT
GGTCAAACTGACAGCAATGGAGTTCCAATTTGCAACTTTTTGGGTCCATTTTTGCAAACTCCCAATGGATCTCTATAATAAGTCGATGGTGGAAAGACTAGGCAATGCAA
TAGGCCAATTCCAGGAATATGACAATGGCGATTGTGGGTACGGATGGAAGGAAAGCCTATGTGTTCGTGTCACCCTCGACATAACTCGCCCTTTGCGTCTTGGCATCAAG
GTCCGACTAGACGAACCGCTAGGCAATGTTTGGACTCCTATAAGGTACGAAAAGCTCCCTGAAATCTATGCTTATTGTGGCCGCATTGGACACGGTACGCCCGTGCCGTT
AATCGGTCGGGCTCGGAAAAATAATGTCGACTCAGTTTCAACTGATGTTCCTGAAAATTATAAGAAACGGGTTGGTGATGGACTTGAAGGCGGGTCTTTGAAACGTGCTC
GTGCTGACGAGGATGAGCATTCCAACTCGATTGAACCAACGGTGGAGGCTGTTGAACAACCCCGCCAGGAGCCATGA
Protein sequenceShow/hide protein sequence
MSTIPHRDDLATQTRVMRQGPWLFDKFFLMLSKPILMVKLTAMEFQFATFWVHFCKLPMDLYNKSMVERLGNAIGQFQEYDNGDCGYGWKESLCVRVTLDITRPLRLGIK
VRLDEPLGNVWTPIRYEKLPEIYAYCGRIGHGTPVPLIGRARKNNVDSVSTDVPENYKKRVGDGLEGGSLKRARADEDEHSNSIEPTVEAVEQPRQEP