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Lag0008703 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008703
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr9:28379278..28379676
RNA-Seq ExpressionLag0008703
SyntenyLag0008703
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF6140913.1 hypothetical protein GIB67_042326 [Kingdonia uniflora]1.5e-1446.96Show/hide
Query:  VERAVPTNFLAPD-YHPPSCIIY-SNKGNFELKVDF-SLLPSFSGSAGENPCLHKLDFFKRYSDLVKCDRHIEDWIKLRIFPYSLKGEAREWLYQLPSRS
        VER    N + P     PSCI+   N GNFELK +F S+LP F GS  ENP  H  D F  +  L+  +R IED +KLR+FP+SL G AR+WLY L   S
Subjt:  VERAVPTNFLAPD-YHPPSCIIY-SNKGNFELKVDF-SLLPSFSGSAGENPCLHKLDFFKRYSDLVKCDRHIEDWIKLRIFPYSLKGEAREWLYQLPSRS

Query:  VSKWPQLSRLLVDKY
        V+ + QL +  + KY
Subjt:  VSKWPQLSRLLVDKY

KAF6147432.1 hypothetical protein GIB67_012970 [Kingdonia uniflora]3.2e-1246.94Show/hide
Query:  PSCIIY-SNKGNFELKVDF-SLLPSFSGSAGENPCLHKLDFFKRYSDLVKCDRHIEDWIKLRIFPYSLKGEAREWLYQLPSRSVSKWPQLSRLLVDKY
        PSCI+   N GNFELK  F S+LP F GS  ENP  H  D F+ +  L+  +R  ED +KLR+FP+SL G A +WLY L    V+ + QL +  + KY
Subjt:  PSCIIY-SNKGNFELKVDF-SLLPSFSGSAGENPCLHKLDFFKRYSDLVKCDRHIEDWIKLRIFPYSLKGEAREWLYQLPSRSVSKWPQLSRLLVDKY

KAF6171370.1 hypothetical protein GIB67_009511 [Kingdonia uniflora]6.4e-1348.98Show/hide
Query:  PSCIIY-SNKGNFELKVDF-SLLPSFSGSAGENPCLHKLDFFKRYSDLVKCDRHIEDWIKLRIFPYSLKGEAREWLYQLPSRSVSKWPQLSRLLVDKY
        PSCI+   N GNFELK  F S+LP F GS  ENP  H L  F+ +  L+  +R  ED +KLR+FP+SL G AR+WLY L   SV+ + QL +  + KY
Subjt:  PSCIIY-SNKGNFELKVDF-SLLPSFSGSAGENPCLHKLDFFKRYSDLVKCDRHIEDWIKLRIFPYSLKGEAREWLYQLPSRSVSKWPQLSRLLVDKY

XP_031275687.1 LOW QUALITY PROTEIN: uncharacterized protein LOC116134142 [Pistacia vera]9.2e-1243.43Show/hide
Query:  PSCIIYSNK--GNFELKVD-FSLLPSFSGSAGENPCLHKLDFFKRYSDLVKCDRHIEDWIKLRIFPYSLKGEAREWLYQLPSRSVSKWPQLSRLLVDKY
        P CI Y++   G FELK     LLP F G AGE+P  H  +F    S + K +  +E+ +KLR+FP+SL   A+EWLY LPS +++ W ++ RL ++KY
Subjt:  PSCIIYSNK--GNFELKVD-FSLLPSFSGSAGENPCLHKLDFFKRYSDLVKCDRHIEDWIKLRIFPYSLKGEAREWLYQLPSRSVSKWPQLSRLLVDKY

XP_031282183.1 LOW QUALITY PROTEIN: uncharacterized protein LOC116140743 [Pistacia vera]1.6e-1143.43Show/hide
Query:  PSCIIYSN--KGNFELKV-DFSLLPSFSGSAGENPCLHKLDFFKRYSDLVKCDRHIEDWIKLRIFPYSLKGEAREWLYQLPSRSVSKWPQLSRLLVDKY
        P CI Y++  +G FELK     LLP F G AGE+P  H  +F    S + K +   E+ +KLR FP+SL   A+EWLY LPS +++ W ++ RL ++KY
Subjt:  PSCIIYSN--KGNFELKV-DFSLLPSFSGSAGENPCLHKLDFFKRYSDLVKCDRHIEDWIKLRIFPYSLKGEAREWLYQLPSRSVSKWPQLSRLLVDKY

TrEMBL top hitse value%identityAlignment
A0A6P9EXQ5 uncharacterized protein LOC1183488923.8e-1142.99Show/hide
Query:  APDYH-PPSCIIYSN---KGNFELKVD-FSLLPSFSGSAGENPCLHKLDFFKRYSDLVKCDRHIEDWIKLRIFPYSLKGEAREWLYQLPSRSVSKWPQLS
        APD +  P CI +        FELK     LLP+F G AGE+P  H  +    Y+ + K     E+ IKLR FP+SLK  A+ WLY LPSRS+  W ++ 
Subjt:  APDYH-PPSCIIYSN---KGNFELKVD-FSLLPSFSGSAGENPCLHKLDFFKRYSDLVKCDRHIEDWIKLRIFPYSLKGEAREWLYQLPSRSVSKWPQLS

Query:  RLLVDKY
        RL ++KY
Subjt:  RLLVDKY

A0A7J7LE58 Retrotrans_gag domain-containing protein7.4e-1546.96Show/hide
Query:  VERAVPTNFLAPD-YHPPSCIIY-SNKGNFELKVDF-SLLPSFSGSAGENPCLHKLDFFKRYSDLVKCDRHIEDWIKLRIFPYSLKGEAREWLYQLPSRS
        VER    N + P     PSCI+   N GNFELK +F S+LP F GS  ENP  H  D F  +  L+  +R IED +KLR+FP+SL G AR+WLY L   S
Subjt:  VERAVPTNFLAPD-YHPPSCIIY-SNKGNFELKVDF-SLLPSFSGSAGENPCLHKLDFFKRYSDLVKCDRHIEDWIKLRIFPYSLKGEAREWLYQLPSRS

Query:  VSKWPQLSRLLVDKY
        V+ + QL +  + KY
Subjt:  VSKWPQLSRLLVDKY

A0A7J7LXX3 Uncharacterized protein1.5e-1246.94Show/hide
Query:  PSCIIY-SNKGNFELKVDF-SLLPSFSGSAGENPCLHKLDFFKRYSDLVKCDRHIEDWIKLRIFPYSLKGEAREWLYQLPSRSVSKWPQLSRLLVDKY
        PSCI+   N GNFELK  F S+LP F GS  ENP  H  D F+ +  L+  +R  ED +KLR+FP+SL G A +WLY L    V+ + QL +  + KY
Subjt:  PSCIIY-SNKGNFELKVDF-SLLPSFSGSAGENPCLHKLDFFKRYSDLVKCDRHIEDWIKLRIFPYSLKGEAREWLYQLPSRSVSKWPQLSRLLVDKY

A0A7J7MB45 Retrotrans_gag domain-containing protein2.2e-1145.92Show/hide
Query:  PSCIIY-SNKGNFELKVDF-SLLPSFSGSAGENPCLHKLDFFKRYSDLVKCDRHIEDWIKLRIFPYSLKGEAREWLYQLPSRSVSKWPQLSRLLVDKY
        PSCI+   N GNFEL   F S+LP F GS  ENP  H  D F+ +  L+  +R  ED +KL +FP+SL G AR+WLY L   SV+ + QL +  + K+
Subjt:  PSCIIY-SNKGNFELKVDF-SLLPSFSGSAGENPCLHKLDFFKRYSDLVKCDRHIEDWIKLRIFPYSLKGEAREWLYQLPSRSVSKWPQLSRLLVDKY

A0A7J7NWD7 NAM-associated domain-containing protein3.1e-1348.98Show/hide
Query:  PSCIIY-SNKGNFELKVDF-SLLPSFSGSAGENPCLHKLDFFKRYSDLVKCDRHIEDWIKLRIFPYSLKGEAREWLYQLPSRSVSKWPQLSRLLVDKY
        PSCI+   N GNFELK  F S+LP F GS  ENP  H L  F+ +  L+  +R  ED +KLR+FP+SL G AR+WLY L   SV+ + QL +  + KY
Subjt:  PSCIIY-SNKGNFELKVDF-SLLPSFSGSAGENPCLHKLDFFKRYSDLVKCDRHIEDWIKLRIFPYSLKGEAREWLYQLPSRSVSKWPQLSRLLVDKY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATATCCAGCAGACACTCGACCAACCATCCTCTAAGATCAAAAGGGTCGAGCGTGCAGTGCCAACCAATTTTTTAGCTCCTGATTATCATCCGCCCTCATGCATCAT
TTATTCTAACAAAGGTAATTTCGAACTTAAAGTTGATTTTAGCTTACTCCCTTCTTTTAGTGGTTCTGCAGGAGAAAATCCTTGTCTCCACAAGTTGGACTTCTTCAAGC
GTTATTCCGACTTGGTGAAATGCGATAGACATATCGAAGATTGGATCAAATTGAGGATTTTTCCTTATTCCTTGAAAGGTGAAGCTAGGGAGTGGTTGTATCAATTACCT
TCCAGATCGGTGTCAAAATGGCCCCAATTGAGTCGGCTTTTGGTGGATAAGTACCTCTCGTCTGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATATCCAGCAGACACTCGACCAACCATCCTCTAAGATCAAAAGGGTCGAGCGTGCAGTGCCAACCAATTTTTTAGCTCCTGATTATCATCCGCCCTCATGCATCAT
TTATTCTAACAAAGGTAATTTCGAACTTAAAGTTGATTTTAGCTTACTCCCTTCTTTTAGTGGTTCTGCAGGAGAAAATCCTTGTCTCCACAAGTTGGACTTCTTCAAGC
GTTATTCCGACTTGGTGAAATGCGATAGACATATCGAAGATTGGATCAAATTGAGGATTTTTCCTTATTCCTTGAAAGGTGAAGCTAGGGAGTGGTTGTATCAATTACCT
TCCAGATCGGTGTCAAAATGGCCCCAATTGAGTCGGCTTTTGGTGGATAAGTACCTCTCGTCTGTGTGA
Protein sequenceShow/hide protein sequence
MNIQQTLDQPSSKIKRVERAVPTNFLAPDYHPPSCIIYSNKGNFELKVDFSLLPSFSGSAGENPCLHKLDFFKRYSDLVKCDRHIEDWIKLRIFPYSLKGEAREWLYQLP
SRSVSKWPQLSRLLVDKYLSSV