CuGenDBv2

Gene ID	Lag0008709
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic
Genome location	chr9:28484139..28486042
RNA-Seq Expression	Lag0008709
Synteny	Lag0008709
Gene Ontology terms	GO:1990641 - response to iron ion starvation (biological process) GO:0009536 - plastid (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR009631 - CGLD27-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7035179.1 putative protein ycf36 [Cucurbita argyrosperma subsp. argyrosperma]

1.7e-51

93.64

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Query:  MLRLNVYCSSCCSLIRNGRDVRTDFGFAPSLVIRLRRNRRLNRGVLAKALKDDQTDGAGGRFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELG
        MLRLNVYCSSCCSLI  GRDVRT FGF PSLVIRLRRNRRLNR VLAKALKDDQ DGAGGRF GQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELG
Subjt:  MLRLNVYCSSCCSLIRNGRDVRTDFGFAPSLVIRLRRNRRLNRGVLAKALKDDQTDGAGGRFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELG

Query:  AGPFFLRLGG
        AGPFFLRLGG
Subjt:  AGPFFLRLGG

XP_022947583.1 protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic [Cucurbita moschata]

1.7e-51

93.64

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Query:  MLRLNVYCSSCCSLIRNGRDVRTDFGFAPSLVIRLRRNRRLNRGVLAKALKDDQTDGAGGRFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELG
        MLRLNVYCSSCCSLI  GRDVRT FGF PSLVIRLRRNRRLNR VLAKALKDDQ DGAGGRF GQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELG
Subjt:  MLRLNVYCSSCCSLIRNGRDVRTDFGFAPSLVIRLRRNRRLNRGVLAKALKDDQTDGAGGRFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELG

Query:  AGPFFLRLGG
        AGPFFLRLGG
Subjt:  AGPFFLRLGG

XP_023006930.1 protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic [Cucurbita maxima]

1.7e-51

93.64

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Query:  MLRLNVYCSSCCSLIRNGRDVRTDFGFAPSLVIRLRRNRRLNRGVLAKALKDDQTDGAGGRFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELG
        MLRLNVYCSSCCSLI  GRDVRT FGF PSLVIRLRRNRRLNR VLAKALKDDQ DGAGGRF GQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELG
Subjt:  MLRLNVYCSSCCSLIRNGRDVRTDFGFAPSLVIRLRRNRRLNRGVLAKALKDDQTDGAGGRFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELG

Query:  AGPFFLRLGG
        AGPFFLRLGG
Subjt:  AGPFFLRLGG

XP_023534221.1 protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic [Cucurbita pepo subsp. pepo]

5.0e-51

92.73

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Query:  MLRLNVYCSSCCSLIRNGRDVRTDFGFAPSLVIRLRRNRRLNRGVLAKALKDDQTDGAGGRFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELG
        MLRLNVYCSSCCSLI  GRDVRT FGF PSLVIR RRNRRLNR VLAKALKDDQ DGAGGRF GQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELG
Subjt:  MLRLNVYCSSCCSLIRNGRDVRTDFGFAPSLVIRLRRNRRLNRGVLAKALKDDQTDGAGGRFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELG

Query:  AGPFFLRLGG
        AGPFFLRLGG
Subjt:  AGPFFLRLGG

XP_038900298.1 protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic [Benincasa hispida]

3.5e-44

84.55

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Query:  MLRLNVYCSSCCSLIRNGRDVRTDFGFAPSLVIRLRRNRRLNRGVLAKALKDDQTDGAGGRFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELG
        M RLNVYCSSCCSLIRN +DVRT F F      +LR NRRLN  VLAKALKDDQTDG GGRFSGQKWDPGLEIEVPFEQRPVNEYSSLKDS LYSWGELG
Subjt:  MLRLNVYCSSCCSLIRNGRDVRTDFGFAPSLVIRLRRNRRLNRGVLAKALKDDQTDGAGGRFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELG

Query:  AGPFFLRLGG
        AGPFFLRLGG
Subjt:  AGPFFLRLGG

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TRK5 Uncharacterized protein

2.7e-42

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Query:  MLRLNVYCSSCCSLIRNGRDVRTDFGFAPSLVIRLRRNRRLNRGVLAKALKDDQTDGAGGRFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELG
        MLRLN+YC+SCCSLIRN ++V T F F      +LR NRRLN  VLAKALKDDQTDG GGRFSGQKWDPGLEIEVPFEQRPVNEYSSLKDS  YSWGELG
Subjt:  MLRLNVYCSSCCSLIRNGRDVRTDFGFAPSLVIRLRRNRRLNRGVLAKALKDDQTDGAGGRFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELG

Query:  AGPFFLRLGG
        AGPFF+RLGG
Subjt:  AGPFFLRLGG

A0A5D3BLA1 Uncharacterized protein

2.7e-42

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Query:  MLRLNVYCSSCCSLIRNGRDVRTDFGFAPSLVIRLRRNRRLNRGVLAKALKDDQTDGAGGRFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELG
        MLRLN+YC+SCCSLIRN ++V T F F      +LR NRRLN  VLAKALKDDQTDG GGRFSGQKWDPGLEIEVPFEQRPVNEYSSLKDS  YSWGELG
Subjt:  MLRLNVYCSSCCSLIRNGRDVRTDFGFAPSLVIRLRRNRRLNRGVLAKALKDDQTDGAGGRFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELG

Query:  AGPFFLRLGG
        AGPFF+RLGG
Subjt:  AGPFFLRLGG

A0A6J1D5Q7 uncharacterized protein LOC111017873

3.2e-43

80.91

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Query:  MLRLNVYCSSCCSLIRNGRDVRTDFGFAPSLVIRLRRNRRLNRGVLAKALKDDQTDGAGGRFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELG
        MLRLN+YCS C  LIR+GRDVR  FG+  S VIRLR NRRL+ GV AKALKDDQ DG GGRF G+ WDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELG
Subjt:  MLRLNVYCSSCCSLIRNGRDVRTDFGFAPSLVIRLRRNRRLNRGVLAKALKDDQTDGAGGRFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELG

Query:  AGPFFLRLGG
         GPFFLRLGG
Subjt:  AGPFFLRLGG

A0A6J1G705 protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic

8.3e-52

93.64

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Query:  MLRLNVYCSSCCSLIRNGRDVRTDFGFAPSLVIRLRRNRRLNRGVLAKALKDDQTDGAGGRFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELG
        MLRLNVYCSSCCSLI  GRDVRT FGF PSLVIRLRRNRRLNR VLAKALKDDQ DGAGGRF GQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELG
Subjt:  MLRLNVYCSSCCSLIRNGRDVRTDFGFAPSLVIRLRRNRRLNRGVLAKALKDDQTDGAGGRFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELG

Query:  AGPFFLRLGG
        AGPFFLRLGG
Subjt:  AGPFFLRLGG

A0A6J1L1J9 protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic

8.3e-52

93.64

Show/hide

Query:  MLRLNVYCSSCCSLIRNGRDVRTDFGFAPSLVIRLRRNRRLNRGVLAKALKDDQTDGAGGRFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELG
        MLRLNVYCSSCCSLI  GRDVRT FGF PSLVIRLRRNRRLNR VLAKALKDDQ DGAGGRF GQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELG
Subjt:  MLRLNVYCSSCCSLIRNGRDVRTDFGFAPSLVIRLRRNRRLNRGVLAKALKDDQTDGAGGRFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELG

Query:  AGPFFLRLGG
        AGPFFLRLGG
Subjt:  AGPFFLRLGG

SwissProt top hits

e value

%identity

Alignment

Q9FN15 Protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic

1.3e-17

58.67

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Query:  RNRRLNRGVLAKALKDDQTDGAGG-RFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGG
        + + L   V  KA++D   +G G   FSGQ WDP  EIEVP +QRPVNEYSSLK+  LYSWGELG   FF+RLGG
Subjt:  RNRRLNRGVLAKALKDDQTDGAGG-RFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGG

Arabidopsis top hits

e value

%identity

Alignment

AT5G67370.1 Protein of unknown function (DUF1230)

9.2e-19

58.67

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Query:  RNRRLNRGVLAKALKDDQTDGAGG-RFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGG
        + + L   V  KA++D   +G G   FSGQ WDP  EIEVP +QRPVNEYSSLK+  LYSWGELG   FF+RLGG
Subjt:  RNRRLNRGVLAKALKDDQTDGAGG-RFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGG

Sequences

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CDS sequence

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ATGCTCAGGCTGAATGTGTACTGCAGCAGTTGCTGCTCTCTGATTCGGAACGGCAGAGATGTTAGGACCGACTTCGGATTTGCGCCGTCGCTGGTGATCCGATTGAGGCG
AAATCGGAGGCTGAATCGAGGGGTTCTGGCGAAGGCCTTGAAGGATGATCAGACCGACGGCGCCGGCGGCAGATTCTCCGGGCAGAAATGGGACCCTGGCTTGGAAATCG
AAGTCCCTTTTGAACAACGGCCGGTGAATGAATACTCATCTCTAAAAGACTCGGCGCTGTATTCATGGGGGGAGCTGGGAGCAGGGCCTTTCTTCCTTCGCCTTGGGGGC
TTTGGAACCTCTGCGATTCGTGCTTGCTGCTGGAATTGGAACTCTTCTCCTCGTCTCCTTAATTGTCTTGAGAATATATCTGGCAAGCTTCTCCATTATCCATCATTATA
G

mRNA sequence

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Protein sequence

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MLRLNVYCSSCCSLIRNGRDVRTDFGFAPSLVIRLRRNRRLNRGVLAKALKDDQTDGAGGRFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGG
FGTSAIRACCWNWNSSPRLLNCLENISGKLLHYPSL

Lag0008709 (gene) of Sponge gourd (AG-4) v1 genome