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Lag0008725 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008725
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr9:28752204..28752689
RNA-Seq ExpressionLag0008725
SyntenyLag0008725
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155000.1 uncharacterized protein LOC111022144 [Momordica charantia]1.8e-2356.32Show/hide
Query:  DFKRYGPPSFDGQSENPMVAKRWVTDLEAPFDLMNCNDRLKIRGAVFMLKDDARMWWYFVAVAEDHANQSISWERFKDLLYDYCFSE
        DFKRYGPP+FDG+SE    A+ W+ +LEA +  + C D+ K++GAVFML+ +A  WW  +A AEDHAN +I W RFKDLLYDY + E
Subjt:  DFKRYGPPSFDGQSENPMVAKRWVTDLEAPFDLMNCNDRLKIRGAVFMLKDDARMWWYFVAVAEDHANQSISWERFKDLLYDYCFSE

XP_022156330.1 uncharacterized protein LOC111023250 [Momordica charantia]2.0e-2256.32Show/hide
Query:  DFKRYGPPSFDGQSENPMVAKRWVTDLEAPFDLMNCNDRLKIRGAVFMLKDDARMWWYFVAVAEDHANQSISWERFKDLLYDYCFSE
        DFKRYGPP+FDG S+    A+ WV +LEA +  + C D+ K++GAVFML+  A  WW  VA AEDHAN  ++W RFKDLLYDY + E
Subjt:  DFKRYGPPSFDGQSENPMVAKRWVTDLEAPFDLMNCNDRLKIRGAVFMLKDDARMWWYFVAVAEDHANQSISWERFKDLLYDYCFSE

XP_022157398.1 uncharacterized protein LOC111024105 [Momordica charantia]2.0e-2250.93Show/hide
Query:  PPPPPPAPPAAPILITPKALQTIDFKRYGPPSFDGQSENPMVAKRWVTDLEAPFDLMNCNDRLKIRGAVFMLKDDARMWWYFVAVAEDHANQSISWERFK
        PP P  AP   P +   +     DFKR+GPP F+G SE P  A+ WV +LEA +  + C+D  K+RGAVFML+ +A  WW  VA AEDHAN  I+W RFK
Subjt:  PPPPPPAPPAAPILITPKALQTIDFKRYGPPSFDGQSENPMVAKRWVTDLEAPFDLMNCNDRLKIRGAVFMLKDDARMWWYFVAVAEDHANQSISWERFK

Query:  DLLYDYCF
        +LLY+Y F
Subjt:  DLLYDYCF

XP_022158637.1 uncharacterized protein LOC111025088 [Momordica charantia]1.2e-2256.32Show/hide
Query:  DFKRYGPPSFDGQSENPMVAKRWVTDLEAPFDLMNCNDRLKIRGAVFMLKDDARMWWYFVAVAEDHANQSISWERFKDLLYDYCFSE
        DFKRYGPP+FDG SE    A+ WV +LEA +  + C D+ K++G VFML+ +A  WW  +AVAEDHAN  + W RFKDLLYDY + E
Subjt:  DFKRYGPPSFDGQSENPMVAKRWVTDLEAPFDLMNCNDRLKIRGAVFMLKDDARMWWYFVAVAEDHANQSISWERFKDLLYDYCFSE

XP_022158749.1 uncharacterized protein LOC111025213 [Momordica charantia]3.1e-2346.32Show/hide
Query:  MQEVNPQIPPVQHGDDLPPPPP--------PPAPPAAPILITPKALQTIDFKRYGPPSFDGQSENPMVAKRWVTDLEAPFDLMNCNDRLKIRGAVFMLKD
        M+E        + G  +PP PP        PP PPA P     +A    DFKRYGPP+FDG+SE    A+ W+ +LEA +  + C D+ K++GAVFML+ 
Subjt:  MQEVNPQIPPVQHGDDLPPPPP--------PPAPPAAPILITPKALQTIDFKRYGPPSFDGQSENPMVAKRWVTDLEAPFDLMNCNDRLKIRGAVFMLKD

Query:  DARMWWYFVAVAEDHANQSISWERFKDLLYDYCFSE
        +A  WW  VA AEDHAN  I W RFK+LLYDY + E
Subjt:  DARMWWYFVAVAEDHANQSISWERFKDLLYDYCFSE

TrEMBL top hitse value%identityAlignment
A0A6J1DL73 uncharacterized protein LOC1110221448.7e-2456.32Show/hide
Query:  DFKRYGPPSFDGQSENPMVAKRWVTDLEAPFDLMNCNDRLKIRGAVFMLKDDARMWWYFVAVAEDHANQSISWERFKDLLYDYCFSE
        DFKRYGPP+FDG+SE    A+ W+ +LEA +  + C D+ K++GAVFML+ +A  WW  +A AEDHAN +I W RFKDLLYDY + E
Subjt:  DFKRYGPPSFDGQSENPMVAKRWVTDLEAPFDLMNCNDRLKIRGAVFMLKDDARMWWYFVAVAEDHANQSISWERFKDLLYDYCFSE

A0A6J1DQ01 uncharacterized protein LOC1110232509.6e-2356.32Show/hide
Query:  DFKRYGPPSFDGQSENPMVAKRWVTDLEAPFDLMNCNDRLKIRGAVFMLKDDARMWWYFVAVAEDHANQSISWERFKDLLYDYCFSE
        DFKRYGPP+FDG S+    A+ WV +LEA +  + C D+ K++GAVFML+  A  WW  VA AEDHAN  ++W RFKDLLYDY + E
Subjt:  DFKRYGPPSFDGQSENPMVAKRWVTDLEAPFDLMNCNDRLKIRGAVFMLKDDARMWWYFVAVAEDHANQSISWERFKDLLYDYCFSE

A0A6J1DT93 uncharacterized protein LOC1110241059.6e-2350.93Show/hide
Query:  PPPPPPAPPAAPILITPKALQTIDFKRYGPPSFDGQSENPMVAKRWVTDLEAPFDLMNCNDRLKIRGAVFMLKDDARMWWYFVAVAEDHANQSISWERFK
        PP P  AP   P +   +     DFKR+GPP F+G SE P  A+ WV +LEA +  + C+D  K+RGAVFML+ +A  WW  VA AEDHAN  I+W RFK
Subjt:  PPPPPPAPPAAPILITPKALQTIDFKRYGPPSFDGQSENPMVAKRWVTDLEAPFDLMNCNDRLKIRGAVFMLKDDARMWWYFVAVAEDHANQSISWERFK

Query:  DLLYDYCF
        +LLY+Y F
Subjt:  DLLYDYCF

A0A6J1DXQ7 uncharacterized protein LOC1110250885.6e-2356.32Show/hide
Query:  DFKRYGPPSFDGQSENPMVAKRWVTDLEAPFDLMNCNDRLKIRGAVFMLKDDARMWWYFVAVAEDHANQSISWERFKDLLYDYCFSE
        DFKRYGPP+FDG SE    A+ WV +LEA +  + C D+ K++G VFML+ +A  WW  +AVAEDHAN  + W RFKDLLYDY + E
Subjt:  DFKRYGPPSFDGQSENPMVAKRWVTDLEAPFDLMNCNDRLKIRGAVFMLKDDARMWWYFVAVAEDHANQSISWERFKDLLYDYCFSE

A0A6J1E0B4 uncharacterized protein LOC1110252131.5e-2346.32Show/hide
Query:  MQEVNPQIPPVQHGDDLPPPPP--------PPAPPAAPILITPKALQTIDFKRYGPPSFDGQSENPMVAKRWVTDLEAPFDLMNCNDRLKIRGAVFMLKD
        M+E        + G  +PP PP        PP PPA P     +A    DFKRYGPP+FDG+SE    A+ W+ +LEA +  + C D+ K++GAVFML+ 
Subjt:  MQEVNPQIPPVQHGDDLPPPPP--------PPAPPAAPILITPKALQTIDFKRYGPPSFDGQSENPMVAKRWVTDLEAPFDLMNCNDRLKIRGAVFMLKD

Query:  DARMWWYFVAVAEDHANQSISWERFKDLLYDYCFSE
        +A  WW  VA AEDHAN  I W RFK+LLYDY + E
Subjt:  DARMWWYFVAVAEDHANQSISWERFKDLLYDYCFSE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGAAGTTAATCCCCAGATTCCCCCTGTACAGCACGGAGACGACCTTCCACCTCCCCCTCCTCCTCCGGCCCCTCCTGCAGCTCCTATATTGATCACCCCGAAAGC
CCTCCAGACCATAGACTTCAAGCGCTATGGGCCACCCTCTTTTGACGGGCAGTCCGAGAATCCTATGGTAGCGAAGCGGTGGGTCACTGATTTAGAGGCACCGTTTGACC
TCATGAACTGTAATGATCGCCTGAAGATTAGAGGAGCAGTCTTTATGCTCAAGGATGACGCTCGCATGTGGTGGTATTTTGTGGCAGTCGCCGAAGATCATGCTAATCAG
TCGATTTCATGGGAAAGGTTCAAAGACCTGTTGTACGATTATTGCTTCTCGGAGAGGATGACAAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGGAAGTTAATCCCCAGATTCCCCCTGTACAGCACGGAGACGACCTTCCACCTCCCCCTCCTCCTCCGGCCCCTCCTGCAGCTCCTATATTGATCACCCCGAAAGC
CCTCCAGACCATAGACTTCAAGCGCTATGGGCCACCCTCTTTTGACGGGCAGTCCGAGAATCCTATGGTAGCGAAGCGGTGGGTCACTGATTTAGAGGCACCGTTTGACC
TCATGAACTGTAATGATCGCCTGAAGATTAGAGGAGCAGTCTTTATGCTCAAGGATGACGCTCGCATGTGGTGGTATTTTGTGGCAGTCGCCGAAGATCATGCTAATCAG
TCGATTTCATGGGAAAGGTTCAAAGACCTGTTGTACGATTATTGCTTCTCGGAGAGGATGACAAAGTGA
Protein sequenceShow/hide protein sequence
MQEVNPQIPPVQHGDDLPPPPPPPAPPAAPILITPKALQTIDFKRYGPPSFDGQSENPMVAKRWVTDLEAPFDLMNCNDRLKIRGAVFMLKDDARMWWYFVAVAEDHANQ
SISWERFKDLLYDYCFSERMTK