CuGenDBv2

Gene ID	Lag0008733
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Reverse transcriptase domain-containing protein
Genome location	chr9:28854571..28863029
RNA-Seq Expression	Lag0008733
Synteny	Lag0008733
Gene Ontology terms	GO:0003676 - nucleic acid binding (molecular function) GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domains	IPR002156 - Ribonuclease H domain IPR026960 - Reverse transcriptase zinc-binding domain IPR044730 - Ribonuclease H-like domain, plant type

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

ONI01138.1 hypothetical protein PRUPE_6G123900 [Prunus persica]

4.5e-119

37.42

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Query:  NPNTGEEAQQYISQVLSVSCCPCHQQYLGLPSFMPRNRSGVLKFVKDHIWHQIQGWKGKFFSVAGKEVLLKSIVQAILCYTMNCFRLPRGLIKEIHRTMA
        +PN        I  VL+V    CH+ YLGLP+   + R  + + +KD +W  I GWK K  S AGKE+L+K+++QAI  Y+M+CFR+P+GL KE++  MA
Subjt:  NPNTGEEAQQYISQVLSVSCCPCHQQYLGLPSFMPRNRSGVLKFVKDHIWHQIQGWKGKFFSVAGKEVLLKSIVQAILCYTMNCFRLPRGLIKEIHRTMA

Query:  RFWWNGSEDERRMHWLSWDSLCLPKCLGGLGFRNMELFNQALLAKQCWRVLQDPSSLLGSVLKGRYFPQSGFLEADIGSRPSFVWRSLLWGRELLVRGCR
        RFWW  ++D+R +HW+ W+ LC  K  GGLGFR++E FNQALLAKQCWR+L+ P SL+  + + RY P   FLEA++G+ PSF+WRSL WG+ELL +G R
Subjt:  RFWWNGSEDERRMHWLSWDSLCLPKCLGGLGFRNMELFNQALLAKQCWRVLQDPSSLLGSVLKGRYFPQSGFLEADIGSRPSFVWRSLLWGRELLVRGCR

Query:  WRIGNGRTTPIYGSNWLPNEFSLQIQSAPVLSPTSTVSELFTASGGWNEALLRTIFNGADCEAFLRIPLRHGSEEDRLIWHFEKHGNFSVKSGYRLAQTL
        WR+G+G +  +Y   WLP     +I S P L  ++ V +LFT+SG WN  LL+ IF   + +A L+IPL   +  D LIWH+E++G +SVKSGYRLA   
Subjt:  WRIGNGRTTPIYGSNWLPNEFSLQIQSAPVLSPTSTVSELFTASGGWNEALLRTIFNGADCEAFLRIPLRHGSEEDRLIWHFEKHGNFSVKSGYRLAQTL

Query:  AIQDRPGSSNSERVHM---WWSGLWRLNVSNKHKFFLWRLCHDRLPTMVNLLKRGLSVSPLCVLCDDDAEDCLHLFWTCPVVKSMWLGSRFALLHQPFSH
          +D+     S RV +   +W  +W L + NK KFFLWR   D LP    L  R ++ +P+C  C   AE  LH  W C   K +W  S +  + + +  
Subjt:  AIQDRPGSSNSERVHM---WWSGLWRLNVSNKHKFFLWRLCHDRLPTMVNLLKRGLSVSPLCVLCDDDAEDCLHLFWTCPVVKSMWLGSRFALLHQPFSH

Query:  LRFEEIIGAMKDKQTGPDFELVVIFWWSVWNLQNSLSSGGQPDG--------RDLWAYSSDYLSAFHVGGKRCAAGDCSRAQSRDQEERCVWRPPPNREL
          F E+  A++   +G +  L     W +WN +NS    G+ +           L    SD  +  H    R         QS  Q     WRPPP    
Subjt:  LRFEEIIGAMKDKQTGPDFELVVIFWWSVWNLQNSLSSGGQPDG--------RDLWAYSSDYLSAFHVGGKRCAAGDCSRAQSRDQEERCVWRPPPNREL

Query:  KLNIDASVRPDTGEAGGGFVLRGADGEVFMVACL-SLQRCWSVDSAEGWVVYRGIQLAGQLG---------------RILSPWD----NGKVL-------
              +V+      G G V+R A+GE FM AC+  +   +     E      G++ A  +G                I S  +    +G +L       
Subjt:  KLNIDASVRPDTGEAGGGFVLRGADGEVFMVACL-SLQRCWSVDSAEGWVVYRGIQLAGQLG---------------RILSPWD----NGKVL-------

Query:  ---------FTLRQGNKVAHALARLAFSYVDRV-WLEEWPSEVSDVLRGDVV
                 +T R GNKVAH LA+ AF   + V W+EE PS +  VL  DV+
Subjt:  ---------FTLRQGNKVAHALARLAFSYVDRV-WLEEWPSEVSDVLRGDVV

VVA32947.1 PREDICTED: retrotransposon [Prunus dulcis]

5.5e-125

38.02

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Query:  FLQNPNTGEEAQQYISQVLSVSCCPCHQQYLGLPSFMPRNRSGVLKFVKDHIWHQIQGWKGKFFSVAGKEVLLKSIVQAILCYTMNCFRLPRGLIKEIHR
        F  +PN        I  VL+V    CH++YLGLP+   + R  + + +KD +W  I GWK K  S AGKE+L+K+++QAI  Y+M+CFR+P+GL KE++ 
Subjt:  FLQNPNTGEEAQQYISQVLSVSCCPCHQQYLGLPSFMPRNRSGVLKFVKDHIWHQIQGWKGKFFSVAGKEVLLKSIVQAILCYTMNCFRLPRGLIKEIHR

Query:  TMARFWWNGSEDERRMHWLSWDSLCLPKCLGGLGFRNMELFNQALLAKQCWRVLQDPSSLLGSVLKGRYFPQSGFLEADIGSRPSFVWRSLLWGRELLVR
         MARFWW  ++D+R +HW+ W+ LC  K  GGLGFR++E FNQALLAKQCWR+L+ P SL+  + + RY P   FLEA++G+ PSF+WRSL WG+ELL +
Subjt:  TMARFWWNGSEDERRMHWLSWDSLCLPKCLGGLGFRNMELFNQALLAKQCWRVLQDPSSLLGSVLKGRYFPQSGFLEADIGSRPSFVWRSLLWGRELLVR

Query:  GCRWRIGNGRTTPIYGSNWLPNEFSLQIQSAPVLSPTSTVSELFTASGGWNEALLRTIFNGADCEAFLRIPLRHGSEEDRLIWHFEKHGNFSVKSGYRLA
        G RWR+GNG +  +Y   WLP     +I S P L  ++ V +LFT+SG WN  LL+ IF   + +A L+IPL   +  D LIWH+E++G +SVKSGYRLA
Subjt:  GCRWRIGNGRTTPIYGSNWLPNEFSLQIQSAPVLSPTSTVSELFTASGGWNEALLRTIFNGADCEAFLRIPLRHGSEEDRLIWHFEKHGNFSVKSGYRLA

Query:  QTLAIQDRPGSSNSERVHM---WWSGLWRLNVSNKHKFFLWRLCHDRLPTMVNLLKRGLSVSPLCVLCDDDAEDCLHLFWTCPVVKSMWLGSRFALLHQP
             +D+     S RV +   +W  +W L + NK KFFLWR   D LP    L  R ++ +P+C  C   AE  LH  W C   K +W  S +  + + 
Subjt:  QTLAIQDRPGSSNSERVHM---WWSGLWRLNVSNKHKFFLWRLCHDRLPTMVNLLKRGLSVSPLCVLCDDDAEDCLHLFWTCPVVKSMWLGSRFALLHQP

Query:  FSHLRFEEIIGAMKDKQTGPDFELVVIFWWSVWNLQNSLSSGGQPDGRDLWAYSSDYLSAFHVGGKRCAAGDCSRAQSRDQEERCVWRPPPNRELKLNID
        +    F E+  A++   +G +  L     W +WN +NS    G+ +      +    L+         +     R QS  Q     WRPPP    K+N+D
Subjt:  FSHLRFEEIIGAMKDKQTGPDFELVVIFWWSVWNLQNSLSSGGQPDGRDLWAYSSDYLSAFHVGGKRCAAGDCSRAQSRDQEERCVWRPPPNRELKLNID

Query:  ASVRPDTGEAGGGFVLRGADGEVFMVACL-SLQRCWSVDSAEGWVVYRGIQLAGQLG---------------RILSPWD----NGKVL------------
         +V+      G G V+R A+GE FM AC+  +Q  +     E      G++ A  +G                ILS  +    +G ++            
Subjt:  ASVRPDTGEAGGGFVLRGADGEVFMVACL-SLQRCWSVDSAEGWVVYRGIQLAGQLG---------------RILSPWD----NGKVL------------

Query:  ----FTLRQGNKVAHALARLAFSYVDRV-WLEEWPSEVSDVLRGDVV
            +T R GNKVAH LA+ AF   + V W+EE P  +  VL  DV+
Subjt:  ----FTLRQGNKVAHALARLAFSYVDRV-WLEEWPSEVSDVLRGDVV

XP_008237273.1 PREDICTED: uncharacterized protein LOC103336015 [Prunus mume]

5.8e-106

36.96

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Query:  NPNTGEEAQQYISQVLSVSCCPCHQQYLGLPSFMPRNRSGVLKFVKDHIWHQIQGWKGKFFSVAGKEVLLKSIVQAILCYTMNCFRLPRGLIKEIHRTMA
        +P+T    Q  I Q+L+V+  PCH++YLGLP+ + +++  + + VKD +W+++ GW+GK  S AGKEVL+KS+ QAI  Y+M+ FRLP GL +EI   +A
Subjt:  NPNTGEEAQQYISQVLSVSCCPCHQQYLGLPSFMPRNRSGVLKFVKDHIWHQIQGWKGKFFSVAGKEVLLKSIVQAILCYTMNCFRLPRGLIKEIHRTMA

Query:  RFWWNGSEDERRMHWLSWDSLCLPKCLGGLGFRNMELFNQALLAKQCWRVLQDPSSLLGSVLKGRYFPQSGFLEADIGSRPSFVWRSLLWGRELLVRGCR
        +FWW+   D R +HW  W  +C  K  GGLGFR +  FNQALL KQ WR+L+ P SL+  +LK RYFP S FL A  GS PSF W+SLLWGR+LL  G R
Subjt:  RFWWNGSEDERRMHWLSWDSLCLPKCLGGLGFRNMELFNQALLAKQCWRVLQDPSSLLGSVLKGRYFPQSGFLEADIGSRPSFVWRSLLWGRELLVRGCR

Query:  WRIGNGRTTPIYGSNWLPNEFSLQIQSAPVLSPTSTVSELFTASGGWNEALLRTIFNGADCEAFLRIPLRHGSEEDRLIWHFEKHGNFSVKSGYRLA---
        WRIG+GR   IYG  W+P +    IQS P L  TS V +LFTASGGW+   +   F+  + EA L IPL  G   DR IW+F K+G +SVKSGY  A   
Subjt:  WRIGNGRTTPIYGSNWLPNEFSLQIQSAPVLSPTSTVSELFTASGGWNEALLRTIFNGADCEAFLRIPLRHGSEEDRLIWHFEKHGNFSVKSGYRLA---

Query:  ---QTLAIQDRPGSSNSERVHMWWSGLWRLNVSNKHKFFLWRLCHDRLPTMVNLLKRGLSVSPLCVLCDDDAEDCLHLFWTCPVVKSMWLGSRFALLHQP
           + L+     G S+S      W  LW+L V  K    LWR+  D LP+   L +R ++   +C  C    E  LH    C V   +W    F    + 
Subjt:  ---QTLAIQDRPGSSNSERVHMWWSGLWRLNVSNKHKFFLWRLCHDRLPTMVNLLKRGLSVSPLCVLCDDDAEDCLHLFWTCPVVKSMWLGSRFALLHQP

Query:  FSHLRFEEIIGAMKDKQTG---PDFELVVIFW-WSVWNLQNSLSSGGQPDGRD-LWAYSSDYLSAFHVGGKRCAAGDCSRAQSRDQEERCVWRPPPNREL
        F  L     +G   D       PD + +  F  W +WN +N +  G QP     L   + DY + F    KR +A +     S  ++ +  WRPP     
Subjt:  FSHLRFEEIIGAMKDKQTG---PDFELVVIFW-WSVWNLQNSLSSGGQPDGRD-LWAYSSDYLSAFHVGGKRCAAGDCSRAQSRDQEERCVWRPPPNREL

Query:  KLNIDASVRPDTGEAGGGFVLRGADGEVFMVACL------------------------------------SLQRCWSVDSAEGWVVYRGIQLAGQLGRIL
        KLN+D +   +TG  G G ++R + G +     +                                    SLQ    V+S E  +   G  L   + R+L
Subjt:  KLNIDASVRPDTGEAGGGFVLRGADGEVFMVACL------------------------------------SLQRCWSVDSAEGWVVYRGIQLAGQLGRIL

Query:  SPWDNGKVLFTLRQGNKVAHALARLAFSYVDR---VWLEEWPSEVSDVLRGD
            +  V    RQ NK AH +AR  FS  D+   +WL+  P  + D +  D
Subjt:  SPWDNGKVLFTLRQGNKVAHALARLAFSYVDR---VWLEEWPSEVSDVLRGD

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]

1.6e-148

40.94

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Query:  IGKKRRIDQGFLQNPNTGEEAQQYISQVLSVSCCPCHQQYLGLPSFMPRNRSGVLKFVKDHIWHQIQGWKGKFFSVAGKEVLLKSIVQAILCYTMNCFRL
        I  ++   Q  ++ P   +     I  +LSV+   C  QYLGLP+FMPRNR     ++KD +W  +QGWK K FS+ GKEVL+K++ QAI CYTM+CFRL
Subjt:  IGKKRRIDQGFLQNPNTGEEAQQYISQVLSVSCCPCHQQYLGLPSFMPRNRSGVLKFVKDHIWHQIQGWKGKFFSVAGKEVLLKSIVQAILCYTMNCFRL

Query:  PRGLIKEIHRTMARFWWNGSEDERRMHWLSWDSLCLPKCLGGLGFRNMELFNQALLAKQCWRVLQDPSSLLGSVLKGRYFPQSGFLEADIGSRPSFVWRS
        P+ LI+E H   ARFWW  S++++++HW++W+SL LPKC GG+GFR++ELFN+ALLAKQCWR+L  P+S+L  VLKGRYF    F+EA I   PS++WRS
Subjt:  PRGLIKEIHRTMARFWWNGSEDERRMHWLSWDSLCLPKCLGGLGFRNMELFNQALLAKQCWRVLQDPSSLLGSVLKGRYFPQSGFLEADIGSRPSFVWRS

Query:  LLWGRELLVRGCRWRIGNGRTTPIYGSNWLPNEFSLQIQSAPVLSPTSTVSELFT-ASGGWNEALLRTIFNGADCEAFLRIPLRHGSEEDRLIWHFEKHG
        +LWGR+LL +G RWRIGNG +  IYG NW+PN+ +L+I S+P L   S VS L     GGW   ++R  F   + +  L IP+  G+EEDRLIW++EK G
Subjt:  LLWGRELLVRGCRWRIGNGRTTPIYGSNWLPNEFSLQIQSAPVLSPTSTVSELFT-ASGGWNEALLRTIFNGADCEAFLRIPLRHGSEEDRLIWHFEKHG

Query:  NFSVKSGYRLA--QTLAIQDRPGSSNSERVHMWWSGLWRLNVSNKHKFFLWRLCHDRLPTMVNLLKRGLSVSPLCVLCDDDAEDCLHLFWTCPVVKSMWL
         +SV+SGY++A      +Q  P SS+SE V  WW+G W++++ NK K FLWRLC DRLPT  NL KRG+ ++  C  C  + ED +HLFW C   +++W+
Subjt:  NFSVKSGYRLA--QTLAIQDRPGSSNSERVHMWWSGLWRLNVSNKHKFFLWRLCHDRLPTMVNLLKRGLSVSPLCVLCDDDAEDCLHLFWTCPVVKSMWL

Query:  GSRFALLHQPFSHLRFEEIIGAMKDKQTGPDFELVVIFWWSVWNLQNSLSSGGQPD-----GRDLWAYSSDYLSAFHVGGKRCAAGDCSRAQSRDQEERC
         S+F  L  PF  LR         +  +  DFE + +  W +WN +N+ +           G +L  +++ Y   F         G  +           
Subjt:  GSRFALLHQPFSHLRFEEIIGAMKDKQTGPDFELVVIFWWSVWNLQNSLSSGGQPD-----GRDLWAYSSDYLSAFHVGGKRCAAGDCSRAQSRDQEERC

Query:  VWRPPPNRELKLNIDASVRPDTGEAGGGFVLRGADGEVFMVACLSLQRCWSVDSAEGWVVYRGIQLAGQLG---RILSPWDNGKVL--------------
        +W+PP     K+N DAS       AG G ++    G+V   A   L+   SVD AE      G+QLA ++G    +    + G+++              
Subjt:  VWRPPPNRELKLNIDASVRPDTGEAGGGFVLRGADGEVFMVACLSLQRCWSVDSAEGWVVYRGIQLAGQLG---RILSPWDNGKVL--------------

Query:  --FTLRQGNKVAHALARLAFSYVD-RVWLEEWPSEVSDVL
          F  R+GNK AH LAR A    +  +W+E+WP E+   L
Subjt:  --FTLRQGNKVAHALARLAFSYVD-RVWLEEWPSEVSDVL

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]

2.1e-108

34.46

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Query:  ISQVLSVSCCPCHQQYLGLPSFMPRNRSGVLKFVKDHIWHQIQGWKGKFFSVAGKEVLLKSIVQAILCYTMNCFRLPRGLIKEIHRTMARFWWNGSEDER
        IS++  +     H++YLGLPS + R        VK  + ++I  W+ KFF+  GKEVL+K++ QAI  Y M+ F++P GL ++I + MARFWW   +D +
Subjt:  ISQVLSVSCCPCHQQYLGLPSFMPRNRSGVLKFVKDHIWHQIQGWKGKFFSVAGKEVLLKSIVQAILCYTMNCFRLPRGLIKEIHRTMARFWWNGSEDER

Query:  RMHWLSWDSLCLPKCLGGLGFRNMELFNQALLAKQCWRVLQDPSSLLGSVLKGRYFPQSGFLEADIGSRPSFVWRSLLWGRELLVRGCRWRIGNGRTTPI
         +HW  W+ +   K  GG+GFR++  FNQAL+AKQ WR++Q PSSL+  VLK RYF  +GF+ A +GS+PSFVWRS++WGR++L +G RWRIGNG+   +
Subjt:  RMHWLSWDSLCLPKCLGGLGFRNMELFNQALLAKQCWRVLQDPSSLLGSVLKGRYFPQSGFLEADIGSRPSFVWRSLLWGRELLVRGCRWRIGNGRTTPI

Query:  YGSNWLPNEFSLQIQSAPVLSPTSTVSELFTASGGWNEALLRTIFNGADCEAFLRIPLRHGSEEDRLIWHFEKHGNFSVKSGYRLAQTLAIQDRPGSSNS
        YG+NW+P   + +  SAP +   +TV+EL      W E L+   F   D EA ++IPL    +ED+LIWH++K G +SVKSGY++A  +   + P  SN 
Subjt:  YGSNWLPNEFSLQIQSAPVLSPTSTVSELFTASGGWNEALLRTIFNGADCEAFLRIPLRHGSEEDRLIWHFEKHGNFSVKSGYRLAQTLAIQDRPGSSNS

Query:  ERVHMWWSGLWRLNVSNKHKFFLWRLCHDRLPTMVNLLKRGLSVSPLCVLCDDDAEDCLHLFWTCPVVKSMWLGSRFALLHQPFSHLRFEEIIGAMKDKQ
        ++    W  +W+L +  K K FLWR  HD LPT  NL K+ +   P+C  C    E   H    C   + +W  S  A   +         ++     + 
Subjt:  ERVHMWWSGLWRLNVSNKHKFFLWRLCHDRLPTMVNLLKRGLSVSPLCVLCDDDAEDCLHLFWTCPVVKSMWLGSRFALLHQPFSHLRFEEIIGAMKDKQ

Query:  TGPDFELVVIFWWSVWNLQNS-LSSGGQPDGRDLWAYSSDYLSAFHVGGKRCAAGDCSRAQSRDQEERCVWRPPPNRELKLNIDASVRPDTGEAGGGFVL
           +   V    W++W  +N  L  G + +   + A +   + +F    K+    +       + E +  W PPPN   K+N+DA+V  +   AG G V+
Subjt:  TGPDFELVVIFWWSVWNLQNS-LSSGGQPDGRDLWAYSSDYLSAFHVGGKRCAAGDCSRAQSRDQEERCVWRPPPNRELKLNIDASVRPDTGEAGGGFVL

Query:  RGADGEVFMVACLSLQRCWSVDSAEGWVVYRGIQLA----------------------------GQLGRILSP-------WDNGKVLFTLRQGNKVAHAL
        R +DG     A  SL+   SV  AE   +  G+++A                             ++G ++S        + N K   + R  N  AH+L
Subjt:  RGADGEVFMVACLSLQRCWSVDSAEGWVVYRGIQLA----------------------------GQLGRILSP-------WDNGKVLFTLRQGNKVAHAL

Query:  ARLAFSYVDRV-WLEEWPSEV
        A+LA    + V WL+E P E+
Subjt:  ARLAFSYVDRV-WLEEWPSEV

TrEMBL top hits

e value

%identity

Alignment

A0A251NPF0 Reverse transcriptase domain-containing protein

2.2e-119

37.42

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Query:  NPNTGEEAQQYISQVLSVSCCPCHQQYLGLPSFMPRNRSGVLKFVKDHIWHQIQGWKGKFFSVAGKEVLLKSIVQAILCYTMNCFRLPRGLIKEIHRTMA
        +PN        I  VL+V    CH+ YLGLP+   + R  + + +KD +W  I GWK K  S AGKE+L+K+++QAI  Y+M+CFR+P+GL KE++  MA
Subjt:  NPNTGEEAQQYISQVLSVSCCPCHQQYLGLPSFMPRNRSGVLKFVKDHIWHQIQGWKGKFFSVAGKEVLLKSIVQAILCYTMNCFRLPRGLIKEIHRTMA

Query:  RFWWNGSEDERRMHWLSWDSLCLPKCLGGLGFRNMELFNQALLAKQCWRVLQDPSSLLGSVLKGRYFPQSGFLEADIGSRPSFVWRSLLWGRELLVRGCR
        RFWW  ++D+R +HW+ W+ LC  K  GGLGFR++E FNQALLAKQCWR+L+ P SL+  + + RY P   FLEA++G+ PSF+WRSL WG+ELL +G R
Subjt:  RFWWNGSEDERRMHWLSWDSLCLPKCLGGLGFRNMELFNQALLAKQCWRVLQDPSSLLGSVLKGRYFPQSGFLEADIGSRPSFVWRSLLWGRELLVRGCR

Query:  WRIGNGRTTPIYGSNWLPNEFSLQIQSAPVLSPTSTVSELFTASGGWNEALLRTIFNGADCEAFLRIPLRHGSEEDRLIWHFEKHGNFSVKSGYRLAQTL
        WR+G+G +  +Y   WLP     +I S P L  ++ V +LFT+SG WN  LL+ IF   + +A L+IPL   +  D LIWH+E++G +SVKSGYRLA   
Subjt:  WRIGNGRTTPIYGSNWLPNEFSLQIQSAPVLSPTSTVSELFTASGGWNEALLRTIFNGADCEAFLRIPLRHGSEEDRLIWHFEKHGNFSVKSGYRLAQTL

Query:  AIQDRPGSSNSERVHM---WWSGLWRLNVSNKHKFFLWRLCHDRLPTMVNLLKRGLSVSPLCVLCDDDAEDCLHLFWTCPVVKSMWLGSRFALLHQPFSH
          +D+     S RV +   +W  +W L + NK KFFLWR   D LP    L  R ++ +P+C  C   AE  LH  W C   K +W  S +  + + +  
Subjt:  AIQDRPGSSNSERVHM---WWSGLWRLNVSNKHKFFLWRLCHDRLPTMVNLLKRGLSVSPLCVLCDDDAEDCLHLFWTCPVVKSMWLGSRFALLHQPFSH

Query:  LRFEEIIGAMKDKQTGPDFELVVIFWWSVWNLQNSLSSGGQPDG--------RDLWAYSSDYLSAFHVGGKRCAAGDCSRAQSRDQEERCVWRPPPNREL
          F E+  A++   +G +  L     W +WN +NS    G+ +           L    SD  +  H    R         QS  Q     WRPPP    
Subjt:  LRFEEIIGAMKDKQTGPDFELVVIFWWSVWNLQNSLSSGGQPDG--------RDLWAYSSDYLSAFHVGGKRCAAGDCSRAQSRDQEERCVWRPPPNREL

Query:  KLNIDASVRPDTGEAGGGFVLRGADGEVFMVACL-SLQRCWSVDSAEGWVVYRGIQLAGQLG---------------RILSPWD----NGKVL-------
              +V+      G G V+R A+GE FM AC+  +   +     E      G++ A  +G                I S  +    +G +L       
Subjt:  KLNIDASVRPDTGEAGGGFVLRGADGEVFMVACL-SLQRCWSVDSAEGWVVYRGIQLAGQLG---------------RILSPWD----NGKVL-------

Query:  ---------FTLRQGNKVAHALARLAFSYVDRV-WLEEWPSEVSDVLRGDVV
                 +T R GNKVAH LA+ AF   + V W+EE PS +  VL  DV+
Subjt:  ---------FTLRQGNKVAHALARLAFSYVDRV-WLEEWPSEVSDVLRGDVV

A0A5E4FZN9 PREDICTED: retrotransposon

2.7e-125

38.02

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Query:  FLQNPNTGEEAQQYISQVLSVSCCPCHQQYLGLPSFMPRNRSGVLKFVKDHIWHQIQGWKGKFFSVAGKEVLLKSIVQAILCYTMNCFRLPRGLIKEIHR
        F  +PN        I  VL+V    CH++YLGLP+   + R  + + +KD +W  I GWK K  S AGKE+L+K+++QAI  Y+M+CFR+P+GL KE++ 
Subjt:  FLQNPNTGEEAQQYISQVLSVSCCPCHQQYLGLPSFMPRNRSGVLKFVKDHIWHQIQGWKGKFFSVAGKEVLLKSIVQAILCYTMNCFRLPRGLIKEIHR

Query:  TMARFWWNGSEDERRMHWLSWDSLCLPKCLGGLGFRNMELFNQALLAKQCWRVLQDPSSLLGSVLKGRYFPQSGFLEADIGSRPSFVWRSLLWGRELLVR
         MARFWW  ++D+R +HW+ W+ LC  K  GGLGFR++E FNQALLAKQCWR+L+ P SL+  + + RY P   FLEA++G+ PSF+WRSL WG+ELL +
Subjt:  TMARFWWNGSEDERRMHWLSWDSLCLPKCLGGLGFRNMELFNQALLAKQCWRVLQDPSSLLGSVLKGRYFPQSGFLEADIGSRPSFVWRSLLWGRELLVR

Query:  GCRWRIGNGRTTPIYGSNWLPNEFSLQIQSAPVLSPTSTVSELFTASGGWNEALLRTIFNGADCEAFLRIPLRHGSEEDRLIWHFEKHGNFSVKSGYRLA
        G RWR+GNG +  +Y   WLP     +I S P L  ++ V +LFT+SG WN  LL+ IF   + +A L+IPL   +  D LIWH+E++G +SVKSGYRLA
Subjt:  GCRWRIGNGRTTPIYGSNWLPNEFSLQIQSAPVLSPTSTVSELFTASGGWNEALLRTIFNGADCEAFLRIPLRHGSEEDRLIWHFEKHGNFSVKSGYRLA

Query:  QTLAIQDRPGSSNSERVHM---WWSGLWRLNVSNKHKFFLWRLCHDRLPTMVNLLKRGLSVSPLCVLCDDDAEDCLHLFWTCPVVKSMWLGSRFALLHQP
             +D+     S RV +   +W  +W L + NK KFFLWR   D LP    L  R ++ +P+C  C   AE  LH  W C   K +W  S +  + + 
Subjt:  QTLAIQDRPGSSNSERVHM---WWSGLWRLNVSNKHKFFLWRLCHDRLPTMVNLLKRGLSVSPLCVLCDDDAEDCLHLFWTCPVVKSMWLGSRFALLHQP

Query:  FSHLRFEEIIGAMKDKQTGPDFELVVIFWWSVWNLQNSLSSGGQPDGRDLWAYSSDYLSAFHVGGKRCAAGDCSRAQSRDQEERCVWRPPPNRELKLNID
        +    F E+  A++   +G +  L     W +WN +NS    G+ +      +    L+         +     R QS  Q     WRPPP    K+N+D
Subjt:  FSHLRFEEIIGAMKDKQTGPDFELVVIFWWSVWNLQNSLSSGGQPDGRDLWAYSSDYLSAFHVGGKRCAAGDCSRAQSRDQEERCVWRPPPNRELKLNID

Query:  ASVRPDTGEAGGGFVLRGADGEVFMVACL-SLQRCWSVDSAEGWVVYRGIQLAGQLG---------------RILSPWD----NGKVL------------
         +V+      G G V+R A+GE FM AC+  +Q  +     E      G++ A  +G                ILS  +    +G ++            
Subjt:  ASVRPDTGEAGGGFVLRGADGEVFMVACL-SLQRCWSVDSAEGWVVYRGIQLAGQLG---------------RILSPWD----NGKVL------------

Query:  ----FTLRQGNKVAHALARLAFSYVDRV-WLEEWPSEVSDVLRGDVV
            +T R GNKVAH LA+ AF   + V W+EE P  +  VL  DV+
Subjt:  ----FTLRQGNKVAHALARLAFSYVDRV-WLEEWPSEVSDVLRGDVV

A0A6J1DAR4 uncharacterized protein LOC111018954

7.8e-149

40.94

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Query:  IGKKRRIDQGFLQNPNTGEEAQQYISQVLSVSCCPCHQQYLGLPSFMPRNRSGVLKFVKDHIWHQIQGWKGKFFSVAGKEVLLKSIVQAILCYTMNCFRL
        I  ++   Q  ++ P   +     I  +LSV+   C  QYLGLP+FMPRNR     ++KD +W  +QGWK K FS+ GKEVL+K++ QAI CYTM+CFRL
Subjt:  IGKKRRIDQGFLQNPNTGEEAQQYISQVLSVSCCPCHQQYLGLPSFMPRNRSGVLKFVKDHIWHQIQGWKGKFFSVAGKEVLLKSIVQAILCYTMNCFRL

Query:  PRGLIKEIHRTMARFWWNGSEDERRMHWLSWDSLCLPKCLGGLGFRNMELFNQALLAKQCWRVLQDPSSLLGSVLKGRYFPQSGFLEADIGSRPSFVWRS
        P+ LI+E H   ARFWW  S++++++HW++W+SL LPKC GG+GFR++ELFN+ALLAKQCWR+L  P+S+L  VLKGRYF    F+EA I   PS++WRS
Subjt:  PRGLIKEIHRTMARFWWNGSEDERRMHWLSWDSLCLPKCLGGLGFRNMELFNQALLAKQCWRVLQDPSSLLGSVLKGRYFPQSGFLEADIGSRPSFVWRS

Query:  LLWGRELLVRGCRWRIGNGRTTPIYGSNWLPNEFSLQIQSAPVLSPTSTVSELFT-ASGGWNEALLRTIFNGADCEAFLRIPLRHGSEEDRLIWHFEKHG
        +LWGR+LL +G RWRIGNG +  IYG NW+PN+ +L+I S+P L   S VS L     GGW   ++R  F   + +  L IP+  G+EEDRLIW++EK G
Subjt:  LLWGRELLVRGCRWRIGNGRTTPIYGSNWLPNEFSLQIQSAPVLSPTSTVSELFT-ASGGWNEALLRTIFNGADCEAFLRIPLRHGSEEDRLIWHFEKHG

Query:  NFSVKSGYRLA--QTLAIQDRPGSSNSERVHMWWSGLWRLNVSNKHKFFLWRLCHDRLPTMVNLLKRGLSVSPLCVLCDDDAEDCLHLFWTCPVVKSMWL
         +SV+SGY++A      +Q  P SS+SE V  WW+G W++++ NK K FLWRLC DRLPT  NL KRG+ ++  C  C  + ED +HLFW C   +++W+
Subjt:  NFSVKSGYRLA--QTLAIQDRPGSSNSERVHMWWSGLWRLNVSNKHKFFLWRLCHDRLPTMVNLLKRGLSVSPLCVLCDDDAEDCLHLFWTCPVVKSMWL

Query:  GSRFALLHQPFSHLRFEEIIGAMKDKQTGPDFELVVIFWWSVWNLQNSLSSGGQPD-----GRDLWAYSSDYLSAFHVGGKRCAAGDCSRAQSRDQEERC
         S+F  L  PF  LR         +  +  DFE + +  W +WN +N+ +           G +L  +++ Y   F         G  +           
Subjt:  GSRFALLHQPFSHLRFEEIIGAMKDKQTGPDFELVVIFWWSVWNLQNSLSSGGQPD-----GRDLWAYSSDYLSAFHVGGKRCAAGDCSRAQSRDQEERC

Query:  VWRPPPNRELKLNIDASVRPDTGEAGGGFVLRGADGEVFMVACLSLQRCWSVDSAEGWVVYRGIQLAGQLG---RILSPWDNGKVL--------------
        +W+PP     K+N DAS       AG G ++    G+V   A   L+   SVD AE      G+QLA ++G    +    + G+++              
Subjt:  VWRPPPNRELKLNIDASVRPDTGEAGGGFVLRGADGEVFMVACLSLQRCWSVDSAEGWVVYRGIQLAGQLG---RILSPWDNGKVL--------------

Query:  --FTLRQGNKVAHALARLAFSYVD-RVWLEEWPSEVSDVL
          F  R+GNK AH LAR A    +  +W+E+WP E+   L
Subjt:  --FTLRQGNKVAHALARLAFSYVD-RVWLEEWPSEVSDVL

A0A803QQT2 Uncharacterized protein

2.7e-117

35.56

Show/hide

Query:  NTGEEAQQYISQVLSVSCCPCHQQYLGLPSFMPRNRSGVLKFVKDHIWHQIQGWKGKFFSVAGKEVLLKSIVQAILCYTMNCFRLPRGLIKEIHRTMARF
        N   E +  ++ +L V     H +YLGLPSF+ RN+   L  +K+ +W +++GWK   FSVAGKEVL+K IVQAI  YTM+CF+LP+  I  +HR  +RF
Subjt:  NTGEEAQQYISQVLSVSCCPCHQQYLGLPSFMPRNRSGVLKFVKDHIWHQIQGWKGKFFSVAGKEVLLKSIVQAILCYTMNCFRLPRGLIKEIHRTMARF

Query:  WWNGSEDERRMHWLSWDSLCLPKCLGGLGFRNMELFNQALLAKQCWRVLQDPSSLLGSVLKGRYFPQSGFLEADIGSRPSFVWRSLLWGRELLVRGCRWR
        WW   + E+++HW  W  LC PK  GGLGFR++ +FNQALLAKQ WR L+ P  L   VLK  YFP+ G LEA  G+  SFVWRSL+WG++L+++G RWR
Subjt:  WWNGSEDERRMHWLSWDSLCLPKCLGGLGFRNMELFNQALLAKQCWRVLQDPSSLLGSVLKGRYFPQSGFLEADIGSRPSFVWRSLLWGRELLVRGCRWR

Query:  IGNGRTTPIYGSNWLPNEFSLQIQSAPVLSPTSTVSELFTASGGWNEALLRTIFNGADCEAFLRIPLRHGSEEDRLIWHFEKHGNFSVKSGYRLAQTLAI
        +GNG +  +    WLP   + ++   P L     V++L  A G W+E  +R+IFN  D +  L IP      ED+++WH+ K+G +SVKSGYR+A +   
Subjt:  IGNGRTTPIYGSNWLPNEFSLQIQSAPVLSPTSTVSELFTASGGWNEALLRTIFNGADCEAFLRIPLRHGSEEDRLIWHFEKHGNFSVKSGYRLAQTLAI

Query:  QDRPGSSNSERVHMWWSGLWRLNVSNKHKFFLWRLCHDRLPTMVNLLKRGLSVSPLCVLCDDDAEDCL-HLFWTCPVVKSMWLGSRFALLHQPFSHLRFE
        +     SN   +  WW  LWRL +  K K F+W++ H+ LP  VNL KRG++ S +C  C    ++ + H  W C   K  W   R + L+     +  E
Subjt:  QDRPGSSNSERVHMWWSGLWRLNVSNKHKFFLWRLCHDRLPTMVNLLKRGLSVSPLCVLCDDDAEDCL-HLFWTCPVVKSMWLGSRFALLHQPFSHLRFE

Query:  E------IIGAMKDKQTGPDFELVVIFWWSVWNLQNSLSSGG-QPDGRDLWAYSSDYLSAFHVGGKRCAAGDCSRAQSRDQEERCVWRPPPNRELKLNID
        +       I A  DK+     E  ++  W++WN++N++  GG  P   ++  +  ++L+ F         GD  R +S+   E   W PP   ++ +N+D
Subjt:  E------IIGAMKDKQTGPDFELVVIFWWSVWNLQNSLSSGG-QPDGRDLWAYSSDYLSAFHVGGKRCAAGDCSRAQSRDQEERCVWRPPPNRELKLNID

Query:  ASVRPDTGEAGGGFVLRGADGEVFMVACLSLQRCWSVDSAEGWVVYRGIQL--------------AGQLGRILSPWDNG---------------------
        A V+     +G G+V+R A G V   A   LQ+       E   + +GIQ+                Q   ++   +NG                     
Subjt:  ASVRPDTGEAGGGFVLRGADGEVFMVACLSLQRCWSVDSAEGWVVYRGIQL--------------AGQLGRILSPWDNG---------------------

Query:  KVLFTLRQGNKVAHALARLAFSY-VDRVWL
         + F  R+ N+VAHALA  A  +    +W+
Subjt:  KVLFTLRQGNKVAHALARLAFSY-VDRVWL

M5W5F3 Reverse transcriptase domain-containing protein (Fragment)

2.2e-119

37.42

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Query:  NPNTGEEAQQYISQVLSVSCCPCHQQYLGLPSFMPRNRSGVLKFVKDHIWHQIQGWKGKFFSVAGKEVLLKSIVQAILCYTMNCFRLPRGLIKEIHRTMA
        +PN        I  VL+V    CH+ YLGLP+   + R  + + +KD +W  I GWK K  S AGKE+L+K+++QAI  Y+M+CFR+P+GL KE++  MA
Subjt:  NPNTGEEAQQYISQVLSVSCCPCHQQYLGLPSFMPRNRSGVLKFVKDHIWHQIQGWKGKFFSVAGKEVLLKSIVQAILCYTMNCFRLPRGLIKEIHRTMA

Query:  RFWWNGSEDERRMHWLSWDSLCLPKCLGGLGFRNMELFNQALLAKQCWRVLQDPSSLLGSVLKGRYFPQSGFLEADIGSRPSFVWRSLLWGRELLVRGCR
        RFWW  ++D+R +HW+ W+ LC  K  GGLGFR++E FNQALLAKQCWR+L+ P SL+  + + RY P   FLEA++G+ PSF+WRSL WG+ELL +G R
Subjt:  RFWWNGSEDERRMHWLSWDSLCLPKCLGGLGFRNMELFNQALLAKQCWRVLQDPSSLLGSVLKGRYFPQSGFLEADIGSRPSFVWRSLLWGRELLVRGCR

Query:  WRIGNGRTTPIYGSNWLPNEFSLQIQSAPVLSPTSTVSELFTASGGWNEALLRTIFNGADCEAFLRIPLRHGSEEDRLIWHFEKHGNFSVKSGYRLAQTL
        WR+G+G +  +Y   WLP     +I S P L  ++ V +LFT+SG WN  LL+ IF   + +A L+IPL   +  D LIWH+E++G +SVKSGYRLA   
Subjt:  WRIGNGRTTPIYGSNWLPNEFSLQIQSAPVLSPTSTVSELFTASGGWNEALLRTIFNGADCEAFLRIPLRHGSEEDRLIWHFEKHGNFSVKSGYRLAQTL

Query:  AIQDRPGSSNSERVHM---WWSGLWRLNVSNKHKFFLWRLCHDRLPTMVNLLKRGLSVSPLCVLCDDDAEDCLHLFWTCPVVKSMWLGSRFALLHQPFSH
          +D+     S RV +   +W  +W L + NK KFFLWR   D LP    L  R ++ +P+C  C   AE  LH  W C   K +W  S +  + + +  
Subjt:  AIQDRPGSSNSERVHM---WWSGLWRLNVSNKHKFFLWRLCHDRLPTMVNLLKRGLSVSPLCVLCDDDAEDCLHLFWTCPVVKSMWLGSRFALLHQPFSH

Query:  LRFEEIIGAMKDKQTGPDFELVVIFWWSVWNLQNSLSSGGQPDG--------RDLWAYSSDYLSAFHVGGKRCAAGDCSRAQSRDQEERCVWRPPPNREL
          F E+  A++   +G +  L     W +WN +NS    G+ +           L    SD  +  H    R         QS  Q     WRPPP    
Subjt:  LRFEEIIGAMKDKQTGPDFELVVIFWWSVWNLQNSLSSGGQPDG--------RDLWAYSSDYLSAFHVGGKRCAAGDCSRAQSRDQEERCVWRPPPNREL

Query:  KLNIDASVRPDTGEAGGGFVLRGADGEVFMVACL-SLQRCWSVDSAEGWVVYRGIQLAGQLG---------------RILSPWD----NGKVL-------
              +V+      G G V+R A+GE FM AC+  +   +     E      G++ A  +G                I S  +    +G +L       
Subjt:  KLNIDASVRPDTGEAGGGFVLRGADGEVFMVACL-SLQRCWSVDSAEGWVVYRGIQLAGQLG---------------RILSPWD----NGKVL-------

Query:  ---------FTLRQGNKVAHALARLAFSYVDRV-WLEEWPSEVSDVLRGDVV
                 +T R GNKVAH LA+ AF   + V W+EE PS +  VL  DV+
Subjt:  ---------FTLRQGNKVAHALARLAFSYVDRV-WLEEWPSEVSDVLRGDVV

SwissProt top hits

e value

%identity

Alignment

P0C2F6 Putative ribonuclease H protein At1g65750

6.7e-49

25.26

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Query:  LPSFMPRNRSGVLKFVKDHIWHQIQGWKGKFFSVAGKEVLLKSIVQAILCYTMNCFRLPRGLIKEIHRTMARFWWNGSEDERRMHWLSWDSLCLPKCLGG
        +P    R        + + +  ++ GW+ K  S AG+  L K+++ ++  ++M+   LP+ ++  + +    F W  + ++++ H + W  +C PK  GG
Subjt:  LPSFMPRNRSGVLKFVKDHIWHQIQGWKGKFFSVAGKEVLLKSIVQAILCYTMNCFRLPRGLIKEIHRTMARFWWNGSEDERRMHWLSWDSLCLPKCLGG

Query:  LGFRNMELFNQALLAKQCWRVLQDPSSLLGSVLKGRYFPQSGFLEADIGSRP----SFVWRSLLWG-RELLVRGCRWRIGNGRTTPIYGSNWLPNEFSLQ
        LG R  +  N+AL++K  WR+LQ+ +SL   VL+ +Y    G +       P    S  WRS+  G R+++  G  W  G+G+    +   W+  +  L+
Subjt:  LGFRNMELFNQALLAKQCWRVLQDPSSLLGSVLKGRYFPQSGFLEADIGSRP----SFVWRSLLWG-RELLVRGCRWRIGNGRTTPIYGSNWLPNEFSLQ

Query:  IQSA--PVLSPTSTVSELFTASGGWNEALLRT-IFNGADCEAFLRIPLRHGSEEDRLIWHFEKHGNFSVKSGYRLAQTLAIQDRPGSSNSERVHMWWSGL
        + +   P    T    +L+    GW+ A +     N    E    +        DRL W F + G FSV+S Y +   L + + P  + +     +++ L
Subjt:  IQSA--PVLSPTSTVSELFTASGGWNEALLRT-IFNGADCEAFLRIPLRHGSEEDRLIWHFEKHGNFSVKSGYRLAQTLAIQDRPGSSNSERVHMWWSGL

Query:  WRLNVSNKHKFFLWRLCHDRLPTMVNLLKRGLSVSPLCVLCDDDAEDCLHLFWTCPVVKSMWLGSRFALLHQP-FSHLRFEEIIGAMKDKQTGPDFE---
        W++ V  + K FLW + +  + T     +R LS S +C +C    E  LH+   CP    +W+        Q  FS   FE +   + D+    D     
Subjt:  WRLNVSNKHKFFLWRLCHDRLPTMVNLLKRGLSVSPLCVLCDDDAEDCLHLFWTCPVVKSMWLGSRFALLHQP-FSHLRFEEIIGAMKDKQTGPDFE---

Query:  -LVVIFWWSVWNLQNSLSSGGQPDGRDLWAYSSDYLSAFHVGGKRCAAGDCSRAQSRDQEERCV-WRPPPNRELKLNIDASVRPDTGEAGGGFVLRGADG
           VI WW  W  +     G     RD   +  ++    +    R  +G+     ++ + ER + W  P    +K+N D + R + G A  G VLR   G
Subjt:  -LVVIFWWSVWNLQNSLSSGGQPDGRDLWAYSSDYLSAFHVGGKRCAAGDCSRAQSRDQEERCV-WRPPPNRELKLNIDASVRPDTGEAGGGFVLRGADG

Query:  EVFMVACLSLQRCWSVDSAEGWVVYRGIQLAGQ--LGRILSPWDNGKVLFTLRQGNKVAHALA---RLAFSYVDRVWL
               L++ RC S   AE W VY G+  A +  + R+    D+  ++  L+ G   +H L+   RL   ++ + WL
Subjt:  EVFMVACLSLQRCWSVDSAEGWVVYRGIQLAGQ--LGRILSPWDNGKVLFTLRQGNKVAHALA---RLAFSYVDRVWL

P93295 Uncharacterized mitochondrial protein AtMg00310

4.2e-35

44.97

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Query:  AILCYTMNCFRLPRGLIKEIHRTMARFWWNGSEDERRMHWLSWDSLCLPK-CLGGLGFRNMELFNQALLAKQCWRVLQDPSSLLGSVLKGRYFPQSGFLE
        A+  Y M+CFRL + L K++   M  FWW+  E++R++ W++W  LC  K   GGLGFR++  FNQALLAKQ +R++  P +LL  +L+ RYFP S  +E
Subjt:  AILCYTMNCFRLPRGLIKEIHRTMARFWWNGSEDERRMHWLSWDSLCLPK-CLGGLGFRNMELFNQALLAKQCWRVLQDPSSLLGSVLKGRYFPQSGFLE

Query:  ADIGSRPSFVWRSLLWGRELLVRGCRWRIGNGRTTPIYGSNWLPNEFSL
          +G+RPS+ WRS++ GRELL RG    IG+G  T ++   W+ +E  L
Subjt:  ADIGSRPSFVWRSLLWGRELLVRGCRWRIGNGRTTPIYGSNWLPNEFSL

Arabidopsis top hits

e value

%identity

Alignment

AT2G02650.1 Ribonuclease H-like superfamily protein

1.7e-15

23.92

Show/hide

Query:  VKSGYRLA------QTLAIQDRPGSSNSERVHMWWSGLWRLNVSNKHKFFLWRLCHDRLPTMVNLLKRGLSVSPLCVLCDDDAEDCLHLFWTCPVVKSMW
        ++SGY +A      +  AIQ  PGS+  ++       +W+L+V+ K K FLWR     L T   L  R +   P+C  C  + E   H+ + CP  +S+W
Subjt:  VKSGYRLA------QTLAIQDRPGSSNSERVHMWWSGLWRLNVSNKHKFFLWRLCHDRLPTMVNLLKRGLSVSPLCVLCDDDAEDCLHLFWTCPVVKSMW

Query:  LGSRFALLHQPFSHLRFEEIIG---AMKDKQTGPDFELVVIFW--WSVWNLQNSLSSGGQPDGRDLWAY-----SSDYLSAFHV--GGKRCAAGDCSRAQ
          +   + +Q      FE+ +     +   QT    +  + FW  W +W  +N      +    D  A      ++++L+A           A +  +  
Subjt:  LGSRFALLHQPFSHLRFEEIIG---AMKDKQTGPDFELVVIFW--WSVWNLQNSLSSGGQPDGRDLWAY-----SSDYLSAFHV--GGKRCAAGDCSRAQ

Query:  SRDQEERCVWRPPPNRELKLNIDASVRPDTGEAGGGFVLRGADGEVFMVACLSLQ
         RD  +   W PPP   +K N D+     +     G+ +R  +G + +     LQ
Subjt:  SRDQEERCVWRPPPNRELKLNIDASVRPDTGEAGGGFVLRGADGEVFMVACLSLQ

AT3G09510.1 Ribonuclease H-like superfamily protein

2.0e-32

25.37

Show/hide

Query:  LKGRYFPQSGFLEADIGSRPSFVWRSLLWGRELLVRGCRWRIGNGRTTPIYGSNWLPNEFSLQIQSAPVLSPTSTVSELFTASGG---WNEALLRTIFNG
        +K RYF     L+A +  + S+ W SLL G  LL +G R  IG+G+   I   N + +     + +        T++ LF   G    W+++ +    + 
Subjt:  LKGRYFPQSGFLEADIGSRPSFVWRSLLWGRELLVRGCRWRIGNGRTTPIYGSNWLPNEFSLQIQSAPVLSPTSTVSELFTASGG---WNEALLRTIFNG

Query:  ADCEAFLRIPLRHGSEEDRLIWHFEKHGNFSVKSGYRLAQTLAIQDRPGSSNSERVHMWWSGLWRLNVSNKHKFFLWRLCHDRLPTMVNLLKRGLSVSPL
        +D     RI L    + D++IW++   G ++V+SGY L       + P  +         + +W L +  K K FLWR     L T   L  RG+ + P 
Subjt:  ADCEAFLRIPLRHGSEEDRLIWHFEKHGNFSVKSGYRLAQTLAIQDRPGSSNSERVHMWWSGLWRLNVSNKHKFFLWRLCHDRLPTMVNLLKRGLSVSPL

Query:  CVLCDDDAEDCLHLFWTCPVVKSMWLGSRFALLHQPFSHLRFEE----IIGAMKDKQTGPDFELVVIFW--WSVWNLQNSLSSGGQPDGRDLWAYSS---
        C  C  + E   H  +TCP     W  S  +L+        FEE    I+  ++D  T  DF  ++  W  W +W  +N++      +       S+   
Subjt:  CVLCDDDAEDCLHLFWTCPVVKSMWLGSRFALLHQPFSHLRFEE----IIGAMKDKQTGPDFELVVIFW--WSVWNLQNSLSSGGQPDGRDLWAYSS---

Query:  --DYLSAFHVGGKRCAAGDCSRAQSRDQEERCVWRPPPNRELKLNIDASVRPDTGEAGGGFVLRGADG-----------------EVFMVACL-SLQRCW
          D+L+A     K            +  E +  WR PP   +K N DA       EA GG+++R   G                 E    A L +LQ+ W
Subjt:  --DYLSAFHVGGKRCAAGDCSRAQSRDQEERCVWRPPPNRELKLNIDASVRPDTGEAGGGFVLRGADG-----------------EVFMVACL-SLQRCW

Query:  SVDSAEGWV---------VYRGIQLAGQLGRIL---SPWDNG----KVLFTLRQGNKVAHALARLAFSY
             + ++         +  GI     L   L   S W N     +  F  R+GNK+AH LA+   +Y
Subjt:  SVDSAEGWV---------VYRGIQLAGQLGRIL---SPWDNG----KVLFTLRQGNKVAHALARLAFSY

AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein

2.9e-23

25.48

Show/hide

Query:  QYLGLPSFMPRNRSGVLKFVKDHIWHQIQGWKGKFFSVAGKEVLLKSIVQAILCYTMNCFRLPRGLIKEIHRTMARFWWNGSEDERRMHWLSWDSLCLPK
        +YLGLP    +  +     + + I  +I  W  +  S AG+  L+ S++ ++  + M+ FRLP   IKEI    + F W+G E   +   ++W  +C PK
Subjt:  QYLGLPSFMPRNRSGVLKFVKDHIWHQIQGWKGKFFSVAGKEVLLKSIVQAILCYTMNCFRLPRGLIKEIHRTMARFWWNGSEDERRMHWLSWDSLCLPK

Query:  CLGGLGFRNMELFNQALLAKQCWRVLQDPSSLLGSVLKGRYFPQSGFLEADIGSRPSFVWRSLLWGRELLVRGCRWRIGNGRTTPIYGSNWLPNEFSLQI
          GGLG R+++  N                       KG ++  SG     +G   S++W+ +L  R L     +  I NG  T  +  NW     S   
Subjt:  CLGGLGFRNMELFNQALLAKQCWRVLQDPSSLLGSVLKGRYFPQSGFLEADIGSRPSFVWRSLLWGRELLVRGCRWRIGNGRTTPIYGSNWLPNEFSLQI

Query:  QSAPVLSPTSTVSELFTASGGWNEALLRTIFNGADCEAFLRI-----PLRH---GSEEDRLIWHFEKHGNFSV-KSGYRLAQTLAIQDRPGSSNSERVHM
        +   V      +    T      EA++         +  LRI      +RH    S ED + W     GN  + K  +   +T A    P    +     
Subjt:  QSAPVLSPTSTVSELFTASGGWNEALLRTIFNGADCEAFLRI-----PLRH---GSEEDRLIWHFEKHGNFSV-KSGYRLAQTLAIQDRPGSSNSERVHM

Query:  WWSGLWRLNVSNKHKFFLWRLCHDRLPTMVNLLKRGLSVSPLCVLCDDDAEDCLHLFWTCP
        W+ G+W  + + K+    W    +RL T   +L         CVLC    E   HLF+TCP
Subjt:  WWSGLWRLNVSNKHKFFLWRLCHDRLPTMVNLLKRGLSVSPLCVLCDDDAEDCLHLFWTCP

AT4G29090.1 Ribonuclease H-like superfamily protein

3.6e-66

29.77

Show/hide

Query:  AILCYTMNCFRLPRGLIKEIHRTMARFWWNGSEDERRMHWLSWDSLCLPKCLGGLGFRNMELFNQALLAKQCWRVLQDPSSLLGSVLKGRYFPQSGFLEA
        A+  YTM CF LP+ + K+I   +A FWW   ++ + MHW +WD L   K  GG+GF+++E FN ALL KQ WR+L  P SL+  V K RYF +S  L A
Subjt:  AILCYTMNCFRLPRGLIKEIHRTMARFWWNGSEDERRMHWLSWDSLCLPKCLGGLGFRNMELFNQALLAKQCWRVLQDPSSLLGSVLKGRYFPQSGFLEA

Query:  DIGSRPSFVWRSLLWGRELLVRGCRWRIGNGRTTPIYGSNWL---PNEFSLQIQSAP-----VLSPTSTVSELFTASG-GWNEALLRTIFNGADCEAFLR
         +GSRPSFVW+S+   +E+L +G R  +GNG    I+   WL   P   +L++Q  P      +S    VS+L   SG  W + ++  +F   + E  L 
Subjt:  DIGSRPSFVWRSLLWGRELLVRGCRWRIGNGRTTPIYGSNWL---PNEFSLQIQSAP-----VLSPTSTVSELFTASG-GWNEALLRTIFNGADCEAFLR

Query:  IPLRHGSEE--DRLIWHFEKHGNFSVKSGY-RLAQTLAIQDRPGSSNSERVHMWWSGLWRLNVSNKHKFFLWRLCHDRLPTMVNLLKRGLSVSPLCVLCD
          LR G     D   W +   G+++VKSGY  L Q +  +  P   +   ++  +  +W+   S K + FLW+   + LP    L  R LS    C+ C 
Subjt:  IPLRHGSEE--DRLIWHFEKHGNFSVKSGY-RLAQTLAIQDRPGSSNSERVHMWWSGLWRLNVSNKHKFFLWRLCHDRLPTMVNLLKRGLSVSPLCVLCD

Query:  DDAEDCLHLFWTCPVVKSMWLGSRFAL-LHQPFSHLRFEEIIGAMKDKQTGPDFE----LVVIFWWSVWNLQNSLSSGGQP-DGRDLWAYSSDYLSAFHV
           E   HL + C   +  W  S   + L   ++   +  +          P +E    LV    W +W  +N L   G+  + +++   + D L  + +
Subjt:  DDAEDCLHLFWTCPVVKSMWLGSRFAL-LHQPFSHLRFEEIIGAMKDKQTGPDFE----LVVIFWWSVWNLQNSLSSGGQP-DGRDLWAYSSDYLSAFHV

Query:  GGKRCAAGDCSRAQSRDQEERCVWRPPPNRELKLNIDASVRPDTGEAGGGFVLRGADGEVFMVACLSLQRCWSVDSAE----------------GWVVYR
           R  A  C      ++     WRPPP++ +K N DA+   D    G G+VLR   GEV  +   +L +  SV  AE                 +V++ 
Subjt:  GGKRCAAGDCSRAQSRDQEERCVWRPPPNRELKLNIDASVRPDTGEAGGGFVLRGADGEVFMVACLSLQRCWSVDSAE----------------GWVVYR

Query:  G-----IQLAG-------------QLGRILSPWDNGKVLFTLRQGNKVAHALARLAFSYVD
              I++                L R+LS +   K +F  R+GN +A  +AR + S+++
Subjt:  G-----IQLAG-------------QLGRILSPWDNGKVLFTLRQGNKVAHALARLAFSYVD

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein

3.0e-36

44.97

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Query:  AILCYTMNCFRLPRGLIKEIHRTMARFWWNGSEDERRMHWLSWDSLCLPK-CLGGLGFRNMELFNQALLAKQCWRVLQDPSSLLGSVLKGRYFPQSGFLE
        A+  Y M+CFRL + L K++   M  FWW+  E++R++ W++W  LC  K   GGLGFR++  FNQALLAKQ +R++  P +LL  +L+ RYFP S  +E
Subjt:  AILCYTMNCFRLPRGLIKEIHRTMARFWWNGSEDERRMHWLSWDSLCLPK-CLGGLGFRNMELFNQALLAKQCWRVLQDPSSLLGSVLKGRYFPQSGFLE

Query:  ADIGSRPSFVWRSLLWGRELLVRGCRWRIGNGRTTPIYGSNWLPNEFSL
          +G+RPS+ WRS++ GRELL RG    IG+G  T ++   W+ +E  L
Subjt:  ADIGSRPSFVWRSLLWGRELLVRGCRWRIGNGRTTPIYGSNWLPNEFSL

Sequences

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CDS sequence

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ATGGTTGGACCACAAACAGGTTGTTCATTAGAGGAGCACTGGCCTGGAATAGGGGTAGCGTCGCGACGCTGCCTTGCTAAGCGTCGCGACGTTGCTGCGCACGCGGCTTG
GGCAACACGAAAGGGTAGCGTCGCGACGCTGCCTTACTTAGCGTCTCGACGCTGCCCCAAATTTCCAGATTTTTCAGCTTCCTTTTGGGCTGATTTTTGGGCCTTCTTCT
TCATTTCTTTTGGTCTTTTCTTCATGCCGATTAGTCTTGTATCGTTGGAGCTTCTGATCTGTAGGTCCATTAGGTCTCACTGGTATCCCATTGACTCTCCTCTCAGAGGT
CTCCCCCAAAACACTCCCACAAGTCTCTTGCTTCAAGAAGTCTTAGAGATATACCGGTGTAGTCTATTGGTGGTGTTCGCTCAAGAGGGTTGCTGCGTTTTCAATCTTAT
TGGCAAGAAAAGGCGAATTGATCAAGGCTTTCTACAAAACCCGAATACGGGGGAAGAGGCTCAGCAGTATATCAGCCAAGTTCTTTCTGTGTCCTGCTGCCCATGTCATC
AGCAGTATCTAGGCCTGCCTTCGTTTATGCCACGTAACCGGTCGGGGGTGTTGAAGTTTGTGAAGGATCATATTTGGCACCAAATTCAGGGATGGAAGGGCAAATTCTTC
TCAGTTGCGGGTAAGGAGGTTCTCCTCAAGTCCATAGTTCAGGCGATTCTTTGCTACACGATGAACTGTTTTCGACTGCCCAGGGGTTTGATCAAGGAGATTCACAGGAC
TATGGCTAGATTTTGGTGGAATGGTTCTGAAGATGAAAGGCGAATGCATTGGCTGAGTTGGGATTCTCTATGTCTCCCAAAGTGCTTGGGTGGGTTGGGGTTCCGTAACA
TGGAGCTTTTTAACCAAGCCCTGCTGGCTAAACAGTGTTGGCGTGTTCTCCAGGATCCTTCCTCTCTTCTGGGCTCTGTGCTAAAGGGCCGTTATTTTCCCCAGTCAGGT
TTCTTGGAGGCAGATATTGGATCACGTCCATCTTTCGTCTGGCGCAGTTTGTTATGGGGGCGAGAGCTCTTAGTTCGTGGATGTCGGTGGAGGATTGGTAATGGGCGTAC
TACGCCCATCTATGGCTCGAACTGGCTGCCGAATGAGTTCTCACTTCAAATACAGTCGGCTCCAGTGCTTTCCCCTACTAGTACGGTGAGTGAGTTGTTCACTGCGTCTG
GTGGATGGAATGAGGCTTTGCTCAGAACGATTTTCAATGGGGCTGACTGTGAGGCTTTTTTGAGAATTCCACTGCGACATGGCTCGGAGGAGGATCGCTTAATCTGGCAC
TTTGAGAAGCACGGGAATTTTTCGGTGAAGAGTGGGTATCGGCTTGCTCAAACACTGGCTATCCAGGACCGACCTGGCTCCTCGAACTCTGAGAGAGTGCACATGTGGTG
GTCCGGCCTCTGGAGGTTGAATGTGTCCAATAAGCATAAGTTCTTCCTCTGGCGTCTGTGCCACGACCGCTTGCCAACTATGGTAAACCTTCTCAAACGTGGGCTCAGTG
TATCCCCTTTGTGTGTTTTGTGTGATGATGATGCAGAGGACTGTCTCCATCTGTTTTGGACCTGCCCTGTGGTTAAGAGTATGTGGTTGGGCTCTAGATTTGCTCTCCTC
CACCAACCCTTTTCCCATCTGAGGTTCGAGGAAATCATTGGGGCGATGAAGGACAAACAGACAGGGCCGGACTTTGAGCTTGTGGTCATTTTTTGGTGGTCTGTGTGGAA
TCTTCAAAACAGCCTGAGTTCGGGTGGGCAGCCAGACGGCCGAGATCTCTGGGCATATTCGAGTGATTACCTCAGCGCCTTCCATGTTGGTGGGAAGCGTTGCGCAGCAG
GGGACTGTTCACGGGCTCAATCGAGAGATCAGGAAGAGCGCTGTGTATGGCGACCGCCCCCTAATAGGGAGCTGAAACTTAATATCGATGCTTCTGTGAGGCCGGATACA
GGGGAAGCGGGGGGTGGCTTTGTGCTGCGTGGGGCTGATGGTGAGGTCTTCATGGTAGCTTGTTTGAGTTTACAGAGGTGTTGGAGCGTGGATTCGGCTGAGGGTTGGGT
TGTGTATAGAGGGATCCAACTTGCTGGACAGTTGGGAAGGATCCTCAGTCCTTGGGACAACGGTAAGGTTTTGTTTACTCTGCGTCAGGGAAACAAGGTTGCGCATGCTC
TGGCTCGCTTGGCCTTTTCATACGTTGATCGTGTCTGGCTTGAGGAGTGGCCTAGCGAGGTCTCGGACGTCCTGAGGGGCGATGTTGTTTTAGCTGCGTGA

mRNA sequence

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Protein sequence

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MVGPQTGCSLEEHWPGIGVASRRCLAKRRDVAAHAAWATRKGSVATLPYLASRRCPKFPDFSASFWADFWAFFFISFGLFFMPISLVSLELLICRSIRSHWYPIDSPLRG
LPQNTPTSLLLQEVLEIYRCSLLVVFAQEGCCVFNLIGKKRRIDQGFLQNPNTGEEAQQYISQVLSVSCCPCHQQYLGLPSFMPRNRSGVLKFVKDHIWHQIQGWKGKFF
SVAGKEVLLKSIVQAILCYTMNCFRLPRGLIKEIHRTMARFWWNGSEDERRMHWLSWDSLCLPKCLGGLGFRNMELFNQALLAKQCWRVLQDPSSLLGSVLKGRYFPQSG
FLEADIGSRPSFVWRSLLWGRELLVRGCRWRIGNGRTTPIYGSNWLPNEFSLQIQSAPVLSPTSTVSELFTASGGWNEALLRTIFNGADCEAFLRIPLRHGSEEDRLIWH
FEKHGNFSVKSGYRLAQTLAIQDRPGSSNSERVHMWWSGLWRLNVSNKHKFFLWRLCHDRLPTMVNLLKRGLSVSPLCVLCDDDAEDCLHLFWTCPVVKSMWLGSRFALL
HQPFSHLRFEEIIGAMKDKQTGPDFELVVIFWWSVWNLQNSLSSGGQPDGRDLWAYSSDYLSAFHVGGKRCAAGDCSRAQSRDQEERCVWRPPPNRELKLNIDASVRPDT
GEAGGGFVLRGADGEVFMVACLSLQRCWSVDSAEGWVVYRGIQLAGQLGRILSPWDNGKVLFTLRQGNKVAHALARLAFSYVDRVWLEEWPSEVSDVLRGDVVLAA

Lag0008733 (gene) of Sponge gourd (AG-4) v1 genome