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Lag0008735 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008735
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionpolygalacturonase 1 beta-like protein 3
Genome locationchr9:28916970..28917431
RNA-Seq ExpressionLag0008735
SyntenyLag0008735
Gene Ontology termsNA
InterPro domainsIPR004873 - BURP domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585155.1 Polygalacturonase 1 beta-like protein 3, partial [Cucurbita argyrosperma subsp. sororia]6.2e-4476.74Show/hide
Query:  MSVSRSLAKRWVELRKFFRESILKKGKVMAMPDIGDKMPKRLFLPRSIVSKLSFSSSKVGVMKKIFHSGENSSMETMMTETLRECERAPSAGETKRCVGS
        MSV+ SLA+RWVE  KFFRES+L+KG VMAMPDI DKMPKR FLPRSI+SKL FSSSK+GVMKKIFH+ +NSSMETMMTETLRECERAPSAGETKRCVGS
Subjt:  MSVSRSLAKRWVELRKFFRESILKKGKVMAMPDIGDKMPKRLFLPRSIVSKLSFSSSKVGVMKKIFHSGENSSMETMMTETLRECERAPSAGETKRCVGS

Query:  VEDMIDFTTSVLGRTWWFRRRRTPRSRRG
        VEDMIDF TSVLGR    R     +  +G
Subjt:  VEDMIDFTTSVLGRTWWFRRRRTPRSRRG

KAG6598207.1 Polygalacturonase 1 beta-like protein 3, partial [Cucurbita argyrosperma subsp. sororia]1.1e-4375.97Show/hide
Query:  MSVSRSLAKRWVELRKFFRESILKKGKVMAMPDIGDKMPKRLFLPRSIVSKLSFSSSKVGVMKKIFHSGENSSMETMMTETLRECERAPSAGETKRCVGS
        MSVS SLAKRWVE  KFFRES+L+KG VMAMPDI DKMPKR FLPRSI+SKL FSSSK+ VMK+IFH+G+NSSMETMMTETLR+CER PSAGETKRCVGS
Subjt:  MSVSRSLAKRWVELRKFFRESILKKGKVMAMPDIGDKMPKRLFLPRSIVSKLSFSSSKVGVMKKIFHSGENSSMETMMTETLRECERAPSAGETKRCVGS

Query:  VEDMIDFTTSVLGRTWWFRRRRTPRSRRG
        VEDMIDF TSVLGR    R     +  +G
Subjt:  VEDMIDFTTSVLGRTWWFRRRRTPRSRRG

KAG7020075.1 Polygalacturonase 1 beta-like protein 3 [Cucurbita argyrosperma subsp. argyrosperma]6.2e-4476.74Show/hide
Query:  MSVSRSLAKRWVELRKFFRESILKKGKVMAMPDIGDKMPKRLFLPRSIVSKLSFSSSKVGVMKKIFHSGENSSMETMMTETLRECERAPSAGETKRCVGS
        MSV+ SLA+RWVE  KFFRES+L+KG VMAMPDI DKMPKR FLPRSI+SKL FSSSK+GVMKKIFH+ +NSSMETMMTETLRECERAPSAGETKRCVGS
Subjt:  MSVSRSLAKRWVELRKFFRESILKKGKVMAMPDIGDKMPKRLFLPRSIVSKLSFSSSKVGVMKKIFHSGENSSMETMMTETLRECERAPSAGETKRCVGS

Query:  VEDMIDFTTSVLGRTWWFRRRRTPRSRRG
        VEDMIDF TSVLGR    R     +  +G
Subjt:  VEDMIDFTTSVLGRTWWFRRRRTPRSRRG

XP_004142981.1 polygalacturonase 1 beta-like protein 3 [Cucumis sativus]7.3e-4585.09Show/hide
Query:  MSVSRSLAKRWVELRKFFRESILKKGKVMAMPDIGDKMPKRLFLPRSIVSKLSFSSSKVGVMKKIFHSGENSSMETMMTETLRECERAPSAGETKRCVGS
        MSVS SLAKRWVE  KFFRES+L+KG VMAMPDI DKMPKR FLPRSI+SKL FSSSK+GVMK+IFH+G+NSSMETMMTET+RECER PSAGETKRCVGS
Subjt:  MSVSRSLAKRWVELRKFFRESILKKGKVMAMPDIGDKMPKRLFLPRSIVSKLSFSSSKVGVMKKIFHSGENSSMETMMTETLRECERAPSAGETKRCVGS

Query:  VEDMIDFTTSVLGR
        VEDMIDF TSVLGR
Subjt:  VEDMIDFTTSVLGR

XP_008444317.1 PREDICTED: polygalacturonase 1 beta-like protein 3 [Cucumis melo]6.2e-4476.56Show/hide
Query:  SVSRSLAKRWVELRKFFRESILKKGKVMAMPDIGDKMPKRLFLPRSIVSKLSFSSSKVGVMKKIFHSGENSSMETMMTETLRECERAPSAGETKRCVGSV
        SVS SLAKRWVE  KFFRES+L+KG VMAMPDI DKMPKR FLPRSI+SKL FSSSK+GVMK+IFH+G+NSSMETMMTET+RECER PSAGETKRCVGSV
Subjt:  SVSRSLAKRWVELRKFFRESILKKGKVMAMPDIGDKMPKRLFLPRSIVSKLSFSSSKVGVMKKIFHSGENSSMETMMTETLRECERAPSAGETKRCVGSV

Query:  EDMIDFTTSVLGRTWWFRRRRTPRSRRG
        EDMIDF TSVLGR    R     +  +G
Subjt:  EDMIDFTTSVLGRTWWFRRRRTPRSRRG

TrEMBL top hitse value%identityAlignment
A0A0A0LK44 BURP domain-containing protein3.6e-4585.09Show/hide
Query:  MSVSRSLAKRWVELRKFFRESILKKGKVMAMPDIGDKMPKRLFLPRSIVSKLSFSSSKVGVMKKIFHSGENSSMETMMTETLRECERAPSAGETKRCVGS
        MSVS SLAKRWVE  KFFRES+L+KG VMAMPDI DKMPKR FLPRSI+SKL FSSSK+GVMK+IFH+G+NSSMETMMTET+RECER PSAGETKRCVGS
Subjt:  MSVSRSLAKRWVELRKFFRESILKKGKVMAMPDIGDKMPKRLFLPRSIVSKLSFSSSKVGVMKKIFHSGENSSMETMMTETLRECERAPSAGETKRCVGS

Query:  VEDMIDFTTSVLGR
        VEDMIDF TSVLGR
Subjt:  VEDMIDFTTSVLGR

A0A1S3B9L4 polygalacturonase 1 beta-like protein 33.0e-4476.56Show/hide
Query:  SVSRSLAKRWVELRKFFRESILKKGKVMAMPDIGDKMPKRLFLPRSIVSKLSFSSSKVGVMKKIFHSGENSSMETMMTETLRECERAPSAGETKRCVGSV
        SVS SLAKRWVE  KFFRES+L+KG VMAMPDI DKMPKR FLPRSI+SKL FSSSK+GVMK+IFH+G+NSSMETMMTET+RECER PSAGETKRCVGSV
Subjt:  SVSRSLAKRWVELRKFFRESILKKGKVMAMPDIGDKMPKRLFLPRSIVSKLSFSSSKVGVMKKIFHSGENSSMETMMTETLRECERAPSAGETKRCVGSV

Query:  EDMIDFTTSVLGRTWWFRRRRTPRSRRG
        EDMIDF TSVLGR    R     +  +G
Subjt:  EDMIDFTTSVLGRTWWFRRRRTPRSRRG

A0A5A7V5U8 Polygalacturonase 1 beta-like protein 33.0e-4476.56Show/hide
Query:  SVSRSLAKRWVELRKFFRESILKKGKVMAMPDIGDKMPKRLFLPRSIVSKLSFSSSKVGVMKKIFHSGENSSMETMMTETLRECERAPSAGETKRCVGSV
        SVS SLAKRWVE  KFFRES+L+KG VMAMPDI DKMPKR FLPRSI+SKL FSSSK+GVMK+IFH+G+NSSMETMMTET+RECER PSAGETKRCVGSV
Subjt:  SVSRSLAKRWVELRKFFRESILKKGKVMAMPDIGDKMPKRLFLPRSIVSKLSFSSSKVGVMKKIFHSGENSSMETMMTETLRECERAPSAGETKRCVGSV

Query:  EDMIDFTTSVLGRTWWFRRRRTPRSRRG
        EDMIDF TSVLGR    R     +  +G
Subjt:  EDMIDFTTSVLGRTWWFRRRRTPRSRRG

A0A6J1HB03 polygalacturonase 1 beta-like protein 35.1e-4475.97Show/hide
Query:  MSVSRSLAKRWVELRKFFRESILKKGKVMAMPDIGDKMPKRLFLPRSIVSKLSFSSSKVGVMKKIFHSGENSSMETMMTETLRECERAPSAGETKRCVGS
        MSVS SLAKRWVE  KFFRES+L+KG VMAMPDI DKMPKR FLPRSI+SKL FSSSK+ VMK+IFH+G+NSSMETMMTETLR+CER PSAGETKRCVGS
Subjt:  MSVSRSLAKRWVELRKFFRESILKKGKVMAMPDIGDKMPKRLFLPRSIVSKLSFSSSKVGVMKKIFHSGENSSMETMMTETLRECERAPSAGETKRCVGS

Query:  VEDMIDFTTSVLGRTWWFRRRRTPRSRRG
        VEDMIDF TSVLGR    R     +  +G
Subjt:  VEDMIDFTTSVLGRTWWFRRRRTPRSRRG

A0A6J1KI28 polygalacturonase 1 beta-like protein 35.1e-4475.97Show/hide
Query:  MSVSRSLAKRWVELRKFFRESILKKGKVMAMPDIGDKMPKRLFLPRSIVSKLSFSSSKVGVMKKIFHSGENSSMETMMTETLRECERAPSAGETKRCVGS
        MSV+ SLA+RWVE  KFFRES+L+KG VMAMPDI DKMPKR FLPRSI+SKL FSSSK+GVMKKIFH+ +NSSMETMMTETLRECERAPSAGETKRCVGS
Subjt:  MSVSRSLAKRWVELRKFFRESILKKGKVMAMPDIGDKMPKRLFLPRSIVSKLSFSSSKVGVMKKIFHSGENSSMETMMTETLRECERAPSAGETKRCVGS

Query:  VEDMIDFTTSVLGRTWWFRRRRTPRSRRG
        VEDM+DF TSVLGR    R     +  +G
Subjt:  VEDMIDFTTSVLGRTWWFRRRRTPRSRRG

SwissProt top hitse value%identityAlignment
P92982 Polygalacturonase 1 beta-like protein 19.4e-3566.04Show/hide
Query:  RWVELRKFFRESILKKGKVMAMPDIGDKMPKRLFLPRSIVSKLSFSSSKVGVMKKIFHSGENSSMETMMTETLRECERAPSAGETKRCVGSVEDMIDFTT
        +WVE  KFFRES+LK+G ++ MPDI DKMPKR FLPRSIVSKL FS+SK+  +K++FH+ +NS+ME ++T+ +RECER P+  ETKRCVGS EDMIDF T
Subjt:  RWVELRKFFRESILKKGKVMAMPDIGDKMPKRLFLPRSIVSKLSFSSSKVGVMKKIFHSGENSSMETMMTETLRECERAPSAGETKRCVGSVEDMIDFTT

Query:  SVLGRT
        SVLGR+
Subjt:  SVLGRT

P92990 Polygalacturonase 1 beta-like protein 31.6e-3466.98Show/hide
Query:  RWVELRKFFRESILKKGKVMAMPDIGDKMPKRLFLPRSIVSKLSFSSSKVGVMKKIFHSGENSSMETMMTETLRECERAPSAGETKRCVGSVEDMIDFTT
        +W+E  KFFRES LK+G V+ MPDI DKMPKR FLPRSI++KL FS+SK+G +K+IFH+ ENS+M  ++T+ + ECER PS GETKRCVGS EDMIDF T
Subjt:  RWVELRKFFRESILKKGKVMAMPDIGDKMPKRLFLPRSIVSKLSFSSSKVGVMKKIFHSGENSSMETMMTETLRECERAPSAGETKRCVGSVEDMIDFTT

Query:  SVLGRT
        SVLGR+
Subjt:  SVLGRT

P93217 Polygalacturonase non-catalytic subunit AroGP21.7e-3155.2Show/hide
Query:  RSLAKRWVELRKFFRESILKKGKVMAMPDIGDKMPKRLFLPRSIVSKLSFSSSKVGVMKKIFHSGENSSMETMMTETLRECERAPSAGETKRCVGSVEDM
        + +  RW+E  KFFRE +LK G +M MPDI DKMPKR FLPR+I +KL FS+SK+  +KKIFH+  +S +  M+ + L ECERAPS GETK+CV S EDM
Subjt:  RSLAKRWVELRKFFRESILKKGKVMAMPDIGDKMPKRLFLPRSIVSKLSFSSSKVGVMKKIFHSGENSSMETMMTETLRECERAPSAGETKRCVGSVEDM

Query:  IDFTTSVLGRTWWFRRRRTPRSRRG
        IDF TSVLGR    R        +G
Subjt:  IDFTTSVLGRTWWFRRRRTPRSRRG

P93218 Polygalacturonase non-catalytic subunit AroGP31.7e-3155.2Show/hide
Query:  RSLAKRWVELRKFFRESILKKGKVMAMPDIGDKMPKRLFLPRSIVSKLSFSSSKVGVMKKIFHSGENSSMETMMTETLRECERAPSAGETKRCVGSVEDM
        + +  RW+E  KFFRE +LK G +M MPDI DKMPKR FLPR+I +KL FS+SK+  +KKIFH+  +S +  M+ + L ECERAPS GETK+CV S EDM
Subjt:  RSLAKRWVELRKFFRESILKKGKVMAMPDIGDKMPKRLFLPRSIVSKLSFSSSKVGVMKKIFHSGENSSMETMMTETLRECERAPSAGETKRCVGSVEDM

Query:  IDFTTSVLGRTWWFRRRRTPRSRRG
        IDF TSVLGR    R        +G
Subjt:  IDFTTSVLGRTWWFRRRRTPRSRRG

Q40161 Polygalacturonase-1 non-catalytic subunit beta3.6e-3460Show/hide
Query:  RSLAKRWVELRKFFRESILKKGKVMAMPDIGDKMPKRLFLPRSIVSKLSFSSSKVGVMKKIFHSGENSSMETMMTETLRECERAPSAGETKRCVGSVEDM
        + +  RWVE  KFFRE +LK G +M MPDI DKMPKR FLPR I SKL FS+SK+  +KKIFH+G+ S +E M+ + L ECERAPSAGETKRCV S EDM
Subjt:  RSLAKRWVELRKFFRESILKKGKVMAMPDIGDKMPKRLFLPRSIVSKLSFSSSKVGVMKKIFHSGENSSMETMMTETLRECERAPSAGETKRCVGSVEDM

Query:  IDFTTSVLGRTWWFRRRRTPRSRRG
        IDF TSVLGR    R     +   G
Subjt:  IDFTTSVLGRTWWFRRRRTPRSRRG

Arabidopsis top hitse value%identityAlignment
AT1G23760.1 BURP domain-containing protein6.6e-3666.04Show/hide
Query:  RWVELRKFFRESILKKGKVMAMPDIGDKMPKRLFLPRSIVSKLSFSSSKVGVMKKIFHSGENSSMETMMTETLRECERAPSAGETKRCVGSVEDMIDFTT
        +WVE  KFFRES+LK+G ++ MPDI DKMPKR FLPRSIVSKL FS+SK+  +K++FH+ +NS+ME ++T+ +RECER P+  ETKRCVGS EDMIDF T
Subjt:  RWVELRKFFRESILKKGKVMAMPDIGDKMPKRLFLPRSIVSKLSFSSSKVGVMKKIFHSGENSSMETMMTETLRECERAPSAGETKRCVGSVEDMIDFTT

Query:  SVLGRT
        SVLGR+
Subjt:  SVLGRT

AT1G60390.1 polygalacturonase 12.6e-3259.65Show/hide
Query:  MSVSRSLAKRWVELRKFFRESILKKGKVMAMPDIGDKMPKRLFLPRSIVSKLSFSSSKVGVMKKIFHSGENSSMETMMTETLRECERAPSAGETKRCVGS
        +S +     +WVE  KFFRE++LK+G +M MPDI DKMPKR FLPR+IV  L FSSS +G + ++F +GENSSM  +++  + ECER  S GETKRCVGS
Subjt:  MSVSRSLAKRWVELRKFFRESILKKGKVMAMPDIGDKMPKRLFLPRSIVSKLSFSSSKVGVMKKIFHSGENSSMETMMTETLRECERAPSAGETKRCVGS

Query:  VEDMIDFTTSVLGR
         EDMIDF TSVLGR
Subjt:  VEDMIDFTTSVLGR

AT1G70370.1 polygalacturonase 21.1e-3566.98Show/hide
Query:  RWVELRKFFRESILKKGKVMAMPDIGDKMPKRLFLPRSIVSKLSFSSSKVGVMKKIFHSGENSSMETMMTETLRECERAPSAGETKRCVGSVEDMIDFTT
        +W+E  KFFRES LK+G V+ MPDI DKMPKR FLPRSI++KL FS+SK+G +K+IFH+ ENS+M  ++T+ + ECER PS GETKRCVGS EDMIDF T
Subjt:  RWVELRKFFRESILKKGKVMAMPDIGDKMPKRLFLPRSIVSKLSFSSSKVGVMKKIFHSGENSSMETMMTETLRECERAPSAGETKRCVGSVEDMIDFTT

Query:  SVLGRT
        SVLGR+
Subjt:  SVLGRT

AT1G70370.2 polygalacturonase 21.1e-3566.98Show/hide
Query:  RWVELRKFFRESILKKGKVMAMPDIGDKMPKRLFLPRSIVSKLSFSSSKVGVMKKIFHSGENSSMETMMTETLRECERAPSAGETKRCVGSVEDMIDFTT
        +W+E  KFFRES LK+G V+ MPDI DKMPKR FLPRSI++KL FS+SK+G +K+IFH+ ENS+M  ++T+ + ECER PS GETKRCVGS EDMIDF T
Subjt:  RWVELRKFFRESILKKGKVMAMPDIGDKMPKRLFLPRSIVSKLSFSSSKVGVMKKIFHSGENSSMETMMTETLRECERAPSAGETKRCVGSVEDMIDFTT

Query:  SVLGRT
        SVLGR+
Subjt:  SVLGRT

AT5G25610.1 BURP domain-containing protein1.3e-0736Show/hide
Query:  FFRESILKKGKVMAMPDIGDK--MPKRLFLPRSIVSKLSFSSSKVGVMKKIFHSGENSSMETMMTETLRECERAPSAGETKRCVGSVEDMIDFTTSVLGR
        FF E  L +GK M +    +     K  FLPR     + F S K     K F     S    MM +T+ ECE    +GE K C  S+E M+DF+ S LG+
Subjt:  FFRESILKKGKVMAMPDIGDK--MPKRLFLPRSIVSKLSFSSSKVGVMKKIFHSGENSSMETMMTETLRECERAPSAGETKRCVGSVEDMIDFTTSVLGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGTGAGCAGGAGTTTGGCGAAGAGGTGGGTAGAGCTCAGGAAGTTCTTTCGGGAGTCGATCCTGAAGAAGGGGAAGGTGATGGCGATGCCAGACATCGGAGATAA
AATGCCGAAGAGGTTGTTCTTGCCTAGATCTATCGTGTCGAAGTTGTCGTTTTCGAGTTCGAAAGTGGGAGTGATGAAGAAAATATTCCACTCGGGGGAGAACTCGTCGA
TGGAGACAATGATGACGGAGACACTGAGGGAGTGCGAGAGGGCTCCGAGTGCGGGTGAGACGAAGCGGTGCGTGGGGTCGGTGGAAGACATGATAGACTTCACGACGTCG
GTGTTGGGCAGAACGTGGTGGTTCAGACGACGGAGAACACCAAGAAGTCGAAGGGGAACGACCCCTCCCTCCTCCCGTCGCCAGTGTCGGAAAGGGAGGAGGAGTCCTCC
TCCCTTTCCCTCTTCTTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGTGAGCAGGAGTTTGGCGAAGAGGTGGGTAGAGCTCAGGAAGTTCTTTCGGGAGTCGATCCTGAAGAAGGGGAAGGTGATGGCGATGCCAGACATCGGAGATAA
AATGCCGAAGAGGTTGTTCTTGCCTAGATCTATCGTGTCGAAGTTGTCGTTTTCGAGTTCGAAAGTGGGAGTGATGAAGAAAATATTCCACTCGGGGGAGAACTCGTCGA
TGGAGACAATGATGACGGAGACACTGAGGGAGTGCGAGAGGGCTCCGAGTGCGGGTGAGACGAAGCGGTGCGTGGGGTCGGTGGAAGACATGATAGACTTCACGACGTCG
GTGTTGGGCAGAACGTGGTGGTTCAGACGACGGAGAACACCAAGAAGTCGAAGGGGAACGACCCCTCCCTCCTCCCGTCGCCAGTGTCGGAAAGGGAGGAGGAGTCCTCC
TCCCTTTCCCTCTTCTTTATAA
Protein sequenceShow/hide protein sequence
MSVSRSLAKRWVELRKFFRESILKKGKVMAMPDIGDKMPKRLFLPRSIVSKLSFSSSKVGVMKKIFHSGENSSMETMMTETLRECERAPSAGETKRCVGSVEDMIDFTTS
VLGRTWWFRRRRTPRSRRGTTPPSSRRQCRKGRRSPPPFPSSL