; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0008749 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008749
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr9:29146595..29147347
RNA-Seq ExpressionLag0008749
SyntenyLag0008749
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_019178826.1 PREDICTED: uncharacterized protein LOC109173960 [Ipomoea nil]1.3e-1037.76Show/hide
Query:  AYEGFPTMQGQQTPIHYFQNNQSLTMQLGSSSGTLVFLVKNLSDGIRVLQEGQLKFQEETRTEMQQLRAQVSQLADAIRKLEAKIDKLSGQSEI-PKR--
        +Y+  P  Q  Q   H  Q   S + Q  S+SGT      +L D ++ L     +FQ+ETRT +Q L +QVSQLA  + +LE++  KL  Q+ + PK+  
Subjt:  AYEGFPTMQGQQTPIHYFQNNQSLTMQLGSSSGTLVFLVKNLSDGIRVLQEGQLKFQEETRTEMQQLRAQVSQLADAIRKLEAKIDKLSGQSEI-PKR--

Query:  --------KEAKKPEE--KTNNVDFRKKRGVYFDPPID--FSSNVPKA-----SFPSRLALQPEPPKEEEEKDILDSFKKVEVNIPLLDTVKLIPK
                KE K+  +  KT N D   ++ V   P  D      +PK+      FPSRLA   +  K EEEK+IL++F+K+EVNIPLLD +K IP+
Subjt:  --------KEAKKPEE--KTNNVDFRKKRGVYFDPPID--FSSNVPKA-----SFPSRLALQPEPPKEEEEKDILDSFKKVEVNIPLLDTVKLIPK

XP_031116495.1 uncharacterized protein LOC116020153 [Ipomoea triloba]1.7e-1035.6Show/hide
Query:  FPTMQGQQTPIHYFQNNQSLTMQLGSSSGTLVFLVKNLSDGIRVLQEGQLKFQEETRTEMQQLRAQVSQLADAIRKLEAKIDKLSGQSEI-PKR------
        FP  Q +Q PI   Q + S      +SS +L  +VK+L+   +  Q+   +FQ+ETRT +Q L +Q+SQLA  + +LE++  KL  Q+ + PK+      
Subjt:  FPTMQGQQTPIHYFQNNQSLTMQLGSSSGTLVFLVKNLSDGIRVLQEGQLKFQEETRTEMQQLRAQVSQLADAIRKLEAKIDKLSGQSEI-PKR------

Query:  ----KEAKKPEEKTNNVDFRKKRGVYFDPPIDFSSNVPKA--------SFPSRLALQPEPPKEEEEKDILDSFKKVEVNIPLLDTVKLIPK
            KE  +P +  +  +  ++    F PP +    V ++         FPSRLA   +  K EE+K+IL++F+KVEVNIPLLD +K IP+
Subjt:  ----KEAKKPEEKTNNVDFRKKRGVYFDPPIDFSSNVPKA--------SFPSRLALQPEPPKEEEEKDILDSFKKVEVNIPLLDTVKLIPK

XP_038708074.1 uncharacterized protein LOC120003252 isoform X1 [Tripterygium wilfordii]2.0e-1137.74Show/hide
Query:  LSDGIRVLQEGQLKFQEETRTEMQQLRAQVSQLADAIRKLEAK-IDKLSGQSEIPKRKEA-----------------------KKPEEKTNNVDFRKKRG
        L + I+ L     +FQ+ETR+ +Q L  Q+SQLA A+  LEA+   KL  Q+ +  R+ A                       K  EE+  N D +    
Subjt:  LSDGIRVLQEGQLKFQEETRTEMQQLRAQVSQLADAIRKLEAK-IDKLSGQSEIPKRKEA-----------------------KKPEEKTNNVDFRKKRG

Query:  VYFDPPIDFSSNVPKASFPSRLALQPEPPKEEEEKDILDSFKKVEVNIPLLDTVKLIPK
        V   P +  SSN     FPSRL+   +  KE++EKDIL++F+KVEVNIPLLD +K +PK
Subjt:  VYFDPPIDFSSNVPKASFPSRLALQPEPPKEEEEKDILDSFKKVEVNIPLLDTVKLIPK

XP_038708081.1 uncharacterized protein LOC120003252 isoform X2 [Tripterygium wilfordii]2.0e-1137.74Show/hide
Query:  LSDGIRVLQEGQLKFQEETRTEMQQLRAQVSQLADAIRKLEAK-IDKLSGQSEIPKRKEA-----------------------KKPEEKTNNVDFRKKRG
        L + I+ L     +FQ+ETR+ +Q L  Q+SQLA A+  LEA+   KL  Q+ +  R+ A                       K  EE+  N D +    
Subjt:  LSDGIRVLQEGQLKFQEETRTEMQQLRAQVSQLADAIRKLEAK-IDKLSGQSEIPKRKEA-----------------------KKPEEKTNNVDFRKKRG

Query:  VYFDPPIDFSSNVPKASFPSRLALQPEPPKEEEEKDILDSFKKVEVNIPLLDTVKLIPK
        V   P +  SSN     FPSRL+   +  KE++EKDIL++F+KVEVNIPLLD +K +PK
Subjt:  VYFDPPIDFSSNVPKASFPSRLALQPEPPKEEEEKDILDSFKKVEVNIPLLDTVKLIPK

XP_038708082.1 uncharacterized protein LOC120003252 isoform X3 [Tripterygium wilfordii]2.0e-1137.74Show/hide
Query:  LSDGIRVLQEGQLKFQEETRTEMQQLRAQVSQLADAIRKLEAK-IDKLSGQSEIPKRKEA-----------------------KKPEEKTNNVDFRKKRG
        L + I+ L     +FQ+ETR+ +Q L  Q+SQLA A+  LEA+   KL  Q+ +  R+ A                       K  EE+  N D +    
Subjt:  LSDGIRVLQEGQLKFQEETRTEMQQLRAQVSQLADAIRKLEAK-IDKLSGQSEIPKRKEA-----------------------KKPEEKTNNVDFRKKRG

Query:  VYFDPPIDFSSNVPKASFPSRLALQPEPPKEEEEKDILDSFKKVEVNIPLLDTVKLIPK
        V   P +  SSN     FPSRL+   +  KE++EKDIL++F+KVEVNIPLLD +K +PK
Subjt:  VYFDPPIDFSSNVPKASFPSRLALQPEPPKEEEEKDILDSFKKVEVNIPLLDTVKLIPK

TrEMBL top hitse value%identityAlignment
A0A0J8BAH8 Retrotrans_gag domain-containing protein7.0e-1031.76Show/hide
Query:  VSKFKSEMFELKTLISQLAVEKESPSERNAYEGFPTMQGQQTPIHYFQNNQSLTMQLGSSSGTLVFLVKNLSDGIRVLQEGQLKFQEETRTEMQQLRAQV
        +SK + ++  L +L+ Q  + K          G    Q Q  P      NQ + +Q    SG +     +L D +  +    L+FQ+ETR+ +Q L  QV
Subjt:  VSKFKSEMFELKTLISQLAVEKESPSERNAYEGFPTMQGQQTPIHYFQNNQSLTMQLGSSSGTLVFLVKNLSDGIRVLQEGQLKFQEETRTEMQQLRAQV

Query:  SQLADAIRKLEA-KIDKLSGQS-------------------EIPKRKEAK----KPEEKTNNVD-FRKKRGVYFDPPI---DFSSNVPKASFPSRLALQP
        SQLAD + +L+A   +KL  Q                    EIP + + K    + +E TN  D  + ++ V  D P+    FSS VP   +PSRL  + 
Subjt:  SQLADAIRKLEA-KIDKLSGQS-------------------EIPKRKEAK----KPEEKTNNVD-FRKKRGVYFDPPI---DFSSNVPKASFPSRLALQP

Query:  EPPKEEEEKDILDSFKKVEVNIPLLDTVKLIPK
        +  K E+EK++LD F+KVEVNIPLL+ ++ +P+
Subjt:  EPPKEEEEKDILDSFKKVEVNIPLLDTVKLIPK

A0A2G9G7U9 DNA-directed DNA polymerase1.2e-0935.75Show/hide
Query:  FQNNQSLTMQLGSSSGTLVFLVKNLSDGIRVLQEGQLKFQEETRTEMQQLRAQVSQLADAIRKLEAKIDKLSGQSEI-PKR----------KEAKKPEEK
        FQ+ Q    Q  SSSG       +L D ++ L     +FQ+ETR  +Q L  QV QLA ++ +LE++  KL  Q+ I PK+          KE K+P  K
Subjt:  FQNNQSLTMQLGSSSGTLVFLVKNLSDGIRVLQEGQLKFQEETRTEMQQLRAQVSQLADAIRKLEAKIDKLSGQSEI-PKR----------KEAKKPEEK

Query:  TN--NVDFRKKRGVYFDPPIDFSSNVPKASFPSRLALQPEPP-------KEEEEKDILDSFKKVEVNIPLLDTVKLIPK
            + +   ++ +   P     S  P+   P+ + +QP  P       K+EEEK+IL++F+KVEVNIPLLD +K IP+
Subjt:  TN--NVDFRKKRGVYFDPPIDFSSNVPKASFPSRLALQPEPP-------KEEEEKDILDSFKKVEVNIPLLDTVKLIPK

A0A2I0J629 Uncharacterized protein4.5e-0930.84Show/hide
Query:  NAVSKFKSEMFELKTLISQLAVEKESPSERNAYEGFPTM----QGQQTP---IHYFQNNQSLTMQLGSSSGTLVFLVKNLSDGIRVLQEGQLKFQEETRT
        NA+S+F +          Q   +  S   ++ +   P +    Q QQ P     Y + +  L  +  SS+        +L D ++ L    L FQ+E R+
Subjt:  NAVSKFKSEMFELKTLISQLAVEKESPSERNAYEGFPTM----QGQQTP---IHYFQNNQSLTMQLGSSSGTLVFLVKNLSDGIRVLQEGQLKFQEETRT

Query:  EMQQLRAQVSQLADAIRKLEAKIDKLSGQSEIPKRKEAKKPEEKTNNVDFRKKRGVYFDPPIDFSSNVPKASFPSRLALQPEPPKEEEEKDILDSFKKVE
         +Q L +Q SQLA  + KLE    KL  Q+EI  R+ A     ++  V             ++ +  +P   FP R A   E   EE E++IL++F+KVE
Subjt:  EMQQLRAQVSQLADAIRKLEAKIDKLSGQSEIPKRKEAKKPEEKTNNVDFRKKRGVYFDPPIDFSSNVPKASFPSRLALQPEPPKEEEEKDILDSFKKVE

Query:  VNIPLLDTVKLIPK
        VNIPLLDT+K +P+
Subjt:  VNIPLLDTVKLIPK

A0A484LEC0 Uncharacterized protein8.3e-1131.05Show/hide
Query:  DNAVSKFKSEMFELKTLISQLAVEKESPSERNAYEGFPTMQGQQTPIHYFQNNQSLTMQLGSS---SGTLVFLVKNLSDGIRVLQEGQLKFQEETRTEMQ
        DN  S  +  + E   L    + ++      N Y   P  +      +  +NNQ  + Q   S   + T+  +++ L DG   L++ +LKF++ETR  MQ
Subjt:  DNAVSKFKSEMFELKTLISQLAVEKESPSERNAYEGFPTMQGQQTPIHYFQNNQSLTMQLGSS---SGTLVFLVKNLSDGIRVLQEGQLKFQEETRTEMQ

Query:  QLRAQVSQLADAIRKLEAKI-DKLSGQSEIP------------KRKEAKKPEEKTNNVDFRKKRGVYFD--------------PPID----------FSS
         LR QV QLA +I KLE+++ +KL  QS  P            K     + +E    VD  ++  V  D               P+D           S 
Subjt:  QLRAQVSQLADAIRKLEAKI-DKLSGQSEIP------------KRKEAKKPEEKTNNVDFRKKRGVYFD--------------PPID----------FSS

Query:  NVPKASFPSRLALQPEPPKEEEEKDILDSFKKVEVNIPLLDTVKLIPK
        NV    FPSRLA Q    KE+ +KDI ++F+KVEVNIPL+D +K +P+
Subjt:  NVPKASFPSRLALQPEPPKEEEEKDILDSFKKVEVNIPLLDTVKLIPK

A0A6P6S4W1 uncharacterized protein LOC1136874154.5e-0934.95Show/hide
Query:  FQNNQSLTMQLGSSS--GTLVFLVKNLSDGIRVLQEGQLKFQEETRTEMQQLRAQVSQLADAIRKLEAKI-DKLSGQSEI------------------PK
        FQ       QL SS+   +L  +VK+L+     +Q+   +FQ+ETR+ M+ + A++SQLA AI +LE+    KL  Q EI                  PK
Subjt:  FQNNQSLTMQLGSSS--GTLVFLVKNLSDGIRVLQEGQLKFQEETRTEMQQLRAQVSQLADAIRKLEAKI-DKLSGQSEI------------------PK

Query:  RKEAKKPEEKTNNVDFRKKRGVYFDPPIDFS------SNVPKASFPSRLALQPEPPKEEEEKDILDSFKKVEVNIPLLDTVKLIPK
         + +K   E+    +  ++  +  DP + F+      SN+P   FP RL    +  K E EK+ILD F+KV+VNIPLLD +K +PK
Subjt:  RKEAKKPEEKTNNVDFRKKRGVYFDPPIDFS------SNVPKASFPSRLALQPEPPKEEEEKDILDSFKKVEVNIPLLDTVKLIPK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAGAGAACAAGTGCAGACAACGCGGTAAGCAAGTTCAAATCTGAAATGTTTGAGCTCAAGACTCTCATTAGTCAGTTGGCTGTAGAGAAGGAATCCCCATCTGA
GCGTAATGCATATGAAGGATTTCCAACAATGCAAGGCCAACAAACACCAATCCATTACTTCCAGAACAATCAAAGCCTGACAATGCAGCTTGGATCAAGTTCAGGTACTT
TAGTGTTTTTAGTTAAAAACTTATCTGATGGCATTCGAGTTTTACAGGAAGGTCAACTCAAATTCCAAGAGGAGACAAGAACTGAGATGCAACAATTGAGAGCCCAAGTT
TCTCAGTTGGCTGACGCCATCAGAAAGTTGGAGGCCAAAATTGACAAACTGTCTGGGCAATCTGAGATCCCAAAGAGAAAAGAAGCAAAGAAGCCTGAAGAGAAGACAAA
CAATGTTGACTTTCGAAAGAAGCGAGGGGTATATTTCGATCCTCCTATTGATTTTAGTTCTAATGTTCCTAAAGCTTCTTTCCCTAGTAGGTTAGCGCTGCAGCCTGAAC
CTCCCAAGGAAGAGGAAGAGAAGGACATACTTGACTCATTCAAGAAGGTGGAGGTCAACATCCCGCTTCTGGACACCGTAAAATTGATTCCTAAGGTAGGAAACTGTTGG
GTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGAGAGAACAAGTGCAGACAACGCGGTAAGCAAGTTCAAATCTGAAATGTTTGAGCTCAAGACTCTCATTAGTCAGTTGGCTGTAGAGAAGGAATCCCCATCTGA
GCGTAATGCATATGAAGGATTTCCAACAATGCAAGGCCAACAAACACCAATCCATTACTTCCAGAACAATCAAAGCCTGACAATGCAGCTTGGATCAAGTTCAGGTACTT
TAGTGTTTTTAGTTAAAAACTTATCTGATGGCATTCGAGTTTTACAGGAAGGTCAACTCAAATTCCAAGAGGAGACAAGAACTGAGATGCAACAATTGAGAGCCCAAGTT
TCTCAGTTGGCTGACGCCATCAGAAAGTTGGAGGCCAAAATTGACAAACTGTCTGGGCAATCTGAGATCCCAAAGAGAAAAGAAGCAAAGAAGCCTGAAGAGAAGACAAA
CAATGTTGACTTTCGAAAGAAGCGAGGGGTATATTTCGATCCTCCTATTGATTTTAGTTCTAATGTTCCTAAAGCTTCTTTCCCTAGTAGGTTAGCGCTGCAGCCTGAAC
CTCCCAAGGAAGAGGAAGAGAAGGACATACTTGACTCATTCAAGAAGGTGGAGGTCAACATCCCGCTTCTGGACACCGTAAAATTGATTCCTAAGGTAGGAAACTGTTGG
GTTTAA
Protein sequenceShow/hide protein sequence
MAERTSADNAVSKFKSEMFELKTLISQLAVEKESPSERNAYEGFPTMQGQQTPIHYFQNNQSLTMQLGSSSGTLVFLVKNLSDGIRVLQEGQLKFQEETRTEMQQLRAQV
SQLADAIRKLEAKIDKLSGQSEIPKRKEAKKPEEKTNNVDFRKKRGVYFDPPIDFSSNVPKASFPSRLALQPEPPKEEEEKDILDSFKKVEVNIPLLDTVKLIPKVGNCW
V