; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0008762 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008762
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon gag protein
Genome locationchr9:29403749..29405395
RNA-Seq ExpressionLag0008762
SyntenyLag0008762
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025725.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.8e-1358.23Show/hide
Query:  MSMVATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSIFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSILSR
        +SM   +EENQC TST+ R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D K++S + SR
Subjt:  MSMVATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSIFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSILSR
KAA0032941.1 hypothetical protein E6C27_scaffold269G00150 [Cucumis melo var. makuwa]3.0e-1361.04Show/hide
Query:  MVATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSIFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSILSR
        M   KEENQC TST+TR SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M  L+ K F E N D K+ S + SR
Subjt:  MVATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSIFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSILSR
KAA0044978.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.0e-1358.23Show/hide
Query:  MSMVATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSIFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSILSR
        +SM   +EENQC TST+ R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D K+ S + SR
Subjt:  MSMVATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSIFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSILSR
KAA0051228.1 hypothetical protein E6C27_scaffold1250G00350 [Cucumis melo var. makuwa]3.0e-1358.23Show/hide
Query:  MSMVATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSIFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSILSR
        +SM   +EENQC TST+ R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D K+ S + SR
Subjt:  MSMVATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSIFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSILSR
TYK18884.1 gag protease polyprotein [Cucumis melo var. makuwa]3.0e-1358.23Show/hide
Query:  MSMVATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSIFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSILSR
        +SM   +EENQC TST+ R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D K+ S + SR
Subjt:  MSMVATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSIFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSILSR
TrEMBL top hitse value%identityAlignment
A0A5A7SMQ5 Retrotransposon gag protein8.6e-1458.23Show/hide
Query:  MSMVATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSIFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSILSR
        +SM   +EENQC TST+ R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D K++S + SR
Subjt:  MSMVATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSIFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSILSR
A0A5A7TQ06 Retrotransposon gag protein1.5e-1358.23Show/hide
Query:  MSMVATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSIFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSILSR
        +SM   +EENQC TST+ R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D K+ S + SR
Subjt:  MSMVATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSIFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSILSR
A0A5A7VFA5 Ty3-gypsy retrotransposon protein1.5e-1359.49Show/hide
Query:  MSMVATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSIFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSILSR
        +SM   +EENQC TST+TR SAF+RLS+STSKK +PSTS FDRLK+ +DQ +R+M +L+ K F E N D K+ S I SR
Subjt:  MSMVATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSIFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSILSR
A0A5D3BBF9 Gag protease polyprotein1.5e-1358.23Show/hide
Query:  MSMVATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSIFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSILSR
        +SM   +EENQC TST+ R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D K+ S + SR
Subjt:  MSMVATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSIFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSILSR
A0A5D3D5Q0 Gag protease polyprotein1.5e-1358.23Show/hide
Query:  MSMVATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSIFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSILSR
        +SM   +EENQC TST+ R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D K+ S + SR
Subjt:  MSMVATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSIFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSILSR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTATGGTCGCAACAAAAGAAGAAAATCAATGTTCGACGTCCACCTTCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCAACCTTC
AACATCTATTTTTGATCGCCTCAAAGTAACAAGCGATCAACCTAAAAGAAAGATGGATAACTTGGAGGTGAAACTTTTCGATGAAGTAAACAGTGACAAGAAGCTTCAAA
GTAGCATCCTGTCACGTTCTCACGCATTTCGCTGTAGTTTCTTCTCTCCAAATTTGAAGGTTCTCACGCATTTCGCTGCAGTTCCTTCTCTCAGAGTTCGAAGGTTCTCA
CGCTGTTTCGCTGTAGTTCCTTCTTTCCAAGTTCGAAGGTTCTCACATTGTTGCGCTGCAGTTCCTTCTCTCAAGTTTGAAGGTTCTCACGTGTTTCGCTGTAGTTCCTT
CTCTCCAAGGTTCTCATGCGCTGCGTTGCAGTTCCTTCTCCCCAAGCTCGAAGGTTTTCACACACTTCGATACAGTTCCTTCTCTCCAAGTTCGAAGGTTCTGACATTGC
ACTACTTCGTTGTTCCTTCTCCAAGTTCGAAGGTTCTCACGCTGCACTACTTTGCTGTTCCTTCTCAAAGTTCGAAGTTTGCACCCTCTACCGTTGCGCGCTGCTCCCTT
TTCTCTCGCGGTTTGAAGGTTCTGACACTGCACTGCTTCCTTCACCACGTTCGAAGGTTCTCACGCTGCACTGCTTCGTTGTTCCTTCTCCAAGTTCGAAGGTTCTCACG
CTGCACTGCTTCCTTCTCCAAGTTCGAAGGTCTTCATGCTACGCTCGGCTGCGCTGATGCGCTACTTTCTAAAGTCCAAGGAACATGTCCTTGTACTCGTGCAGAGACGT
GGCGACAGAAAAGTAGAAGGAACATGTCCCTGTACTCATGCAGAAGGTCGTGGCGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTATGGTCGCAACAAAAGAAGAAAATCAATGTTCGACGTCCACCTTCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCAACCTTC
AACATCTATTTTTGATCGCCTCAAAGTAACAAGCGATCAACCTAAAAGAAAGATGGATAACTTGGAGGTGAAACTTTTCGATGAAGTAAACAGTGACAAGAAGCTTCAAA
GTAGCATCCTGTCACGTTCTCACGCATTTCGCTGTAGTTTCTTCTCTCCAAATTTGAAGGTTCTCACGCATTTCGCTGCAGTTCCTTCTCTCAGAGTTCGAAGGTTCTCA
CGCTGTTTCGCTGTAGTTCCTTCTTTCCAAGTTCGAAGGTTCTCACATTGTTGCGCTGCAGTTCCTTCTCTCAAGTTTGAAGGTTCTCACGTGTTTCGCTGTAGTTCCTT
CTCTCCAAGGTTCTCATGCGCTGCGTTGCAGTTCCTTCTCCCCAAGCTCGAAGGTTTTCACACACTTCGATACAGTTCCTTCTCTCCAAGTTCGAAGGTTCTGACATTGC
ACTACTTCGTTGTTCCTTCTCCAAGTTCGAAGGTTCTCACGCTGCACTACTTTGCTGTTCCTTCTCAAAGTTCGAAGTTTGCACCCTCTACCGTTGCGCGCTGCTCCCTT
TTCTCTCGCGGTTTGAAGGTTCTGACACTGCACTGCTTCCTTCACCACGTTCGAAGGTTCTCACGCTGCACTGCTTCGTTGTTCCTTCTCCAAGTTCGAAGGTTCTCACG
CTGCACTGCTTCCTTCTCCAAGTTCGAAGGTCTTCATGCTACGCTCGGCTGCGCTGATGCGCTACTTTCTAAAGTCCAAGGAACATGTCCTTGTACTCGTGCAGAGACGT
GGCGACAGAAAAGTAGAAGGAACATGTCCCTGTACTCATGCAGAAGGTCGTGGCGGTGA
Protein sequenceShow/hide protein sequence
MSMVATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSIFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSILSRSHAFRCSFFSPNLKVLTHFAAVPSLRVRRFS
RCFAVVPSFQVRRFSHCCAAVPSLKFEGSHVFRCSSFSPRFSCAALQFLLPKLEGFHTLRYSSFSPSSKVLTLHYFVVPSPSSKVLTLHYFAVPSQSSKFAPSTVARCSL
FSRGLKVLTLHCFLHHVRRFSRCTASLFLLQVRRFSRCTASFSKFEGLHATLGCADALLSKVQGTCPCTRAETWRQKSRRNMSLYSCRRSWR