; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0008770 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008770
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr9:29593202..29594317
RNA-Seq ExpressionLag0008770
SyntenyLag0008770
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABA98898.1 retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group]9.8e-3527.93Show/hide
Query:  EDILSIPLGRSQSKDEIIWAEHPKGAFTVKSAYHLAMNLEDLKQASSSDNSNLKRLWRNFWNLKIIPRVKICVWKLLNNIIPTKVNLLSKGIDTNLLCLF
        E I SI L   Q +D I W     G F+++SAY LA+ L +  ++SSS  ++ K++W + W   I  +VK+  W+ ++N +PT VN   +  + + +C F
Subjt:  EDILSIPLGRSQSKDEIIWAEHPKGAFTVKSAYHLAMNLEDLKQASSSDNSNLKRLWRNFWNLKIIPRVKICVWKLLNNIIPTKVNLLSKGIDTNLLCLF

Query:  CRCKEESTSHLVWECKFSKSVWLKFLPTLSNFFNVCRPNWDALTFWEGLMGRLGEEDTCVAALILWK-----------EANPDQNQISRFIEASIS--EQ
        C  + E  +H +W C  ++  W   + +      +   + +   +    +  + E+D  V  + LW+           +A P      RF+ + ++  ++
Subjt:  CRCKEESTSHLVWECKFSKSVWLKFLPTLSNFFNVCRPNWDALTFWEGLMGRLGEEDTCVAALILWK-----------EANPDQNQISRFIEASIS--EQ

Query:  LKVR----------VTNLDARRSKNQRSQASW-SPPHLFLKLNVDASWTSSANVGGVRWVVRDSSGSLVIAGCKREERNWSILTAEASAMREGLFNFLKH
        +K R          V   D  + K Q   A W  PP  ++KLNVD S+    N+G +  ++R+S+G ++ A C   E+  S L AE  A +EG+   L+ 
Subjt:  LKVR----------VTNLDARRSKNQRSQASW-SPPHLFLKLNVDASWTSSANVGGVRWVVRDSSGSLVIAGCKREERNWSILTAEASAMREGLFNFLKH

Query:  SAWISTPLIVESDSSSLIKILQGLEVDLSEVKNIVDEIEDMAREVTEIQFVWCPRSCNQITHVLAQKAGSVGSMCF
          W   P+I+ESD +  ++++       S  K +V EI+ M +   E++     R+CN I+HVLA K      M F
Subjt:  SAWISTPLIVESDSSSLIKILQGLEVDLSEVKNIVDEIEDMAREVTEIQFVWCPRSCNQITHVLAQKAGSVGSMCF

BBH00303.1 Ribonuclease H-like superfamily protein [Prunus dulcis]9.8e-3528.35Show/hide
Query:  MIKSCFPTEVVEDILSIPLGRSQSKDEIIWAEHPKGAFTVKSAYHLAMNLEDLKQ------ASSSDNSNLKRLWRNFWNLKIIPRVKICVWKLLNNIIPT
        +I   F    V  I S+P+ R    D ++W  H +GA+TV+S Y LA+ L+   +         S   N+  +W+  W L+I P+++  +WK   N +  
Subjt:  MIKSCFPTEVVEDILSIPLGRSQSKDEIIWAEHPKGAFTVKSAYHLAMNLEDLKQ------ASSSDNSNLKRLWRNFWNLKIIPRVKICVWKLLNNIIPT

Query:  KVNLLSKGIDTNLLCLFCRCKEESTSHLVWECKFSKSVW----LKF-LPTLSNFFNVCRPNWDALTFWEGLMGRLGEEDTCVAALILWKEANPDQNQISR
        + NL  + +  +  C FC  ++E+  HL + C F++++W    L+F + TL     + R  W  L  +    GR+ EE   + A +LW+        +  
Subjt:  KVNLLSKGIDTNLLCLFCRCKEESTSHLVWECKFSKSVW----LKF-LPTLSNFFNVCRPNWDALTFWEGLMGRLGEEDTCVAALILWKEANPDQNQISR

Query:  FIEASISEQLKVRVTNLDARRSKNQR-----------------SQASW-SPPHLFLKLNVDASWTSSANVGGVRWVVRDSSGSLVIAGCKREERNWSILT
         +     + + + +T +D     N                   +   W SPP   +KLN D +W +    GGV WV+RD  G  + AG   + R  S L 
Subjt:  FIEASISEQLKVRVTNLDARRSKNQR-----------------SQASW-SPPHLFLKLNVDASWTSSANVGGVRWVVRDSSGSLVIAGCKREERNWSILT

Query:  AEASAMREGLFNFLKHSAWISTPLIVESDSSSLIKILQGLEVDLSEVKNIVDEIEDMAREVTEIQFVWCPRSCNQITHVLAQKAGSVG
        AEA A+RE L   L+        + VESDS SLIK+L   +V   E++ I+ ++  ++     ++F++ PR CNQ  H +A  A  +G
Subjt:  AEASAMREGLFNFLKHSAWISTPLIVESDSSSLIKILQGLEVDLSEVKNIVDEIEDMAREVTEIQFVWCPRSCNQITHVLAQKAGSVG

CAB4273082.1 unnamed protein product [Prunus armeniaca]6.1e-3728.32Show/hide
Query:  MIKSCFPTEVVEDILSIPLGRSQSKDEIIWAEHPKGAFTVKSAYHLAMNLE------DLKQASSSDNSNLKRLWRNFWNLKIIPRVKICVWKLLNNIIPT
        ++  CF     + I +IP+ R    D+ +W     G +TV+S Y +A+ L          +  SS     +R+W++ W L++ P+++  +WK   N++  
Subjt:  MIKSCFPTEVVEDILSIPLGRSQSKDEIIWAEHPKGAFTVKSAYHLAMNLE------DLKQASSSDNSNLKRLWRNFWNLKIIPRVKICVWKLLNNIIPT

Query:  KVNLLSKGIDTNLLCLFCRCKEESTSHLVWECKFSKSVW------LKFLPTLSNFFNVCRPNWDALTFWEGLMGRLGEEDTC-----VAALILWK-----
        K NLL +GID    C  C  + ES  H+ ++C+F++ +W      L     L   F VC         WE L+ +  + + C     V A  LW+     
Subjt:  KVNLLSKGIDTNLLCLFCRCKEESTSHLVWECKFSKSVW------LKFLPTLSNFFNVCRPNWDALTFWEGLMGRLGEEDTC-----VAALILWK-----

Query:  -----EANPDQNQISRFIEASISEQLKVRVTNLDARRSKNQ---------RSQASW-SPPHLFLKLNVDASWTSSANVGGVRWVVRDSSGSLVIAGCKRE
             E    +  ++  +E  + +  + R   +  +   N+          +  SW  PP+  LK+N DA+W S   +GGV WVVRDS G +V AG K +
Subjt:  -----EANPDQNQISRFIEASISEQLKVRVTNLDARRSKNQ---------RSQASW-SPPHLFLKLNVDASWTSSANVGGVRWVVRDSSGSLVIAGCKRE

Query:  ERNWSILTAEASAMREGLFNFLKHSAWISTPLIVESDSSSLIKILQG-LEVDLSEVKNIVDEIEDMAREVTEIQFVWCPRSCNQITHVLAQKAGSVGSM
         R  S L  EA A+RE L   ++      + L VESDS  +I+++ G   +D++ V  IV +I+ +  +     F++ PR+CN+  H +A     VG +
Subjt:  ERNWSILTAEASAMREGLFNFLKHSAWISTPLIVESDSSSLIKILQG-LEVDLSEVKNIVDEIEDMAREVTEIQFVWCPRSCNQITHVLAQKAGSVGSM

CAB4274760.1 unnamed protein product [Prunus armeniaca]3.7e-3428.68Show/hide
Query:  MIKSCFPTEVVEDILSIPLGRSQSKDEIIWAEHPKGAFTVKSAYHLAMNLEDLKQ------ASSSDNSNLKRLWRNFWNLKIIPRVKICVWKLLNNIIPT
        ++  CF  E    ILSIP+ R    D++IW  +  G +TV+S Y LA++L+   +        +S +S+   +W++ W++   P++K  +W   +NI+  
Subjt:  MIKSCFPTEVVEDILSIPLGRSQSKDEIIWAEHPKGAFTVKSAYHLAMNLEDLKQ------ASSSDNSNLKRLWRNFWNLKIIPRVKICVWKLLNNIIPT

Query:  KVNLLSKGIDTNLLCLFCRCKEESTSHLVWECKFSKSVWLKFLPTLSNFFNVCR-PNWDALTFWEGLMGRLGEEDTCVAAL--------ILWKEAN----
        + NL  + +     C FC  ++E+ +H+ +EC F+++ W  F   L    +V +    D ++ W+ +M  L   +    A+         +WK  N    
Subjt:  KVNLLSKGIDTNLLCLFCRCKEESTSHLVWECKFSKSVWLKFLPTLSNFFNVCR-PNWDALTFWEGLMGRLGEEDTCVAAL--------ILWKEAN----

Query:  ----PDQNQISRFIEASISE--QLKVRVTNLDARRSKNQRSQA--SWSPPHL-FLKLNVDASWTSSANVGGVRWVVRDSSGSLVIAGCKREERNWSILTA
             D  ++   +   +SE    K  + +L  +  +   S A  SW  P L  LK+N DA+W++    GGV WV+RDS G L+ AG + +    S +  
Subjt:  ----PDQNQISRFIEASISE--QLKVRVTNLDARRSKNQRSQA--SWSPPHL-FLKLNVDASWTSSANVGGVRWVVRDSSGSLVIAGCKREERNWSILTA

Query:  EASAMREGLFNFLKHSAWISTPLIVESDSSSLIKILQGLEVDLSEVKNIVDEIEDMAREVTEIQFVWCPRSCNQITHVLAQKAGSVG
        E  A+R  L           T +IVESDS   I +L G     S+++ IV +I  +   ++ + FV+ PRSCNQ  H +A  A   G
Subjt:  EASAMREGLFNFLKHSAWISTPLIVESDSSSLIKILQGLEVDLSEVKNIVDEIEDMAREVTEIQFVWCPRSCNQITHVLAQKAGSVG

CAB4303756.1 unnamed protein product [Prunus armeniaca]2.2e-3428.38Show/hide
Query:  MIKSCFPTEVVEDILSIPLGRSQSKDEIIWAEHPKGAFTVKSAYHLAMNLEDLKQ------ASSSDNSNLKRLWRNFWNLKIIPRVKICVWKLLNNIIPT
        +I  CF  E    ILSIP+ R    D++IW     G +TV+S Y LA++L+   +        +S +S+   +W++ W++   P++K  +W+  +NI+  
Subjt:  MIKSCFPTEVVEDILSIPLGRSQSKDEIIWAEHPKGAFTVKSAYHLAMNLEDLKQ------ASSSDNSNLKRLWRNFWNLKIIPRVKICVWKLLNNIIPT

Query:  KVNLLSKGIDTNLLCLFCRCKEESTSHLVWECKFSKSVWLKFLPTLSNFFNVCR-PNWDALTFWEGLMGRLGEEDTCVAALI-----LWKEANPDQNQIS
        + NL  + +     C FC  ++E+ +H+ +EC F+++ W  F   L    +V +    D ++ W+ +M  L   +    A+      LW+        + 
Subjt:  KVNLLSKGIDTNLLCLFCRCKEESTSHLVWECKFSKSVWLKFLPTLSNFFNVCR-PNWDALTFWEGLMGRLGEEDTCVAALI-----LWKEANPDQNQIS

Query:  RFIEASISEQLKVRVTNLDARRSKNQRSQ------------ASW-SPPHLFLKLNVDASWTSSANVGGVRWVVRDSSGSLVIAGCKREERNWSILTAEAS
          ++A  +E + + +  +   R+  Q  Q             SW  PP   LK+N DA+W++    GGV WV+RDS G L+ AG + +    S +  E  
Subjt:  RFIEASISEQLKVRVTNLDARRSKNQRSQ------------ASW-SPPHLFLKLNVDASWTSSANVGGVRWVVRDSSGSLVIAGCKREERNWSILTAEAS

Query:  AMREGLFNFLKHSAWISTPLIVESDSSSLIKILQGLEVDLSEVKNIVDEIEDMAREVTEIQFVWCPRSCNQITHVLA
        A+R  L           T +IVESDS   I +L G     S+++ IV +I  +   ++ + FV+ PRSCNQ  H +A
Subjt:  AMREGLFNFLKHSAWISTPLIVESDSSSLIKILQGLEVDLSEVKNIVDEIEDMAREVTEIQFVWCPRSCNQITHVLA

TrEMBL top hitse value%identityAlignment
A0A2N9HW96 Reverse transcriptase domain-containing protein2.1e-3531.14Show/hide
Query:  MIKSCFPTEVVEDILSIPLGRSQSKDEIIWAEHPKGAFTVKSAYHLAMNLEDLKQASSSDNSNLKRLWRNFWNLKIIPRVKICVWKLLNNIIPTKVNLLS
        +I + F     + I SIPL R  S D IIW+E   G ++V+SAYHL M  +  K   SS+NS +  LW+  WN  +  ++K+ +WK   NI+PTK+NL  
Subjt:  MIKSCFPTEVVEDILSIPLGRSQSKDEIIWAEHPKGAFTVKSAYHLAMNLEDLKQASSSDNSNLKRLWRNFWNLKIIPRVKICVWKLLNNIIPTKVNLLS

Query:  KGIDTNLLCLFCRCKEESTSHLVWECKFSKSVW-LKFL------PTLSNFFNVCRPNWDALTFWEGLMGRLGEEDTCVAALILWK--EANPDQNQISRFI
        K    ++ C  C    ES  H++ +CKF++ VW L  L      P   NF +       +LT            D  +   I WK   A  D+   ++F+
Subjt:  KGIDTNLLCLFCRCKEESTSHLVWECKFSKSVW-LKFL------PTLSNFFNVCRPNWDALTFWEGLMGRLGEEDTCVAALILWK--EANPDQNQISRFI

Query:  EAS---------ISEQLKVRVTNLDARRSKNQRSQASWSPP-HLFLKLNVDASWTSSANVGGVRWVVRDSSGSLVIAGCKREERNWSILTAEASAMREGL
         A          +S+ L    T+ D    +  R    W+PP     K+NV   W S  + GG   V+RDSSGS++ A C    +    L   A A+++ L
Subjt:  EAS---------ISEQLKVRVTNLDARRSKNQRSQASWSPP-HLFLKLNVDASWTSSANVGGVRWVVRDSSGSLVIAGCKREERNWSILTAEASAMREGL

Query:  FNFLKHSAWIST-----PLIVESDSSSLIKILQGLEVDLSEVKNIVDEIEDMAREVTEIQFVWCPRSCNQITHVLAQKAGSVGS--MCFSSNVFF
                W++       LIVE D S+L+  L+     L+    +VDEI++++       F   PRSCN ++  LA+++ S  S  M  S N F+
Subjt:  FNFLKHSAWIST-----PLIVESDSSSLIKILQGLEVDLSEVKNIVDEIEDMAREVTEIQFVWCPRSCNQITHVLAQKAGSVGS--MCFSSNVFF

A0A4Y1R838 Ribonuclease H-like superfamily protein4.7e-3528.35Show/hide
Query:  MIKSCFPTEVVEDILSIPLGRSQSKDEIIWAEHPKGAFTVKSAYHLAMNLEDLKQ------ASSSDNSNLKRLWRNFWNLKIIPRVKICVWKLLNNIIPT
        +I   F    V  I S+P+ R    D ++W  H +GA+TV+S Y LA+ L+   +         S   N+  +W+  W L+I P+++  +WK   N +  
Subjt:  MIKSCFPTEVVEDILSIPLGRSQSKDEIIWAEHPKGAFTVKSAYHLAMNLEDLKQ------ASSSDNSNLKRLWRNFWNLKIIPRVKICVWKLLNNIIPT

Query:  KVNLLSKGIDTNLLCLFCRCKEESTSHLVWECKFSKSVW----LKF-LPTLSNFFNVCRPNWDALTFWEGLMGRLGEEDTCVAALILWKEANPDQNQISR
        + NL  + +  +  C FC  ++E+  HL + C F++++W    L+F + TL     + R  W  L  +    GR+ EE   + A +LW+        +  
Subjt:  KVNLLSKGIDTNLLCLFCRCKEESTSHLVWECKFSKSVW----LKF-LPTLSNFFNVCRPNWDALTFWEGLMGRLGEEDTCVAALILWKEANPDQNQISR

Query:  FIEASISEQLKVRVTNLDARRSKNQR-----------------SQASW-SPPHLFLKLNVDASWTSSANVGGVRWVVRDSSGSLVIAGCKREERNWSILT
         +     + + + +T +D     N                   +   W SPP   +KLN D +W +    GGV WV+RD  G  + AG   + R  S L 
Subjt:  FIEASISEQLKVRVTNLDARRSKNQR-----------------SQASW-SPPHLFLKLNVDASWTSSANVGGVRWVVRDSSGSLVIAGCKREERNWSILT

Query:  AEASAMREGLFNFLKHSAWISTPLIVESDSSSLIKILQGLEVDLSEVKNIVDEIEDMAREVTEIQFVWCPRSCNQITHVLAQKAGSVG
        AEA A+RE L   L+        + VESDS SLIK+L   +V   E++ I+ ++  ++     ++F++ PR CNQ  H +A  A  +G
Subjt:  AEASAMREGLFNFLKHSAWISTPLIVESDSSSLIKILQGLEVDLSEVKNIVDEIEDMAREVTEIQFVWCPRSCNQITHVLAQKAGSVG

A0A6J5UAY2 Reverse transcriptase domain-containing protein3.0e-3728.32Show/hide
Query:  MIKSCFPTEVVEDILSIPLGRSQSKDEIIWAEHPKGAFTVKSAYHLAMNLE------DLKQASSSDNSNLKRLWRNFWNLKIIPRVKICVWKLLNNIIPT
        ++  CF     + I +IP+ R    D+ +W     G +TV+S Y +A+ L          +  SS     +R+W++ W L++ P+++  +WK   N++  
Subjt:  MIKSCFPTEVVEDILSIPLGRSQSKDEIIWAEHPKGAFTVKSAYHLAMNLE------DLKQASSSDNSNLKRLWRNFWNLKIIPRVKICVWKLLNNIIPT

Query:  KVNLLSKGIDTNLLCLFCRCKEESTSHLVWECKFSKSVW------LKFLPTLSNFFNVCRPNWDALTFWEGLMGRLGEEDTC-----VAALILWK-----
        K NLL +GID    C  C  + ES  H+ ++C+F++ +W      L     L   F VC         WE L+ +  + + C     V A  LW+     
Subjt:  KVNLLSKGIDTNLLCLFCRCKEESTSHLVWECKFSKSVW------LKFLPTLSNFFNVCRPNWDALTFWEGLMGRLGEEDTC-----VAALILWK-----

Query:  -----EANPDQNQISRFIEASISEQLKVRVTNLDARRSKNQ---------RSQASW-SPPHLFLKLNVDASWTSSANVGGVRWVVRDSSGSLVIAGCKRE
             E    +  ++  +E  + +  + R   +  +   N+          +  SW  PP+  LK+N DA+W S   +GGV WVVRDS G +V AG K +
Subjt:  -----EANPDQNQISRFIEASISEQLKVRVTNLDARRSKNQ---------RSQASW-SPPHLFLKLNVDASWTSSANVGGVRWVVRDSSGSLVIAGCKRE

Query:  ERNWSILTAEASAMREGLFNFLKHSAWISTPLIVESDSSSLIKILQG-LEVDLSEVKNIVDEIEDMAREVTEIQFVWCPRSCNQITHVLAQKAGSVGSM
         R  S L  EA A+RE L   ++      + L VESDS  +I+++ G   +D++ V  IV +I+ +  +     F++ PR+CN+  H +A     VG +
Subjt:  ERNWSILTAEASAMREGLFNFLKHSAWISTPLIVESDSSSLIKILQG-LEVDLSEVKNIVDEIEDMAREVTEIQFVWCPRSCNQITHVLAQKAGSVGSM

A0A6J5WPU6 Reverse transcriptase domain-containing protein1.1e-3428.38Show/hide
Query:  MIKSCFPTEVVEDILSIPLGRSQSKDEIIWAEHPKGAFTVKSAYHLAMNLEDLKQ------ASSSDNSNLKRLWRNFWNLKIIPRVKICVWKLLNNIIPT
        +I  CF  E    ILSIP+ R    D++IW     G +TV+S Y LA++L+   +        +S +S+   +W++ W++   P++K  +W+  +NI+  
Subjt:  MIKSCFPTEVVEDILSIPLGRSQSKDEIIWAEHPKGAFTVKSAYHLAMNLEDLKQ------ASSSDNSNLKRLWRNFWNLKIIPRVKICVWKLLNNIIPT

Query:  KVNLLSKGIDTNLLCLFCRCKEESTSHLVWECKFSKSVWLKFLPTLSNFFNVCR-PNWDALTFWEGLMGRLGEEDTCVAALI-----LWKEANPDQNQIS
        + NL  + +     C FC  ++E+ +H+ +EC F+++ W  F   L    +V +    D ++ W+ +M  L   +    A+      LW+        + 
Subjt:  KVNLLSKGIDTNLLCLFCRCKEESTSHLVWECKFSKSVWLKFLPTLSNFFNVCR-PNWDALTFWEGLMGRLGEEDTCVAALI-----LWKEANPDQNQIS

Query:  RFIEASISEQLKVRVTNLDARRSKNQRSQ------------ASW-SPPHLFLKLNVDASWTSSANVGGVRWVVRDSSGSLVIAGCKREERNWSILTAEAS
          ++A  +E + + +  +   R+  Q  Q             SW  PP   LK+N DA+W++    GGV WV+RDS G L+ AG + +    S +  E  
Subjt:  RFIEASISEQLKVRVTNLDARRSKNQRSQ------------ASW-SPPHLFLKLNVDASWTSSANVGGVRWVVRDSSGSLVIAGCKREERNWSILTAEAS

Query:  AMREGLFNFLKHSAWISTPLIVESDSSSLIKILQGLEVDLSEVKNIVDEIEDMAREVTEIQFVWCPRSCNQITHVLA
        A+R  L           T +IVESDS   I +L G     S+++ IV +I  +   ++ + FV+ PRSCNQ  H +A
Subjt:  AMREGLFNFLKHSAWISTPLIVESDSSSLIKILQGLEVDLSEVKNIVDEIEDMAREVTEIQFVWCPRSCNQITHVLA

Q2QNX8 Retrotransposon protein, putative, unclassified4.7e-3527.93Show/hide
Query:  EDILSIPLGRSQSKDEIIWAEHPKGAFTVKSAYHLAMNLEDLKQASSSDNSNLKRLWRNFWNLKIIPRVKICVWKLLNNIIPTKVNLLSKGIDTNLLCLF
        E I SI L   Q +D I W     G F+++SAY LA+ L +  ++SSS  ++ K++W + W   I  +VK+  W+ ++N +PT VN   +  + + +C F
Subjt:  EDILSIPLGRSQSKDEIIWAEHPKGAFTVKSAYHLAMNLEDLKQASSSDNSNLKRLWRNFWNLKIIPRVKICVWKLLNNIIPTKVNLLSKGIDTNLLCLF

Query:  CRCKEESTSHLVWECKFSKSVWLKFLPTLSNFFNVCRPNWDALTFWEGLMGRLGEEDTCVAALILWK-----------EANPDQNQISRFIEASIS--EQ
        C  + E  +H +W C  ++  W   + +      +   + +   +    +  + E+D  V  + LW+           +A P      RF+ + ++  ++
Subjt:  CRCKEESTSHLVWECKFSKSVWLKFLPTLSNFFNVCRPNWDALTFWEGLMGRLGEEDTCVAALILWK-----------EANPDQNQISRFIEASIS--EQ

Query:  LKVR----------VTNLDARRSKNQRSQASW-SPPHLFLKLNVDASWTSSANVGGVRWVVRDSSGSLVIAGCKREERNWSILTAEASAMREGLFNFLKH
        +K R          V   D  + K Q   A W  PP  ++KLNVD S+    N+G +  ++R+S+G ++ A C   E+  S L AE  A +EG+   L+ 
Subjt:  LKVR----------VTNLDARRSKNQRSQASW-SPPHLFLKLNVDASWTSSANVGGVRWVVRDSSGSLVIAGCKREERNWSILTAEASAMREGLFNFLKH

Query:  SAWISTPLIVESDSSSLIKILQGLEVDLSEVKNIVDEIEDMAREVTEIQFVWCPRSCNQITHVLAQKAGSVGSMCF
          W   P+I+ESD +  ++++       S  K +V EI+ M +   E++     R+CN I+HVLA K      M F
Subjt:  SAWISTPLIVESDSSSLIKILQGLEVDLSEVKNIVDEIEDMAREVTEIQFVWCPRSCNQITHVLAQKAGSVGSMCF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G02650.1 Ribonuclease H-like superfamily protein2.0e-1421.1Show/hide
Query:  VKSAYHLAMNLEDLKQASSSDNSNLKRLWRNFWNLKIIPRVKICVWKLLNNIIPTKVNLLSKGIDTNLLCLFCRCKEESTSHLVWECKFSKSVWLKFLPT
        ++S Y +A + + L++ +         + +  W L + P++K  +W+ +   + T   L S+ ID + +C  C  +EE+  H+++ C +++SVW      
Subjt:  VKSAYHLAMNLEDLKQASSSDNSNLKRLWRNFWNLKIIPRVKICVWKLLNNIIPTKVNLLSKGIDTNLLCLFCRCKEESTSHLVWECKFSKSVWLKFLPT

Query:  LSNFFNVCRPNWDALTFWEGLMGRL---------GEEDTCVAALILWK-------------------EANPDQNQISRFIEAS-ISEQLKVRVTNLDARR
        + N        W   + +E  + RL            D  +   I+W+                   EA       + ++ A+  +E   V V     + 
Subjt:  LSNFFNVCRPNWDALTFWEGLMGRL---------GEEDTCVAALILWK-------------------EANPDQNQISRFIEAS-ISEQLKVRVTNLDARR

Query:  SKNQRSQASWS-PPHLFLKLNVDASWTSSANVGGVRWVVRDSSGSLVIAGCKREERNWSILTAEASAMREGLFNFLKHS---AWISTPLIVESDSSSLIK
        S+   SQ  W+ PP  ++K N D+ +T  +      W +R+ +G +V+ G  + + +   L AEA      L     H     W       ESDS SL+ 
Subjt:  SKNQRSQASWS-PPHLFLKLNVDASWTSSANVGGVRWVVRDSSGSLVIAGCKREERNWSILTAEASAMREGLFNFLKHS---AWISTPLIVESDSSSLIK

Query:  ILQGLEVDLSEVKNIVDEIEDMAREVTEIQFVWCPRSCNQITHVLA
        ++   E D S +  ++ +I     ++      +  R  N     LA
Subjt:  ILQGLEVDLSEVKNIVDEIEDMAREVTEIQFVWCPRSCNQITHVLA

AT3G09510.1 Ribonuclease H-like superfamily protein7.3e-2024.06Show/hide
Query:  IPLGRSQSKDEIIWAEHPKGAFTVKSAYHLAMNLEDLKQASSSDNSNLKRLWRNFWNLKIIPRVKICVWKLLNNIIPTKVNLLSKGIDTNLLCLFCRCKE
        I L +S+  D+IIW  +  G +TV+S Y L  +       + +       L    WNL I+P++K  +W+ L+  + T   L ++G+  +  C  C  + 
Subjt:  IPLGRSQSKDEIIWAEHPKGAFTVKSAYHLAMNLEDLKQASSSDNSNLKRLWRNFWNLKIIPRVKICVWKLLNNIIPTKVNLLSKGIDTNLLCLFCRCKE

Query:  ESTSHLVWECKFSKSVWLKFLPTLSNFFNVCRPNWDALTFWEGLMGRLG-EEDTCVA-------ALILWKEANPDQNQI-SRFIEASISEQLKVRVTN--
        ES +H ++ C F+   W      LS+  ++ R    +  F E +   L   +DT ++         ++W+      N + ++F E+     L  +     
Subjt:  ESTSHLVWECKFSKSVWLKFLPTLSNFFNVCRPNWDALTFWEGLMGRLG-EEDTCVA-------ALILWKEANPDQNQI-SRFIEASISEQLKVRVTN--

Query:  -LDARRSKNQ---------RSQASW-SPPHLFLKLNVDASWTSSANVGGVRWVVRDSSGSLVIAGCKREERNWSILTAEASAMREGLFNFLKHSAWIS--
         L+A +S  +          ++  W +PP  ++K N DA +          W++R+  G+ +  G  +     + L AE  A+   L        WI   
Subjt:  -LDARRSKNQ---------RSQASW-SPPHLFLKLNVDASWTSSANVGGVRWVVRDSSGSLVIAGCKREERNWSILTAEASAMREGLFNFLKHSAWIS--

Query:  TPLIVESDSSSLIKILQGLEVDLSEVKNIVDEIEDMAREVTEIQFVWCPRSCNQITHVLAQKAGSVGSMCFSSN
        T + +E D  +LI ++ G+    S + N +++I   A +   IQF +  R  N++ HVLA K G   S  +S +
Subjt:  TPLIVESDSSSLIKILQGLEVDLSEVKNIVDEIEDMAREVTEIQFVWCPRSCNQITHVLAQKAGSVGSMCFSSN

AT3G26855.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.4e-0737.7Show/hide
Query:  NFWNLKIIPRVKICVWKLLNNIIPTKVNLLSKGIDTNLLCLFCRCKEESTSHLVWECKFSK
        + W+LKI P++K+ +WK LNN +P    LLS+ I     C  CR   E+ +H+++ C F++
Subjt:  NFWNLKIIPRVKICVWKLLNNIIPTKVNLLSKGIDTNLLCLFCRCKEESTSHLVWECKFSK

AT4G09775.1 BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT2G02650.1)1.1e-0727.27Show/hide
Query:  WKEANPDQNQISRFIEASISEQLKVRVTNLDARRSKNQRSQASWS-PPHLFLKLNVDASWTSSANVGGVRWVVRDSSGSLVIAGCKREERNWSILTAEA
        WK A   + + + ++E +I++      T     R   +  +  WS PP  +LK N D+ +    +     W++RDS+G ++ +GC + ++++S L AEA
Subjt:  WKEANPDQNQISRFIEASISEQLKVRVTNLDARRSKNQRSQASWS-PPHLFLKLNVDASWTSSANVGGVRWVVRDSSGSLVIAGCKREERNWSILTAEA

AT4G29090.1 Ribonuclease H-like superfamily protein3.4e-2524.14Show/hide
Query:  MIKSCFPTEVVEDILSIPLGRSQSKDEIIWAEHPKGAFTVKSAYHLAMNLEDLKQASSSDNS--NLKRLWRNFWNLKIIPRVKICVWKLLNNIIPTKVNL
        +I+  FP    + I  +  G  +  D   W     G +TVKS Y +   + + K++S  + S  +L  +++  W  +  P+++  +WK L+N +P    L
Subjt:  MIKSCFPTEVVEDILSIPLGRSQSKDEIIWAEHPKGAFTVKSAYHLAMNLEDLKQASSSDNS--NLKRLWRNFWNLKIIPRVKICVWKLLNNIIPTKVNL

Query:  LSKGIDTNLLCLFCRCKEESTSHLVWECKFSKSVWLKFLPTLSNFFNVCRPNW-DAL---TFWEGLMGRLGEEDTCVAALI------LWKEANP------
          + +     C+ C   +E+ +HL+++C F++  W      +S+        W D++    +W   +G    +    + L+      LWK  N       
Subjt:  LSKGIDTNLLCLFCRCKEESTSHLVWECKFSKSVWLKFLPTLSNFFNVCRPNW-DAL---TFWEGLMGRLGEEDTCVAALI------LWKEANP------

Query:  --DQNQISRFIEASISE-QLKVRVTNLDARRSKNQRSQASW-SPPHLFLKLNVDASWTSSANVGGVRWVVRDSSGSLVIAGCKREERNWSILTAEASAMR
          +  ++ R  E  + E +++    +   +   N+ S   W  PPH ++K N DA+W       G+ WV+R+  G +   G +   +  S+L AE  AMR
Subjt:  --DQNQISRFIEASISE-QLKVRVTNLDARRSKNQRSQASW-SPPHLFLKLNVDASWTSSANVGGVRWVVRDSSGSLVIAGCKREERNWSILTAEASAMR

Query:  EGLFNFLKHSAWISTPLIVESDSSSLIKILQGLEVDLSEVKNIVDEIEDMAREVTEIQFVWCPRSCNQITHVLAQKA
           +  L  S +    +I ESDS  LI+IL   E+    +K  + +++ +  + TE++FV+ PR  N +   +A+++
Subjt:  EGLFNFLKHSAWISTPLIVESDSSSLIKILQGLEVDLSEVKNIVDEIEDMAREVTEIQFVWCPRSCNQITHVLAQKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTAAGAGTTGTTTTCCTACCGAAGTGGTTGAAGATATTCTAAGTATCCCCCTTGGGAGGAGCCAATCCAAAGACGAAATTATTTGGGCAGAGCACCCCAAGGGAGC
CTTCACAGTCAAATCCGCATACCATTTGGCTATGAATCTAGAGGATCTAAAGCAGGCTAGCAGCTCCGATAATTCCAACTTAAAGAGGCTGTGGAGGAATTTCTGGAACC
TTAAAATCATCCCAAGAGTTAAAATTTGTGTGTGGAAATTGCTAAACAACATCATTCCAACGAAAGTGAATCTTTTATCGAAAGGCATTGATACTAACTTACTATGCCTG
TTTTGCAGGTGCAAGGAGGAGTCTACAAGCCATCTAGTGTGGGAATGCAAGTTCTCCAAGTCTGTTTGGTTAAAATTTCTGCCTACCTTATCTAATTTTTTCAATGTTTG
TAGGCCGAATTGGGATGCACTCACATTCTGGGAAGGGCTCATGGGTAGGCTCGGGGAGGAAGACACATGTGTCGCTGCGTTAATTCTATGGAAAGAAGCTAACCCAGACC
AGAACCAAATCTCAAGATTTATTGAAGCTAGCATTTCTGAGCAACTCAAGGTTAGAGTTACTAACTTGGATGCTCGAAGGTCGAAGAATCAGCGGAGTCAGGCATCTTGG
TCCCCCCCTCATCTGTTCCTGAAGTTGAACGTTGATGCTTCATGGACCAGCTCGGCGAACGTTGGGGGCGTTCGGTGGGTAGTGCGTGACTCCTCCGGGTCTTTGGTTAT
AGCCGGCTGCAAGAGGGAGGAGAGGAATTGGAGCATTCTCACGGCAGAAGCTTCTGCGATGCGAGAAGGCCTTTTCAACTTTCTGAAACATAGTGCATGGATCTCCACCC
CGCTCATTGTGGAGTCTGATTCGAGCTCTTTGATTAAGATCCTGCAAGGGCTTGAGGTCGATCTCTCCGAGGTGAAGAACATTGTGGATGAGATCGAGGATATGGCGAGG
GAGGTGACCGAAATTCAATTCGTTTGGTGTCCGAGGAGCTGCAATCAAATAACTCATGTTCTTGCTCAAAAGGCTGGAAGCGTAGGTTCGATGTGTTTTTCATCGAATGT
GTTTTTCATCGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGATTAAGAGTTGTTTTCCTACCGAAGTGGTTGAAGATATTCTAAGTATCCCCCTTGGGAGGAGCCAATCCAAAGACGAAATTATTTGGGCAGAGCACCCCAAGGGAGC
CTTCACAGTCAAATCCGCATACCATTTGGCTATGAATCTAGAGGATCTAAAGCAGGCTAGCAGCTCCGATAATTCCAACTTAAAGAGGCTGTGGAGGAATTTCTGGAACC
TTAAAATCATCCCAAGAGTTAAAATTTGTGTGTGGAAATTGCTAAACAACATCATTCCAACGAAAGTGAATCTTTTATCGAAAGGCATTGATACTAACTTACTATGCCTG
TTTTGCAGGTGCAAGGAGGAGTCTACAAGCCATCTAGTGTGGGAATGCAAGTTCTCCAAGTCTGTTTGGTTAAAATTTCTGCCTACCTTATCTAATTTTTTCAATGTTTG
TAGGCCGAATTGGGATGCACTCACATTCTGGGAAGGGCTCATGGGTAGGCTCGGGGAGGAAGACACATGTGTCGCTGCGTTAATTCTATGGAAAGAAGCTAACCCAGACC
AGAACCAAATCTCAAGATTTATTGAAGCTAGCATTTCTGAGCAACTCAAGGTTAGAGTTACTAACTTGGATGCTCGAAGGTCGAAGAATCAGCGGAGTCAGGCATCTTGG
TCCCCCCCTCATCTGTTCCTGAAGTTGAACGTTGATGCTTCATGGACCAGCTCGGCGAACGTTGGGGGCGTTCGGTGGGTAGTGCGTGACTCCTCCGGGTCTTTGGTTAT
AGCCGGCTGCAAGAGGGAGGAGAGGAATTGGAGCATTCTCACGGCAGAAGCTTCTGCGATGCGAGAAGGCCTTTTCAACTTTCTGAAACATAGTGCATGGATCTCCACCC
CGCTCATTGTGGAGTCTGATTCGAGCTCTTTGATTAAGATCCTGCAAGGGCTTGAGGTCGATCTCTCCGAGGTGAAGAACATTGTGGATGAGATCGAGGATATGGCGAGG
GAGGTGACCGAAATTCAATTCGTTTGGTGTCCGAGGAGCTGCAATCAAATAACTCATGTTCTTGCTCAAAAGGCTGGAAGCGTAGGTTCGATGTGTTTTTCATCGAATGT
GTTTTTCATCGAATGA
Protein sequenceShow/hide protein sequence
MIKSCFPTEVVEDILSIPLGRSQSKDEIIWAEHPKGAFTVKSAYHLAMNLEDLKQASSSDNSNLKRLWRNFWNLKIIPRVKICVWKLLNNIIPTKVNLLSKGIDTNLLCL
FCRCKEESTSHLVWECKFSKSVWLKFLPTLSNFFNVCRPNWDALTFWEGLMGRLGEEDTCVAALILWKEANPDQNQISRFIEASISEQLKVRVTNLDARRSKNQRSQASW
SPPHLFLKLNVDASWTSSANVGGVRWVVRDSSGSLVIAGCKREERNWSILTAEASAMREGLFNFLKHSAWISTPLIVESDSSSLIKILQGLEVDLSEVKNIVDEIEDMAR
EVTEIQFVWCPRSCNQITHVLAQKAGSVGSMCFSSNVFFIE