| GenBank top hits | e value | %identity | Alignment |
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| KAA3473721.1 retroelement pol polyprotein-like [Gossypium australe] | 4.7e-69 | 66.67 | Show/hide |
Query: FARFGTPRALVSDEGTHFVNNILTKLLAKYGIKHRIATPYHPQANGQAEISNREIKSILKKVVHPSRKDWSFRLDEALWAFRTAYKTPLGMSPYRLVYGK
F RFGTPRA++SDEGTHFVN L LL K+G+KH++AT YHPQ NGQAE++N+EIK IL+KVV +++DWS RLD+ALWA++ YKTPLGMSPYRLV+GK
Subjt: FARFGTPRALVSDEGTHFVNNILTKLLAKYGIKHRIATPYHPQANGQAEISNREIKSILKKVVHPSRKDWSFRLDEALWAFRTAYKTPLGMSPYRLVYGK
Query: ACHLPLELEHKTFWALKKLNFDLSRAGAIRMLQLNELEEFRQFSYKNAKIYKEKTKLWHDKKIKSKEFDEKDGRVFKVNGQRVKHYWGE
ACHLPLELEH+ +WAL++LN DL A RMLQLNELEEFR FSY+NAK+ KE+ K WHDK I+ +EF+ G F+VN QR+KHY+GE
Subjt: ACHLPLELEHKTFWALKKLNFDLSRAGAIRMLQLNELEEFRQFSYKNAKIYKEKTKLWHDKKIKSKEFDEKDGRVFKVNGQRVKHYWGE
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| XP_017221472.1 PREDICTED: uncharacterized protein LOC108198219 [Daucus carota subsp. sativus] | 1.0e-71 | 59.83 | Show/hide |
Query: FARFGTPRALVSDEGTHFVNNILTKLLAKYGIKHRIATPYHPQANGQAEISNREIKSILKKVVHPSRKDWSFRLDEALWAFRTAYKTPLGMSPYRLVYGK
F RFGTPRA++SDEGTHFVN +L LAKY ++H++AT YHPQ NGQAE+SNREIK IL+KVV+P+RKDWS RLDEALWA+RTAYKTPLGMSPYRLV+GK
Subjt: FARFGTPRALVSDEGTHFVNNILTKLLAKYGIKHRIATPYHPQANGQAEISNREIKSILKKVVHPSRKDWSFRLDEALWAFRTAYKTPLGMSPYRLVYGK
Query: ACHLPLELEHKTFWALKKLNFDLSRAGAIRMLQLNELEEFRQFSYKNAKIYKEKTKLWHDKKIKSKEFD-------------------------------
ACHLP+ELEHK +WALK LNFD+ AG R LQL+EL+E R FSY+NAK+YKEKTK WHDK I+S+ F+
Subjt: ACHLPLELEHKTFWALKKLNFDLSRAGAIRMLQLNELEEFRQFSYKNAKIYKEKTKLWHDKKIKSKEFD-------------------------------
Query: ----------EKDGRVFKVNGQRVKHYWG
+ G FKVNGQR+KHYWG
Subjt: ----------EKDGRVFKVNGQRVKHYWG
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| XP_023521407.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111785222 [Cucurbita pepo subsp. pepo] | 1.2e-69 | 71.43 | Show/hide |
Query: FARFGTPRALVSDEGTHFVNNILTKLLAKYGIKHRIATPYHPQANGQAEISNREIKSILKKVVHPSRKDWSFRLDEALWAFRTAYKTPLGMSPYRLVYGK
F RFG PRAL+SDEGTHFVN ++ LL +Y +KHR+ATPYHPQ NGQAE+ N EIKSIL+KVV P+RKDWS +LD+A+WA+RTA+KTPLGMSPY+LV+GK
Subjt: FARFGTPRALVSDEGTHFVNNILTKLLAKYGIKHRIATPYHPQANGQAEISNREIKSILKKVVHPSRKDWSFRLDEALWAFRTAYKTPLGMSPYRLVYGK
Query: ACHLPLELEHKTFWALKKLNFDLSRAGAIRMLQLNELEEFRQFSYKNAKIYKEKTKLWHDKKIKSKEF--DEKDG
ACHLPLELEHK FWALKKLNFD + G +R +QLNELEEFR +Y+NAK+YKEKTK+WHD KI+ KEF D K G
Subjt: ACHLPLELEHKTFWALKKLNFDLSRAGAIRMLQLNELEEFRQFSYKNAKIYKEKTKLWHDKKIKSKEF--DEKDG
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| XP_023874613.1 uncharacterized protein LOC111987139 [Quercus suber] | 8.0e-69 | 55.36 | Show/hide |
Query: FARFGTPRALVSDEGTHFVNNILTKLLAKYGIKHRIATPYHPQANGQAEISNREIKSILKKVVHPSRKDWSFRLDEALWAFRTAYKTPLGMSPYRLVYGK
F RFGTPRA++SDEGTHF N + LL+KYG+KH+IA YHPQ NGQAEISNREIK+IL+K V+ +RKDW+ +LD+ALWA+RTA+KTP+GMSPYRLV+GK
Subjt: FARFGTPRALVSDEGTHFVNNILTKLLAKYGIKHRIATPYHPQANGQAEISNREIKSILKKVVHPSRKDWSFRLDEALWAFRTAYKTPLGMSPYRLVYGK
Query: ACHLPLELEHKTFWALKKLNFDLSRAGAIRMLQLNELEEFRQFSYKNAKIYKEKTKLWHDKKIKSKEF--------------------------------
ACHLP+ELEHK +WA+KK N DL AG R+LQLNE++EFR +Y+NAKIYKE+TK WHDK+I +EF
Subjt: ACHLPLELEHKTFWALKKLNFDLSRAGAIRMLQLNELEEFRQFSYKNAKIYKEKTKLWHDKKIKSKEF--------------------------------
Query: ---------DEKDGRVFKVNGQRVKHYWGEEFQ
+K G +F+VNGQR+KHY+GE+ +
Subjt: ---------DEKDGRVFKVNGQRVKHYWGEEFQ
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| XP_030478317.1 uncharacterized protein LOC115695391 [Cannabis sativa] | 5.9e-72 | 60.78 | Show/hide |
Query: FARFGTPRALVSDEGTHFVNNILTKLLAKYGIKHRIATPYHPQANGQAEISNREIKSILKKVVHPSRKDWSFRLDEALWAFRTAYKTPLGMSPYRLVYGK
F RFGTPRAL+SDEGTHFVN +L LLAKY +KH+IAT YHPQ NGQAEISNREIK IL+KVV+P+RKDWS RLD+ALWA+RTA+KTPLGMSPYRLVYGK
Subjt: FARFGTPRALVSDEGTHFVNNILTKLLAKYGIKHRIATPYHPQANGQAEISNREIKSILKKVVHPSRKDWSFRLDEALWAFRTAYKTPLGMSPYRLVYGK
Query: ACHLPLELEHKTFWALKKLNFDLSRAGAIRMLQLNELEEFRQFSYKNAKIYKEKTKLWHDKKIKSKEFD-------------------------------
ACHLP+ELEHK +WA KKLN DL AG R LQLNELEE R FSY+NAK+YKE TK WHDK+I+ + F+
Subjt: ACHLPLELEHKTFWALKKLNFDLSRAGAIRMLQLNELEEFRQFSYKNAKIYKEKTKLWHDKKIKSKEFD-------------------------------
Query: -----------EKDGRVFKVNGQRVKHYWGEE
E+ + FKVNGQR+KHY G E
Subjt: -----------EKDGRVFKVNGQRVKHYWGEE
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2G9FWY3 Reverse transcriptase | 7.3e-68 | 45.34 | Show/hide |
Query: DRVLLAFAVLRSMSIDVGKIISTEIADCWRKKAF-PVFPD----------DLFNPWIPPPPVEREEENDDEEQVAR------FARFGTPRALVSDEGTHF
DR + R + + I+ E+ D W P P D + W+ V N+D + V F RFGTPRA++SD GTHF
Subjt: DRVLLAFAVLRSMSIDVGKIISTEIADCWRKKAF-PVFPD----------DLFNPWIPPPPVEREEENDDEEQVAR------FARFGTPRALVSDEGTHF
Query: VNNILTKLLAKYGIKHRIATPYHPQANGQAEISNREIKSILKKVVHPSRKDWSFRLDEALWAFRTAYKTPLGMSPYRLVYGKACHLPLELEHKTFWALKK
N LL+KYG+KH+I+TPYHPQ +GQ E+SNREIK IL+K V +RKDWS RLDEALWA+RTAYKTP+GMSPYRLV+GKACHLP+ELEH +WA++K
Subjt: VNNILTKLLAKYGIKHRIATPYHPQANGQAEISNREIKSILKKVVHPSRKDWSFRLDEALWAFRTAYKTPLGMSPYRLVYGKACHLPLELEHKTFWALKK
Query: LNFDLSRAGAIRMLQLNELEEFRQFSYKNAKIYKEKTKLWHDKKIKSKEF-----------------------------------------DEKDGR-VF
LNFD+ AG R+LQLNEL+EFR +Y+NAKIYKEK K WH+KKI + F + K+ R F
Subjt: LNFDLSRAGAIRMLQLNELEEFRQFSYKNAKIYKEKTKLWHDKKIKSKEF-----------------------------------------DEKDGR-VF
Query: KVNGQRVKHYWGEEFQSKYPSL
KVN QR+KHYWGE ++ S+
Subjt: KVNGQRVKHYWGEEFQSKYPSL
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| A0A2G9HBV9 DNA-directed DNA polymerase | 8.1e-67 | 44.1 | Show/hide |
Query: DRVLLAFAVLRSMSIDVGKIISTEIADCWRKKAFPVFPD-----------DLFNPWIPPPPVEREEENDDEEQVAR------FARFGTPRALVSDEGTHF
DR + R + + I+ E+ D W +F D + W+ V N+D + V F RFGTPRA++S+ GTHF
Subjt: DRVLLAFAVLRSMSIDVGKIISTEIADCWRKKAFPVFPD-----------DLFNPWIPPPPVEREEENDDEEQVAR------FARFGTPRALVSDEGTHF
Query: VNNILTKLLAKYGIKHRIATPYHPQANGQAEISNREIKSILKKVVHPSRKDWSFRLDEALWAFRTAYKTPLGMSPYRLVYGKACHLPLELEHKTFWALKK
N LL+KYG+KH+I+TPYHPQ +GQ E+SNREIK IL+K V +RKDWS RLDEALWA+RTA+KTP+GMSPY+LV+GKACHLP+ELEH +WA++K
Subjt: VNNILTKLLAKYGIKHRIATPYHPQANGQAEISNREIKSILKKVVHPSRKDWSFRLDEALWAFRTAYKTPLGMSPYRLVYGKACHLPLELEHKTFWALKK
Query: LNFDLSRAGAIRMLQLNELEEFRQFSYKNAKIYKEKTKLWHDKKIKSKEFD------------------------------------------EKDGRVF
LNFD+ AG R+LQLNEL+EFR +Y+NAKIYKEKTK WHDKKI + F+ E F
Subjt: LNFDLSRAGAIRMLQLNELEEFRQFSYKNAKIYKEKTKLWHDKKIKSKEFD------------------------------------------EKDGRVF
Query: KVNGQRVKHYWGEEFQSKYPSL
KVN QR+KHYWG + S+
Subjt: KVNGQRVKHYWGEEFQSKYPSL
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| A0A2K3NJZ5 Integrase catalytic domain-containing protein (Fragment) | 2.1e-67 | 44.72 | Show/hide |
Query: DQLSAAVREDRVLLAFAVLRSMSIDVGKIISTEIADCWRKKAFPVFPD-----------DLFNPWIPPPPVEREEENDDEEQVA-----RFARFGTPRAL
D + R DR + + + ++ EI D W FP D + W+ + ND + V+ F+RFG PRAL
Subjt: DQLSAAVREDRVLLAFAVLRSMSIDVGKIISTEIADCWRKKAFPVFPD-----------DLFNPWIPPPPVEREEENDDEEQVA-----RFARFGTPRAL
Query: VSDEGTHFVNNILTKLLAKYGIKHRIATPYHPQANGQAEISNREIKSILKKVVHPSRKDWSFRLDEALWAFRTAYKTPLGMSPYRLVYGKACHLPLELEH
+SDEGTHF+N + LL KY + HRIATPYHPQ +GQ E+SNR+IK IL+K V+ SRKDWS +LD+ALWA+RTA+KTP+GMSP+++VYGK+CHLPLELEH
Subjt: VSDEGTHFVNNILTKLLAKYGIKHRIATPYHPQANGQAEISNREIKSILKKVVHPSRKDWSFRLDEALWAFRTAYKTPLGMSPYRLVYGKACHLPLELEH
Query: KTFWALKKLNFDLSRAGAIRMLQLNELEEFRQFSYKNAKIYKEKTKLWHDKKIKSKEF------------------------------------------
K WA K LNFDLS+AG R+LQL+EL+EFR F+Y+NAKI+KEKTK WHDKKI+++EF
Subjt: KTFWALKKLNFDLSRAGAIRMLQLNELEEFRQFSYKNAKIYKEKTKLWHDKKIKSKEF------------------------------------------
Query: DEKDGRVFKVNGQRVKHYWGEE
D + FKVNGQR+K Y+G+E
Subjt: DEKDGRVFKVNGQRVKHYWGEE
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| A0A4Y1R644 Transposable element protein | 4.7e-67 | 44 | Show/hide |
Query: DQLSAAVREDRVLLAFAVLRSMSIDVGKIISTEIADCWRKKAFPVFPD-----------DLFNPWIPPPPVEREEENDDEEQVAR------FARFGTPRA
D + V+ DR + R + + I+ E+ D W FP D + W+ + +D + V + F RFGTPRA
Subjt: DQLSAAVREDRVLLAFAVLRSMSIDVGKIISTEIADCWRKKAFPVFPD-----------DLFNPWIPPPPVEREEENDDEEQVAR------FARFGTPRA
Query: LVSDEGTHFVNNILTKLLAKYGIKHRIATPYHPQANGQAEISNREIKSILKKVVHPSRKDWSFRLDEALWAFRTAYKTPLGMSPYRLVYGKACHLPLELE
++SD G+HF N + L+ KY I HR++TPYHPQ +GQ EISNREIK IL+KVV+ +RKDW+ +L++ALWA+RTAYKTP+GMSPYRLV+GKACHLP+ELE
Subjt: LVSDEGTHFVNNILTKLLAKYGIKHRIATPYHPQANGQAEISNREIKSILKKVVHPSRKDWSFRLDEALWAFRTAYKTPLGMSPYRLVYGKACHLPLELE
Query: HKTFWALKKLNFDLSRAGAIRMLQLNELEEFRQFSYKNAKIYKEKTKLWHDKKIKSKEF---------------------------DEKDGRVFKVNGQR
H FWA+KKLNFDL +AG +R QLNELEE R SY+NAK+YKE+TK +HD+ I+ KEF + KDG FKVNGQR
Subjt: HKTFWALKKLNFDLSRAGAIRMLQLNELEEFRQFSYKNAKIYKEKTKLWHDKKIKSKEF---------------------------DEKDGRVFKVNGQR
Query: VKHYWGEEFQSKYPSLRNSVRFPNF
+K ++ E Q ++ + + FP++
Subjt: VKHYWGEEFQSKYPSLRNSVRFPNF
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| A0A5B6VWJ0 Retroelement pol polyprotein-like | 2.3e-69 | 66.67 | Show/hide |
Query: FARFGTPRALVSDEGTHFVNNILTKLLAKYGIKHRIATPYHPQANGQAEISNREIKSILKKVVHPSRKDWSFRLDEALWAFRTAYKTPLGMSPYRLVYGK
F RFGTPRA++SDEGTHFVN L LL K+G+KH++AT YHPQ NGQAE++N+EIK IL+KVV +++DWS RLD+ALWA++ YKTPLGMSPYRLV+GK
Subjt: FARFGTPRALVSDEGTHFVNNILTKLLAKYGIKHRIATPYHPQANGQAEISNREIKSILKKVVHPSRKDWSFRLDEALWAFRTAYKTPLGMSPYRLVYGK
Query: ACHLPLELEHKTFWALKKLNFDLSRAGAIRMLQLNELEEFRQFSYKNAKIYKEKTKLWHDKKIKSKEFDEKDGRVFKVNGQRVKHYWGE
ACHLPLELEH+ +WAL++LN DL A RMLQLNELEEFR FSY+NAK+ KE+ K WHDK I+ +EF+ G F+VN QR+KHY+GE
Subjt: ACHLPLELEHKTFWALKKLNFDLSRAGAIRMLQLNELEEFRQFSYKNAKIYKEKTKLWHDKKIKSKEFDEKDGRVFKVNGQRVKHYWGE
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P03359 Gag-Pol polyprotein | 8.7e-10 | 33.85 | Show/hide |
Query: DLFNPWIPPPPVEREEENDDEEQVAR--FARFGTPRALVSDEGTHFVNNILTKLLAKYGIKHRIATPYHPQANGQAEISNREIKSILKKV-VHPSRKDWS
D F+ W+ P + E +++ RFG P+ L SD G FV + L + GI ++ Y PQ++GQ E NR IK L K+ + KDW
Subjt: DLFNPWIPPPPVEREEENDDEEQVAR--FARFGTPRALVSDEGTHFVNNILTKLLAKYGIKHRIATPYHPQANGQAEISNREIKSILKKV-VHPSRKDWS
Query: FRLDEALWAFRTAYKTP--LGMSPYRLVYG
L AL R TP G++PY ++YG
Subjt: FRLDEALWAFRTAYKTP--LGMSPYRLVYG
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| P10272 Gag-Pol polyprotein | 1.0e-10 | 32.81 | Show/hide |
Query: DLFNPWIPPPPVEREEENDDEEQVAR--FARFGTPRALVSDEGTHFVNNILTKLLAKYGIKHRIATPYHPQANGQAEISNREIKSILKKV-VHPSRKDWS
D F+ W+ P +E + +++ F RFG P+ + SD G FV+ + L GI ++ Y PQ++GQ E NR IK L K+ + KDW
Subjt: DLFNPWIPPPPVEREEENDDEEQVAR--FARFGTPRALVSDEGTHFVNNILTKLLAKYGIKHRIATPYHPQANGQAEISNREIKSILKKV-VHPSRKDWS
Query: FRLDEALWAFRTAYKTPLGMSPYRLVYG
L AL R G++PY ++YG
Subjt: FRLDEALWAFRTAYKTPLGMSPYRLVYG
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| P21414 Gag-Pol polyprotein | 1.9e-09 | 33.85 | Show/hide |
Query: DLFNPWIPPPPVEREEENDDEEQVAR--FARFGTPRALVSDEGTHFVNNILTKLLAKYGIKHRIATPYHPQANGQAEISNREIKSILKKV-VHPSRKDWS
D F+ W+ P + E +++ RFG P+ L SD G FV + L + GI ++ Y PQ++GQ E NR IK L K+ + KDW
Subjt: DLFNPWIPPPPVEREEENDDEEQVAR--FARFGTPRALVSDEGTHFVNNILTKLLAKYGIKHRIATPYHPQANGQAEISNREIKSILKKV-VHPSRKDWS
Query: FRLDEALWAFRTAYKTP--LGMSPYRLVYG
L AL R TP G++PY ++YG
Subjt: FRLDEALWAFRTAYKTP--LGMSPYRLVYG
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| P31792 Pol polyprotein (Fragment) | 4.6e-11 | 32.81 | Show/hide |
Query: DLFNPWIPPPPVEREEENDDEEQVAR--FARFGTPRALVSDEGTHFVNNILTKLLAKYGIKHRIATPYHPQANGQAEISNREIKSILKKV-VHPSRKDWS
D F+ W+ P +E + +++ F RFG P+ + SD G FV+ + L GI ++ Y PQ++GQ E NR IK L K+ + KDW
Subjt: DLFNPWIPPPPVEREEENDDEEQVAR--FARFGTPRALVSDEGTHFVNNILTKLLAKYGIKHRIATPYHPQANGQAEISNREIKSILKKV-VHPSRKDWS
Query: FRLDEALWAFRTAYKTPLGMSPYRLVYG
L AL R G++PY ++YG
Subjt: FRLDEALWAFRTAYKTPLGMSPYRLVYG
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| Q9TTC1 Gag-Pol polyprotein | 5.6e-09 | 33.08 | Show/hide |
Query: DLFNPWIPPPPVEREEENDDEEQVAR--FARFGTPRALVSDEGTHFVNNILTKLLAKYGIKHRIATPYHPQANGQAEISNREIKSILKKV-VHPSRKDWS
D F+ W+ P + E +++ RFG P+ L SD G FV + L + GI ++ Y PQ++GQ E NR IK L K+ + KDW
Subjt: DLFNPWIPPPPVEREEENDDEEQVAR--FARFGTPRALVSDEGTHFVNNILTKLLAKYGIKHRIATPYHPQANGQAEISNREIKSILKKV-VHPSRKDWS
Query: FRLDEALWAFRTAYKTP--LGMSPYRLVYG
L AL R TP G++PY +++G
Subjt: FRLDEALWAFRTAYKTP--LGMSPYRLVYG
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