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Lag0008776 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008776
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein FAR-RED ELONGATED HYPOCOTYL 3-like
Genome locationchr9:29743443..29743751
RNA-Seq ExpressionLag0008776
SyntenyLag0008776
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039579.1 protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa]1.4e-2051.61Show/hide
Query:  LSHGQLWIVRKFTNEHSCSIDVVQNDHRLATACVACEYAKIIIRAANRLHCTHWDIMEYARKNHGINISYDKAWRGREKALNEIRGSPEQSYA
        L    +WIVRKFT+ H CS+DVV+NDH+ AT+ +  E  K+I +  ++  C   D++ Y + +HG+N+SYDKAWRGRE ALN IRG+ E SYA
Subjt:  LSHGQLWIVRKFTNEHSCSIDVVQNDHRLATACVACEYAKIIIRAANRLHCTHWDIMEYARKNHGINISYDKAWRGREKALNEIRGSPEQSYA

KAA0047666.1 MuDR family transposase [Cucumis melo var. makuwa]2.4e-2053.41Show/hide
Query:  LWIVRKFTNEHSCSIDVVQNDHRLATACVACEYAKIIIRAANRLHCTHWDIMEYARKNHGINISYDKAWRGREKALNEIRGSPEQSYA
        +WIVRKFT+ H CS+DVV+NDH+ AT+ +  E  K+I +  ++  C   +++ Y + +HG+NISYDKAWRGRE ALN IR +PE SYA
Subjt:  LWIVRKFTNEHSCSIDVVQNDHRLATACVACEYAKIIIRAANRLHCTHWDIMEYARKNHGINISYDKAWRGREKALNEIRGSPEQSYA

KAA0061274.1 uncharacterized protein E6C27_scaffold455G001170 [Cucumis melo var. makuwa]2.2e-2155.68Show/hide
Query:  LWIVRKFTNEHSCSIDVVQNDHRLATACVACEYAKIIIRAANRLHCTHWDIMEYARKNHGINISYDKAWRGREKALNEIRGSPEQSYA
        +WIVRKFT+ H CS+DVV+NDH+ AT+ +  E  K+I +  ++  C   D++ Y + +HG+NISYDKAWRGRE ALN IRG+PE SYA
Subjt:  LWIVRKFTNEHSCSIDVVQNDHRLATACVACEYAKIIIRAANRLHCTHWDIMEYARKNHGINISYDKAWRGREKALNEIRGSPEQSYA

KAA0067552.1 protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa]4.9e-2153.41Show/hide
Query:  LWIVRKFTNEHSCSIDVVQNDHRLATACVACEYAKIIIRAANRLHCTHWDIMEYARKNHGINISYDKAWRGREKALNEIRGSPEQSYA
        +WI+RKFT+ H CS+DVV+NDH+ AT+ +  E  K+I +  ++  C   D++ Y + +HG+NISYDKAWRGRE ALN I+G+PE SYA
Subjt:  LWIVRKFTNEHSCSIDVVQNDHRLATACVACEYAKIIIRAANRLHCTHWDIMEYARKNHGINISYDKAWRGREKALNEIRGSPEQSYA

TYK29863.1 MuDRA-like transposase [Cucumis melo var. makuwa]1.7e-2155.68Show/hide
Query:  LWIVRKFTNEHSCSIDVVQNDHRLATACVACEYAKIIIRAANRLHCTHWDIMEYARKNHGINISYDKAWRGREKALNEIRGSPEQSYA
        +WIVRKFT+ H CS+DVV+NDH+ AT+ +  E  K+I +  ++  C   D++ Y + +HG+NISYDKAWRGRE ALN IRG+PE SYA
Subjt:  LWIVRKFTNEHSCSIDVVQNDHRLATACVACEYAKIIIRAANRLHCTHWDIMEYARKNHGINISYDKAWRGREKALNEIRGSPEQSYA

TrEMBL top hitse value%identityAlignment
A0A5A7TEC9 Protein FAR1-RELATED SEQUENCE 2-like6.9e-2151.61Show/hide
Query:  LSHGQLWIVRKFTNEHSCSIDVVQNDHRLATACVACEYAKIIIRAANRLHCTHWDIMEYARKNHGINISYDKAWRGREKALNEIRGSPEQSYA
        L    +WIVRKFT+ H CS+DVV+NDH+ AT+ +  E  K+I +  ++  C   D++ Y + +HG+N+SYDKAWRGRE ALN IRG+ E SYA
Subjt:  LSHGQLWIVRKFTNEHSCSIDVVQNDHRLATACVACEYAKIIIRAANRLHCTHWDIMEYARKNHGINISYDKAWRGREKALNEIRGSPEQSYA

A0A5A7U0B5 MuDR family transposase1.2e-2053.41Show/hide
Query:  LWIVRKFTNEHSCSIDVVQNDHRLATACVACEYAKIIIRAANRLHCTHWDIMEYARKNHGINISYDKAWRGREKALNEIRGSPEQSYA
        +WIVRKFT+ H CS+DVV+NDH+ AT+ +  E  K+I +  ++  C   +++ Y + +HG+NISYDKAWRGRE ALN IR +PE SYA
Subjt:  LWIVRKFTNEHSCSIDVVQNDHRLATACVACEYAKIIIRAANRLHCTHWDIMEYARKNHGINISYDKAWRGREKALNEIRGSPEQSYA

A0A5A7V1Z6 CCHC-type domain-containing protein1.1e-2155.68Show/hide
Query:  LWIVRKFTNEHSCSIDVVQNDHRLATACVACEYAKIIIRAANRLHCTHWDIMEYARKNHGINISYDKAWRGREKALNEIRGSPEQSYA
        +WIVRKFT+ H CS+DVV+NDH+ AT+ +  E  K+I +  ++  C   D++ Y + +HG+NISYDKAWRGRE ALN IRG+PE SYA
Subjt:  LWIVRKFTNEHSCSIDVVQNDHRLATACVACEYAKIIIRAANRLHCTHWDIMEYARKNHGINISYDKAWRGREKALNEIRGSPEQSYA

A0A5A7VGR4 Protein FAR1-RELATED SEQUENCE 2-like2.4e-2153.41Show/hide
Query:  LWIVRKFTNEHSCSIDVVQNDHRLATACVACEYAKIIIRAANRLHCTHWDIMEYARKNHGINISYDKAWRGREKALNEIRGSPEQSYA
        +WI+RKFT+ H CS+DVV+NDH+ AT+ +  E  K+I +  ++  C   D++ Y + +HG+NISYDKAWRGRE ALN I+G+PE SYA
Subjt:  LWIVRKFTNEHSCSIDVVQNDHRLATACVACEYAKIIIRAANRLHCTHWDIMEYARKNHGINISYDKAWRGREKALNEIRGSPEQSYA

A0A5D3E198 MuDRA-like transposase8.2e-2255.68Show/hide
Query:  LWIVRKFTNEHSCSIDVVQNDHRLATACVACEYAKIIIRAANRLHCTHWDIMEYARKNHGINISYDKAWRGREKALNEIRGSPEQSYA
        +WIVRKFT+ H CS+DVV+NDH+ AT+ +  E  K+I +  ++  C   D++ Y + +HG+NISYDKAWRGRE ALN IRG+PE SYA
Subjt:  LWIVRKFTNEHSCSIDVVQNDHRLATACVACEYAKIIIRAANRLHCTHWDIMEYARKNHGINISYDKAWRGREKALNEIRGSPEQSYA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCATGGTAAATATGCGCATCTACTTATCACATGGGCAGCTGTGGATTGTACGGAAGTTTACCAATGAGCACAGTTGTTCCATTGATGTAGTTCAAAACGATCACAG
GCTAGCGACTGCATGCGTTGCGTGCGAGTATGCAAAGATTATAATAAGGGCCGCTAACAGGTTGCACTGCACACATTGGGATATAATGGAGTATGCTAGGAAAAATCATG
GAATCAATATTAGTTATGACAAAGCATGGAGGGGAAGAGAGAAGGCTCTAAATGAGATAAGAGGATCCCCTGAACAGTCCTATGCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCCATGGTAAATATGCGCATCTACTTATCACATGGGCAGCTGTGGATTGTACGGAAGTTTACCAATGAGCACAGTTGTTCCATTGATGTAGTTCAAAACGATCACAG
GCTAGCGACTGCATGCGTTGCGTGCGAGTATGCAAAGATTATAATAAGGGCCGCTAACAGGTTGCACTGCACACATTGGGATATAATGGAGTATGCTAGGAAAAATCATG
GAATCAATATTAGTTATGACAAAGCATGGAGGGGAAGAGAGAAGGCTCTAAATGAGATAAGAGGATCCCCTGAACAGTCCTATGCGTAA
Protein sequenceShow/hide protein sequence
MPMVNMRIYLSHGQLWIVRKFTNEHSCSIDVVQNDHRLATACVACEYAKIIIRAANRLHCTHWDIMEYARKNHGINISYDKAWRGREKALNEIRGSPEQSYA