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Lag0008819 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008819
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr9:30671728..30672102
RNA-Seq ExpressionLag0008819
SyntenyLag0008819
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG48983.1 hypothetical protein EZV62_024858 [Acer yangbiense]2.9e-0733.05Show/hide
Query:  MLAASLILPVCWCADLAEGWAIVESVRVAVQQGFTRFQIESDSLRTIRLLNCETEDISEVGSLMAMVHHLLPGDCFGGASFIPRTGNHVAHVLAQMAIGS
        ML+       C+   +AE  A+VE +R+A   GF    +ESD+L  +R +  +    SEVG ++  + H      F   S++PR    VAH LA++A+  
Subjt:  MLAASLILPVCWCADLAEGWAIVESVRVAVQQGFTRFQIESDSLRTIRLLNCETEDISEVGSLMAMVHHLLPGDCFGGASFIPRTGNHVAHVLAQMAIGS

Query:  LSNRLWVGECHVRVLSLV
        L   +W G+C + V +LV
Subjt:  LSNRLWVGECHVRVLSLV

TXG71533.1 hypothetical protein EZV62_000112 [Acer yangbiense]8.4e-0732.08Show/hide
Query:  LAEGWAIVESVRVAVQQGFTRFQIESDSLRTIRLLNCETEDISEVGSLMAMVHHLLPGDCFGGASFIPRTGNHVAHVLAQMAIGSLSNRLWVGECHVRVL
        +AE  AI+E +R A  + F++  +ESD+L  ++ +N ++   SEVG ++  +  +L        +F+PR GN VAH LA++ +      +W+ +C + V 
Subjt:  LAEGWAIVESVRVAVQQGFTRFQIESDSLRTIRLLNCETEDISEVGSLMAMVHHLLPGDCFGGASFIPRTGNHVAHVLAQMAIGSLSNRLWVGECHVRVL

Query:  SLVSKD
        +LV  D
Subjt:  SLVSKD

TXG72479.1 hypothetical protein EZV62_001058 [Acer yangbiense]2.2e-0731.25Show/hide
Query:  VCWCADLAEGWAIVESVRVAVQQGFTRFQIESDSLRTIRLLNCETEDISEVGSLMAMVHHLLPGDCFGGASFIPRTGNHVAHVLAQMAIGSLSNRLWVGE
        VC+   +AE  AI+   R+A + G     +ESD+L  +  +  ++  +SEVG ++  +  +          F+PR  N V H LA++A+G +   +WV +
Subjt:  VCWCADLAEGWAIVESVRVAVQQGFTRFQIESDSLRTIRLLNCETEDISEVGSLMAMVHHLLPGDCFGGASFIPRTGNHVAHVLAQMAIGSLSNRLWVGE

Query:  CHVRVLSLVSKD
        C + V SLV  D
Subjt:  CHVRVLSLVSKD

XP_022135942.1 uncharacterized protein LOC111007775 [Momordica charantia]1.5e-0842.11Show/hide
Query:  LAEGWAIVESVRVAVQQGFTRFQIESDSLRTIRLLNCETEDISEVGSLMAMVHHLLPG-DCFGGASFIPRTGNHVAHVLAQMAIGSLSNRLWVGE
        LAE  A  E V +A++ G   FQIE+DS +   LL  + ED SE+G L + + H++      GG SF+ R GN  AH LA+M + S S  +WV E
Subjt:  LAEGWAIVESVRVAVQQGFTRFQIESDSLRTIRLLNCETEDISEVGSLMAMVHHLLPG-DCFGGASFIPRTGNHVAHVLAQMAIGSLSNRLWVGE

XP_022150944.1 uncharacterized protein LOC111018973 [Momordica charantia]1.3e-1040.74Show/hide
Query:  DLAEGWAIVESVRVAVQQGFTRFQIESDSLRTIRLLNCETEDISEVGSLMAMVHHLLPGDCFG-GASFIPRTGNHVAHVLAQMAIGSLSNRLWVGECHVR
        D  EG+A+ E + +AV+ GF RFQIE+DSLR   LL  +  D SEVG L +++   L         SF  R GN  AH+LAQ+A+ S   ++WV E    
Subjt:  DLAEGWAIVESVRVAVQQGFTRFQIESDSLRTIRLLNCETEDISEVGSLMAMVHHLLPGDCFG-GASFIPRTGNHVAHVLAQMAIGSLSNRLWVGECHVR

Query:  VLSLVSKD
        + S+++ D
Subjt:  VLSLVSKD

TrEMBL top hitse value%identityAlignment
A0A5C7GW84 RNase H domain-containing protein1.4e-0733.05Show/hide
Query:  MLAASLILPVCWCADLAEGWAIVESVRVAVQQGFTRFQIESDSLRTIRLLNCETEDISEVGSLMAMVHHLLPGDCFGGASFIPRTGNHVAHVLAQMAIGS
        ML+       C+   +AE  A+VE +R+A   GF    +ESD+L  +R +  +    SEVG ++  + H      F   S++PR    VAH LA++A+  
Subjt:  MLAASLILPVCWCADLAEGWAIVESVRVAVQQGFTRFQIESDSLRTIRLLNCETEDISEVGSLMAMVHHLLPGDCFGGASFIPRTGNHVAHVLAQMAIGS

Query:  LSNRLWVGECHVRVLSLV
        L   +W G+C + V +LV
Subjt:  LSNRLWVGECHVRVLSLV

A0A5C7ITL2 RNase H domain-containing protein1.1e-0731.25Show/hide
Query:  VCWCADLAEGWAIVESVRVAVQQGFTRFQIESDSLRTIRLLNCETEDISEVGSLMAMVHHLLPGDCFGGASFIPRTGNHVAHVLAQMAIGSLSNRLWVGE
        VC+   +AE  AI+   R+A + G     +ESD+L  +  +  ++  +SEVG ++  +  +          F+PR  N V H LA++A+G +   +WV +
Subjt:  VCWCADLAEGWAIVESVRVAVQQGFTRFQIESDSLRTIRLLNCETEDISEVGSLMAMVHHLLPGDCFGGASFIPRTGNHVAHVLAQMAIGSLSNRLWVGE

Query:  CHVRVLSLVSKD
        C + V SLV  D
Subjt:  CHVRVLSLVSKD

A0A6J1C467 uncharacterized protein LOC1110077757.4e-0942.11Show/hide
Query:  LAEGWAIVESVRVAVQQGFTRFQIESDSLRTIRLLNCETEDISEVGSLMAMVHHLLPG-DCFGGASFIPRTGNHVAHVLAQMAIGSLSNRLWVGE
        LAE  A  E V +A++ G   FQIE+DS +   LL  + ED SE+G L + + H++      GG SF+ R GN  AH LA+M + S S  +WV E
Subjt:  LAEGWAIVESVRVAVQQGFTRFQIESDSLRTIRLLNCETEDISEVGSLMAMVHHLLPG-DCFGGASFIPRTGNHVAHVLAQMAIGSLSNRLWVGE

A0A6J1DBJ7 uncharacterized protein LOC1110189736.1e-1140.74Show/hide
Query:  DLAEGWAIVESVRVAVQQGFTRFQIESDSLRTIRLLNCETEDISEVGSLMAMVHHLLPGDCFG-GASFIPRTGNHVAHVLAQMAIGSLSNRLWVGECHVR
        D  EG+A+ E + +AV+ GF RFQIE+DSLR   LL  +  D SEVG L +++   L         SF  R GN  AH+LAQ+A+ S   ++WV E    
Subjt:  DLAEGWAIVESVRVAVQQGFTRFQIESDSLRTIRLLNCETEDISEVGSLMAMVHHLLPGDCFG-GASFIPRTGNHVAHVLAQMAIGSLSNRLWVGECHVR

Query:  VLSLVSKD
        + S+++ D
Subjt:  VLSLVSKD

A0A803PGA4 Uncharacterized protein2.4e-0737.5Show/hide
Query:  AIVESVRVAVQQGFTRFQIESDSLRTIRLLNCETEDISEVGSLMAMVHHLLPGDCFGGASFIPRTGNHVAHVLAQMAIGSLSNRLWVG
        AI+  ++V +Q+   RF IESD L+ I+L+  + E   +V  L+  +  LL  D   G SFI R  N VAHVLA   + + ++ +W+G
Subjt:  AIVESVRVAVQQGFTRFQIESDSLRTIRLLNCETEDISEVGSLMAMVHHLLPGDCFGGASFIPRTGNHVAHVLAQMAIGSLSNRLWVG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGCAGCTTCACTAATTCTTCCGGTTTGTTGGTGTGCAGATTTGGCGGAGGGATGGGCGATAGTGGAGAGTGTTCGTGTAGCTGTTCAGCAAGGCTTCACACGGTT
CCAGATTGAGTCGGACTCCTTGCGTACGATCCGACTTTTGAATTGTGAGACAGAGGATATTTCTGAAGTGGGGTCTTTAATGGCTATGGTTCACCATTTGCTTCCTGGTG
ATTGTTTTGGGGGTGCTTCTTTCATCCCACGAACTGGTAATCATGTGGCTCATGTTTTGGCTCAAATGGCTATTGGGTCTTTGTCGAATCGTTTATGGGTTGGGGAATGT
CATGTCCGAGTTCTTTCTTTAGTTTCCAAGGATTATGTGGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGGCAGCTTCACTAATTCTTCCGGTTTGTTGGTGTGCAGATTTGGCGGAGGGATGGGCGATAGTGGAGAGTGTTCGTGTAGCTGTTCAGCAAGGCTTCACACGGTT
CCAGATTGAGTCGGACTCCTTGCGTACGATCCGACTTTTGAATTGTGAGACAGAGGATATTTCTGAAGTGGGGTCTTTAATGGCTATGGTTCACCATTTGCTTCCTGGTG
ATTGTTTTGGGGGTGCTTCTTTCATCCCACGAACTGGTAATCATGTGGCTCATGTTTTGGCTCAAATGGCTATTGGGTCTTTGTCGAATCGTTTATGGGTTGGGGAATGT
CATGTCCGAGTTCTTTCTTTAGTTTCCAAGGATTATGTGGTGTAG
Protein sequenceShow/hide protein sequence
MLAASLILPVCWCADLAEGWAIVESVRVAVQQGFTRFQIESDSLRTIRLLNCETEDISEVGSLMAMVHHLLPGDCFGGASFIPRTGNHVAHVLAQMAIGSLSNRLWVGEC
HVRVLSLVSKDYVV