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Lag0008827 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008827
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionMitochondrial processing peptidase beta subunit
Genome locationchr9:30707873..30709376
RNA-Seq ExpressionLag0008827
SyntenyLag0008827
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0004222 - metalloendopeptidase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR007863 - Peptidase M16, C-terminal
IPR011249 - Metalloenzyme, LuxS/M16 peptidase-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA2623405.1 unnamed protein product [Spirodela intermedia]8.6e-1454.88Show/hide
Query:  ITGPIGKEYVDLWPKITSAANAIIQLQRSQQFLLILRLGIIDDDVPLAQFAFAFNGASWTDPDSITLMVMQAMLGSWNKSVG
        I G + K +  L    T+A+  +    +   F     + IIDDDVPLAQFA AFNGASWTDPDSI LMVMQ+MLGSWNK+ G
Subjt:  ITGPIGKEYVDLWPKITSAANAIIQLQRSQQFLLILRLGIIDDDVPLAQFAFAFNGASWTDPDSITLMVMQAMLGSWNKSVG

CAA7399372.1 unnamed protein product [Spirodela intermedia]8.6e-1454.88Show/hide
Query:  ITGPIGKEYVDLWPKITSAANAIIQLQRSQQFLLILRLGIIDDDVPLAQFAFAFNGASWTDPDSITLMVMQAMLGSWNKSVG
        I G + K +  L    T+A+  +    +   F     + IIDDDVPLAQFA AFNGASWTDPDSI LMVMQ+MLGSWNK+ G
Subjt:  ITGPIGKEYVDLWPKITSAANAIIQLQRSQQFLLILRLGIIDDDVPLAQFAFAFNGASWTDPDSITLMVMQAMLGSWNKSVG

XP_022144443.1 probable mitochondrial-processing peptidase subunit beta, mitochondrial isoform X1 [Momordica charantia]8.6e-1462.5Show/hide
Query:  LWPKITSAANAIIQLQRSQQFLLI-LRLGIIDDDVPLAQFAFAFNGASWTDPDSITLMVMQAMLGSWNKSVG
        L+ K++S      QL   +  +     + IIDDDVPLAQFA AFNGASWTDPDSI LMVMQAMLGSWNKS G
Subjt:  LWPKITSAANAIIQLQRSQQFLLI-LRLGIIDDDVPLAQFAFAFNGASWTDPDSITLMVMQAMLGSWNKSVG

XP_022144444.1 probable mitochondrial-processing peptidase subunit beta, mitochondrial isoform X2 [Momordica charantia]8.6e-1462.5Show/hide
Query:  LWPKITSAANAIIQLQRSQQFLLI-LRLGIIDDDVPLAQFAFAFNGASWTDPDSITLMVMQAMLGSWNKSVG
        L+ K++S      QL   +  +     + IIDDDVPLAQFA AFNGASWTDPDSI LMVMQAMLGSWNKS G
Subjt:  LWPKITSAANAIIQLQRSQQFLLI-LRLGIIDDDVPLAQFAFAFNGASWTDPDSITLMVMQAMLGSWNKSVG

XP_022998263.1 probable mitochondrial-processing peptidase subunit beta, mitochondrial [Cucurbita maxima]1.1e-1360.27Show/hide
Query:  DLWPKITSAANAIIQLQRSQQFLLI-LRLGIIDDDVPLAQFAFAFNGASWTDPDSITLMVMQAMLGSWNKSVG
        +L+ K+++      QL   +  +     + IIDDDVPLAQFA AFNGASWTDPDSI LMVMQAMLGSWNKS G
Subjt:  DLWPKITSAANAIIQLQRSQQFLLI-LRLGIIDDDVPLAQFAFAFNGASWTDPDSITLMVMQAMLGSWNKSVG

TrEMBL top hitse value%identityAlignment
A0A6J1CSB3 probable mitochondrial-processing peptidase subunit beta, mitochondrial isoform X24.2e-1462.5Show/hide
Query:  LWPKITSAANAIIQLQRSQQFLLI-LRLGIIDDDVPLAQFAFAFNGASWTDPDSITLMVMQAMLGSWNKSVG
        L+ K++S      QL   +  +     + IIDDDVPLAQFA AFNGASWTDPDSI LMVMQAMLGSWNKS G
Subjt:  LWPKITSAANAIIQLQRSQQFLLI-LRLGIIDDDVPLAQFAFAFNGASWTDPDSITLMVMQAMLGSWNKSVG

A0A6J1CT95 probable mitochondrial-processing peptidase subunit beta, mitochondrial isoform X14.2e-1462.5Show/hide
Query:  LWPKITSAANAIIQLQRSQQFLLI-LRLGIIDDDVPLAQFAFAFNGASWTDPDSITLMVMQAMLGSWNKSVG
        L+ K++S      QL   +  +     + IIDDDVPLAQFA AFNGASWTDPDSI LMVMQAMLGSWNKS G
Subjt:  LWPKITSAANAIIQLQRSQQFLLI-LRLGIIDDDVPLAQFAFAFNGASWTDPDSITLMVMQAMLGSWNKSVG

A0A6J1KG96 probable mitochondrial-processing peptidase subunit beta, mitochondrial5.4e-1460.27Show/hide
Query:  DLWPKITSAANAIIQLQRSQQFLLI-LRLGIIDDDVPLAQFAFAFNGASWTDPDSITLMVMQAMLGSWNKSVG
        +L+ K+++      QL   +  +     + IIDDDVPLAQFA AFNGASWTDPDSI LMVMQAMLGSWNKS G
Subjt:  DLWPKITSAANAIIQLQRSQQFLLI-LRLGIIDDDVPLAQFAFAFNGASWTDPDSITLMVMQAMLGSWNKSVG

A0A7I8IYT2 Hypothetical protein4.2e-1454.88Show/hide
Query:  ITGPIGKEYVDLWPKITSAANAIIQLQRSQQFLLILRLGIIDDDVPLAQFAFAFNGASWTDPDSITLMVMQAMLGSWNKSVG
        I G + K +  L    T+A+  +    +   F     + IIDDDVPLAQFA AFNGASWTDPDSI LMVMQ+MLGSWNK+ G
Subjt:  ITGPIGKEYVDLWPKITSAANAIIQLQRSQQFLLILRLGIIDDDVPLAQFAFAFNGASWTDPDSITLMVMQAMLGSWNKSVG

A0A7I8KPH0 Hypothetical protein4.2e-1454.88Show/hide
Query:  ITGPIGKEYVDLWPKITSAANAIIQLQRSQQFLLILRLGIIDDDVPLAQFAFAFNGASWTDPDSITLMVMQAMLGSWNKSVG
        I G + K +  L    T+A+  +    +   F     + IIDDDVPLAQFA AFNGASWTDPDSI LMVMQ+MLGSWNK+ G
Subjt:  ITGPIGKEYVDLWPKITSAANAIIQLQRSQQFLLILRLGIIDDDVPLAQFAFAFNGASWTDPDSITLMVMQAMLGSWNKSVG

SwissProt top hitse value%identityAlignment
P49690 60S ribosomal protein L232.4e-0679.31Show/hide
Query:  MKGFAITGPIGKEYVDLWPKITSAANAII
        MKG AITGPIGKE  DLWP+I SAANAI+
Subjt:  MKGFAITGPIGKEYVDLWPKITSAANAII

Q07760 60S ribosomal protein L232.4e-0679.31Show/hide
Query:  MKGFAITGPIGKEYVDLWPKITSAANAII
        MKG AITGPIGKE  DLWP+I SAANAI+
Subjt:  MKGFAITGPIGKEYVDLWPKITSAANAII

Q42290 Probable mitochondrial-processing peptidase subunit beta, mitochondrial1.8e-1481.4Show/hide
Query:  IIDDDVPLAQFAFAFNGASWTDPDSITLMVMQAMLGSWNKSVG
        +IDDD+PLAQFA AF GASWTDPDS+ LMVMQ MLGSWNK+VG
Subjt:  IIDDDVPLAQFAFAFNGASWTDPDSITLMVMQAMLGSWNKSVG

Q9P7X1 Probable mitochondrial-processing peptidase subunit beta4.0e-0650Show/hide
Query:  DDDVPLAQFAFAFNGASWTDPDSITLMVMQAMLGSWNKSVGA
        DDD P A  A A  G SW  PD  T +VMQA++G+W++++GA
Subjt:  DDDVPLAQFAFAFNGASWTDPDSITLMVMQAMLGSWNKSVGA

Q9Y8B5 Mitochondrial-processing peptidase subunit beta8.9e-0645.45Show/hide
Query:  IIDDDVPLAQFAFAFNGASWTDPDSITLMVMQAMLGSWNKSVGA
        I DD++P A  A A  G  W+ PD   +MVMQ++ G+W++S+GA
Subjt:  IIDDDVPLAQFAFAFNGASWTDPDSITLMVMQAMLGSWNKSVGA

Arabidopsis top hitse value%identityAlignment
AT1G04480.1 Ribosomal protein L14p/L23e family protein1.7e-0779.31Show/hide
Query:  MKGFAITGPIGKEYVDLWPKITSAANAII
        MKG AITGPIGKE  DLWP+I SAANAI+
Subjt:  MKGFAITGPIGKEYVDLWPKITSAANAII

AT2G33370.1 Ribosomal protein L14p/L23e family protein1.7e-0779.31Show/hide
Query:  MKGFAITGPIGKEYVDLWPKITSAANAII
        MKG AITGPIGKE  DLWP+I SAANAI+
Subjt:  MKGFAITGPIGKEYVDLWPKITSAANAII

AT3G02090.1 Insulinase (Peptidase family M16) protein1.3e-1581.4Show/hide
Query:  IIDDDVPLAQFAFAFNGASWTDPDSITLMVMQAMLGSWNKSVG
        +IDDD+PLAQFA AF GASWTDPDS+ LMVMQ MLGSWNK+VG
Subjt:  IIDDDVPLAQFAFAFNGASWTDPDSITLMVMQAMLGSWNKSVG

AT3G02090.2 Insulinase (Peptidase family M16) protein1.3e-1581.4Show/hide
Query:  IIDDDVPLAQFAFAFNGASWTDPDSITLMVMQAMLGSWNKSVG
        +IDDD+PLAQFA AF GASWTDPDS+ LMVMQ MLGSWNK+VG
Subjt:  IIDDDVPLAQFAFAFNGASWTDPDSITLMVMQAMLGSWNKSVG

AT3G04400.1 Ribosomal protein L14p/L23e family protein1.7e-0779.31Show/hide
Query:  MKGFAITGPIGKEYVDLWPKITSAANAII
        MKG AITGPIGKE  DLWP+I SAANAI+
Subjt:  MKGFAITGPIGKEYVDLWPKITSAANAII


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGGTTTTGCAATTACTGGTCCTATTGGAAAGGAGTATGTGGATTTATGGCCTAAGATCACAAGTGCAGCCAATGCTATCATTCAGTTGCAAAGGAGCCAACAATT
TTTACTTATTTTGAGGTTAGGAATAATTGATGACGATGTTCCTTTGGCACAATTTGCTTTTGCTTTTAACGGAGCATCCTGGACAGATCCAGACTCCATCACTCTAATGG
TTATGCAGGCTATGTTGGGTTCTTGGAATAAAAGTGTTGGAGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGGTTTTGCAATTACTGGTCCTATTGGAAAGGAGTATGTGGATTTATGGCCTAAGATCACAAGTGCAGCCAATGCTATCATTCAGTTGCAAAGGAGCCAACAATT
TTTACTTATTTTGAGGTTAGGAATAATTGATGACGATGTTCCTTTGGCACAATTTGCTTTTGCTTTTAACGGAGCATCCTGGACAGATCCAGACTCCATCACTCTAATGG
TTATGCAGGCTATGTTGGGTTCTTGGAATAAAAGTGTTGGAGCTTGA
Protein sequenceShow/hide protein sequence
MKGFAITGPIGKEYVDLWPKITSAANAIIQLQRSQQFLLILRLGIIDDDVPLAQFAFAFNGASWTDPDSITLMVMQAMLGSWNKSVGA