; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0008845 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008845
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr9:30972761..30974358
RNA-Seq ExpressionLag0008845
SyntenyLag0008845
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ONI01138.1 hypothetical protein PRUPE_6G123900 [Prunus persica]2.2e-2627.83Show/hide
Query:  FPEAGLGSRPSFVWRSLLWGQELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLP-ATRPTFTFE-----------------------------
        F EA +G+ PSF+WRSL WG+ELL +G RWR+G+G S  +Y   WLP   C ++ S P LP +TR    F                              
Subjt:  FPEAGLGSRPSFVWRSLLWGQELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLP-ATRPTFTFE-----------------------------

Query:  -PGQDACV----------------VVGL-----------------------WRLNVPNKHKFFLWRLFHDRLPTKENLLKCGIIVSSLCTLCNDQVEDRL
          G D  +                + GL                       W L +PNK KFFLWR   D LP  + L    I  + +C  C+ + E  L
Subjt:  -PGQDACV----------------VVGL-----------------------WRLNVPNKHKFFLWRLFHDRLPTKENLLKCGIIVSSLCTLCNDQVEDRL

Query:  HLFWNCPVVECMWLGSKFASLRGSFSLFRFEEIVGAMKDNLPGPDFELVVIFWWSVWNLRNSLVGVVGQRVGIYGLSQTT--------------TSMPSM
        H  W C   + +W  S + ++   + +  F E+  A++ +  G +  L     W +WN RNS +        I  LS+ T              T     
Subjt:  HLFWNCPVVECMWLGSKFASLRGSFSLFRFEEIVGAMKDNLPGPDFELVVIFWWSVWNLRNSLVGVVGQRVGIYGLSQTT--------------TSMPSM

Query:  WWEALPNRGLLTGPIEDHEDRYTGEAGGGCVLRGAEGEVFMAACL
             P +G    P     D   G    G V+R A GE FMAAC+
Subjt:  WWEALPNRGLLTGPIEDHEDRYTGEAGGGCVLRGAEGEVFMAACL

VVA32947.1 PREDICTED: retrotransposon [Prunus dulcis]2.7e-2426.55Show/hide
Query:  FPEAGLGSRPSFVWRSLLWGQELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLPATR---PTFTFE---------------------------
        F EA +G+ PSF+WRSL WG+ELL +G RWR+GNG S  +Y   WLP     ++ S P LP +      FT                             
Subjt:  FPEAGLGSRPSFVWRSLLWGQELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLPATR---PTFTFE---------------------------

Query:  -PGQD--------------------ACVVVG-------------------LWRLNVPNKHKFFLWRLFHDRLPTKENLLKCGIIVSSLCTLCNDQVEDRL
          G D                    AC+                      +W L +PNK KFFLWR   D LP  + L    I  + +C  C+ + E  L
Subjt:  -PGQD--------------------ACVVVG-------------------LWRLNVPNKHKFFLWRLFHDRLPTKENLLKCGIIVSSLCTLCNDQVEDRL

Query:  HLFWNCPVVECMWLGSKFASLRGSFSLFRFEEIVGAMKDNLPGPDFELVVIFWWSVWNLRNSLV---------------GVVGQRVG--------IYGLS
        H  W C   + +W  S + ++   + +  F E+  A++ +  G +  L     W +WN RNS +                 + Q           I+G  
Subjt:  HLFWNCPVVECMWLGSKFASLRGSFSLFRFEEIVGAMKDNLPGPDFELVVIFWWSVWNLRNSLV---------------GVVGQRVG--------IYGLS

Query:  QTTTSMPSMWWEALPNRGLLTGPIEDHEDRYTGEAGGGCVLRGAEGEVFMAACL
        Q++   P   W   P  G+    ++          G G V+R A GE FMAAC+
Subjt:  QTTTSMPSMWWEALPNRGLLTGPIEDHEDRYTGEAGGGCVLRGAEGEVFMAACL

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]1.8e-3627.75Show/hide
Query:  FPEAGLGSRPSFVWRSLLWGQELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLP-------------------ATRPTFTFEPGQ--------
        F EA +   PS++WRS+LWG++LL +G RWRIGNG S  IYG NW+P +  L++ S P LP                     R  FT +  +        
Subjt:  FPEAGLGSRPSFVWRSLLWGQELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLP-------------------ATRPTFTFEPGQ--------

Query:  ------------------------------DACVVV--------------GLWRLNVPNKHKFFLWRLFHDRLPTKENLLKCGIIVSSLCTLCNDQVEDR
                                      + CV                G W++++PNK K FLWRL  DRLPT  NL K G+ +++ C  C    ED 
Subjt:  ------------------------------DACVVV--------------GLWRLNVPNKHKFFLWRLFHDRLPTKENLLKCGIIVSSLCTLCNDQVEDR

Query:  LHLFWNCPVVECMWLGSKFASLRGSFSLFRFEEIVGAMKDNLPGPDFELVVIFWWSVWNLRNS--------LVGVVGQRVGIYG--------------LS
        +HLFW C   E +W+ SKF    G  S F    I+    ++L   DFE + +  W +WN RN+         V  +G  +  +               ++
Subjt:  LHLFWNCPVVECMWLGSKFASLRGSFSLFRFEEIVGAMKDNLPGPDFELVVIFWWSVWNLRNS--------LVGVVGQRVGIYG--------------LS

Query:  QTTTSMPSMWWEALPNRGLLTGPIEDHEDRYTGEAGGGCVLRGAEGEVFMAACLSLQRCWSVDLAEGWAMYKGSSLL-------ASWDVSEVGRLMEDVR
           T+   + W+  P+ G+     +         AG G ++    G+V  AA   L+   SVD+AE  A  +G  L        A  D+SE G ++   +
Subjt:  QTTTSMPSMWWEALPNRGLLTGPIEDHEDRYTGEAGGGCVLRGAEGEVFMAACLSLQRCWSVDLAEGWAMYKGSSLL-------ASWDVSEVGRLMEDVR

Query:  MILHPWDRSKVVFVPRQG
                +   FV R+G
Subjt:  MILHPWDRSKVVFVPRQG

XP_023880772.1 uncharacterized protein LOC111993138 [Quercus suber]5.0e-2625.91Show/hide
Query:  MANFGGMGRRMQANPLDELGVVVPSQVHG---FPEAGLGSRPSFVWRSLLWGQELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLPATRPTFT
        +A     G R+Q NP   +  +  ++      F EA LG  PS++WRSL+  ++++V G RW +GNG +  I+   W+P                     
Subjt:  MANFGGMGRRMQANPLDELGVVVPSQVHG---FPEAGLGSRPSFVWRSLLWGQELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLPATRPTFT

Query:  FEPGQDACVVVGLWRLNVPNKHKFFLWRLFHDRLPTKENLLKCGIIVSSLCTLCN--DQVEDRLHLFWNCPVVECMWLGSKFASLRGSFSLFRFEEIVGA
             D+ +V  +W LN PNK K FLWR   + LPTK  L   G+ +   C  C   + VE   H+ W C     +W  S+       +    F E+V  
Subjt:  FEPGQDACVVVGLWRLNVPNKHKFFLWRLFHDRLPTKENLLKCGIIVSSLCTLCN--DQVEDRLHLFWNCPVVECMWLGSKFASLRGSFSLFRFEEIVGA

Query:  MKDNLPGPDFELVVIFWWSVWNLRNSLVGVVGQRVGIYGLSQ----------------TTTSMPSMWWEALPNRGLLTGPIEDHEDRYTGEAGGGCVLRG
        ++D  P  D+EL     W +WN RN+ V   GQR   + L++                   S P       P +G     ++    +     G G V+R 
Subjt:  MKDNLPGPDFELVVIFWWSVWNLRNSLVGVVGQRVGIYGLSQ----------------TTTSMPSMWWEALPNRGLLTGPIEDHEDRYTGEAGGGCVLRG

Query:  AEGEVFMAACLSLQRCWSVDLAEGWAMYKGSSLLASWDVSEVGRLMEDVRMIL---------HPWDRSKVVFVPRQGIGWHMYWQA
        AEG++  A    L+        E  A+ +G  L  +WD+     + E   + +          PW   KV+   +  +G    W A
Subjt:  AEGEVFMAACLSLQRCWSVDLAEGWAMYKGSSLLASWDVSEVGRLMEDVRMIL---------HPWDRSKVVFVPRQGIGWHMYWQA

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]1.6e-2427.42Show/hide
Query:  GFPEAGLGSRPSFVWRSLLWGQELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSL---------------------------------------
        GF  AGLGS+PSFVWRS++WG+++L +G RWRIGNG++  +YG+NW+P+    +  S PS+                                       
Subjt:  GFPEAGLGSRPSFVWRSLLWGQELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSL---------------------------------------

Query:  -------------------------PATRPTFTFEP---GQDACVVVGLWRLNVPNKHKFFLWRLFHDRLPTKENLLKCGIIVSSLCTLCNDQVEDRLHL
                                  A R  F  +P     D  +   +W+L +P K K FLWR  HD LPT ENL K  ++   +C  C+  VE   H 
Subjt:  -------------------------PATRPTFTFEP---GQDACVVVGLWRLNVPNKHKFFLWRLFHDRLPTKENLLKCGIIVSSLCTLCNDQVEDRLHL

Query:  FWNCPVVECMWLGSKFA-SLRGSF--SLFRFEEIVGAMKDNLPGPDFELVVIFWWSVWNLRN---------SLVGVVGQRVGIYGLSQTTTSMPSM----
           C     +W  S  A  LRG +   +    +        + G +   V    W++W  RN         + + VV     I   S      P M    
Subjt:  FWNCPVVECMWLGSKFA-SLRGSF--SLFRFEEIVGAMKDNLPGPDFELVVIFWWSVWNLRN---------SLVGVVGQRVGIYGLSQTTTSMPSM----

Query:  --------WWEALPNRGLLTGPIEDHEDRYTGEAGGGCVLRGAEGEVFMAACLSLQRCWSVDLAEGWAMYKG
                 W   PN G     ++   D     AG G V+R ++G    AA  SL+   SV +AE  AM  G
Subjt:  --------WWEALPNRGLLTGPIEDHEDRYTGEAGGGCVLRGAEGEVFMAACLSLQRCWSVDLAEGWAMYKG

TrEMBL top hitse value%identityAlignment
A0A251NPF0 Reverse transcriptase domain-containing protein1.1e-2627.83Show/hide
Query:  FPEAGLGSRPSFVWRSLLWGQELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLP-ATRPTFTFE-----------------------------
        F EA +G+ PSF+WRSL WG+ELL +G RWR+G+G S  +Y   WLP   C ++ S P LP +TR    F                              
Subjt:  FPEAGLGSRPSFVWRSLLWGQELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLP-ATRPTFTFE-----------------------------

Query:  -PGQDACV----------------VVGL-----------------------WRLNVPNKHKFFLWRLFHDRLPTKENLLKCGIIVSSLCTLCNDQVEDRL
          G D  +                + GL                       W L +PNK KFFLWR   D LP  + L    I  + +C  C+ + E  L
Subjt:  -PGQDACV----------------VVGL-----------------------WRLNVPNKHKFFLWRLFHDRLPTKENLLKCGIIVSSLCTLCNDQVEDRL

Query:  HLFWNCPVVECMWLGSKFASLRGSFSLFRFEEIVGAMKDNLPGPDFELVVIFWWSVWNLRNSLVGVVGQRVGIYGLSQTT--------------TSMPSM
        H  W C   + +W  S + ++   + +  F E+  A++ +  G +  L     W +WN RNS +        I  LS+ T              T     
Subjt:  HLFWNCPVVECMWLGSKFASLRGSFSLFRFEEIVGAMKDNLPGPDFELVVIFWWSVWNLRNSLVGVVGQRVGIYGLSQTT--------------TSMPSM

Query:  WWEALPNRGLLTGPIEDHEDRYTGEAGGGCVLRGAEGEVFMAACL
             P +G    P     D   G    G V+R A GE FMAAC+
Subjt:  WWEALPNRGLLTGPIEDHEDRYTGEAGGGCVLRGAEGEVFMAACL

A0A2N9HE04 Reverse transcriptase domain-containing protein8.5e-2430.43Show/hide
Query:  EAGLGSRPSFVWRSLLWGQELLVRGCRWRIGNGRSTPIYGSNWLP---------------KEVCLQVQSFPSLPATRPTFTFE-----------------
        EA LG+ PSF+WRSLL G++ LV+G +W++G+GRS  ++   WLP               +++  + ++    P    T T E                 
Subjt:  EAGLGSRPSFVWRSLLWGQELLVRGCRWRIGNGRSTPIYGSNWLP---------------KEVCLQVQSFPSLPATRPTFTFE-----------------

Query:  -------PGQDACVVVGLWRLNVPNKHKFFLWRLFHDRLPTKENLLKCGIIVSSLCTLCNDQVEDRLHLFWNCPVVECMW--LGSKFASLRGSFSLFRFE
                G+       +W+L +P K K FLWR   + LPTK NL K  II + LC  C   VE   H+ W CP    +W  +G K    +   S   F 
Subjt:  -------PGQDACVVVGLWRLNVPNKHKFFLWRLFHDRLPTKENLLKCGIIVSSLCTLCNDQVEDRLHLFWNCPVVECMW--LGSKFASLRGSFSLFRFE

Query:  EIVGAMKDNLPGPDFELVVIFWWSVWNLRN
         +V  +   L   + E   +  WS+WN RN
Subjt:  EIVGAMKDNLPGPDFELVVIFWWSVWNLRN

A0A5E4FZN9 PREDICTED: retrotransposon1.3e-2426.55Show/hide
Query:  FPEAGLGSRPSFVWRSLLWGQELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLPATR---PTFTFE---------------------------
        F EA +G+ PSF+WRSL WG+ELL +G RWR+GNG S  +Y   WLP     ++ S P LP +      FT                             
Subjt:  FPEAGLGSRPSFVWRSLLWGQELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLPATR---PTFTFE---------------------------

Query:  -PGQD--------------------ACVVVG-------------------LWRLNVPNKHKFFLWRLFHDRLPTKENLLKCGIIVSSLCTLCNDQVEDRL
          G D                    AC+                      +W L +PNK KFFLWR   D LP  + L    I  + +C  C+ + E  L
Subjt:  -PGQD--------------------ACVVVG-------------------LWRLNVPNKHKFFLWRLFHDRLPTKENLLKCGIIVSSLCTLCNDQVEDRL

Query:  HLFWNCPVVECMWLGSKFASLRGSFSLFRFEEIVGAMKDNLPGPDFELVVIFWWSVWNLRNSLV---------------GVVGQRVG--------IYGLS
        H  W C   + +W  S + ++   + +  F E+  A++ +  G +  L     W +WN RNS +                 + Q           I+G  
Subjt:  HLFWNCPVVECMWLGSKFASLRGSFSLFRFEEIVGAMKDNLPGPDFELVVIFWWSVWNLRNSLV---------------GVVGQRVG--------IYGLS

Query:  QTTTSMPSMWWEALPNRGLLTGPIEDHEDRYTGEAGGGCVLRGAEGEVFMAACL
        Q++   P   W   P  G+    ++          G G V+R A GE FMAAC+
Subjt:  QTTTSMPSMWWEALPNRGLLTGPIEDHEDRYTGEAGGGCVLRGAEGEVFMAACL

A0A6J1DAR4 uncharacterized protein LOC1110189548.8e-3727.75Show/hide
Query:  FPEAGLGSRPSFVWRSLLWGQELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLP-------------------ATRPTFTFEPGQ--------
        F EA +   PS++WRS+LWG++LL +G RWRIGNG S  IYG NW+P +  L++ S P LP                     R  FT +  +        
Subjt:  FPEAGLGSRPSFVWRSLLWGQELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLP-------------------ATRPTFTFEPGQ--------

Query:  ------------------------------DACVVV--------------GLWRLNVPNKHKFFLWRLFHDRLPTKENLLKCGIIVSSLCTLCNDQVEDR
                                      + CV                G W++++PNK K FLWRL  DRLPT  NL K G+ +++ C  C    ED 
Subjt:  ------------------------------DACVVV--------------GLWRLNVPNKHKFFLWRLFHDRLPTKENLLKCGIIVSSLCTLCNDQVEDR

Query:  LHLFWNCPVVECMWLGSKFASLRGSFSLFRFEEIVGAMKDNLPGPDFELVVIFWWSVWNLRNS--------LVGVVGQRVGIYG--------------LS
        +HLFW C   E +W+ SKF    G  S F    I+    ++L   DFE + +  W +WN RN+         V  +G  +  +               ++
Subjt:  LHLFWNCPVVECMWLGSKFASLRGSFSLFRFEEIVGAMKDNLPGPDFELVVIFWWSVWNLRNS--------LVGVVGQRVGIYG--------------LS

Query:  QTTTSMPSMWWEALPNRGLLTGPIEDHEDRYTGEAGGGCVLRGAEGEVFMAACLSLQRCWSVDLAEGWAMYKGSSLL-------ASWDVSEVGRLMEDVR
           T+   + W+  P+ G+     +         AG G ++    G+V  AA   L+   SVD+AE  A  +G  L        A  D+SE G ++   +
Subjt:  QTTTSMPSMWWEALPNRGLLTGPIEDHEDRYTGEAGGGCVLRGAEGEVFMAACLSLQRCWSVDLAEGWAMYKGSSLL-------ASWDVSEVGRLMEDVR

Query:  MILHPWDRSKVVFVPRQG
                +   FV R+G
Subjt:  MILHPWDRSKVVFVPRQG

M5W5F3 Reverse transcriptase domain-containing protein (Fragment)1.1e-2627.83Show/hide
Query:  FPEAGLGSRPSFVWRSLLWGQELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLP-ATRPTFTFE-----------------------------
        F EA +G+ PSF+WRSL WG+ELL +G RWR+G+G S  +Y   WLP   C ++ S P LP +TR    F                              
Subjt:  FPEAGLGSRPSFVWRSLLWGQELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLP-ATRPTFTFE-----------------------------

Query:  -PGQDACV----------------VVGL-----------------------WRLNVPNKHKFFLWRLFHDRLPTKENLLKCGIIVSSLCTLCNDQVEDRL
          G D  +                + GL                       W L +PNK KFFLWR   D LP  + L    I  + +C  C+ + E  L
Subjt:  -PGQDACV----------------VVGL-----------------------WRLNVPNKHKFFLWRLFHDRLPTKENLLKCGIIVSSLCTLCNDQVEDRL

Query:  HLFWNCPVVECMWLGSKFASLRGSFSLFRFEEIVGAMKDNLPGPDFELVVIFWWSVWNLRNSLVGVVGQRVGIYGLSQTT--------------TSMPSM
        H  W C   + +W  S + ++   + +  F E+  A++ +  G +  L     W +WN RNS +        I  LS+ T              T     
Subjt:  HLFWNCPVVECMWLGSKFASLRGSFSLFRFEEIVGAMKDNLPGPDFELVVIFWWSVWNLRNSLVGVVGQRVGIYGLSQTT--------------TSMPSM

Query:  WWEALPNRGLLTGPIEDHEDRYTGEAGGGCVLRGAEGEVFMAACL
             P +G    P     D   G    G V+R A GE FMAAC+
Subjt:  WWEALPNRGLLTGPIEDHEDRYTGEAGGGCVLRGAEGEVFMAACL

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657502.4e-0727.35Show/hide
Query:  LWRLNVPNKHKFFLWRLFHDRLPTKENLLKCGIIVSSLCTLCNDQVEDRLHLFWNCPVVECMWLG-SKFASLRGSFSLFRFEEIVGAMKD-----NLPGP
        LW++ VP + K FLW + +  + T+E   +  +  S++C +C   VE  LH+  +CP    +W+        +G FS   FE +   + D     ++P  
Subjt:  LWRLNVPNKHKFFLWRLFHDRLPTKENLLKCGIIVSSLCTLCNDQVEDRLHLFWNCPVVECMWLG-SKFASLRGSFSLFRFEEIVGAMKD-----NLPGP

Query:  DFELVVIFWWSVWNLRN
            V+I+W   W   N
Subjt:  DFELVVIFWWSVWNLRN

P93295 Uncharacterized mitochondrial protein AtMg003105.0e-0542Show/hide
Query:  EAGLGSRPSFVWRSLLWGQELLVRGCRWRIGNGRSTPIYGSNWLPKEVCL
        E  +G+RPS+ WRS++ G+ELL RG    IG+G  T ++   W+  E  L
Subjt:  EAGLGSRPSFVWRSLLWGQELLVRGCRWRIGNGRSTPIYGSNWLPKEVCL

Arabidopsis top hitse value%identityAlignment
AT1G33710.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.7e-0825.42Show/hide
Query:  LWRLNVPNKHKFFLWRLFHDRLPTKENLLKCGIIVSSLCTLCNDQVEDRLHLFWNCPVVECMWLGSKFASLRGSFSLFRFEEIVG--AMKDNLPGPDFEL
        +W      KH F +W    DRLPTK  L   G+ + + C LC+  +EDR HLF  C     +W          +FS   + +++     ++    P    
Subjt:  LWRLNVPNKHKFFLWRLFHDRLPTKENLLKCGIIVSSLCTLCNDQVEDRLHLFWNCPVVECMWLGSKFASLRGSFSLFRFEEIVG--AMKDNLPGPDFEL

Query:  VVI--FWWSVWNLRNSLV
        +++    +++W  RN+ +
Subjt:  VVI--FWWSVWNLRNSLV

AT1G43730.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.2e-0836.51Show/hide
Query:  LWRLNVPNKHKFFLWRLFHDRLPTKENLLKCGIIVSSLCTLCNDQVEDRLHLFWNCPVVECMW
        +W  N   KH F  W +  +RL T++ L   G+ + ++C LCN   E R HLF+ CP    +W
Subjt:  LWRLNVPNKHKFFLWRLFHDRLPTKENLLKCGIIVSSLCTLCNDQVEDRLHLFWNCPVVECMW

AT2G02520.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein5.0e-0828.57Show/hide
Query:  LWRLNVPNKHKFFLWRLFHDRLPTKENLLKCGIIVSSLCTLCNDQVEDRLHLFWNCPVVECMWLGSKFASLRGSFSLFRFEEIVGAMKDNLPGPDFELVV
        +W      KH F  W     RL TK+ ++  G I   LC  CN   E R HLF++C     +W+   F S    F    FE+ +  +K+  P  D  +  
Subjt:  LWRLNVPNKHKFFLWRLFHDRLPTKENLLKCGIIVSSLCTLCNDQVEDRLHLFWNCPVVECMWLGSKFASLRGSFSLFRFEEIVGAMKDNLPGPDFELVV

Query:  IF-------WWSVWNLRNS
        I         +++W  RN+
Subjt:  IF-------WWSVWNLRNS

AT3G25270.1 Ribonuclease H-like superfamily protein1.0e-0828.91Show/hide
Query:  PGQDACVVVGLWRLNVPNKHKFFLWRLFHDRLPTKENLLKCGIIVSSLCTLCNDQVEDRLHLFWNCPVVECMW--LGSKFASLR--GSFSLFRFEEIVGA
        P   A +   +W+L    K K FLW+L    L T +NL +  I     C  C  + E   HLF++C   + +W   G     LR  G     + E ++ +
Subjt:  PGQDACVVVGLWRLNVPNKHKFFLWRLFHDRLPTKENLLKCGIIVSSLCTLCNDQVEDRLHLFWNCPVVECMW--LGSKFASLR--GSFSLFRFEEIVGA

Query:  MKDNLPGPDFELVVIFWWSVWNLRNSLV
           N     F L +   W +W  RN LV
Subjt:  MKDNLPGPDFELVVIFWWSVWNLRNSLV

AT4G29090.1 Ribonuclease H-like superfamily protein5.5e-0744.83Show/hide
Query:  AGLGSRPSFVWRSLLWGQELLVRGCRWRIGNGRSTPIYGSNWL---PKEVCLQVQSFP
        A LGSRPSFVW+S+   QE+L +G R  +GNG    I+   WL   P    L++Q  P
Subjt:  AGLGSRPSFVWRSLLWGQELLVRGCRWRIGNGRSTPIYGSNWL---PKEVCLQVQSFP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAATTTTGGTGGAATGGGTCGGAGGATGCAAGCGAATCCATTGGATGAGCTGGGAGTCGTTGTGCCGTCCCAAGTGCATGGGTTTCCTGAGGCTGGTCTTGGATC
GAGACCGTCGTTTGTATGGCGTAGTTTGTTATGGGGGCAGGAGCTTTTGGTTCGAGGTTGTCGTTGGAGGATAGGTAATGGACGATCTACGCCTATTTATGGTTCAAACT
GGCTGCCGAAGGAGGTCTGCCTTCAGGTACAGTCGTTCCCATCACTTCCTGCTACTAGACCGACCTTCACCTTCGAACCTGGACAGGATGCGTGCGTGGTGGTTGGCCTT
TGGAGGCTGAATGTGCCTAATAAGCACAAGTTCTTCTTGTGGCGACTGTTCCATGATCGGTTGCCTACTAAGGAAAACCTTCTCAAGTGTGGCATCATTGTCTCTAGCTT
GTGTACTTTGTGTAATGATCAGGTTGAGGACCGTCTGCATCTGTTCTGGAATTGCCCTGTGGTTGAGTGTATGTGGTTGGGCTCCAAGTTTGCCTCGTTGCGTGGGTCTT
TTTCGCTGTTCAGGTTCGAGGAAATTGTTGGGGCGATGAAGGATAATCTTCCCGGGCCGGATTTTGAGCTGGTGGTCATTTTTTGGTGGTCAGTATGGAACCTCCGAAAC
AGTCTAGTTGGGGTAGTCGGCCAGAGGGTCGGGATCTATGGGCTTTCTCAAACGACTACCTCAATGCCTTCCATGTGGTGGGAGGCGTTGCCTAACAGGGGATTGCTTAC
AGGCCCGATCGAGGATCATGAGGACCGTTATACAGGGGAAGCTGGGGGTGGTTGTGTCCTGCGTGGGGCTGAGGGTGAAGTCTTTATGGCGGCCTGTCTGAGTCTACAGA
GATGTTGGAGCGTGGATTTGGCTGAAGGATGGGCTATGTATAAAGGGTCCAGCTTGCTCGCCAGCTGGGATGTTTCGGAAGTAGGGCGACTGATGGAAGATGTCCGAATG
ATCCTCCATCCCTGGGATAGGAGCAAGGTTGTGTTTGTGCCACGCCAGGGAATAGGGTGGCACATGTACTGGCAAGCTTGGCCTTCTCTTATATTGACCGTGTTTGGCTT
GAGGAAGGGCCTAGCGAAATTTCTGATGCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAATTTTGGTGGAATGGGTCGGAGGATGCAAGCGAATCCATTGGATGAGCTGGGAGTCGTTGTGCCGTCCCAAGTGCATGGGTTTCCTGAGGCTGGTCTTGGATC
GAGACCGTCGTTTGTATGGCGTAGTTTGTTATGGGGGCAGGAGCTTTTGGTTCGAGGTTGTCGTTGGAGGATAGGTAATGGACGATCTACGCCTATTTATGGTTCAAACT
GGCTGCCGAAGGAGGTCTGCCTTCAGGTACAGTCGTTCCCATCACTTCCTGCTACTAGACCGACCTTCACCTTCGAACCTGGACAGGATGCGTGCGTGGTGGTTGGCCTT
TGGAGGCTGAATGTGCCTAATAAGCACAAGTTCTTCTTGTGGCGACTGTTCCATGATCGGTTGCCTACTAAGGAAAACCTTCTCAAGTGTGGCATCATTGTCTCTAGCTT
GTGTACTTTGTGTAATGATCAGGTTGAGGACCGTCTGCATCTGTTCTGGAATTGCCCTGTGGTTGAGTGTATGTGGTTGGGCTCCAAGTTTGCCTCGTTGCGTGGGTCTT
TTTCGCTGTTCAGGTTCGAGGAAATTGTTGGGGCGATGAAGGATAATCTTCCCGGGCCGGATTTTGAGCTGGTGGTCATTTTTTGGTGGTCAGTATGGAACCTCCGAAAC
AGTCTAGTTGGGGTAGTCGGCCAGAGGGTCGGGATCTATGGGCTTTCTCAAACGACTACCTCAATGCCTTCCATGTGGTGGGAGGCGTTGCCTAACAGGGGATTGCTTAC
AGGCCCGATCGAGGATCATGAGGACCGTTATACAGGGGAAGCTGGGGGTGGTTGTGTCCTGCGTGGGGCTGAGGGTGAAGTCTTTATGGCGGCCTGTCTGAGTCTACAGA
GATGTTGGAGCGTGGATTTGGCTGAAGGATGGGCTATGTATAAAGGGTCCAGCTTGCTCGCCAGCTGGGATGTTTCGGAAGTAGGGCGACTGATGGAAGATGTCCGAATG
ATCCTCCATCCCTGGGATAGGAGCAAGGTTGTGTTTGTGCCACGCCAGGGAATAGGGTGGCACATGTACTGGCAAGCTTGGCCTTCTCTTATATTGACCGTGTTTGGCTT
GAGGAAGGGCCTAGCGAAATTTCTGATGCTCTAA
Protein sequenceShow/hide protein sequence
MANFGGMGRRMQANPLDELGVVVPSQVHGFPEAGLGSRPSFVWRSLLWGQELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLPATRPTFTFEPGQDACVVVGL
WRLNVPNKHKFFLWRLFHDRLPTKENLLKCGIIVSSLCTLCNDQVEDRLHLFWNCPVVECMWLGSKFASLRGSFSLFRFEEIVGAMKDNLPGPDFELVVIFWWSVWNLRN
SLVGVVGQRVGIYGLSQTTTSMPSMWWEALPNRGLLTGPIEDHEDRYTGEAGGGCVLRGAEGEVFMAACLSLQRCWSVDLAEGWAMYKGSSLLASWDVSEVGRLMEDVRM
ILHPWDRSKVVFVPRQGIGWHMYWQAWPSLILTVFGLRKGLAKFLML