; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0008846 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008846
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr9:30974379..30975334
RNA-Seq ExpressionLag0008846
SyntenyLag0008846
Gene Ontology termsNA
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023913142.1 uncharacterized protein LOC112024740 [Quercus suber]4.6e-8050.33Show/hide
Query:  RVADFRPISLCNVSYKLISKALVNRMKNILPQLISQNQSAFIPGRCVVDNAILGFECIHELRKRTKGRTKWAAMKLDMSKAYDRVEWTFLREVMLRLG-P
        ++ DFRPISLCNV YK+ISK L NR+K ILPQLIS  QSAF+PGR + DN +L +E +H +  R KG+T+  A+KLD+SKAYDRVEW FL+ +M+RLG P
Subjt:  RVADFRPISLCNVSYKLISKALVNRMKNILPQLISQNQSAFIPGRCVVDNAILGFECIHELRKRTKGRTKWAAMKLDMSKAYDRVEWTFLREVMLRLG-P

Query:  GDTVS---------------------------GSSQGDPLSPYLFLLCAEGLSSLLRGAERRSQITGFRIGRSSPAISHLFFADDSLLFFRANGSEASVI
         + ++                           G  QGDPLSPYLFLLCAEG +SLL  AE   ++ G +I R +P IS+L FADDSL+F RAN  E  VI
Subjt:  GDTVS---------------------------GSSQGDPLSPYLFLLCAEGLSSLLRGAERRSQITGFRIGRSSPAISHLFFADDSLLFFRANGSEASVI

Query:  RDLLMWYEKASGQTINYEKSVVAFSPNTEDGARQYISQILSVSYCPCHQQYLGLPSFMPRNRTGTLKFIKDRIWRQIQGWKGKFFSTAGKEVLLKSIVQA
         + L  Y +ASGQ IN+EKS   FS NT +G RQ I Q L V        YLGLP+ + R++  T  ++K+R+W+++QGW+G+  S AGKEVL+K++ Q+
Subjt:  RDLLMWYEKASGQTINYEKSVVAFSPNTEDGARQYISQILSVSYCPCHQQYLGLPSFMPRNRTGTLKFIKDRIWRQIQGWKGKFFSTAGKEVLLKSIVQA

Query:  IPCYTM
        IP YTM
Subjt:  IPCYTM

XP_030498122.1 uncharacterized protein LOC115713779 [Cannabis sativa]2.5e-7846.3Show/hide
Query:  VADFRPISLCNVSYKLISKALVNRMKNILPQLISQNQSAFIPGRCVVDNAILGFECIHELRKRTKGRTKWAAMKLDMSKAYDRVEWTFLREVMLRLGPGD
        +  +RPISLCNV YKL+SK++V R++  LP +IS+ QSAF+  R + DN ++ FE +H L+ R +G   +AA+KLDMSKA+DRVEW ++ ++ML++G G 
Subjt:  VADFRPISLCNVSYKLISKALVNRMKNILPQLISQNQSAFIPGRCVVDNAILGFECIHELRKRTKGRTKWAAMKLDMSKAYDRVEWTFLREVMLRLGPGD

Query:  TV----------------------------SGSSQGDPLSPYLFLLCAEGLSSLLRGAERRSQITGFRIGRSSPAISHLFFADDSLLFFRANGSEASVIR
         +                             G  QGDPLSPYLFL+CAEGLS LL+  E    + G R+ R++P++SHLFFADDS+LF RAN   A  I+
Subjt:  TV----------------------------SGSSQGDPLSPYLFLLCAEGLSSLLRGAERRSQITGFRIGRSSPAISHLFFADDSLLFFRANGSEASVIR

Query:  DLLMWYEKASGQTINYEKSVVAFSPNTEDGARQYISQILSVSYCPCHQQYLGLPSFMPRNRTGTLKFIKDRIWRQIQGWKGKFFSTAGKEVLLKSIVQAI
         +L  Y +ASGQ +N +K V++FSPNT    + Y  Q+L++   PCH++YLGLPSF  R++T     I D+IW+ +  WK + FS  GKEVLLK++VQAI
Subjt:  DLLMWYEKASGQTINYEKSVVAFSPNTEDGARQYISQILSVSYCPCHQQYLGLPSFMPRNRTGTLKFIKDRIWRQIQGWKGKFFSTAGKEVLLKSIVQAI

Query:  PCYTMNCSGCP
        P Y M+C   P
Subjt:  PCYTMNCSGCP

XP_030923826.1 uncharacterized protein LOC115950728 [Quercus lobata]9.6e-7848.72Show/hide
Query:  RVADFRPISLCNVSYKLISKALVNRMKNILPQLISQNQSAFIPGRCVVDNAILGFECIHELRKRTKGRTKWAAMKLDMSKAYDRVEWTFLREVMLRLG--
        +++D+RPISLCNV YK+ISK L NR+K ILPQ+IS  QSAFIPGR + DN ++ +EC+H +  R KG+    A+KLD+SKAYDRVEW FL+ +M ++G  
Subjt:  RVADFRPISLCNVSYKLISKALVNRMKNILPQLISQNQSAFIPGRCVVDNAILGFECIHELRKRTKGRTKWAAMKLDMSKAYDRVEWTFLREVMLRLG--

Query:  -------------PGDTV-------------SGSSQGDPLSPYLFLLCAEGLSSLLRGAERRSQITGFRIGRSSPAISHLFFADDSLLFFRANGSEASVI
                     P  +V              G  QGDPLSPYLFLLCAEG +SLL  AE   QI G  I R +P IS+L FADDSLLF +A   E  V+
Subjt:  -------------PGDTV-------------SGSSQGDPLSPYLFLLCAEGLSSLLRGAERRSQITGFRIGRSSPAISHLFFADDSLLFFRANGSEASVI

Query:  RDLLMWYEKASGQTINYEKSVVAFSPNTEDGARQYISQILSVSYCPCHQQYLGLPSFMPRNRTGTLKFIKDRIWRQIQGWKGKFFSTAGKEVLLKSIVQA
         ++L  Y  ASGQ IN+EKS + F  NTE   ++ I  +L V      + YLGLP+ + R++  T  F+KDR+W+++QGWKGK  S AGKEVL+K++ Q+
Subjt:  RDLLMWYEKASGQTINYEKSVVAFSPNTEDGARQYISQILSVSYCPCHQQYLGLPSFMPRNRTGTLKFIKDRIWRQIQGWKGKFFSTAGKEVLLKSIVQA

Query:  IPCYTMNCSGCP
        IP YTM     P
Subjt:  IPCYTMNCSGCP

XP_030939975.1 uncharacterized protein LOC115964883 [Quercus lobata]9.6e-7847.76Show/hide
Query:  RVADFRPISLCNVSYKLISKALVNRMKNILPQLISQNQSAFIPGRCVVDNAILGFECIHELRKRTKGRTKWAAMKLDMSKAYDRVEWTFLREVMLRLGPG
        +  DFRPISLCNV YK++SK + NR+K +LP+L+S++QSAF+  R + DN ++ FE +H L+ +TKG++ + A+KLDMSKAYDRVEW FL +VM +LG  
Subjt:  RVADFRPISLCNVSYKLISKALVNRMKNILPQLISQNQSAFIPGRCVVDNAILGFECIHELRKRTKGRTKWAAMKLDMSKAYDRVEWTFLREVMLRLGPG

Query:  D-----------TVS-----------------GSSQGDPLSPYLFLLCAEGLSSLLRGAERRSQITGFRIGRSSPAISHLFFADDSLLFFRANGSEASVI
        +           +VS                 G  QGDPLSPYLFLLCAEGL SL++ AE    I G  +  + P +SHLFFADDSLLF RAN  EAS I
Subjt:  D-----------TVS-----------------GSSQGDPLSPYLFLLCAEGLSSLLRGAERRSQITGFRIGRSSPAISHLFFADDSLLFFRANGSEASVI

Query:  RDLLMWYEKASGQTINYEKSVVAFSPNTEDGARQYISQILSVSYCPCHQQYLGLPSFMPRNRTGTLKFIKDRIWRQIQGWKGKFFSTAGKEVLLKSIVQA
         ++L  YE+ASGQ IN EK+ + FSPNT+   ++ I  +L V+    +++YLGLPSF+ R +  +  +I++RIW ++QGWK +  S  G+EVL+K+++QA
Subjt:  RDLLMWYEKASGQTINYEKSVVAFSPNTEDGARQYISQILSVSYCPCHQQYLGLPSFMPRNRTGTLKFIKDRIWRQIQGWKGKFFSTAGKEVLLKSIVQA

Query:  IPCYTMNCSGCP
        +P +TM C   P
Subjt:  IPCYTMNCSGCP

XP_030969964.1 uncharacterized protein LOC115990257 [Quercus lobata]9.6e-7848.88Show/hide
Query:  RRVADFRPISLCNVSYKLISKALVNRMKNILPQLISQNQSAFIPGRCVVDNAILGFECIHELRKRTKGRTKWAAMKLDMSKAYDRVEWTFLREVMLRLG-
        ++V+DFRPISLCNV YKLI+K LVNR+K ILP ++S +QSAF+ GR + DN ++ FE +H L+++T+G+  + A+KLD+SKAYDRVEW FL   ML LG 
Subjt:  RRVADFRPISLCNVSYKLISKALVNRMKNILPQLISQNQSAFIPGRCVVDNAILGFECIHELRKRTKGRTKWAAMKLDMSKAYDRVEWTFLREVMLRLG-

Query:  ------------------------PGDTVS---GSSQGDPLSPYLFLLCAEGLSSLLRGAERRSQITGFRIGRSSPAISHLFFADDSLLFFRANGSEASV
                                 G T+    G  QGDPLSPYLFLLCA GL  LL  AE    I G  I ++ P +SHLFFADDS+LF RA  SE  V
Subjt:  ------------------------PGDTVS---GSSQGDPLSPYLFLLCAEGLSSLLRGAERRSQITGFRIGRSSPAISHLFFADDSLLFFRANGSEASV

Query:  IRDLLMWYEKASGQTINYEKSVVAFSPNTEDGARQYISQILSVSYCPCHQQYLGLPSFMPRNRTGTLKFIKDRIWRQIQGWKGKFFSTAGKEVLLKSIVQ
        I DLL  YE+ SGQ IN +K+ + F+ NT    +  I  +L V     +++YLGLP+F+ R +     +IK+RIW++IQGWK K  S AG+EVL+KS++Q
Subjt:  IRDLLMWYEKASGQTINYEKSVVAFSPNTEDGARQYISQILSVSYCPCHQQYLGLPSFMPRNRTGTLKFIKDRIWRQIQGWKGKFFSTAGKEVLLKSIVQ

Query:  AIPCYTMNCSGCP
        AIP Y+M+C   P
Subjt:  AIPCYTMNCSGCP

TrEMBL top hitse value%identityAlignment
A0A2N9F2M3 Uncharacterized protein5.5e-7950.16Show/hide
Query:  VADFRPISLCNVSYKLISKALVNRMKNILPQLISQNQSAFIPGRCVVDNAILGFECIHELRKRTKGRTKWAAMKLDMSKAYDRVEWTFLREVMLRLG---
        +A FRPISLCNV YK+ISK LVNRMK+ILPQ+IS +QSAF+PGR + DN +  FE +H L+    G+    A KLDMSKAYDRVEW FL+E+ L+LG   
Subjt:  VADFRPISLCNVSYKLISKALVNRMKNILPQLISQNQSAFIPGRCVVDNAILGFECIHELRKRTKGRTKWAAMKLDMSKAYDRVEWTFLREVMLRLG---

Query:  ----------------------PGDTVS---GSSQGDPLSPYLFLLCAEGLSSLLRGAERRSQITGFRIGRSSPAISHLFFADDSLLFFRANGSEASVIR
                              P   +    G  QGDPLSPYLFL+CAEGLS+LLR AER + I G  I R SP ISHLFFADDS++F RA  ++   + 
Subjt:  ----------------------PGDTVS---GSSQGDPLSPYLFLLCAEGLSSLLRGAERRSQITGFRIGRSSPAISHLFFADDSLLFFRANGSEASVIR

Query:  DLLMWYEKASGQTINYEKSVVAFSPNTEDGARQYISQILSVSYCPCHQQYLGLPSFMPRNRTGTLKFIKDRIWRQIQGWKGKFFSTAGKEVLLKSIVQAI
        + L  YE+ASGQ +N  K+ + FSPNT    R  I+ +   S     ++YLGLP  M R++      IKDR+WR++QGWK K  S AG+EVL+K+I+QAI
Subjt:  DLLMWYEKASGQTINYEKSVVAFSPNTEDGARQYISQILSVSYCPCHQQYLGLPSFMPRNRTGTLKFIKDRIWRQIQGWKGKFFSTAGKEVLLKSIVQAI

Query:  PCYTMNCSGCP
        P Y M+C   P
Subjt:  PCYTMNCSGCP

A0A2N9GQ35 Reverse transcriptase domain-containing protein1.9e-7948.4Show/hide
Query:  RVADFRPISLCNVSYKLISKALVNRMKNILPQLISQNQSAFIPGRCVVDNAILGFECIHELRKRTKGRTKWAAMKLDMSKAYDRVEWTFLREVMLRLGPG
        ++ DFRPI+LCNV YK+ISK L NR+K ILPQ++S++QSAF+PGR + DN ++ FE +H +  +  GR    A+KLDMSKAYDRVEW+FL  +M RLG  
Subjt:  RVADFRPISLCNVSYKLISKALVNRMKNILPQLISQNQSAFIPGRCVVDNAILGFECIHELRKRTKGRTKWAAMKLDMSKAYDRVEWTFLREVMLRLGPG

Query:  D---------------------------TVS-GSSQGDPLSPYLFLLCAEGLSSLLRGAERRSQITGFRIGRSSPAISHLFFADDSLLFFRANGSEASVI
        +                           T S G  QGD LSPYLFLLCAEGLS LLR AE   +ITG    RS P ++HLFFADDSLLF +AN S    +
Subjt:  D---------------------------TVS-GSSQGDPLSPYLFLLCAEGLSSLLRGAERRSQITGFRIGRSSPAISHLFFADDSLLFFRANGSEASVI

Query:  RDLLMWYEKASGQTINYEKSVVAFSPNTEDGARQYISQILSVSYCPCHQQYLGLPSFMPRNRTGTLKFIKDRIWRQIQGWKGKFFSTAGKEVLLKSIVQA
         ++L  YE+ASGQ +N  K+ + F+ NT    RQ I  +  V     H++YLGLPSF+ R+++     +K R+WR++ GWK KF S+AG+E+LLK++ Q+
Subjt:  RDLLMWYEKASGQTINYEKSVVAFSPNTEDGARQYISQILSVSYCPCHQQYLGLPSFMPRNRTGTLKFIKDRIWRQIQGWKGKFFSTAGKEVLLKSIVQA

Query:  IPCYTMNCSGCP
        IP YTM+C   P
Subjt:  IPCYTMNCSGCP

A0A2N9GY02 Reverse transcriptase domain-containing protein4.2e-7949.36Show/hide
Query:  RVADFRPISLCNVSYKLISKALVNRMKNILPQLISQNQSAFIPGRCVVDNAILGFECIHELRKRTKGRTKWAAMKLDMSKAYDRVEWTFLREVMLRLGPG
        RV+D+RPISLCNVS+KLISK   NR+K ILPQ+IS NQSAF+PGR + DN ++ FE +H ++K+  GR    A+KLDMSKAYDRVEW FLR +M +LG  
Subjt:  RVADFRPISLCNVSYKLISKALVNRMKNILPQLISQNQSAFIPGRCVVDNAILGFECIHELRKRTKGRTKWAAMKLDMSKAYDRVEWTFLREVMLRLGPG

Query:  -----------DTVS-----------------GSSQGDPLSPYLFLLCAEGLSSLLRGAERRSQITGFRIGRSSPAISHLFFADDSLLFFRANGSEASVI
                    TVS                 G  QGDPLSPYLFLLCAEGLSSL+R AER   I G R  R  P+ISHLFFADDSLLF +A  +     
Subjt:  -----------DTVS-----------------GSSQGDPLSPYLFLLCAEGLSSLLRGAERRSQITGFRIGRSSPAISHLFFADDSLLFFRANGSEASVI

Query:  RDLLMWYEKASGQTINYEKSVVAFSPNTEDGARQYISQILSVSYCPCHQQYLGLPSFMPRNRTGTLKFIKDRIWRQIQGWKGKFFSTAGKEVLLKSIVQA
        + +L  YE ASGQ +N EK+ + FS NT    +  ++ IL +       +YLGLPSF+ +++      I++R+W +++GWK KF S A +E+L+K++ QA
Subjt:  RDLLMWYEKASGQTINYEKSVVAFSPNTEDGARQYISQILSVSYCPCHQQYLGLPSFMPRNRTGTLKFIKDRIWRQIQGWKGKFFSTAGKEVLLKSIVQA

Query:  IPCYTMNCSGCP
        IP YTM+C   P
Subjt:  IPCYTMNCSGCP

A0A2N9I2P8 Reverse transcriptase domain-containing protein1.9e-7948.4Show/hide
Query:  RVADFRPISLCNVSYKLISKALVNRMKNILPQLISQNQSAFIPGRCVVDNAILGFECIHELRKRTKGRTKWAAMKLDMSKAYDRVEWTFLREVMLRLGPG
        ++ DFRPI+LCNV YK+ISK L NR+K ILPQ++S++QSAF+PGR + DN ++ FE +H +  +  GR    A+KLDMSKAYDRVEW+FL  +M RLG  
Subjt:  RVADFRPISLCNVSYKLISKALVNRMKNILPQLISQNQSAFIPGRCVVDNAILGFECIHELRKRTKGRTKWAAMKLDMSKAYDRVEWTFLREVMLRLGPG

Query:  D---------------------------TVS-GSSQGDPLSPYLFLLCAEGLSSLLRGAERRSQITGFRIGRSSPAISHLFFADDSLLFFRANGSEASVI
        +                           T S G  QGD LSPYLFLLCAEGLS LLR AE   +ITG    RS P ++HLFFADDSLLF +AN S    +
Subjt:  D---------------------------TVS-GSSQGDPLSPYLFLLCAEGLSSLLRGAERRSQITGFRIGRSSPAISHLFFADDSLLFFRANGSEASVI

Query:  RDLLMWYEKASGQTINYEKSVVAFSPNTEDGARQYISQILSVSYCPCHQQYLGLPSFMPRNRTGTLKFIKDRIWRQIQGWKGKFFSTAGKEVLLKSIVQA
         ++L  YE+ASGQ +N  K+ + F+ NT    RQ I  +  V     H++YLGLPSF+ R+++     +K R+WR++ GWK KF S+AG+E+LLK++ Q+
Subjt:  RDLLMWYEKASGQTINYEKSVVAFSPNTEDGARQYISQILSVSYCPCHQQYLGLPSFMPRNRTGTLKFIKDRIWRQIQGWKGKFFSTAGKEVLLKSIVQA

Query:  IPCYTMNCSGCP
        IP YTM+C   P
Subjt:  IPCYTMNCSGCP

A0A5B7BN08 Reverse transcriptase domain-containing protein4.8e-8349.52Show/hide
Query:  RRVADFRPISLCNVSYKLISKALVNRMKNILPQLISQNQSAFIPGRCVVDNAILGFECIHELRKRTKGRTKWAAMKLDMSKAYDRVEWTFLREVMLRLG-
        R++++FRPISLCNV YK+ISK L NR+K ILP +I+++QSAF+PGR + DN ++ FE IH L+ + KG+   +A+KLDMSKAYDRVEW+FL  VMLR+G 
Subjt:  RRVADFRPISLCNVSYKLISKALVNRMKNILPQLISQNQSAFIPGRCVVDNAILGFECIHELRKRTKGRTKWAAMKLDMSKAYDRVEWTFLREVMLRLG-

Query:  ---------------------PGD------TVSGSSQGDPLSPYLFLLCAEGLSSLLRGAERRSQITGFRIGRSSPAISHLFFADDSLLFFRANGSEASV
                              GD         G  QGDPLSPYLF+LCAE  S+LLR +E  ++I G  + R++P +SHLFFADDSLLF  A  ++AS 
Subjt:  ---------------------PGD------TVSGSSQGDPLSPYLFLLCAEGLSSLLRGAERRSQITGFRIGRSSPAISHLFFADDSLLFFRANGSEASV

Query:  IRDLLMWYEKASGQTINYEKSVVAFSPNTEDGARQYISQILSVSYCPCHQQYLGLPSFMPRNRTGTLKFIKDRIWRQIQGWKGKFFSTAGKEVLLKSIVQ
        I  ++  Y  ASGQ +N+EKS ++FS N     R+ I QIL VS C  H +YLGLPS + R++      I+DR+WR+++GWK K  S AG+EVL+KS+ Q
Subjt:  IRDLLMWYEKASGQTINYEKSVVAFSPNTEDGARQYISQILSVSYCPCHQQYLGLPSFMPRNRTGTLKFIKDRIWRQIQGWKGKFFSTAGKEVLLKSIVQ

Query:  AIPCYTMNCSGCP
        AIP Y M+C   P
Subjt:  AIPCYTMNCSGCP

SwissProt top hitse value%identityAlignment
O00370 LINE-1 retrotransposable element ORF2 protein2.8e-1626.64Show/hide
Query:  DFRPISLCNVSYKLISKALVNRMKNILPQLISQNQSAFIPGRCVVDNAILGFECIHELRKRTKGRTKWAAMKLDMSKAYDRVEWTFLREVMLRLG-----
        +FRPISL N+  K+++K L NR++  + +LI  +Q  FIPG     N       I  +  R K +     + +D  KA+D+++  F+ + + +LG     
Subjt:  DFRPISLCNVSYKLISKALVNRMKNILPQLISQNQSAFIPGRCVVDNAILGFECIHELRKRTKGRTKWAAMKLDMSKAYDRVEWTFLREVMLRLG-----

Query:  ----------PGDTV-------------SGSSQGDPLSPYLFLLCAEGLSSLLRGAERRSQITGFRIGRSSPAISHLFFADDSLLFFRANGSEASVIRDL
                  P   +             +G+ QG PLSP LF +  E L+  +R   +  +I G ++G+    +S   FADD +++       A  +  L
Subjt:  ----------PGDTV-------------SGSSQGDPLSPYLFLLCAEGLSSLLRGAERRSQITGFRIGRSSPAISHLFFADDSLLFFRANGSEASVIRDL

Query:  LMWYEKASGQTINYEKSVVAFSPNTEDGARQYISQILSVSYCPCHQQYLGL------PSFMPRNRTGTLKFIKD--RIWRQIQ-GWKGK
        +  + K SG  IN +KS  AF  N        I   L  +      +YLG+            N    LK IK+    W+ I   W G+
Subjt:  LMWYEKASGQTINYEKSVVAFSPNTEDGARQYISQILSVSYCPCHQQYLGL------PSFMPRNRTGTLKFIKD--RIWRQIQ-GWKGK

P08548 LINE-1 reverse transcriptase homolog2.6e-1724.12Show/hide
Query:  RVADFRPISLCNVSYKLISKALVNRMKNILPQLISQNQSAFIPGRCVVDNAILGFECIHELRKRTKGRTKWAAMKLDMSKAYDRVEWTFLREVMLRLGPG
        R  ++RPISL N+  K+++K L NR++  + ++I  +Q  FIPG     N       I  + K          + +D  KA+D ++  F+   + ++G  
Subjt:  RVADFRPISLCNVSYKLISKALVNRMKNILPQLISQNQSAFIPGRCVVDNAILGFECIHELRKRTKGRTKWAAMKLDMSKAYDRVEWTFLREVMLRLGPG

Query:  DTV----------------------------SGSSQGDPLSPYLFLLCAEGLSSLLRGAERRSQITGFRIGRSSPAISHLFFADDSLLFFRANGSEASVI
         T                             SG+ QG PLSP LF +  E L+  +R       I G  IG  S  I    FADD +++        + +
Subjt:  DTV----------------------------SGSSQGDPLSPYLFLLCAEGLSSLLRGAERRSQITGFRIGRSSPAISHLFFADDSLLFFRANGSEASVI

Query:  RDLLMWYEKASGQTINYEKSVVAFSPNTEDGARQYISQILSVSYCPCHQQYLGLPSFMPRNRTGTLK----FIKDRIWRQIQGWKGKFFSTAGKEVLLKS
         +++  Y   SG  IN  KS VAF     + A + +   +  +  P   +YLG+  ++ ++     K     ++  I   +  WK    S  G+  ++K 
Subjt:  RDLLMWYEKASGQTINYEKSVVAFSPNTEDGARQYISQILSVSYCPCHQQYLGLPSFMPRNRTGTLK----FIKDRIWRQIQGWKGKFFSTAGKEVLLKS

Query:  IVQAIPCYTMN
         +     Y  N
Subjt:  IVQAIPCYTMN

P11369 LINE-1 retrotransposable element ORF2 protein1.8e-1826.21Show/hide
Query:  RVADFRPISLCNVSYKLISKALVNRMKNILPQLISQNQSAFIPGRCVVDNAILGFECIHELRKRTKGRTKWAAMKLDMSKAYDRVEWTFLREVMLRLG--
        ++ +FRPISL N+  K+++K L NR++  +  +I  +Q  FIPG     N       IH + K          + LD  KA+D+++  F+ +V+ R G  
Subjt:  RVADFRPISLCNVSYKLISKALVNRMKNILPQLISQNQSAFIPGRCVVDNAILGFECIHELRKRTKGRTKWAAMKLDMSKAYDRVEWTFLREVMLRLG--

Query:  --------------------PGDTV------SGSSQGDPLSPYLFLLCAEGLSSLLRGAERRSQITGFRIGRSSPAISHLFFADDSLLFFRANGSEASVI
                             G+ +      SG+ QG PLSPYLF +  E L+  +R   ++ +I G +IG+    IS L  ADD +++     +    +
Subjt:  --------------------PGDTV------SGSSQGDPLSPYLFLLCAEGLSSLLRGAERRSQITGFRIGRSSPAISHLFFADDSLLFFRANGSEASVI

Query:  RDLLMWYEKASGQTINYEKSVVAFSPNTEDGARQYISQILSVSYCPCHQQYLG--LPSFMPRNRTGTLKFIKDRIWRQIQGWKGKFFSTAGKEVLLKSIV
         +L+  + +  G  IN  KS +AF       A + I +    S    + +YLG  L   +        K +K  I   ++ WK    S  G+  ++K  +
Subjt:  RDLLMWYEKASGQTINYEKSVVAFSPNTEDGARQYISQILSVSYCPCHQQYLG--LPSFMPRNRTGTLKFIKDRIWRQIQGWKGKFFSTAGKEVLLKSIV

Query:  QAIPCYTMN
             Y  N
Subjt:  QAIPCYTMN

P14381 Transposon TX1 uncharacterized 149 kDa protein2.7e-1424Show/hide
Query:  RRVADFRPISLCNVSYKLISKALVNRMKNILPQLISQNQSAFIPGRCVVDNAILGFECIHELRKRTKGRTKWAAMKLDMSKAYDRVEWTFL---------
        R + ++RP+SL +  YK+++KA+  R+K++L ++I  +QS  +PGR + DN  L  + +H  R+        A + LD  KA+DRV+  +L         
Subjt:  RRVADFRPISLCNVSYKLISKALVNRMKNILPQLISQNQSAFIPGRCVVDNAILGFECIHELRKRTKGRTKWAAMKLDMSKAYDRVEWTFL---------

Query:  --------------REVMLRLGPGDTV-----SGSSQGDPLSPYLFLLCAEGLSSLLRGAERRSQITGFRIGRSSPAISHLFFADDSLLFFRANGSEASV
                       E ++++    T       G  QG PLS  L+ L  E    LL     R ++TG  +      +    +ADD +L  + +  +   
Subjt:  --------------REVMLRLGPGDTV-----SGSSQGDPLSPYLFLLCAEGLSSLLRGAERRSQITGFRIGRSSPAISHLFFADDSLLFFRANGSEASV

Query:  IRDLLMWYEKASGQTINYEKS--------VVAFSP------NTEDGARQYISQILSVSYCPCHQQYLGLPSFMPRNRTGTLKFIKDRIWRQIQGWKG--K
         ++    Y  AS   IN+ KS         V F P      + E    +Y+   LS    P  Q ++ L               ++ +  ++  WKG  K
Subjt:  IRDLLMWYEKASGQTINYEKS--------VVAFSP------NTEDGARQYISQILSVSYCPCHQQYLGLPSFMPRNRTGTLKFIKDRIWRQIQGWKG--K

Query:  FFSTAGKEVLLKSIVQAIPCYTMNC
          S  G+ +++  +V +   Y + C
Subjt:  FFSTAGKEVLLKSIVQAIPCYTMNC

P92555 Uncharacterized mitochondrial protein AtMg012508.0e-1155.56Show/hide
Query:  GSSQGDPLSPYLFLLCAEGLSSLLRGAERRSQITGFRIGRSSPAISHLFFADDS
        G  QGDPLSPYLF+LC E LS L R A+ + ++ G R+  +SP I+HL FADD+
Subjt:  GSSQGDPLSPYLFLLCAEGLSSLLRGAERRSQITGFRIGRSSPAISHLFFADDS

Arabidopsis top hitse value%identityAlignment
AT4G20520.1 RNA binding;RNA-directed DNA polymerases1.1e-1240.26Show/hide
Query:  LVNRMKNILPQLISQNQSAFIPGRCVVDNAILGFECIHELRKRTKGRTKWAAMKLDMSKAYDRVEWTFLREVMLRLG
        +V R+K ++  LI   Q++FIPGR   DN +   E +H +R R KG   W  +KLD+ KAYDR+ W +L + ++  G
Subjt:  LVNRMKNILPQLISQNQSAFIPGRCVVDNAILGFECIHELRKRTKGRTKWAAMKLDMSKAYDRVEWTFLREVMLRLG

ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase)5.7e-1255.56Show/hide
Query:  GSSQGDPLSPYLFLLCAEGLSSLLRGAERRSQITGFRIGRSSPAISHLFFADDS
        G  QGDPLSPYLF+LC E LS L R A+ + ++ G R+  +SP I+HL FADD+
Subjt:  GSSQGDPLSPYLFLLCAEGLSSLLRGAERRSQITGFRIGRSSPAISHLFFADDS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCCCGACGGGTTGCAGACTTTAGGCCTATTTCCCTCTGCAATGTGAGTTACAAGCTGATCTCAAAGGCCTTAGTTAACCGGATGAAGAATATCTTGCCGCAGCT
AATCTCACAGAATCAGAGTGCTTTTATTCCAGGGCGGTGTGTGGTGGATAATGCCATTCTGGGATTCGAGTGTATTCATGAGCTCCGTAAGAGAACCAAGGGGAGGACTA
AGTGGGCTGCGATGAAGCTTGATATGAGTAAGGCCTATGATAGGGTGGAGTGGACTTTCCTTCGAGAGGTTATGCTACGATTGGGGCCAGGTGATACCGTCTCGGGGTCT
TCGCAAGGGGATCCTCTTTCTCCATACTTGTTTCTGTTATGTGCTGAGGGACTGTCCAGCCTGCTGCGGGGTGCTGAACGGAGATCTCAGATTACTGGCTTTCGGATTGG
GCGCTCTAGCCCAGCGATCTCACACCTCTTCTTCGCAGACGATAGTCTACTGTTTTTCAGGGCAAATGGGAGTGAGGCGTCGGTCATCCGGGATCTATTGATGTGGTATG
AGAAAGCTTCAGGACAGACTATCAATTATGAAAAGTCTGTTGTTGCTTTTAGCCCGAATACGGAGGATGGGGCGCGACAGTATATTAGCCAAATCCTATCTGTGTCTTAT
TGCCCATGCCATCAGCAGTACCTTGGCCTTCCTTCATTTATGCCTCGTAATCGGACTGGGACGTTGAAGTTTATAAAGGACCGTATCTGGCGGCAGATTCAGGGATGGAA
GGGGAAGTTTTTTTCAACTGCAGGGAAGGAAGTTTTGCTTAAGTCTATAGTTCAAGCTATCCCTTGCTACACGATGAACTGTTCCGGTTGCCCAGGGGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCCCGACGGGTTGCAGACTTTAGGCCTATTTCCCTCTGCAATGTGAGTTACAAGCTGATCTCAAAGGCCTTAGTTAACCGGATGAAGAATATCTTGCCGCAGCT
AATCTCACAGAATCAGAGTGCTTTTATTCCAGGGCGGTGTGTGGTGGATAATGCCATTCTGGGATTCGAGTGTATTCATGAGCTCCGTAAGAGAACCAAGGGGAGGACTA
AGTGGGCTGCGATGAAGCTTGATATGAGTAAGGCCTATGATAGGGTGGAGTGGACTTTCCTTCGAGAGGTTATGCTACGATTGGGGCCAGGTGATACCGTCTCGGGGTCT
TCGCAAGGGGATCCTCTTTCTCCATACTTGTTTCTGTTATGTGCTGAGGGACTGTCCAGCCTGCTGCGGGGTGCTGAACGGAGATCTCAGATTACTGGCTTTCGGATTGG
GCGCTCTAGCCCAGCGATCTCACACCTCTTCTTCGCAGACGATAGTCTACTGTTTTTCAGGGCAAATGGGAGTGAGGCGTCGGTCATCCGGGATCTATTGATGTGGTATG
AGAAAGCTTCAGGACAGACTATCAATTATGAAAAGTCTGTTGTTGCTTTTAGCCCGAATACGGAGGATGGGGCGCGACAGTATATTAGCCAAATCCTATCTGTGTCTTAT
TGCCCATGCCATCAGCAGTACCTTGGCCTTCCTTCATTTATGCCTCGTAATCGGACTGGGACGTTGAAGTTTATAAAGGACCGTATCTGGCGGCAGATTCAGGGATGGAA
GGGGAAGTTTTTTTCAACTGCAGGGAAGGAAGTTTTGCTTAAGTCTATAGTTCAAGCTATCCCTTGCTACACGATGAACTGTTCCGGTTGCCCAGGGGACTGA
Protein sequenceShow/hide protein sequence
MAARRVADFRPISLCNVSYKLISKALVNRMKNILPQLISQNQSAFIPGRCVVDNAILGFECIHELRKRTKGRTKWAAMKLDMSKAYDRVEWTFLREVMLRLGPGDTVSGS
SQGDPLSPYLFLLCAEGLSSLLRGAERRSQITGFRIGRSSPAISHLFFADDSLLFFRANGSEASVIRDLLMWYEKASGQTINYEKSVVAFSPNTEDGARQYISQILSVSY
CPCHQQYLGLPSFMPRNRTGTLKFIKDRIWRQIQGWKGKFFSTAGKEVLLKSIVQAIPCYTMNCSGCPGD