; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0008847 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008847
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr9:30975393..30976124
RNA-Seq ExpressionLag0008847
SyntenyLag0008847
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]2.1e-4144.39Show/hide
Query:  KAKTCMQTMAGWGRSKSGDFPRRIRIANQKVQSAIADLRATDSRDLLVQAEAQLEEVLQEEEVYWKQRSRELWLREGDRNTRWFHCRASYRRRLNRIGGL
        K   C+ ++  WGR+K+G+F  R+++A   +QSAI DL    +R+   QA   + ++L+EEE++W+QRSR+LW + GDRNT+WFH +AS+RRR N I GL
Subjt:  KAKTCMQTMAGWGRSKSGDFPRRIRIANQKVQSAIADLRATDSRDLLVQAEAQLEEVLQEEEVYWKQRSRELWLREGDRNTRWFHCRASYRRRLNRIGGL

Query:  EDSQGVWQQEKRAVVQVVVDYFQHLFASSRPSVRDFEVALQGLSPVVSDDMNQALLRPFTEDEILLALRQTHPNKAPGPDGLPGLFIRIIGVLLGQ
         D QG W++ K  VV ++  YF  LF+SSRPSV   E     +   VS   N  LL+PF E+E+++AL Q HP+KA GPD     F +    ++GQ
Subjt:  EDSQGVWQQEKRAVVQVVVDYFQHLFASSRPSVRDFEVALQGLSPVVSDDMNQALLRPFTEDEILLALRQTHPNKAPGPDGLPGLFIRIIGVLLGQ

XP_023874626.1 uncharacterized protein LOC111987155 [Quercus suber]2.0e-3636.94Show/hide
Query:  FEETWLRQSELRQLVESSWGAGPGGPGDVTPLVIANKAKTCMQTMAGWGRSKSGDFPRRIRIANQKVQSAIADLRATDSRDLLVQAEAQLEEVLQEEEVY
        FE  W R+   R+++E +W      P       ++++ ++C +++  W RS  G+  + +R    ++Q         D    +   + ++ E L +EE+ 
Subjt:  FEETWLRQSELRQLVESSWGAGPGGPGDVTPLVIANKAKTCMQTMAGWGRSKSGDFPRRIRIANQKVQSAIADLRATDSRDLLVQAEAQLEEVLQEEEVY

Query:  WKQRSRELWLREGDRNTRWFHCRASYRRRLNRIGGLEDSQGVWQQEKRAVVQVVVDYFQHLFASSRPSVRDFEVALQGLSPVVSDDMNQALLRPFTEDEI
        WKQRSR LWL  GDRNT++FH  AS RRR NRIGGL + QGVW +++  + ++++DYF  +F S  PS   F+ +L  +S  VS++MN  LL  F  +E+
Subjt:  WKQRSRELWLREGDRNTRWFHCRASYRRRLNRIGGLEDSQGVWQQEKRAVVQVVVDYFQHLFASSRPSVRDFEVALQGLSPVVSDDMNQALLRPFTEDEI

Query:  LLALRQTHPNKAPGPDGLPGLF
         +AL+Q HP KAPGPDG+  +F
Subjt:  LLALRQTHPNKAPGPDGLPGLF

XP_023878301.1 uncharacterized protein LOC111990748 [Quercus suber]7.6e-3634.96Show/hide
Query:  FEETWLRQSELRQLVESSWGAGPGGPGDV-TPLVIANKAKTCMQTMAGWGRSKSGDFPRRIRIANQKVQSAIADLRATDSRDLLVQAEAQLEEV---LQE
        FE  W ++ + + ++E+SWG G     D+ TP  I+   + C   ++ W  +  G  P++I+    ++ +    +R  D  DL ++     EE+   L +
Subjt:  FEETWLRQSELRQLVESSWGAGPGGPGDV-TPLVIANKAKTCMQTMAGWGRSKSGDFPRRIRIANQKVQSAIADLRATDSRDLLVQAEAQLEEV---LQE

Query:  EEVYWKQRSRELWLREGDRNTRWFHCRASYRRRLNRIGGLEDSQGVWQQEKRAVVQVVVDYFQHLFASSRPSVRDFEVALQGLSPVVSDDMNQALLRPFT
        EE YW QR++  WL+EGDRNT++FH +AS RR+ N I G+ D QG W   + ++ Q  + YF ++++SS PS    E   + +   V+++MN++L+R FT
Subjt:  EEVYWKQRSRELWLREGDRNTRWFHCRASYRRRLNRIGGLEDSQGVWQQEKRAVVQVVVDYFQHLFASSRPSVRDFEVALQGLSPVVSDDMNQALLRPFT

Query:  EDEILLALRQTHPNKAPGPDGLPGLFIR----IIGVLLGQMSLRVV
        ++E+ +AL+Q HPNKAPGPDG+  +F +    I+G  +  M L V+
Subjt:  EDEILLALRQTHPNKAPGPDGLPGLFIR----IIGVLLGQMSLRVV

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]7.6e-3637.33Show/hide
Query:  FEETWLRQSELRQLVESSWGAGPGGPGDVTPLVIANK-AKTCMQTMAGWGRSKSGDFPRRIRIANQKVQSAIADLRATDSRDLLVQAEAQLEEVLQEEEV
        +E+ W      + +V+  W  G G      P+ I  K +  C+  +  W R++      +++   +K+     +    +    +   E Q+E++L +EEV
Subjt:  FEETWLRQSELRQLVESSWGAGPGGPGDVTPLVIANK-AKTCMQTMAGWGRSKSGDFPRRIRIANQKVQSAIADLRATDSRDLLVQAEAQLEEVLQEEEV

Query:  YWKQRSRELWLREGDRNTRWFHCRASYRRRLNRIGGLEDSQGVWQQEKRAVVQVVVDYFQHLFASSRPSVRDFEVALQGLSPVVSDDMNQALLRPFTEDE
        YWKQRSR  WL+EGD+NT++FH +AS R+R NRI G+ D   VW  ++  V +   +YF  LF +S PS +  E AL GL P V+ +MN  L  PFTE+E
Subjt:  YWKQRSRELWLREGDRNTRWFHCRASYRRRLNRIGGLEDSQGVWQQEKRAVVQVVVDYFQHLFASSRPSVRDFEVALQGLSPVVSDDMNQALLRPFTEDE

Query:  ILLALRQTHPNKAPGPDGLPGLFIR
        +  AL Q  P KAPGPDGLP  F +
Subjt:  ILLALRQTHPNKAPGPDGLPGLFIR

XP_030487287.1 uncharacterized protein LOC115704210 [Cannabis sativa]9.9e-3637.61Show/hide
Query:  RFEETWLRQSELRQLVESSWGAGPGGPGDVTPLVIANKAKTCMQTMAGWGRSKSGDFPRRIRIANQKVQSAIADLRATDSRDLLVQAEAQLE--EVLQEE
        RFE  W R+    Q+V+S W +        T L +  K   C + +  WGRS + DF +RIR +  K+ S       TD   +      Q    E+L ++
Subjt:  RFEETWLRQSELRQLVESSWGAGPGGPGDVTPLVIANKAKTCMQTMAGWGRSKSGDFPRRIRIANQKVQSAIADLRATDSRDLLVQAEAQLE--EVLQEE

Query:  EVYWKQRSRELWLREGDRNTRWFHCRASYRRRLNRIGGLEDSQGVWQQEKRAVVQVVVDYFQHLFASSRPSVRDFEVALQGLSPVVSDDMNQALLRPFTE
        E+YWKQRS++ WL  GD+N+++FH  AS R+R N I  L+D+ GVWQ     + +V+VDY++H++ +      D+   + G+S  ++D  N  LL+P + 
Subjt:  EVYWKQRSRELWLREGDRNTRWFHCRASYRRRLNRIGGLEDSQGVWQQEKRAVVQVVVDYFQHLFASSRPSVRDFEVALQGLSPVVSDDMNQALLRPFTE

Query:  DEILLALRQTHPNKAPGPDGL-PGLF
        DE+  AL Q HP+KAPGPDG+ PG F
Subjt:  DEILLALRQTHPNKAPGPDGL-PGLF

TrEMBL top hitse value%identityAlignment
A0A2N9EDY7 Reverse transcriptase domain-containing protein6.1e-3938.36Show/hide
Query:  RFEETWLRQSELRQLVESSWGAGPGGPGDVTPLVIANKAKTCMQTMAGWGRSKSGDFPRRIRIANQKVQSAIADLRATDSRDLLVQAEAQLEEVLQEEEV
        RFEE W   +   + ++++W +   G        +A K KTC + +  W R K G   R++R   ++   A  +     S D L + ++++  +L++EE 
Subjt:  RFEETWLRQSELRQLVESSWGAGPGGPGDVTPLVIANKAKTCMQTMAGWGRSKSGDFPRRIRIANQKVQSAIADLRATDSRDLLVQAEAQLEEVLQEEEV

Query:  YWKQRSRELWLREGDRNTRWFHCRASYRRRLNRIGGLEDSQGVWQQEKRAVVQVVVDYFQHLFASSRPSVRDFEVALQGLSPVVSDDMNQALLRPFTEDE
         W+QRSR  WLREGDRNTR+FH RAS RRR NRI GL+D QGVW++EK     +++ +F+ +F +S P   + E A+  +  ++S ++N +L   FT  E
Subjt:  YWKQRSRELWLREGDRNTRWFHCRASYRRRLNRIGGLEDSQGVWQQEKRAVVQVVVDYFQHLFASSRPSVRDFEVALQGLSPVVSDDMNQALLRPFTEDE

Query:  ILLALRQTHPNKAPGPDGLPGLFIRIIGVLLG
        + LAL+Q  P KAPGPDG+P LF +    L+G
Subjt:  ILLALRQTHPNKAPGPDGLPGLFIRIIGVLLG

A0A2N9GPZ7 Reverse transcriptase domain-containing protein8.2e-4438.03Show/hide
Query:  RFEETWLRQSELRQLVESSWGAG--PGGPGDVTPLVIANKAKTCMQTMAGWGRSKSGDFPRRIRIANQKVQSAIADLRATDSRDLLVQAEAQLEEVLQEE
        RFE  W++  + R++++ +WG G   G P      ++  K K C  ++ GW R + G     I+   +++Q  I +  +  S  +L + +  L  +L++E
Subjt:  RFEETWLRQSELRQLVESSWGAG--PGGPGDVTPLVIANKAKTCMQTMAGWGRSKSGDFPRRIRIANQKVQSAIADLRATDSRDLLVQAEAQLEEVLQEE

Query:  EVYWKQRSRELWLREGDRNTRWFHCRASYRRRLNRIGGLEDSQGVWQQEKRAVVQVVVDYFQHLFASSRPSVRDFEVALQGLSPVVSDDMNQALLRPFTE
        E++W+QRSR  W+ EGD+NT++FH + + RRR N I GL D  GVWQ EK  + ++ VDYFQ +F SS PS       LQG+  VV++ MN  L   FT+
Subjt:  EVYWKQRSRELWLREGDRNTRWFHCRASYRRRLNRIGGLEDSQGVWQQEKRAVVQVVVDYFQHLFASSRPSVRDFEVALQGLSPVVSDDMNQALLRPFTE

Query:  DEILLALRQTHPNKAPGPDGLPGLFIRIIGVLLG
        DE+ LAL+Q +P KAPGPDG+  +F +    ++G
Subjt:  DEILLALRQTHPNKAPGPDGLPGLFIRIIGVLLG

A0A2N9IDC0 Uncharacterized protein7.9e-3933.19Show/hide
Query:  RFEETWLRQSELRQLVESSWGAGPGGPGDVTPLVIANKAKTCMQTMAGWGRSKSGDFPRRIRIANQKVQSAIADLRATDSRDLLVQAEAQLEEVLQEEEV
        +FE  W ++ E R ++E++WG        +  ++   K K C  ++  W R K G F   I+   + +Q  + +    DS   +++ + +L  +L++EE+
Subjt:  RFEETWLRQSELRQLVESSWGAGPGGPGDVTPLVIANKAKTCMQTMAGWGRSKSGDFPRRIRIANQKVQSAIADLRATDSRDLLVQAEAQLEEVLQEEEV

Query:  YWKQRSRELWLREGDRNTRWFHCRASYRRRLNRIGGLEDSQGVWQQEKRAVVQVVVDYFQHLFASSRPSVRDFEVALQGLSPVVSDDMNQALLRPFTEDE
        +W+QRSR  W+ EGD+NT++FH + ++RR+LN I GL D+ GVWQ +K  ++++ VDYF+ +F S  P +   +  L+G+  +V+ ++N  L+  FT  E
Subjt:  YWKQRSRELWLREGDRNTRWFHCRASYRRRLNRIGGLEDSQGVWQQEKRAVVQVVVDYFQHLFASSRPSVRDFEVALQGLSPVVSDDMNQALLRPFTEDE

Query:  ILLALRQTHPNKAPGPDGLPGLFIRIIGVLLG
        ++ AL+  +P KAPGPDG+  +F +    ++G
Subjt:  ILLALRQTHPNKAPGPDGLPGLFIRIIGVLLG

A0A2N9IPS8 Reverse transcriptase domain-containing protein8.2e-4438.03Show/hide
Query:  RFEETWLRQSELRQLVESSWGAG--PGGPGDVTPLVIANKAKTCMQTMAGWGRSKSGDFPRRIRIANQKVQSAIADLRATDSRDLLVQAEAQLEEVLQEE
        RFE  W++  + R++++ +WG G   G P      ++  K K C  ++ GW R + G     I+   +++Q  I +  +  S  +L + +  L  +L++E
Subjt:  RFEETWLRQSELRQLVESSWGAG--PGGPGDVTPLVIANKAKTCMQTMAGWGRSKSGDFPRRIRIANQKVQSAIADLRATDSRDLLVQAEAQLEEVLQEE

Query:  EVYWKQRSRELWLREGDRNTRWFHCRASYRRRLNRIGGLEDSQGVWQQEKRAVVQVVVDYFQHLFASSRPSVRDFEVALQGLSPVVSDDMNQALLRPFTE
        E++W+QRSR  W+ EGD+NT++FH + + RRR N I GL D  GVWQ EK  + ++ VDYFQ +F SS PS       LQG+  VV++ MN  L   FT+
Subjt:  EVYWKQRSRELWLREGDRNTRWFHCRASYRRRLNRIGGLEDSQGVWQQEKRAVVQVVVDYFQHLFASSRPSVRDFEVALQGLSPVVSDDMNQALLRPFTE

Query:  DEILLALRQTHPNKAPGPDGLPGLFIRIIGVLLG
        DE+ LAL+Q +P KAPGPDG+  +F +    ++G
Subjt:  DEILLALRQTHPNKAPGPDGLPGLFIRIIGVLLG

A0A6J1DAR4 uncharacterized protein LOC1110189541.0e-4144.39Show/hide
Query:  KAKTCMQTMAGWGRSKSGDFPRRIRIANQKVQSAIADLRATDSRDLLVQAEAQLEEVLQEEEVYWKQRSRELWLREGDRNTRWFHCRASYRRRLNRIGGL
        K   C+ ++  WGR+K+G+F  R+++A   +QSAI DL    +R+   QA   + ++L+EEE++W+QRSR+LW + GDRNT+WFH +AS+RRR N I GL
Subjt:  KAKTCMQTMAGWGRSKSGDFPRRIRIANQKVQSAIADLRATDSRDLLVQAEAQLEEVLQEEEVYWKQRSRELWLREGDRNTRWFHCRASYRRRLNRIGGL

Query:  EDSQGVWQQEKRAVVQVVVDYFQHLFASSRPSVRDFEVALQGLSPVVSDDMNQALLRPFTEDEILLALRQTHPNKAPGPDGLPGLFIRIIGVLLGQ
         D QG W++ K  VV ++  YF  LF+SSRPSV   E     +   VS   N  LL+PF E+E+++AL Q HP+KA GPD     F +    ++GQ
Subjt:  EDSQGVWQQEKRAVVQVVVDYFQHLFASSRPSVRDFEVALQGLSPVVSDDMNQALLRPFTEDEILLALRQTHPNKAPGPDGLPGLFIRIIGVLLGQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein1.2e-0726.15Show/hide
Query:  AKTCMQTMAGWGRSKSGDFPRRIRIANQKVQSAIADLRATDSRDLLVQAEAQLEEVLQEE--------EVYWKQRSRELWLREGDRNTRWFHCRASYRRR
        AK C + +    R   G+   + + A   ++S  + L    S  L      ++E V +++        E +++Q+SR  WL++GD NTR+FH      + 
Subjt:  AKTCMQTMAGWGRSKSGDFPRRIRIANQKVQSAIADLRATDSRDLLVQAEAQLEEVLQEE--------EVYWKQRSRELWLREGDRNTRWFHCRASYRRR

Query:  LNRIGGLEDSQGVWQQEKRAVVQVVVDYFQHLFASSRPSVR-DFEVALQGLSPVVSDDMNQALLRPFTED-EILLALRQTHPNKAPGPDGLPGLF
         N I  L     V  +    V +++V Y+ HL  S    +  D    ++ + P   +D   + L     D EI  A+     NKAPGPD     F
Subjt:  LNRIGGLEDSQGVWQQEKRAVVQVVVDYFQHLFASSRPSVR-DFEVALQGLSPVVSDDMNQALLRPFTED-EILLALRQTHPNKAPGPDGLPGLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGTTTGAGGAAACTTGGCTTAGGCAGTCTGAGTTGCGGCAGTTGGTTGAGAGTTCGTGGGGTGCAGGGCCTGGAGGGCCTGGTGATGTTACGCCTTTAGTTATTGC
TAATAAGGCTAAAACTTGTATGCAAACGATGGCTGGTTGGGGTCGATCAAAGTCCGGGGATTTCCCGAGGCGCATTAGAATTGCTAACCAGAAGGTACAGTCTGCCATCG
CTGATCTTAGAGCAACTGACTCTCGTGATTTGCTTGTCCAGGCAGAGGCGCAGTTGGAGGAGGTACTGCAAGAAGAGGAGGTATATTGGAAGCAGAGGTCTAGGGAACTG
TGGCTTCGAGAGGGGGACCGCAATACTAGATGGTTCCACTGTCGGGCCTCTTATCGTCGGAGGTTGAATCGTATTGGAGGGTTGGAGGACAGCCAGGGAGTGTGGCAGCA
GGAGAAGAGGGCAGTGGTCCAGGTGGTGGTTGACTACTTCCAGCACCTTTTTGCTTCATCGAGGCCCAGCGTCCGGGATTTTGAGGTGGCTCTGCAGGGTCTGAGTCCTG
TAGTAAGTGATGACATGAATCAGGCACTGTTACGCCCGTTTACTGAGGATGAGATTCTGTTGGCATTAAGACAGACACACCCTAATAAAGCCCCTGGTCCGGATGGGTTG
CCGGGACTTTTTATAAGAATCATTGGGGTATTGTTGGGTCAGATGTCACTCAGAGTTGTTTGGCAGTCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGGTTTGAGGAAACTTGGCTTAGGCAGTCTGAGTTGCGGCAGTTGGTTGAGAGTTCGTGGGGTGCAGGGCCTGGAGGGCCTGGTGATGTTACGCCTTTAGTTATTGC
TAATAAGGCTAAAACTTGTATGCAAACGATGGCTGGTTGGGGTCGATCAAAGTCCGGGGATTTCCCGAGGCGCATTAGAATTGCTAACCAGAAGGTACAGTCTGCCATCG
CTGATCTTAGAGCAACTGACTCTCGTGATTTGCTTGTCCAGGCAGAGGCGCAGTTGGAGGAGGTACTGCAAGAAGAGGAGGTATATTGGAAGCAGAGGTCTAGGGAACTG
TGGCTTCGAGAGGGGGACCGCAATACTAGATGGTTCCACTGTCGGGCCTCTTATCGTCGGAGGTTGAATCGTATTGGAGGGTTGGAGGACAGCCAGGGAGTGTGGCAGCA
GGAGAAGAGGGCAGTGGTCCAGGTGGTGGTTGACTACTTCCAGCACCTTTTTGCTTCATCGAGGCCCAGCGTCCGGGATTTTGAGGTGGCTCTGCAGGGTCTGAGTCCTG
TAGTAAGTGATGACATGAATCAGGCACTGTTACGCCCGTTTACTGAGGATGAGATTCTGTTGGCATTAAGACAGACACACCCTAATAAAGCCCCTGGTCCGGATGGGTTG
CCGGGACTTTTTATAAGAATCATTGGGGTATTGTTGGGTCAGATGTCACTCAGAGTTGTTTGGCAGTCCTGA
Protein sequenceShow/hide protein sequence
MRFEETWLRQSELRQLVESSWGAGPGGPGDVTPLVIANKAKTCMQTMAGWGRSKSGDFPRRIRIANQKVQSAIADLRATDSRDLLVQAEAQLEEVLQEEEVYWKQRSREL
WLREGDRNTRWFHCRASYRRRLNRIGGLEDSQGVWQQEKRAVVQVVVDYFQHLFASSRPSVRDFEVALQGLSPVVSDDMNQALLRPFTEDEILLALRQTHPNKAPGPDGL
PGLFIRIIGVLLGQMSLRVVWQS