| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6605170.1 RNA polymerase sigma factor sigA, partial [Cucurbita argyrosperma subsp. sororia] | 3.3e-267 | 94.69 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPWIHNTTIWEDE
MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLY NDHRLGQ+QVS TKSVVIAK SA+FSPSYP SNRH QCIKAVKEHVDTPSSPTAEPW+HNTTIWEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPWIHNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQL+P+ISPELLQNRL+GYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Query: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEE+L H+EVVRLSKKIKVGLALEE KTRLKERL CEPSE+QLAISL+ISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADSRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTKK
FPSLNGLPGETHHSYIAD+RLENNPWHGTDTW LK EVNKLIN+TL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK +K
Subjt: FPSLNGLPGETHHSYIADSRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTKK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| XP_016902935.1 PREDICTED: RNA polymerase sigma factor sigA [Cucumis melo] | 7.9e-269 | 95.68 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHS-QCIKAVKEHVDTPSSPTAEPWIHNTTIWED
MMAT AIIGLGAAKRLLNSSSYYSDFTEK+LYAND+RLGQ+QVSPTKSVVIAK SANFSPSYP SNRHS QCIKAVKEHV+TPSSPTAEPW+ NTTIWED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHS-QCIKAVKEHVDTPSSPTAEPWIHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PR KT KKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEELLSHAEVVRLSKKIKVGLALEE KTRLKERLGCEPSEDQLAISLKISRAELRSR+MECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADSRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTK
AFPSLNGLPGETHHSYIAD+ LENNPWHGTDTWILKAEVNKLIN+TLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKT+
Subjt: AFPSLNGLPGETHHSYIADSRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTK
Query: KMEAMLLKH
KMEAML+KH
Subjt: KMEAMLLKH
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| XP_023006851.1 RNA polymerase sigma factor sigA-like [Cucurbita maxima] | 4.8e-266 | 94.29 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPWIHNTTIWEDE
MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLY NDHRLGQ+QVS TK VVIAK SA+FSPSY SNRH QCIKAVKEHVDTPSSPTAEPW+HNTTIWEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPWIHNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQL+P ISPELLQNRL+GYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Query: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEE+L H+EVVRLSKKIKVGLALEE KTRLKERL C+PSE+QLAISL+ISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADSRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTKK
FPSLNGLPGETHHSYIAD+RLENNPWHGTDTWILK EVNKLIN+TL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK +K
Subjt: FPSLNGLPGETHHSYIADSRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTKK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| XP_023533104.1 RNA polymerase sigma factor sigA-like [Cucurbita pepo subsp. pepo] | 5.6e-267 | 94.49 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPWIHNTTIWEDE
MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLY NDHRLGQ+QVS TKSVVIAK SA+FSPSYP SNRH QCIKAVKEHVDTPSSPTAEPW+HNTTIWEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPWIHNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVF+AQPKISKQL+P+ISPELLQNRL+GYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Query: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEE+L H+EVVRLSKKIKVGLALEE KTRLKERL CEPSE+QLAISL+ISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADSRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTKK
FPSLNGLPGETHHSYIAD+RLENNPWHGTDTWILK EVNKLIN+TL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK +K
Subjt: FPSLNGLPGETHHSYIADSRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTKK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| XP_038902049.1 RNA polymerase sigma factor sigA [Benincasa hispida] | 4.3e-275 | 97.64 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYA-NDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPWIHNTTIWED
MMATAAIIGLGAAKRLLNSSSYYSDFTEK+LY NDHRLGQ+QVSPTKSVVIAK SANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPW+HNTTIWED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYA-NDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPWIHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EE DLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADSRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTK
AFPSLNGLPGETHHSYIAD+ LENNPWHGTDTWILKAEVNKLIN+TLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKT+
Subjt: AFPSLNGLPGETHHSYIADSRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTK
Query: KMEAMLLKH
KMEAMLLKH
Subjt: KMEAMLLKH
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S4E4N5 RNA polymerase sigma factor sigA | 3.8e-269 | 95.68 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHS-QCIKAVKEHVDTPSSPTAEPWIHNTTIWED
MMAT AIIGLGAAKRLLNSSSYYSDFTEK+LYAND+RLGQ+QVSPTKSVVIAK SANFSPSYP SNRHS QCIKAVKEHV+TPSSPTAEPW+ NTTIWED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHS-QCIKAVKEHVDTPSSPTAEPWIHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PR KT KKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEELLSHAEVVRLSKKIKVGLALEE KTRLKERLGCEPSEDQLAISLKISRAELRSR+MECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADSRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTK
AFPSLNGLPGETHHSYIAD+ LENNPWHGTDTWILKAEVNKLIN+TLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKT+
Subjt: AFPSLNGLPGETHHSYIADSRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTK
Query: KMEAMLLKH
KMEAML+KH
Subjt: KMEAMLLKH
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| A0A5D3BME8 RNA polymerase sigma factor sigA | 3.8e-269 | 95.68 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHS-QCIKAVKEHVDTPSSPTAEPWIHNTTIWED
MMAT AIIGLGAAKRLLNSSSYYSDFTEK+LYAND+RLGQ+QVSPTKSVVIAK SANFSPSYP SNRHS QCIKAVKEHV+TPSSPTAEPW+ NTTIWED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHS-QCIKAVKEHVDTPSSPTAEPWIHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PR KT KKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEELLSHAEVVRLSKKIKVGLALEE KTRLKERLGCEPSEDQLAISLKISRAELRSR+MECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADSRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTK
AFPSLNGLPGETHHSYIAD+ LENNPWHGTDTWILKAEVNKLIN+TLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKT+
Subjt: AFPSLNGLPGETHHSYIADSRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTK
Query: KMEAMLLKH
KMEAML+KH
Subjt: KMEAMLLKH
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| A0A6J1D604 RNA polymerase sigma factor sigA | 6.7e-266 | 94.29 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPWIHNTTIWEDE
MMATAAIIGLGAAKRLLNSSSYYSDF EK+LYANDHRLGQSQVSPTKSVVIAK SANFSPS+PSSNRH+QCIKAVKEHVDTPSSPT EPW+ N+T WEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPWIHNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
E DLKCTVEALLLLQKSMLEKQWNLSFEQTV TDA RG+T+KKVPVTCSGVSARQRRMSSKRKIQSK+ FM QPKISKQLR TISPELLQ RLKGYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Query: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISR ELRSRV+ECSLA+EKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADSRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTKK
FPSLNGLPGETHHSYIAD+ LEN+PWHGTDTWILKAEVNKLIN+TLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKT+K
Subjt: FPSLNGLPGETHHSYIADSRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTKK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| A0A6J1G739 RNA polymerase sigma factor sigA-like | 2.8e-264 | 93.7 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPWIHNTTIWEDE
MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLY NDHRLGQ+QVS TKSVVIAK SA+FSPSYP SNRH QCIKAVKEHVDTPSSPTAEPW++NTTIWEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPWIHNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PRGKTEKKVPVTCSGVSARQRRM+SKRKIQSKHVFMAQPKISKQ +P+ISPELLQNRL+GYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Query: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEE+L H+EVVRLSKKIKVGLALEE KTRLKERL CEPSE+QLAISL+IS AELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADSRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTKK
FPSLNGLPGETHHSYIAD+RLENNPWHGTDTW LK EVNKLIN+TL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK +K
Subjt: FPSLNGLPGETHHSYIADSRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTKK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| A0A6J1KWY7 RNA polymerase sigma factor sigA-like | 2.3e-266 | 94.29 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPWIHNTTIWEDE
MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLY NDHRLGQ+QVS TK VVIAK SA+FSPSY SNRH QCIKAVKEHVDTPSSPTAEPW+HNTTIWEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPWIHNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQL+P ISPELLQNRL+GYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Query: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEE+L H+EVVRLSKKIKVGLALEE KTRLKERL C+PSE+QLAISL+ISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADSRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTKK
FPSLNGLPGETHHSYIAD+RLENNPWHGTDTWILK EVNKLIN+TL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK +K
Subjt: FPSLNGLPGETHHSYIADSRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTKK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| SwissProt top hits | e value | %identity | Alignment |
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| O24629 RNA polymerase sigma factor sigA | 1.9e-193 | 69.96 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPWIHNTTIWE---
MATAA+IGL KRLL+SS Y+SD TEK L NDH Q ++ TKS + AK ++N+SPS+PSSNRH+Q KA+KE VD S T +PW+ N T E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPWIHNTTIWE---
Query: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKT--EKKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNR
D++ + +VEA+LLLQKSMLEK WNLSFE+ VS++ P T +KK+PV TCSG+SARQRR+ +K+K HV +S +
Subjt: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKT--EKKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNR
Query: LKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
++GYVKG++SE++LSH EVVRLSKKIK GL L++ K+RLK+RLGCEPS++QLA+SLKISRAEL++ +MEC LAREKLAMSNVRLVMSIAQRYDN+GAEM+
Subjt: LKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
Query: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISK
DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK+RLQEKGITPS+DRIAESLNMS+KKV+NATEA+SK
Subjt: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISK
Query: VFSLDREAFPSLNGLPGETHHSYIADSRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKL
VFSLDR+AFPSLNGLPGETHHSYIAD+RLENNPWHG D LK EV+KLI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRIGLSRERVRQVGLVALEKL
Subjt: VFSLDREAFPSLNGLPGETHHSYIADSRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKL
Query: KKAAKTKKMEAMLLKH
K AA+ +KMEAM+LK+
Subjt: KKAAKTKKMEAMLLKH
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| P26683 RNA polymerase sigma factor SigA | 1.9e-39 | 33.74 | Show/hide |
Query: KISKQLRPTISPE--LLQNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMS
K +K R T S + ++ ++ Y++ + LL E + L++KI L LE + RL E+L +P + + A ++++ R R+ A++K+ S
Subjt: KISKQLRPTISPE--LLQNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMS
Query: NVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVRLQEKGITPSLDR
N+RLV+SIA++Y N G DL+Q G +GL+R EKFD KG+K STY WWIRQ ++RA+ + SRT+RLP HL+E + I + K+ QE G P+ +
Subjt: NVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVRLQEKGITPSLDR
Query: IAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADSRLENN---PWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDN-ECLTW
IA + M+ +K++ ++ SL+ G+ S + D +E++ P +L+ ++ K+++ +L RER+++RL +GLD+ T
Subjt: IAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADSRLENN---PWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDN-ECLTW
Query: EEISKRIGLSRERVRQVGLVALEKLK
EEI + ++RER+RQ+ AL KL+
Subjt: EEISKRIGLSRERVRQVGLVALEKLK
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| P38023 RNA polymerase sigma factor SigA1 | 3.2e-39 | 34.14 | Show/hide |
Query: AQPKISKQLRPTISPELLQNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAM
A K ++R T + ++ ++ Y++ + LL E + L+++I LALE + L E+L PS+ + A ++ E R R+ A++K+
Subjt: AQPKISKQLRPTISPELLQNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAM
Query: SNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVRLQEKGITPSLD
SN+RLV+SIA++Y N G DL+Q G +GL+R EKFD KG+K STY WWIRQ ++RA+ + SRT+RLP HL+E + I + K+ QE G P+ +
Subjt: SNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVRLQEKGITPSLD
Query: RIAESLNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADSRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDN-
IA + M+ +K+ K+A IS + +E L GET +A + +L+ ++ +++ TL RER+++RL +GLD+
Subjt: RIAESLNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADSRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDN-
Query: ECLTWEEISKRIGLSRERVRQVGLVALEKLK
T EEI + ++RER+RQ+ AL KL+
Subjt: ECLTWEEISKRIGLSRERVRQVGLVALEKLK
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| Q03065 RNA polymerase sigma-B factor | 1.6e-38 | 33.11 | Show/hide |
Query: LLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLR
LLSH + + +++++ + + K L E+L EP+ + A +++ L ++ + +A++K+ +N+RLV+SIA++Y E DL+Q G +GL R
Subjt: LLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLR
Query: GIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEK-GITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPS
G+EKFD + G+K STY YWWIRQG++RA+ + SRT+RLP H+ ++L I+ + L +K G + IA++LN+ +++ + + + SLD
Subjt: GIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEK-GITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPS
Query: LNGLPGETH-HSYIADSRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLKK
G +T + D + +P + +L +++ L+ L +++E++ L GL C LT +IS+R+G+SRERVRQV AL L++
Subjt: LNGLPGETH-HSYIADSRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLKK
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| Q0J7T6 RNA polymerase sigma factor sigA | 1.4e-130 | 51.41 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYP---------------SSNRHSQCIKAVKEHVD-----
M AT A+IGL A RLL++S F L + LG + +F+P P S + +Q ++A++ H
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYP---------------SSNRHSQCIKAVKEHVD-----
Query: TPSSPTAEPWIHNTTIWEDEETDLKCTVEALLLLQKSMLEKQWNLSFE-----QTVSTDAPRGKTEK-KVPVTCSGVSARQRRMSSKRKIQSKHVFMAQP
P P P + DL+ ++EA++LLQ+SMLEKQW L F+ + T K V V S VSARQRRMS +R+ ++K
Subjt: TPSSPTAEPWIHNTTIWEDEETDLKCTVEALLLLQKSMLEKQWNLSFE-----QTVSTDAPRGKTEK-KVPVTCSGVSARQRRMSSKRKIQSKHVFMAQP
Query: KISKQLRPTISPELLQNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNV
+ +SPEL+Q+R + Y++G VS+ELL+H +VV LS KIK G+ L++++++LKE+LG EPS QLA SLKIS ELRSR+ E LARE L MSN+
Subjt: KISKQLRPTISPELLQNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNV
Query: RLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAE
RLV+SIAQ+YDN+G E+ADL+QGGLIGLLRGIEKFD+S+GF+ISTYVYWWIRQGVSRAL ENS+T RLPT+LHERL IR AK L+++GI P+++ IA
Subjt: RLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAE
Query: SLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADSRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRI
SLN+S+KKV NATEA++KV SLD++AFPSLNGLPGET HSYI D + N+PWHG + W LK EVNKL+N TL +RER+IIRLYHG+ +C TWE+IS++
Subjt: SLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADSRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRI
Query: GLSRERVRQVGLVALEKLKKAAKTKKMEAML
GLSRERVRQVGL+A+EKLK AA+ K +EA+L
Subjt: GLSRERVRQVGLVALEKLKKAAKTKKMEAML
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G08540.1 RNApolymerase sigma subunit 2 | 1.9e-39 | 32.71 | Show/hide |
Query: EKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKI----SKQLRPTISPELLQNRLKGYVKGLV-SEELLSHAEVVRLSKKIKVGLALEERKTRLKERL
E++ V+ + S RQ ++R + P + S + + ++ E+ N Y++ S +LL+ E LS I+ L LE +T L ER
Subjt: EKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKI----SKQLRPTISPELLQNRLKGYVKGLV-SEELLSHAEVVRLSKKIKVGLALEERKTRLKERL
Query: GCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVE
G +P+ Q A + + + LR R+ +L ++K+ SN+RLV+SIA+ Y G + DLVQ G GL+RG EKFD++KGFK STY +WWI+Q V ++L +
Subjt: GCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVE
Query: NSRTLRLPTHLHERLGLIRNAKVRL-QEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADSRLENNPWHGTDTWI-
SR +RLP H+ E ++ A+ +L E G P + IAE+ +S K++ + SLD++ + N P E IAD + D I
Subjt: NSRTLRLPTHLHERLGLIRNAKVRL-QEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADSRLENNPWHGTDTWI-
Query: --LKAEVNKLINLTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTKKMEAMLL
++ +++K+++ +LG RE+++IR G+ D T +EI + +G+SRERVRQ+ A KLK + ++ L+
Subjt: --LKAEVNKLINLTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTKKMEAMLL
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| AT1G64860.1 sigma factor A | 1.4e-194 | 69.96 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPWIHNTTIWE---
MATAA+IGL KRLL+SS Y+SD TEK L NDH Q ++ TKS + AK ++N+SPS+PSSNRH+Q KA+KE VD S T +PW+ N T E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPWIHNTTIWE---
Query: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKT--EKKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNR
D++ + +VEA+LLLQKSMLEK WNLSFE+ VS++ P T +KK+PV TCSG+SARQRR+ +K+K HV +S +
Subjt: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKT--EKKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNR
Query: LKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
++GYVKG++SE++LSH EVVRLSKKIK GL L++ K+RLK+RLGCEPS++QLA+SLKISRAEL++ +MEC LAREKLAMSNVRLVMSIAQRYDN+GAEM+
Subjt: LKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
Query: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISK
DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK+RLQEKGITPS+DRIAESLNMS+KKV+NATEA+SK
Subjt: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISK
Query: VFSLDREAFPSLNGLPGETHHSYIADSRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKL
VFSLDR+AFPSLNGLPGETHHSYIAD+RLENNPWHG D LK EV+KLI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRIGLSRERVRQVGLVALEKL
Subjt: VFSLDREAFPSLNGLPGETHHSYIADSRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKL
Query: KKAAKTKKMEAMLLKH
K AA+ +KMEAM+LK+
Subjt: KKAAKTKKMEAMLLKH
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| AT1G64860.2 sigma factor A | 1.9e-180 | 69.09 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPWIHNTTIWE---
MATAA+IGL KRLL+SS Y+SD TEK L NDH Q ++ TKS + AK ++N+SPS+PSSNRH+Q KA+KE VD S T +PW+ N T E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPWIHNTTIWE---
Query: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKT--EKKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNR
D++ + +VEA+LLLQKSMLEK WNLSFE+ VS++ P T +KK+PV TCSG+SARQRR+ +K+K HV +S +
Subjt: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKT--EKKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNR
Query: LKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
++GYVKG++SE++LSH EVVRLSKKIK GL L++ K+RLK+RLGCEPS++QLA+SLKISRAEL++ +MEC LAREKLAMSNVRLVMSIAQRYDN+GAEM+
Subjt: LKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
Query: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISK
DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK+RLQEKGITPS+DRIAESLNMS+KKV+NATEA+SK
Subjt: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISK
Query: VFSLDREAFPSLNGLPGETHHSYIADSRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRI
VFSLDR+AFPSLNGLPGETHHSYIAD+RLENNPWHG D LK EV+KLI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRI
Subjt: VFSLDREAFPSLNGLPGETHHSYIADSRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRI
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| AT2G36990.1 RNApolymerase sigma-subunit F | 6.9e-37 | 32.91 | Show/hide |
Query: LKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
L+ ++ G +++LL+ E L I+ L LE+ KT+L+ + GCEP+ + A ++ IS L+S + +REKL +N+RLV+ IA++Y N G
Subjt: LKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
Query: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA-KVRLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
DL+Q G +GL++ +EKF G + +TY YWWIRQ + +++ +NSRT+RLP +++ LG + A K +QE PS + +A + +S +K+
Subjt: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA-KVRLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
Query: KVFSLDREAFPSLNGLPGETHHSYIADSRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLD-NECLTWEEISKRIGLSRERVRQVGLVALE
S+ + + + T DS +E P +++ V L+N+ L +ER II+L G+D + + EI + GLS+ERVRQ+ AL
Subjt: KVFSLDREAFPSLNGLPGETHHSYIADSRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLD-NECLTWEEISKRIGLSRERVRQVGLVALE
Query: KLKKAAKTKKMEA
+LK+ + + A
Subjt: KLKKAAKTKKMEA
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| AT5G13730.1 sigma factor 4 | 4.2e-34 | 32.84 | Show/hide |
Query: SSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSR
S KR+ + + + ++ + E + V G LS E V+L +K G LE T ++E + +++ L R + +
Subjt: SSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAELRSR
Query: VMEC----SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIR
E AREK+ RLV+SIA Y G + DL+Q G IGLLRG E+FD +G+K+STYVYWWI+Q + RA+ SR ++LP + E +
Subjt: VMEC----SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIR
Query: NAKVRLQEK-GITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADSRLENNPWHGTDTWILKAEVNKLINLTLGDREREI
A L K PS + IAE LN++ V+ A E SLDR A + G I E P +K E+ +L+ +L RE +
Subjt: NAKVRLQEK-GITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADSRLENNPWHGTDTWILKAEVNKLINLTLGDREREI
Query: IRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLK
+ LY GL+ E +++EEI K + LSRERVRQ+ +AL+KL+
Subjt: IRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLK
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