; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0008878 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008878
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGrowth-regulating factor
Genome locationchr9:31573504..31574184
RNA-Seq ExpressionLag0008878
SyntenyLag0008878
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0099402 - plant organ development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR031137 - Growth-regulating factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066299.1 growth-regulating factor 4-like [Cucumis melo var. makuwa]1.9e-6696.35Show/hide
Query:  RYLQGLRPEAGVHSFFSEASGSSRAVQMDAPMDNTWPMMPSRSPSFPTSKSTENSIFQSGYPQHSFFGGEFASGETLKQEGQSLQPFFDEWPRTRESWTG
        RYLQGLRPEAGVHSFFSEASGSSRAVQMDAP+DNTWPMM SRSPSFPTSKSTENSIFQSGY QHSFFGGE+ASGETLKQEGQSLQP FDEWPRTRESWTG
Subjt:  RYLQGLRPEAGVHSFFSEASGSSRAVQMDAPMDNTWPMMPSRSPSFPTSKSTENSIFQSGYPQHSFFGGEFASGETLKQEGQSLQPFFDEWPRTRESWTG

Query:  LDDERSNQTSFSTTQLSISIPMASSDLSTTSSKSPHG
        LDDERSNQTSFSTTQLSISIPMASSDLSTTSSKSPHG
Subjt:  LDDERSNQTSFSTTQLSISIPMASSDLSTTSSKSPHG

KAG7035154.1 Growth-regulating factor 4, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-6594.93Show/hide
Query:  RYLQGLRPEAGVHSFFSEASGSSRAVQMDAPMD-NTWPMMPSRSPSFPTSKSTENSIFQSGYPQHSFFGGEFASGETLKQEGQSLQPFFDEWPRTRESWT
        RY+QGLRPEAGVHSFFSEASGSSRAVQMDAPMD NTWPMMPSRS SFP SKSTENSIFQSGYPQHSFFGGEFASG+TLKQEGQSLQPFFDEWP+TRESWT
Subjt:  RYLQGLRPEAGVHSFFSEASGSSRAVQMDAPMD-NTWPMMPSRSPSFPTSKSTENSIFQSGYPQHSFFGGEFASGETLKQEGQSLQPFFDEWPRTRESWT

Query:  GLDDERSNQTSFSTTQLSISIPMASSDLSTTSSKSPHG
        GLDDERSNQTS+STTQLSISIPMASSDLSTTSSKSPHG
Subjt:  GLDDERSNQTSFSTTQLSISIPMASSDLSTTSSKSPHG

TYK00977.1 growth-regulating factor 4-like [Cucumis melo var. makuwa]1.9e-6696.35Show/hide
Query:  RYLQGLRPEAGVHSFFSEASGSSRAVQMDAPMDNTWPMMPSRSPSFPTSKSTENSIFQSGYPQHSFFGGEFASGETLKQEGQSLQPFFDEWPRTRESWTG
        RYLQGLRPEAGVHSFFSEASGSSRAVQMDAP+DNTWPMM SRSPSFPTSKSTENSIFQSGY QHSFFGGE+ASGETLKQEGQSLQP FDEWPRTRESWTG
Subjt:  RYLQGLRPEAGVHSFFSEASGSSRAVQMDAPMDNTWPMMPSRSPSFPTSKSTENSIFQSGYPQHSFFGGEFASGETLKQEGQSLQPFFDEWPRTRESWTG

Query:  LDDERSNQTSFSTTQLSISIPMASSDLSTTSSKSPHG
        LDDERSNQTSFSTTQLSISIPMASSDLSTTSSKSPHG
Subjt:  LDDERSNQTSFSTTQLSISIPMASSDLSTTSSKSPHG

XP_008462790.1 PREDICTED: growth-regulating factor 4-like [Cucumis melo]9.5e-6696.32Show/hide
Query:  RYLQGLRPEAGVHSFFSEASGSSRAVQMDAPMDNTWPMMPSRSPSFPTSKSTENSIFQSGYPQHSFFGGEFASGETLKQEGQSLQPFFDEWPRTRESWTG
        RYLQGLRPEAGVHSFFSEASGSSRAVQMDAP+DNTWPMM SRSPSFPTSKSTENSIFQSGY QHSFFGGE+ASGETLKQEGQSLQP FDEWPRTRESWTG
Subjt:  RYLQGLRPEAGVHSFFSEASGSSRAVQMDAPMDNTWPMMPSRSPSFPTSKSTENSIFQSGYPQHSFFGGEFASGETLKQEGQSLQPFFDEWPRTRESWTG

Query:  LDDERSNQTSFSTTQLSISIPMASSDLSTTSSKSPH
        LDDERSNQTSFSTTQLSISIPMASSDLSTTSSKSPH
Subjt:  LDDERSNQTSFSTTQLSISIPMASSDLSTTSSKSPH

XP_022148584.1 growth-regulating factor 4-like [Momordica charantia]2.5e-6695.59Show/hide
Query:  RYLQGLRPEAGVHSFFSEASGSSRAVQMDAPMDNTWPMMPSRSPSFPTSKSTENSIFQSGYPQHSFFGGEFASGETLKQEGQSLQPFFDEWPRTRESWTG
        RYLQGLRPEAGVHSFFSEASGSSRAVQMD PMDNTWPMMPSRSPSFP SKS++NSIFQSGYPQHSFFGGEFASGETLKQEGQSLQPFFDEWPR RESWTG
Subjt:  RYLQGLRPEAGVHSFFSEASGSSRAVQMDAPMDNTWPMMPSRSPSFPTSKSTENSIFQSGYPQHSFFGGEFASGETLKQEGQSLQPFFDEWPRTRESWTG

Query:  LDDERSNQTSFSTTQLSISIPMASSDLSTTSSKSPH
        LDDERSNQTSFSTTQLSISIPMASSD+STTSSKSPH
Subjt:  LDDERSNQTSFSTTQLSISIPMASSDLSTTSSKSPH

TrEMBL top hitse value%identityAlignment
A0A0A0LN73 Growth-regulating factor1.8e-6595.59Show/hide
Query:  RYLQGLRPEAGVHSFFSEASGSSRAVQMDAPMDNTWPMMPSRSPSFPTSKSTENSIFQSGYPQHSFFGGEFASGETLKQEGQSLQPFFDEWPRTRESWTG
        RYLQGLRPEAGVHSFFSEASGSSRAVQMDAP+DNTWPMM SRSPSFP SKSTENSIFQSGY QHSFFGGE+ASGETLKQEGQSLQP FDEWPRTRESWTG
Subjt:  RYLQGLRPEAGVHSFFSEASGSSRAVQMDAPMDNTWPMMPSRSPSFPTSKSTENSIFQSGYPQHSFFGGEFASGETLKQEGQSLQPFFDEWPRTRESWTG

Query:  LDDERSNQTSFSTTQLSISIPMASSDLSTTSSKSPH
        LDDERSNQTSFSTTQLSISIPMASSDLSTTSSKSPH
Subjt:  LDDERSNQTSFSTTQLSISIPMASSDLSTTSSKSPH

A0A1S3CHP3 Growth-regulating factor4.6e-6696.32Show/hide
Query:  RYLQGLRPEAGVHSFFSEASGSSRAVQMDAPMDNTWPMMPSRSPSFPTSKSTENSIFQSGYPQHSFFGGEFASGETLKQEGQSLQPFFDEWPRTRESWTG
        RYLQGLRPEAGVHSFFSEASGSSRAVQMDAP+DNTWPMM SRSPSFPTSKSTENSIFQSGY QHSFFGGE+ASGETLKQEGQSLQP FDEWPRTRESWTG
Subjt:  RYLQGLRPEAGVHSFFSEASGSSRAVQMDAPMDNTWPMMPSRSPSFPTSKSTENSIFQSGYPQHSFFGGEFASGETLKQEGQSLQPFFDEWPRTRESWTG

Query:  LDDERSNQTSFSTTQLSISIPMASSDLSTTSSKSPH
        LDDERSNQTSFSTTQLSISIPMASSDLSTTSSKSPH
Subjt:  LDDERSNQTSFSTTQLSISIPMASSDLSTTSSKSPH

A0A5A7VLW4 Growth-regulating factor9.3e-6796.35Show/hide
Query:  RYLQGLRPEAGVHSFFSEASGSSRAVQMDAPMDNTWPMMPSRSPSFPTSKSTENSIFQSGYPQHSFFGGEFASGETLKQEGQSLQPFFDEWPRTRESWTG
        RYLQGLRPEAGVHSFFSEASGSSRAVQMDAP+DNTWPMM SRSPSFPTSKSTENSIFQSGY QHSFFGGE+ASGETLKQEGQSLQP FDEWPRTRESWTG
Subjt:  RYLQGLRPEAGVHSFFSEASGSSRAVQMDAPMDNTWPMMPSRSPSFPTSKSTENSIFQSGYPQHSFFGGEFASGETLKQEGQSLQPFFDEWPRTRESWTG

Query:  LDDERSNQTSFSTTQLSISIPMASSDLSTTSSKSPHG
        LDDERSNQTSFSTTQLSISIPMASSDLSTTSSKSPHG
Subjt:  LDDERSNQTSFSTTQLSISIPMASSDLSTTSSKSPHG

A0A5D3BNV9 Growth-regulating factor9.3e-6796.35Show/hide
Query:  RYLQGLRPEAGVHSFFSEASGSSRAVQMDAPMDNTWPMMPSRSPSFPTSKSTENSIFQSGYPQHSFFGGEFASGETLKQEGQSLQPFFDEWPRTRESWTG
        RYLQGLRPEAGVHSFFSEASGSSRAVQMDAP+DNTWPMM SRSPSFPTSKSTENSIFQSGY QHSFFGGE+ASGETLKQEGQSLQP FDEWPRTRESWTG
Subjt:  RYLQGLRPEAGVHSFFSEASGSSRAVQMDAPMDNTWPMMPSRSPSFPTSKSTENSIFQSGYPQHSFFGGEFASGETLKQEGQSLQPFFDEWPRTRESWTG

Query:  LDDERSNQTSFSTTQLSISIPMASSDLSTTSSKSPHG
        LDDERSNQTSFSTTQLSISIPMASSDLSTTSSKSPHG
Subjt:  LDDERSNQTSFSTTQLSISIPMASSDLSTTSSKSPHG

A0A6J1D4F3 Growth-regulating factor1.2e-6695.59Show/hide
Query:  RYLQGLRPEAGVHSFFSEASGSSRAVQMDAPMDNTWPMMPSRSPSFPTSKSTENSIFQSGYPQHSFFGGEFASGETLKQEGQSLQPFFDEWPRTRESWTG
        RYLQGLRPEAGVHSFFSEASGSSRAVQMD PMDNTWPMMPSRSPSFP SKS++NSIFQSGYPQHSFFGGEFASGETLKQEGQSLQPFFDEWPR RESWTG
Subjt:  RYLQGLRPEAGVHSFFSEASGSSRAVQMDAPMDNTWPMMPSRSPSFPTSKSTENSIFQSGYPQHSFFGGEFASGETLKQEGQSLQPFFDEWPRTRESWTG

Query:  LDDERSNQTSFSTTQLSISIPMASSDLSTTSSKSPH
        LDDERSNQTSFSTTQLSISIPMASSD+STTSSKSPH
Subjt:  LDDERSNQTSFSTTQLSISIPMASSDLSTTSSKSPH

SwissProt top hitse value%identityAlignment
A0A060D764 Growth-regulating factor 13.3e-1340.46Show/hide
Query:  AVQMDAPMDNTWPMMPSRSP--SFP---------TSKSTENSI--FQSGYPQHSFFGGEFASGETL-----KQEGQSLQPFFDEWPRTRESWTGLDDERS
        A  +D+ +++ W +  S  P  S+P            ST +S+   +   P  SF G +  +G  +     KQEGQ+L+ FFDEWP+ R+SW GL DE +
Subjt:  AVQMDAPMDNTWPMMPSRSP--SFP---------TSKSTENSI--FQSGYPQHSFFGGEFASGETL-----KQEGQSLQPFFDEWPRTRESWTGLDDERS

Query:  NQTSF-STTQLSISIPMASSDLSTTSSKSPH
        +  SF   TQLS+SIPMASSD S  SS+SP+
Subjt:  NQTSF-STTQLSISIPMASSDLSTTSSKSPH

Q6AWY4 Growth-regulating factor 54.7e-2340.94Show/hide
Query:  RYLQGLRPEAGVHSFFSEASGSSRAVQMDAPMDNTWPMMPSRSPSFPTSKSTENSIFQSGY-----------------------PQHSFFGGEFASGETL
        +Y  G + + G  SFFS ASG++R   +D+P D++W  +PS  P +P SK  ++ +    Y                        + SF GG       +
Subjt:  RYLQGLRPEAGVHSFFSEASGSSRAVQMDAPMDNTWPMMPSRSPSFPTSKSTENSIFQSGY-----------------------PQHSFFGGEFASGETL

Query:  KQEGQSLQPFFDEWPRTRESWTGLDDERSNQTSFSTTQLSISIPMASSD
        K E Q L+PFFDEWP  R+SW+ +D+ERSNQTSFSTTQLSISIPM   D
Subjt:  KQEGQSLQPFFDEWPRTRESWTGLDDERSNQTSFSTTQLSISIPMASSD

Q6AWY6 Growth-regulating factor 31.2e-1842.07Show/hide
Query:  GLRPEAGVHSFFSEASGSSRAVQMDAPMDNTWPMMPSRSPSFPTS------------KSTENSIFQSGYPQHSFFGGEFASGETLKQEGQSLQPFFDEWP
        G+RP A  HS     +       MD  +DN+W ++PS++ +F  S            ++T  S+ +      SFFG ++ + ++ KQE Q+L+PFFDEWP
Subjt:  GLRPEAGVHSFFSEASGSSRAVQMDAPMDNTWPMMPSRSPSFPTS------------KSTENSIFQSGYPQHSFFGGEFASGETLKQEGQSLQPFFDEWP

Query:  RTRESWTGLDDERSNQTSFSTTQLSISIPMASSDLSTTSSKSPHG
        + R+SW  L D+ S  T FS TQLSISIPMA+SD STTSS+S +G
Subjt:  RTRESWTGLDDERSNQTSFSTTQLSISIPMASSDLSTTSSKSPHG

Q6ZIK5 Growth-regulating factor 43.7e-2044.26Show/hide
Query:  MDAPMDNTWPMMPSRSPSFPTS------------KSTENSIFQSGYPQHSFFGGEFASGETLKQEGQSLQPFFDEWPRTRESWTGLDDERSNQTSFSTTQ
        ++  ++N W ++PS++  FP S            ++T +S+ +      SFFG ++A+ +++KQE Q+L+PFFDEWP+ R+SW+ L DE +N +SFS TQ
Subjt:  MDAPMDNTWPMMPSRSPSFPTS------------KSTENSIFQSGYPQHSFFGGEFASGETLKQEGQSLQPFFDEWPRTRESWTGLDDERSNQTSFSTTQ

Query:  LSISIPMASSDLSTTSSKSPHG
        LSISIPMASSD S  SS+S +G
Subjt:  LSISIPMASSDLSTTSSKSPHG

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCATCCCTTCCTTATAGCATTATGCCTAAGGTATCTTCAAGGGCTTAGACCTGAGGCTGGAGTGCATAGTTTCTTTTCTGAGGCATCAGGAAGCAGCAGGGCTGT
TCAAATGGATGCACCAATGGACAACACATGGCCAATGATGCCATCTAGATCCCCGTCATTCCCGACATCAAAATCGACTGAAAACTCTATCTTCCAAAGCGGATATCCGC
AGCATTCGTTTTTTGGTGGTGAATTTGCGTCCGGGGAAACTTTGAAACAAGAAGGTCAATCTCTTCAGCCGTTCTTTGACGAATGGCCGAGAACTAGGGAGTCATGGACC
GGACTCGATGATGAAAGATCCAACCAAACTTCCTTCTCCACAACACAGCTCTCCATATCAATTCCAATGGCTTCATCTGACTTATCGACCACAAGTTCGAAATCCCCTCA
TGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTCATCCCTTCCTTATAGCATTATGCCTAAGGTATCTTCAAGGGCTTAGACCTGAGGCTGGAGTGCATAGTTTCTTTTCTGAGGCATCAGGAAGCAGCAGGGCTGT
TCAAATGGATGCACCAATGGACAACACATGGCCAATGATGCCATCTAGATCCCCGTCATTCCCGACATCAAAATCGACTGAAAACTCTATCTTCCAAAGCGGATATCCGC
AGCATTCGTTTTTTGGTGGTGAATTTGCGTCCGGGGAAACTTTGAAACAAGAAGGTCAATCTCTTCAGCCGTTCTTTGACGAATGGCCGAGAACTAGGGAGTCATGGACC
GGACTCGATGATGAAAGATCCAACCAAACTTCCTTCTCCACAACACAGCTCTCCATATCAATTCCAATGGCTTCATCTGACTTATCGACCACAAGTTCGAAATCCCCTCA
TGGTTAG
Protein sequenceShow/hide protein sequence
MPHPFLIALCLRYLQGLRPEAGVHSFFSEASGSSRAVQMDAPMDNTWPMMPSRSPSFPTSKSTENSIFQSGYPQHSFFGGEFASGETLKQEGQSLQPFFDEWPRTRESWT
GLDDERSNQTSFSTTQLSISIPMASSDLSTTSSKSPHG