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Lag0008882 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008882
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr9:31675296..31683711
RNA-Seq ExpressionLag0008882
SyntenyLag0008882
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6734747.1 hypothetical protein I3842_01G285500 [Carya illinoinensis]8.1e-3466.67Show/hide
Query:  DKARDWLRSLPSGSITTWDALVQAFLAKYFPPAKTVKLRTEIGTFQQLGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIVDAAAGG
        DKAR WL+SL  GSI +W  + + FLAK+FPPAKT +LR+EIG F+Q   E L+EAWERYK+L+R+CPQHG PDWLQ+Q+FYNGLN  T+TIVDAA+GG
Subjt:  DKARDWLRSLPSGSITTWDALVQAFLAKYFPPAKTVKLRTEIGTFQQLGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIVDAAAGG

KAG7947748.1 hypothetical protein I3843_14G109500 [Carya illinoinensis]8.1e-3466.67Show/hide
Query:  DKARDWLRSLPSGSITTWDALVQAFLAKYFPPAKTVKLRTEIGTFQQLGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIVDAAAGG
        DKAR WL+SL  GSI +W  + + FLAK+FPPAKT +LR+EIG F+Q   E L+EAWERYK+L+R+CPQHG PDWLQ+Q+FYNGLN  T+TIVDAA+GG
Subjt:  DKARDWLRSLPSGSITTWDALVQAFLAKYFPPAKTVKLRTEIGTFQQLGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIVDAAAGG

WP_217833153.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]8.4e-3974.75Show/hide
Query:  DKARDWLRSLPSGSITTWDALVQAFLAKYFPPAKTVKLRTEIGTFQQLGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIVDAAAGG
        D+A+DWL ++P  SITTW+ L QAFL KYFPPAK+ +LRTEIGTF+QL DEQL+EAWERYK+LLR+CPQHGYPDWLQIQLFYNGL  +TK+I+DA AGG
Subjt:  DKARDWLRSLPSGSITTWDALVQAFLAKYFPPAKTVKLRTEIGTFQQLGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIVDAAAGG

XP_015387963.1 uncharacterized protein LOC107177920 [Citrus sinensis]1.1e-3570.71Show/hide
Query:  DKARDWLRSLPSGSITTWDALVQAFLAKYFPPAKTVKLRTEIGTFQQLGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIVDAAAGG
        DKA++WL SL +G+ITTWD L Q FLAKYFPPAKT KLR +I TF Q G E L+EAWERYK+LLRKCP HG P WLQ+Q FYNGL  NT+T++DAAAGG
Subjt:  DKARDWLRSLPSGSITTWDALVQAFLAKYFPPAKTVKLRTEIGTFQQLGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIVDAAAGG

XP_021279280.1 LOW QUALITY PROTEIN: uncharacterized protein LOC110412945 [Herrania umbratica]8.1e-3467.68Show/hide
Query:  DKARDWLRSLPSGSITTWDALVQAFLAKYFPPAKTVKLRTEIGTFQQLGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIVDAAAGG
        DKA+ WL SLP+GSITTW+ L Q FLAK+FPPAKT K+R +I +F Q   E L+EAWER+KELLR+CP HG PDWLQ+Q FYNGL  + KTI+DAAAGG
Subjt:  DKARDWLRSLPSGSITTWDALVQAFLAKYFPPAKTVKLRTEIGTFQQLGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIVDAAAGG

TrEMBL top hitse value%identityAlignment
A0A2I4F4C8 uncharacterized protein LOC1089953731.3e-3266.67Show/hide
Query:  DKARDWLRSLPSGSITTWDALVQAFLAKYFPPAKTVKLRTEIGTFQQLGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIVDAAAGG
        DKAR WL+SL  GSIT+W  + + FLAK+FPPAKT +LR+EI  F+Q   E L+EAWERYK L+R CPQHG P+WLQ+Q+FYNGLN  T+TIVDAAAGG
Subjt:  DKARDWLRSLPSGSITTWDALVQAFLAKYFPPAKTVKLRTEIGTFQQLGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIVDAAAGG

A0A438CWN7 Retrotrans_gag domain-containing protein6.3e-3264.65Show/hide
Query:  DKARDWLRSLPSGSITTWDALVQAFLAKYFPPAKTVKLRTEIGTFQQLGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIVDAAAGG
        +KA+ WL SLP G+ITTWD LV AFLAKYFP AK+ K+R +I  F Q   E L+EAWER+K+LLRKCP HG P W+Q Q+FYN L+PNT+T+VDAA+GG
Subjt:  DKARDWLRSLPSGSITTWDALVQAFLAKYFPPAKTVKLRTEIGTFQQLGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIVDAAAGG

A0A6J0ZX64 LOW QUALITY PROTEIN: uncharacterized protein LOC1104129453.9e-3467.68Show/hide
Query:  DKARDWLRSLPSGSITTWDALVQAFLAKYFPPAKTVKLRTEIGTFQQLGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIVDAAAGG
        DKA+ WL SLP+GSITTW+ L Q FLAK+FPPAKT K+R +I +F Q   E L+EAWER+KELLR+CP HG PDWLQ+Q FYNGL  + KTI+DAAAGG
Subjt:  DKARDWLRSLPSGSITTWDALVQAFLAKYFPPAKTVKLRTEIGTFQQLGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIVDAAAGG

A0A6J0ZYV0 uncharacterized protein LOC1104134133.9e-3467.68Show/hide
Query:  DKARDWLRSLPSGSITTWDALVQAFLAKYFPPAKTVKLRTEIGTFQQLGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIVDAAAGG
        DKA+ WL SLP+GSITTW+ L Q FLAK+FPPAKT K+R +I +F Q   E L+EAWER+KELLR+CP HG PDWLQ+Q FYNGL  + KTI+DAAAGG
Subjt:  DKARDWLRSLPSGSITTWDALVQAFLAKYFPPAKTVKLRTEIGTFQQLGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIVDAAAGG

A5AZ88 Integrase catalytic domain-containing protein6.3e-3264.65Show/hide
Query:  DKARDWLRSLPSGSITTWDALVQAFLAKYFPPAKTVKLRTEIGTFQQLGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIVDAAAGG
        +KA+ WL SLP G+ITTWD LV AFLAKYFP AK+ K+R +I  F Q   E L+EAWER+K+LLRKCP HG P W+Q Q+FYN L+PNT+T+VDAA+GG
Subjt:  DKARDWLRSLPSGSITTWDALVQAFLAKYFPPAKTVKLRTEIGTFQQLGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIVDAAAGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGTCCCCTCCCCTCCGACGAATAGCTTCGACGACGGCGCAGCAGCAGCGGCGGTTCATCGGCGTCGAGCACTTCTTCGTGCGGTCAACGACGATTTCTGCGTGGC
GATTCAAGCAGTGGGTCTTCGACTTTCAATGTCTTTGAGAAATTTCGGCATTGGGTTATGTAATCTTTGCTCTAGAGAAAATATGTTCCAGTTAAGTGGAGCTAAATTGT
CCGAGGGTGTATTTGTTGGTTCATTTCTATCAATGTCATCGACAATAGTGGATTCTAATTTGCTTATTCATTTATTAGGTGGTGAAGTTCATGGTGGAGAGCAGGATCCA
TCACCTGGCCCGGTATTACAAGAAGACAAAGAAGCTTCCCCTATTTGGAAGTACTTTGAGACGTTGTCCTTAGCGTCTCAACGTTGCAACAGTGCAACCACAAGCCCAGA
AGAGGAAGCGTCGAGATTCTACCTCCTTAATGTCTCGACGCTTCGGATTTGCACTCCGTCAGTTGAGGCGTGCATATGGGACAAGGCTAGAGACTGGCTCAGATCACTTC
CATCTGGAAGCATCACTACGTGGGACGCGTTGGTTCAGGCTTTTCTTGCCAAATATTTCCCACCTGCTAAGACAGTCAAGCTGAGAACGGAGATTGGGACATTCCAACAG
CTAGGAGATGAACAGTTATTTGAGGCTTGGGAGCGCTATAAGGAGTTACTGAGGAAATGCCCTCAGCATGGATACCCAGATTGGCTGCAGATCCAGTTGTTTTATAATGG
TCTAAATCCAAATACTAAAACCATTGTTGATGCAGCTGCAGGGGGACTCTGTTGTCCAAGACCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGTGTCCCCTCCCCTCCGACGAATAGCTTCGACGACGGCGCAGCAGCAGCGGCGGTTCATCGGCGTCGAGCACTTCTTCGTGCGGTCAACGACGATTTCTGCGTGGC
GATTCAAGCAGTGGGTCTTCGACTTTCAATGTCTTTGAGAAATTTCGGCATTGGGTTATGTAATCTTTGCTCTAGAGAAAATATGTTCCAGTTAAGTGGAGCTAAATTGT
CCGAGGGTGTATTTGTTGGTTCATTTCTATCAATGTCATCGACAATAGTGGATTCTAATTTGCTTATTCATTTATTAGGTGGTGAAGTTCATGGTGGAGAGCAGGATCCA
TCACCTGGCCCGGTATTACAAGAAGACAAAGAAGCTTCCCCTATTTGGAAGTACTTTGAGACGTTGTCCTTAGCGTCTCAACGTTGCAACAGTGCAACCACAAGCCCAGA
AGAGGAAGCGTCGAGATTCTACCTCCTTAATGTCTCGACGCTTCGGATTTGCACTCCGTCAGTTGAGGCGTGCATATGGGACAAGGCTAGAGACTGGCTCAGATCACTTC
CATCTGGAAGCATCACTACGTGGGACGCGTTGGTTCAGGCTTTTCTTGCCAAATATTTCCCACCTGCTAAGACAGTCAAGCTGAGAACGGAGATTGGGACATTCCAACAG
CTAGGAGATGAACAGTTATTTGAGGCTTGGGAGCGCTATAAGGAGTTACTGAGGAAATGCCCTCAGCATGGATACCCAGATTGGCTGCAGATCCAGTTGTTTTATAATGG
TCTAAATCCAAATACTAAAACCATTGTTGATGCAGCTGCAGGGGGACTCTGTTGTCCAAGACCGTAG
Protein sequenceShow/hide protein sequence
MCVPSPPTNSFDDGAAAAAVHRRRALLRAVNDDFCVAIQAVGLRLSMSLRNFGIGLCNLCSRENMFQLSGAKLSEGVFVGSFLSMSSTIVDSNLLIHLLGGEVHGGEQDP
SPGPVLQEDKEASPIWKYFETLSLASQRCNSATTSPEEEASRFYLLNVSTLRICTPSVEACIWDKARDWLRSLPSGSITTWDALVQAFLAKYFPPAKTVKLRTEIGTFQQ
LGDEQLFEAWERYKELLRKCPQHGYPDWLQIQLFYNGLNPNTKTIVDAAAGGLCCPRP