; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0008886 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008886
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr9:31769611..31770174
RNA-Seq ExpressionLag0008886
SyntenyLag0008886
Gene Ontology termsGO:0000373 - Group II intron splicing (biological process)
GO:0010239 - chloroplast mRNA processing (biological process)
GO:0009570 - chloroplast stroma (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571207.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]1.9e-8788.65Show/hide
Query:  VSYNIMINVYATAGLYEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCKYLEAEEIINSMQEKGIPTSCAHFDLLLSALAKAGMIRKAERIYDELQTAG
        VSYNIM NVYATAGL EETEKLFKAMEQDG LPDSFTYFSLIRAYT +CKYLEAEEIINSM+E GIPTSCAH+DLLLSALAK GMIRKAE++YD+L T G
Subjt:  VSYNIMINVYATAGLYEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCKYLEAEEIINSMQEKGIPTSCAHFDLLLSALAKAGMIRKAERIYDELQTAG

Query:  LNPDITCNRTLMRGYLDYGYVKEGIKFFESTCKYAEGDRFIMSAAVHFYKLEGKEDEALNILDSMKSLGISFLKDLRVGSKLESA
        LNPD+TCNRTLMRGYLDYGYVKEGI+FFES+CKYA GDRFIMSAAVHFYK+EGKEDEALNILDSMKSLG+SFLKDLRVG KLESA
Subjt:  LNPDITCNRTLMRGYLDYGYVKEGIKFFESTCKYAEGDRFIMSAAVHFYKLEGKEDEALNILDSMKSLGISFLKDLRVGSKLESA

XP_004140061.1 pentatricopeptide repeat-containing protein At5g27270 [Cucumis sativus]1.5e-8787.57Show/hide
Query:  VSYNIMINVYATAGLYEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCKYLEAEEIINSMQEKGIPTSCAHFDLLLSALAKAGMIRKAERIYDELQTAG
        VSYNIM+NVYA AGL+EETE L KAMEQD  +PDSFTYFSLIRAYTQSCKY EAE+IINSMQEKGIPT+CAH+DLLLSALAKAGMIRKAER+YDELQTAG
Subjt:  VSYNIMINVYATAGLYEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCKYLEAEEIINSMQEKGIPTSCAHFDLLLSALAKAGMIRKAERIYDELQTAG

Query:  LNPDITCNRTLMRGYLDYGYVKEGIKFFESTCKYAEGDRFIMSAAVHFYKLEGKEDEALNILDSMKSLGISFLKDLRVGSKLESA
        L+PD+TCNRTLMRGYLDYGYV+EGIKFFESTCKYA GDRFIMSAAVHFYK EGKEDEALNILDSMK+LG+SFLKDL++G KLESA
Subjt:  LNPDITCNRTLMRGYLDYGYVKEGIKFFESTCKYAEGDRFIMSAAVHFYKLEGKEDEALNILDSMKSLGISFLKDLRVGSKLESA

XP_022944143.1 pentatricopeptide repeat-containing protein At5g27270 [Cucurbita moschata]1.9e-8788.65Show/hide
Query:  VSYNIMINVYATAGLYEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCKYLEAEEIINSMQEKGIPTSCAHFDLLLSALAKAGMIRKAERIYDELQTAG
        VSYNIM NVYATAGL EETEKLFKAMEQDG LPDSFTYFSLIRAYT +CKYLEAEEIINSM+E GIPTSCAH+DLLLSALAK GMIRKAE++YD+L T G
Subjt:  VSYNIMINVYATAGLYEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCKYLEAEEIINSMQEKGIPTSCAHFDLLLSALAKAGMIRKAERIYDELQTAG

Query:  LNPDITCNRTLMRGYLDYGYVKEGIKFFESTCKYAEGDRFIMSAAVHFYKLEGKEDEALNILDSMKSLGISFLKDLRVGSKLESA
        LNPD+TCNRTLMRGYLDYGYVKEGI+FFES+CKYA GDRFIMSAAVHFYK+EGKEDEALNILDSMKSLG+SFLKDLRVG KLESA
Subjt:  LNPDITCNRTLMRGYLDYGYVKEGIKFFESTCKYAEGDRFIMSAAVHFYKLEGKEDEALNILDSMKSLGISFLKDLRVGSKLESA

XP_023512697.1 pentatricopeptide repeat-containing protein At5g27270 [Cucurbita pepo subsp. pepo]3.9e-8889.19Show/hide
Query:  VSYNIMINVYATAGLYEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCKYLEAEEIINSMQEKGIPTSCAHFDLLLSALAKAGMIRKAERIYDELQTAG
        VSYNIM NVYATAGL EETEKLFKAMEQDG LPDSFTYFSLIRAYT +CKY EAEEIINSM+EKGIPTSCAH+DLLLSALAK GMIRKAE++YD+LQT G
Subjt:  VSYNIMINVYATAGLYEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCKYLEAEEIINSMQEKGIPTSCAHFDLLLSALAKAGMIRKAERIYDELQTAG

Query:  LNPDITCNRTLMRGYLDYGYVKEGIKFFESTCKYAEGDRFIMSAAVHFYKLEGKEDEALNILDSMKSLGISFLKDLRVGSKLESA
        LNPD+TCNRTLMRGYLDYGYVKEGI+FFES+CKYA GDRFIMSAAVHFYK+EGKEDEALNILDSMKSLG+SFLKDLRVG KLESA
Subjt:  LNPDITCNRTLMRGYLDYGYVKEGIKFFESTCKYAEGDRFIMSAAVHFYKLEGKEDEALNILDSMKSLGISFLKDLRVGSKLESA

XP_038900459.1 pentatricopeptide repeat-containing protein At5g27270 [Benincasa hispida]2.4e-9090.81Show/hide
Query:  VSYNIMINVYATAGLYEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCKYLEAEEIINSMQEKGIPTSCAHFDLLLSALAKAGMIRKAERIYDELQTAG
        VSYNIM+NVYA AGL+EETEK+FKA+EQDGF PDSFTYFSLIRAYTQSCKY EAE+IINSMQEKGIPTSCAH+DLLLSALAKAGMIRKAER+YDELQTAG
Subjt:  VSYNIMINVYATAGLYEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCKYLEAEEIINSMQEKGIPTSCAHFDLLLSALAKAGMIRKAERIYDELQTAG

Query:  LNPDITCNRTLMRGYLDYGYVKEGIKFFESTCKYAEGDRFIMSAAVHFYKLEGKEDEALNILDSMKSLGISFLKDLRVGSKLESA
        L PD+TCNRTLMRGYLDYGYVKEGIKFFESTCKYA GDRFIMSAAVHFYK+EGKEDEALNILDSMK+LGISFLKDL+VGSK+ESA
Subjt:  LNPDITCNRTLMRGYLDYGYVKEGIKFFESTCKYAEGDRFIMSAAVHFYKLEGKEDEALNILDSMKSLGISFLKDLRVGSKLESA

TrEMBL top hitse value%identityAlignment
A0A0A0KE22 PPR_long domain-containing protein7.1e-8887.57Show/hide
Query:  VSYNIMINVYATAGLYEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCKYLEAEEIINSMQEKGIPTSCAHFDLLLSALAKAGMIRKAERIYDELQTAG
        VSYNIM+NVYA AGL+EETE L KAMEQD  +PDSFTYFSLIRAYTQSCKY EAE+IINSMQEKGIPT+CAH+DLLLSALAKAGMIRKAER+YDELQTAG
Subjt:  VSYNIMINVYATAGLYEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCKYLEAEEIINSMQEKGIPTSCAHFDLLLSALAKAGMIRKAERIYDELQTAG

Query:  LNPDITCNRTLMRGYLDYGYVKEGIKFFESTCKYAEGDRFIMSAAVHFYKLEGKEDEALNILDSMKSLGISFLKDLRVGSKLESA
        L+PD+TCNRTLMRGYLDYGYV+EGIKFFESTCKYA GDRFIMSAAVHFYK EGKEDEALNILDSMK+LG+SFLKDL++G KLESA
Subjt:  LNPDITCNRTLMRGYLDYGYVKEGIKFFESTCKYAEGDRFIMSAAVHFYKLEGKEDEALNILDSMKSLGISFLKDLRVGSKLESA

A0A1S3CJB8 LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g272706.0e-8787.57Show/hide
Query:  VSYNIMINVYATAGLYEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCKYLEAEEIINSMQEKGIPTSCAHFDLLLSALAKAGMIRKAERIYDELQTAG
        VSYNIM+NVYA AGL+EETE LFK MEQD  LPDSFTYFSLIRAYTQS KY EAE++INSMQEKGIPTSCAH+DLLLSALAKAGMIRKAER+YDELQTAG
Subjt:  VSYNIMINVYATAGLYEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCKYLEAEEIINSMQEKGIPTSCAHFDLLLSALAKAGMIRKAERIYDELQTAG

Query:  LNPDITCNRTLMRGYLDYGYVKEGIKFFESTCKYAEGDRFIMSAAVHFYKLEGKEDEALNILDSMKSLGISFLKDLRVGSKLESA
        L+PD+TCNRTLMRGYLDYGYV+EGI+FFESTCKYA GDRFIMSAAVHFYK EGKEDEALNILDSMK+LGISFLKDL++G KLESA
Subjt:  LNPDITCNRTLMRGYLDYGYVKEGIKFFESTCKYAEGDRFIMSAAVHFYKLEGKEDEALNILDSMKSLGISFLKDLRVGSKLESA

A0A5A7THY4 Pentatricopeptide repeat-containing protein6.0e-8787.57Show/hide
Query:  VSYNIMINVYATAGLYEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCKYLEAEEIINSMQEKGIPTSCAHFDLLLSALAKAGMIRKAERIYDELQTAG
        VSYNIM+NVYA AGL+EETE LFK MEQD  LPDSFTYFSLIRAYTQS KY EAE++INSMQEKGIPTSCAH+DLLLSALAKAGMIRKAER+YDELQTAG
Subjt:  VSYNIMINVYATAGLYEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCKYLEAEEIINSMQEKGIPTSCAHFDLLLSALAKAGMIRKAERIYDELQTAG

Query:  LNPDITCNRTLMRGYLDYGYVKEGIKFFESTCKYAEGDRFIMSAAVHFYKLEGKEDEALNILDSMKSLGISFLKDLRVGSKLESA
        L+PD+TCNRTLMRGYLDYGYV+EGI+FFESTCKYA GDRFIMSAAVHFYK EGKEDEALNILDSMK+LGISFLKDL++G KLESA
Subjt:  LNPDITCNRTLMRGYLDYGYVKEGIKFFESTCKYAEGDRFIMSAAVHFYKLEGKEDEALNILDSMKSLGISFLKDLRVGSKLESA

A0A5D3BQE2 Pentatricopeptide repeat-containing protein6.0e-8787.57Show/hide
Query:  VSYNIMINVYATAGLYEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCKYLEAEEIINSMQEKGIPTSCAHFDLLLSALAKAGMIRKAERIYDELQTAG
        VSYNIM+NVYA AGL+EETE LFK MEQD  LPDSFTYFSLIRAYTQS KY EAE++INSMQEKGIPTSCAH+DLLLSALAKAGMIRKAER+YDELQTAG
Subjt:  VSYNIMINVYATAGLYEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCKYLEAEEIINSMQEKGIPTSCAHFDLLLSALAKAGMIRKAERIYDELQTAG

Query:  LNPDITCNRTLMRGYLDYGYVKEGIKFFESTCKYAEGDRFIMSAAVHFYKLEGKEDEALNILDSMKSLGISFLKDLRVGSKLESA
        L+PD+TCNRTLMRGYLDYGYV+EGI+FFESTCKYA GDRFIMSAAVHFYK EGKEDEALNILDSMK+LGISFLKDL++G KLESA
Subjt:  LNPDITCNRTLMRGYLDYGYVKEGIKFFESTCKYAEGDRFIMSAAVHFYKLEGKEDEALNILDSMKSLGISFLKDLRVGSKLESA

A0A6J1FXR3 pentatricopeptide repeat-containing protein At5g272709.3e-8888.65Show/hide
Query:  VSYNIMINVYATAGLYEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCKYLEAEEIINSMQEKGIPTSCAHFDLLLSALAKAGMIRKAERIYDELQTAG
        VSYNIM NVYATAGL EETEKLFKAMEQDG LPDSFTYFSLIRAYT +CKYLEAEEIINSM+E GIPTSCAH+DLLLSALAK GMIRKAE++YD+L T G
Subjt:  VSYNIMINVYATAGLYEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCKYLEAEEIINSMQEKGIPTSCAHFDLLLSALAKAGMIRKAERIYDELQTAG

Query:  LNPDITCNRTLMRGYLDYGYVKEGIKFFESTCKYAEGDRFIMSAAVHFYKLEGKEDEALNILDSMKSLGISFLKDLRVGSKLESA
        LNPD+TCNRTLMRGYLDYGYVKEGI+FFES+CKYA GDRFIMSAAVHFYK+EGKEDEALNILDSMKSLG+SFLKDLRVG KLESA
Subjt:  LNPDITCNRTLMRGYLDYGYVKEGIKFFESTCKYAEGDRFIMSAAVHFYKLEGKEDEALNILDSMKSLGISFLKDLRVGSKLESA

SwissProt top hitse value%identityAlignment
O04647 Pentatricopeptide repeat-containing protein At5g272701.3e-3343.95Show/hide
Query:  SYNIMINVYATAGLYEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCKYLEAEEIINSMQEKGIPTSCAHFDLLLSALAKAGMIRKAERIYDELQTAGL
        SYN+M+ + AT+ L+ E ++L +AME++G   D  TY +LI+ Y +S ++ EAE+ I  ++EKGIP S +HF  LLSAL KAGM+ +AER Y ++  AG+
Subjt:  SYNIMINVYATAGLYEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCKYLEAEEIINSMQEKGIPTSCAHFDLLLSALAKAGMIRKAERIYDELQTAGL

Query:  NPDITCNRTLMRGYLDYGYVKEGIKFFESTCKYA-EGDRFIMSAAVHFYKLEGKEDE
        +PD  C RT+++GY+  G  ++GI F+E   + + E DRF+ S     YK  GKE +
Subjt:  NPDITCNRTLMRGYLDYGYVKEGIKFFESTCKYA-EGDRFIMSAAVHFYKLEGKEDE

Q76C99 Protein Rf1, mitochondrial7.0e-1626.74Show/hide
Query:  VSYNIMINVYATAGLYEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCKYLEAEEIINSMQEKGIPTSCAHFDLLLSALAKAGMIRKAERIYDELQTAG
        V+YN +I     A   ++  ++   M ++G +PD  TY S++  Y  S +  EA   +  M+  G+      + LL+  L K G   +A +I+D +   G
Subjt:  VSYNIMINVYATAGLYEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCKYLEAEEIINSMQEKGIPTSCAHFDLLLSALAKAGMIRKAERIYDELQTAG

Query:  LNPDITCNRTLMRGYLDYGYVKEGIKFFESTCKYA-EGDRFIMSAAVHFYKLEGKEDEALNILDSMKSLGIS
        L P+IT   TL++GY   G + E     +   +     D ++ S  +  Y  +GK D+A+ +   M+  G++
Subjt:  LNPDITCNRTLMRGYLDYGYVKEGIKFFESTCKYA-EGDRFIMSAAVHFYKLEGKEDEALNILDSMKSLGIS

Q9C9U0 Pentatricopeptide repeat-containing protein At1g737101.1e-1626.35Show/hide
Query:  VSYNIMINVYATAGLYEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCKYLEAEEIINSMQEKGIPTSCAHFDLLLSALAKAGMIRKAERIYDELQTAG
        + YN+MI  Y  A L+E+   LFK M+  G  PD  TY SL +         EA+ I+  M + G    C  +  ++++  + G++  A  +Y+ ++  G
Subjt:  VSYNIMINVYATAGLYEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCKYLEAEEIINSMQEKGIPTSCAHFDLLLSALAKAGMIRKAERIYDELQTAG

Query:  LNPDITCNRTLMRGYLDYGYVKEGIKFFESTCKY-AEGDRFIMSAAVHFYKLEGKEDEALNILDSMK
        + P+     +L+ G+ + G V+E I++F    ++  + +  ++++ +  Y   G  +EA  + D MK
Subjt:  LNPDITCNRTLMRGYLDYGYVKEGIKFFESTCKY-AEGDRFIMSAAVHFYKLEGKEDEALNILDSMK

Q9FLD8 Pentatricopeptide repeat-containing protein At5g39980, chloroplastic9.1e-1626.9Show/hide
Query:  VSYNIMINVYATAGLYEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCKYLEAEEIINSMQEKGIPTSCAHFDLLLSALAKAGMIRKAERIYDELQTAG
        V+YN MINVY  A L+ E   L K M + G LP++ +Y +L+  Y ++ K+LEA  +   M+E          ++++    +  M+++A+R++  L+   
Subjt:  VSYNIMINVYATAGLYEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCKYLEAEEIINSMQEKGIPTSCAHFDLLLSALAKAGMIRKAERIYDELQTAG

Query:  LNPDITCNRTLMRGYLDYGYVKEGIKFFE-STCKYAEGDRFIMSAAVHFYKLEGKEDEALNILDSMKSLGI
        + P++    T++R Y +     E I  F     K  E +    +  +  Y    + ++A N++  M+S GI
Subjt:  LNPDITCNRTLMRGYLDYGYVKEGIKFFE-STCKYAEGDRFIMSAAVHFYKLEGKEDEALNILDSMKSLGI

Q9LYZ9 Pentatricopeptide repeat-containing protein At5g028601.0e-1428.16Show/hide
Query:  SYNIMINVYATAGLYEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCKYLEAEEIINSMQEKGIPTSCAHFDLLLSALAKAGMIRKAERIYDELQTAGL
        +YN +I       L++E  ++F+ M+  GF  D  TY +L+  Y +S +  EA +++N M   G   S   ++ L+SA A+ GM+ +A  + +++   G 
Subjt:  SYNIMINVYATAGLYEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCKYLEAEEIINSMQEKGIPTSCAHFDLLLSALAKAGMIRKAERIYDELQTAGL

Query:  NPDITCNRTLMRGYLDYGYVKEGIKFFE----STCKYAEGDRFIMSAAVHFYKLEGKEDEALNILDSMKSLGIS
         PD+    TL+ G+   G V+  +  FE    + CK    +    +A +  Y   GK  E + I D +   G+S
Subjt:  NPDITCNRTLMRGYLDYGYVKEGIKFFE----STCKYAEGDRFIMSAAVHFYKLEGKEDEALNILDSMKSLGIS

Arabidopsis top hitse value%identityAlignment
AT1G73710.1 Pentatricopeptide repeat (PPR) superfamily protein7.6e-1826.35Show/hide
Query:  VSYNIMINVYATAGLYEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCKYLEAEEIINSMQEKGIPTSCAHFDLLLSALAKAGMIRKAERIYDELQTAG
        + YN+MI  Y  A L+E+   LFK M+  G  PD  TY SL +         EA+ I+  M + G    C  +  ++++  + G++  A  +Y+ ++  G
Subjt:  VSYNIMINVYATAGLYEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCKYLEAEEIINSMQEKGIPTSCAHFDLLLSALAKAGMIRKAERIYDELQTAG

Query:  LNPDITCNRTLMRGYLDYGYVKEGIKFFESTCKY-AEGDRFIMSAAVHFYKLEGKEDEALNILDSMK
        + P+     +L+ G+ + G V+E I++F    ++  + +  ++++ +  Y   G  +EA  + D MK
Subjt:  LNPDITCNRTLMRGYLDYGYVKEGIKFFESTCKY-AEGDRFIMSAAVHFYKLEGKEDEALNILDSMK

AT2G35130.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.7e-1525.44Show/hide
Query:  SYNIMINVYATAGLYEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCKYLEAEEIINSMQEKGIPTSCAHFDLLLSALAKAGMIRKAERIYDELQTAGL
        +Y  ++N +A  GL E+ E++F+ +++DG  PD + Y +L+ +Y+++     A EI + MQ  G     A +++++ A  +AG+   AE +++E++  G+
Subjt:  SYNIMINVYATAGLYEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCKYLEAEEIINSMQEKGIPTSCAHFDLLLSALAKAGMIRKAERIYDELQTAGL

Query:  NPDITCNRTLMRGY---LDYGYVKEGIKFFESTCKYAEGDRFIMSAAVHFYKLEGKEDEALNILDSMKS
         P +  +  L+  Y    D    +  +K  E +    E D F++++ ++ Y   G+  +   IL  M++
Subjt:  NPDITCNRTLMRGY---LDYGYVKEGIKFFESTCKYAEGDRFIMSAAVHFYKLEGKEDEALNILDSMKS

AT5G02860.1 Pentatricopeptide repeat (PPR) superfamily protein7.1e-1628.16Show/hide
Query:  SYNIMINVYATAGLYEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCKYLEAEEIINSMQEKGIPTSCAHFDLLLSALAKAGMIRKAERIYDELQTAGL
        +YN +I       L++E  ++F+ M+  GF  D  TY +L+  Y +S +  EA +++N M   G   S   ++ L+SA A+ GM+ +A  + +++   G 
Subjt:  SYNIMINVYATAGLYEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCKYLEAEEIINSMQEKGIPTSCAHFDLLLSALAKAGMIRKAERIYDELQTAGL

Query:  NPDITCNRTLMRGYLDYGYVKEGIKFFE----STCKYAEGDRFIMSAAVHFYKLEGKEDEALNILDSMKSLGIS
         PD+    TL+ G+   G V+  +  FE    + CK    +    +A +  Y   GK  E + I D +   G+S
Subjt:  NPDITCNRTLMRGYLDYGYVKEGIKFFE----STCKYAEGDRFIMSAAVHFYKLEGKEDEALNILDSMKSLGIS

AT5G27270.1 Tetratricopeptide repeat (TPR)-like superfamily protein9.0e-3543.95Show/hide
Query:  SYNIMINVYATAGLYEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCKYLEAEEIINSMQEKGIPTSCAHFDLLLSALAKAGMIRKAERIYDELQTAGL
        SYN+M+ + AT+ L+ E ++L +AME++G   D  TY +LI+ Y +S ++ EAE+ I  ++EKGIP S +HF  LLSAL KAGM+ +AER Y ++  AG+
Subjt:  SYNIMINVYATAGLYEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCKYLEAEEIINSMQEKGIPTSCAHFDLLLSALAKAGMIRKAERIYDELQTAGL

Query:  NPDITCNRTLMRGYLDYGYVKEGIKFFESTCKYA-EGDRFIMSAAVHFYKLEGKEDE
        +PD  C RT+++GY+  G  ++GI F+E   + + E DRF+ S     YK  GKE +
Subjt:  NPDITCNRTLMRGYLDYGYVKEGIKFFESTCKYA-EGDRFIMSAAVHFYKLEGKEDE

AT5G39980.1 Tetratricopeptide repeat (TPR)-like superfamily protein6.5e-1726.9Show/hide
Query:  VSYNIMINVYATAGLYEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCKYLEAEEIINSMQEKGIPTSCAHFDLLLSALAKAGMIRKAERIYDELQTAG
        V+YN MINVY  A L+ E   L K M + G LP++ +Y +L+  Y ++ K+LEA  +   M+E          ++++    +  M+++A+R++  L+   
Subjt:  VSYNIMINVYATAGLYEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCKYLEAEEIINSMQEKGIPTSCAHFDLLLSALAKAGMIRKAERIYDELQTAG

Query:  LNPDITCNRTLMRGYLDYGYVKEGIKFFE-STCKYAEGDRFIMSAAVHFYKLEGKEDEALNILDSMKSLGI
        + P++    T++R Y +     E I  F     K  E +    +  +  Y    + ++A N++  M+S GI
Subjt:  LNPDITCNRTLMRGYLDYGYVKEGIKFFE-STCKYAEGDRFIMSAAVHFYKLEGKEDEALNILDSMKSLGI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGTCAGCTACAACATCATGATCAATGTATATGCTACTGCCGGACTTTATGAAGAAACAGAAAAGCTTTTCAAAGCAATGGAGCAAGATGGTTTCTTACCCGATTC
TTTTACCTACTTCTCGCTCATTCGAGCGTACACACAGAGTTGCAAATACTTGGAGGCTGAGGAAATCATTAACTCTATGCAAGAAAAAGGCATCCCCACATCTTGTGCAC
ATTTCGACCTGTTGCTGTCAGCTTTGGCAAAGGCAGGGATGATAAGGAAAGCAGAAAGAATCTATGACGAACTTCAAACAGCTGGTTTAAATCCCGACATTACGTGCAAT
CGGACCTTGATGAGGGGTTACCTGGACTATGGATATGTCAAAGAAGGCATCAAGTTCTTTGAATCTACATGCAAATATGCAGAAGGAGACAGGTTTATAATGAGTGCAGC
TGTGCATTTTTACAAGCTTGAAGGAAAAGAGGATGAAGCATTGAATATTTTGGATTCCATGAAAAGTTTGGGCATTTCATTCTTGAAAGACCTTCGAGTTGGATCGAAGC
TAGAGTCTGCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGGTCAGCTACAACATCATGATCAATGTATATGCTACTGCCGGACTTTATGAAGAAACAGAAAAGCTTTTCAAAGCAATGGAGCAAGATGGTTTCTTACCCGATTC
TTTTACCTACTTCTCGCTCATTCGAGCGTACACACAGAGTTGCAAATACTTGGAGGCTGAGGAAATCATTAACTCTATGCAAGAAAAAGGCATCCCCACATCTTGTGCAC
ATTTCGACCTGTTGCTGTCAGCTTTGGCAAAGGCAGGGATGATAAGGAAAGCAGAAAGAATCTATGACGAACTTCAAACAGCTGGTTTAAATCCCGACATTACGTGCAAT
CGGACCTTGATGAGGGGTTACCTGGACTATGGATATGTCAAAGAAGGCATCAAGTTCTTTGAATCTACATGCAAATATGCAGAAGGAGACAGGTTTATAATGAGTGCAGC
TGTGCATTTTTACAAGCTTGAAGGAAAAGAGGATGAAGCATTGAATATTTTGGATTCCATGAAAAGTTTGGGCATTTCATTCTTGAAAGACCTTCGAGTTGGATCGAAGC
TAGAGTCTGCGTGA
Protein sequenceShow/hide protein sequence
MQVSYNIMINVYATAGLYEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCKYLEAEEIINSMQEKGIPTSCAHFDLLLSALAKAGMIRKAERIYDELQTAGLNPDITCN
RTLMRGYLDYGYVKEGIKFFESTCKYAEGDRFIMSAAVHFYKLEGKEDEALNILDSMKSLGISFLKDLRVGSKLESA