; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0008928 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008928
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDEAD/DEAH box helicase domain-containing protein
Genome locationchr9:32566503..32568944
RNA-Seq ExpressionLag0008928
SyntenyLag0008928
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CEL76513.1 TPA: RNA helicase, putative [Toxoplasma gondii VEG]4.6e-0455.1Show/hide
Query:  LPPSSKVPSRASLAP--SPSSKTLLSVATSPSSKALLSTAPSPSSKALLSTTPSPSSKVLLSVAPSPSSKALLSAAHSPSSKALLSTALSPSSKVLLS
        L P+S   S  SL+P  SPSS   LS A+SPSS   LS A SPSS   LS   SPSS   LS A SPSS   LS A SPSS   LS A SPSS   LS
Subjt:  LPPSSKVPSRASLAP--SPSSKTLLSVATSPSSKALLSTAPSPSSKALLSTTPSPSSKVLLSVAPSPSSKALLSAAHSPSSKALLSTALSPSSKVLLS

ESS32480.1 DEAD/DEAH box helicase domain-containing protein, partial [Toxoplasma gondii VEG]4.6e-0455.1Show/hide
Query:  LPPSSKVPSRASLAP--SPSSKTLLSVATSPSSKALLSTAPSPSSKALLSTTPSPSSKVLLSVAPSPSSKALLSAAHSPSSKALLSTALSPSSKVLLS
        L P+S   S  SL+P  SPSS   LS A+SPSS   LS A SPSS   LS   SPSS   LS A SPSS   LS A SPSS   LS A SPSS   LS
Subjt:  LPPSSKVPSRASLAP--SPSSKTLLSVATSPSSKALLSTAPSPSSKALLSTTPSPSSKVLLSVAPSPSSKALLSAAHSPSSKALLSTALSPSSKVLLS

TrEMBL top hitse value%identityAlignment
A0A0F7V8R5 RNA helicase, putative2.2e-0455.1Show/hide
Query:  LPPSSKVPSRASLAP--SPSSKTLLSVATSPSSKALLSTAPSPSSKALLSTTPSPSSKVLLSVAPSPSSKALLSAAHSPSSKALLSTALSPSSKVLLS
        L P+S   S  SL+P  SPSS   LS A+SPSS   LS A SPSS   LS   SPSS   LS A SPSS   LS A SPSS   LS A SPSS   LS
Subjt:  LPPSSKVPSRASLAP--SPSSKTLLSVATSPSSKALLSTAPSPSSKALLSTTPSPSSKVLLSVAPSPSSKALLSAAHSPSSKALLSTALSPSSKVLLS

A0A507CAM6 Uncharacterized protein6.5e-0445.54Show/hide
Query:  PPSSKVPS------RASLAPSPSSKTLLSVATSPSSKALLSTAPSPSSKALLSTTPSPSSKVLLSVAPSPSSKALLSAAHSPSSKALLSTALSPSSKVLL
        P +S  PS      +AS APSP + TL S A SP +  L S APSP +  L S  PSP +  L S APSP +  L SAA SP +  L S A SP +  L 
Subjt:  PPSSKVPS------RASLAPSPSSKTLLSVATSPSSKALLSTAPSPSSKALLSTTPSPSSKVLLSVAPSPSSKALLSAAHSPSSKALLSTALSPSSKVLL

Query:  S
        S
Subjt:  S

V5BAB7 DEAD/DEAH box helicase domain-containing protein (Fragment)2.2e-0455.1Show/hide
Query:  LPPSSKVPSRASLAP--SPSSKTLLSVATSPSSKALLSTAPSPSSKALLSTTPSPSSKVLLSVAPSPSSKALLSAAHSPSSKALLSTALSPSSKVLLS
        L P+S   S  SL+P  SPSS   LS A+SPSS   LS A SPSS   LS   SPSS   LS A SPSS   LS A SPSS   LS A SPSS   LS
Subjt:  LPPSSKVPSRASLAP--SPSSKTLLSVATSPSSKALLSTAPSPSSKALLSTTPSPSSKVLLSVAPSPSSKALLSAAHSPSSKALLSTALSPSSKVLLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCTTCGTTGCTACCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGCTTCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCGCTCGCTCCTTCTCC
AAGTTCGAAGACGCTTCTCTCCGTTGCTACTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTACTCCTTCTCCAA
GTTCGAAGGTGCTTCTCTCCGTTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGCTGCTCATTCTCCAAGTTCGAAGGCGCTTCTCTCTACTGCTCTTTCTCCAAGT
TCGAAGGTGCTTCTCTCCACCCCTCTTTTTGAAGGTTCGCCACTGAGGTTCTCCTTCTCCAAGTTCGAAGGTTCACCGTTGCTCCTTTTCAAATGTTTGGCGACGGTTGA
CGTCCTCGTTCCGCTTTATCTTCAAATGTTGGTGGTGAAGTCACTGCAATTGAATCTGATGACGACCGTTGTAGGCGAGTCGAGTCTGGTGACCACCCCTGCAGGTTACT
CAGATCACCCAATAAAATGGGGACTGGGTCTAGCAGGAGTGCATCGCTGTAGGCGAATGTGGAGTGCATCACTGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCA
GATCACCCAATAAAATGGGGAATAGAGTGCATCACTGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGT
GAAATCACTGCAAGCGAATTTGGTGACGGCTGTTGCACGAAGCTTACACATTCAAGGAAGAAAGAAACAAATTGCCAATCACAAATTGCCACTGATCCATCGGATAACAT
CAGCCAAGTTCAATCAGATTATGCCACGTGGCAATTGGACCCAAGCCCAAGCCCATATGAGGCCGGTCCAGGAGATCATCAAGTCAACAGACCGATCATCCAGGAGGATC
AACAAGCTAACAAGCCGATCTAACAAATCAAAAAGTCAACAGGCCGATCATCCAGGAAGATCAACAAGCCAACAAGTCGATCCAAGAGATCATCACGCCAACAGGCCGAT
CATCCAAGAAGATCAACAAGCCAATAGGCCGATCCAAGAGATCATCAACCTAACAGACCGATCATCCAGGAAGATAACAAGCCAACAAGCCGATCCAAGAGATCATCACG
CCAACAGGCCGATCATCCAAGAAGATCAACAAGCCAATAGGCCGATCCAAGAGATCACCAAACCCAAGACCAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGCGCTTCGTTGCTACCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGCTTCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCGCTCGCTCCTTCTCC
AAGTTCGAAGACGCTTCTCTCCGTTGCTACTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTACTCCTTCTCCAA
GTTCGAAGGTGCTTCTCTCCGTTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGCTGCTCATTCTCCAAGTTCGAAGGCGCTTCTCTCTACTGCTCTTTCTCCAAGT
TCGAAGGTGCTTCTCTCCACCCCTCTTTTTGAAGGTTCGCCACTGAGGTTCTCCTTCTCCAAGTTCGAAGGTTCACCGTTGCTCCTTTTCAAATGTTTGGCGACGGTTGA
CGTCCTCGTTCCGCTTTATCTTCAAATGTTGGTGGTGAAGTCACTGCAATTGAATCTGATGACGACCGTTGTAGGCGAGTCGAGTCTGGTGACCACCCCTGCAGGTTACT
CAGATCACCCAATAAAATGGGGACTGGGTCTAGCAGGAGTGCATCGCTGTAGGCGAATGTGGAGTGCATCACTGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCA
GATCACCCAATAAAATGGGGAATAGAGTGCATCACTGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGT
GAAATCACTGCAAGCGAATTTGGTGACGGCTGTTGCACGAAGCTTACACATTCAAGGAAGAAAGAAACAAATTGCCAATCACAAATTGCCACTGATCCATCGGATAACAT
CAGCCAAGTTCAATCAGATTATGCCACGTGGCAATTGGACCCAAGCCCAAGCCCATATGAGGCCGGTCCAGGAGATCATCAAGTCAACAGACCGATCATCCAGGAGGATC
AACAAGCTAACAAGCCGATCTAACAAATCAAAAAGTCAACAGGCCGATCATCCAGGAAGATCAACAAGCCAACAAGTCGATCCAAGAGATCATCACGCCAACAGGCCGAT
CATCCAAGAAGATCAACAAGCCAATAGGCCGATCCAAGAGATCATCAACCTAACAGACCGATCATCCAGGAAGATAACAAGCCAACAAGCCGATCCAAGAGATCATCACG
CCAACAGGCCGATCATCCAAGAAGATCAACAAGCCAATAGGCCGATCCAAGAGATCACCAAACCCAAGACCAAATAG
Protein sequenceShow/hide protein sequence
MRFVATFLQVRRFSHALLQLLPPSSKVPSRASLAPSPSSKTLLSVATSPSSKALLSTAPSPSSKALLSTTPSPSSKVLLSVAPSPSSKALLSAAHSPSSKALLSTALSPS
SKVLLSTPLFEGSPLRFSFSKFEGSPLLLFKCLATVDVLVPLYLQMLVVKSLQLNLMTTVVGESSLVTTPAGYSDHPIKWGLGLAGVHRCRRMWSASLKANLVTTPAGYS
DHPIKWGIECITEGESGDYPCRLLRSPNKMGTGLAGVKSLQANLVTAVARSLHIQGRKKQIANHKLPLIHRITSAKFNQIMPRGNWTQAQAHMRPVQEIIKSTDRSSRRI
NKLTSRSNKSKSQQADHPGRSTSQQVDPRDHHANRPIIQEDQQANRPIQEIINLTDRSSRKITSQQADPRDHHANRPIIQEDQQANRPIQEITKPKTK