| GenBank top hits | e value | %identity | Alignment |
|---|
| GAU19483.1 hypothetical protein TSUD_77270 [Trifolium subterraneum] | 3.5e-204 | 39.56 | Show/hide |
Query: AVAASSSATNIISSSLGHPLSTVLTVKLDDKNYLLWKDMVLAILRGQKVDMYVLGTKAQPSELIETTTESGKMLLSNMLYEEWMTVDQALSGWLFGSMSP
A AA S+ N + SS ++VKLD NY LWK +VL ++RG K+D Y+LGT+ P E I T+++S K N + EW DQ L GW+ SM+
Subjt: AVAASSSATNIISSSLGHPLSTVLTVKLDDKNYLLWKDMVLAILRGQKVDMYVLGTKAQPSELIETTTESGKMLLSNMLYEEWMTVDQALSGWLFGSMSP
Query: AIAADVINFKTLREVWKALEEVYGDTSKACVNQFRGILQNTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSEYIPIVCAIDDKDLKT
IA +++ +T +++W + + G +++ + + + +KG MKM DYL MK + LKL GNPVS DL+ L GLDSEY P+V + D+ +
Subjt: AIAADVINFKTLREVWKALEEVYGDTSKACVNQFRGILQNTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSEYIPIVCAIDDKDLKT
Query: WQELSSILINFEGTLARYSTPTNAHFDLPDLATHLALNRQSMFDNQRQFNPSNGNRGNDNNSGSYYGSGNGQMGNNPTQGTAMVEIEEEEVEGATIFREE
W +L + L+ FE + + + TN + AT NR + + SN N N+ G G G G+ G NP Q +
Subjt: WQELSSILINFEGTLARYSTPTNAHFDLPDLATHLALNRQSMFDNQRQFNPSNGNRGNDNNSGSYYGSGNGQMGNNPTQGTAMVEIEEEEVEGATIFREE
Query: ITTCYMRFEEHFNNLHASGNGSVQGNNSNNASSSAYIATPEILHDPKWLADSGATNHVT--------------------ANARNLAV------KMDYNVL
C+ RF++ ++ + S QG S +A++A+ + D W DSGA+NHVT N LA+ K+ L
Subjt: ITTCYMRFEEHFNNLHASGNGSVQGNNSNNASSSAYIATPEILHDPKWLADSGATNHVT--------------------ANARNLAV------KMDYNVL
Query: NNILHVPEIRKNLISIASLTVDNNVVVEFHSNYCVVKDKASKKVMLHEILRNDLYQIELPSIQTPKSEIRSTSFAGLWHNRLGHASSKVIKSVLKSCNVS
++IL+VP I KNL+S++ L DNN++VEF N C VKDK + KV+L +L++ LYQ+ T ++ S WH RLGH ++KV+ VL+SC V
Subjt: NNILHVPEIRKNLISIASLTVDNNVVVEFHSNYCVVKDKASKKVMLHEILRNDLYQIELPSIQTPKSEIRSTSFAGLWHNRLGHASSKVIKSVLKSCNVS
Query: TFLNESLHFCDACQKGKSHRLPFSRSVSHTWQPLELVHCDLWGPSPIVSIVGYKYYISFVDDFTRLAHIYPLKTKGEAFSSFSQYKLLVANRFEKKIKTL
+++ FC+ACQ GK H LPF S SH +PLELVH D+WGP+PI++ G+KYY+ FVDDF+R IYPLK K E +F Q+K L N+F K+IK +
Subjt: TFLNESLHFCDACQKGKSHRLPFSRSVSHTWQPLELVHCDLWGPSPIVSIVGYKYYISFVDDFTRLAHIYPLKTKGEAFSSFSQYKLLVANRFEKKIKTL
Query: QTDWGGEFRSFTSFLRDNGIEFRHSCPHTSQQNGIVERKHRHIVEMGLTLLAQASMPLTYWWEAFSSAVYIINCLPTPILGDVSPWEQAFH---------
Q D GGE++ + GI+FR SCP+TSQQNG ERKHRHI E GLTLLAQA MPL YWWEAFS+AVY+IN LP+ + + SP+
Subjt: QTDWGGEFRSFTSFLRDNGIEFRHSCPHTSQQNGIVERKHRHIVEMGLTLLAQASMPLTYWWEAFSSAVYIINCLPTPILGDVSPWEQAFH---------
Query: ------YPCLRLYQSHKFQHHSTKCVFLGYSLAHKGYKCLSSSGRLFISCHVVFNESEFPFKSELVPSSGPSNIAL---------------VPHHSSPVA
YPCL+ Y HK Q+H+T+CVFLGYS +HKGYKCL+S GR+FIS HV+FNE FPF + + P + + S P+
Subjt: ------YPCLRLYQSHKFQHHSTKCVFLGYSLAHKGYKCLSSSGRLFISCHVVFNESEFPFKSELVPSSGPSNIAL---------------VPHHSSPVA
Query: EFQTSSPTLSTPPQDQYVSPQLSAHSPEGHSCPASVMPLYTSSMLPVDGSSDGSPELPLQISTALNSHPMQTRAKSGIFKQKDWGAFLVNSSFSPEVEPT
E + + T + QD +++ + + ++ P+ + ++ S G SH + TR+KSGI K K + ++ +EP
Subjt: EFQTSSPTLSTPPQDQYVSPQLSAHSPEGHSCPASVMPLYTSSMLPVDGSSDGSPELPLQISTALNSHPMQTRAKSGIFKQKDWGAFLVNSSFSPEVEPT
Query: SVKEALKSSQWKAAMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFKVKRKSNSSFDRCKARLVAQGFNQVPGVDFHETFSPVVKAPTIQIILAVAVMKN
+ KEAL WK AM E L NKTW LVP N++ SKW+FK K K + S +R KARLVA+GF Q G+D+ ETFSPV+KA T++IIL++AV N
Subjt: SVKEALKSSQWKAAMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFKVKRKSNSSFDRCKARLVAQGFNQVPGVDFHETFSPVVKAPTIQIILAVAVMKN
Query: WSIRQLDVNNIFLNGRLQEAVYMRQLTGYIDQSCPDYVCKLDKALYGLRQASRA
W +RQLD+NN FLNG L+E V+M Q G++D + P+++CKL KA+YGL+QA RA
Subjt: WSIRQLDVNNIFLNGRLQEAVYMRQLTGYIDQSCPDYVCKLDKALYGLRQASRA
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| GAU51268.1 hypothetical protein TSUD_412550 [Trifolium subterraneum] | 5.5e-205 | 39.81 | Show/hide |
Query: SSATNIISSSLGHPLSTVLTVKLDDKNYLLWKDMVLAILRGQKVDMYVLGTKAQPSELIETTTESGKMLLSNMLYEEWMTVDQALSGWLFGSMSPAIAAD
SSA N S + L ++++VKLD NY LWK +VL+++RG K+D Y+LGT P + + + +S K+ N + +W+ DQAL GWL SM+ IA
Subjt: SSATNIISSSLGHPLSTVLTVKLDDKNYLLWKDMVLAILRGQKVDMYVLGTKAQPSELIETTTESGKMLLSNMLYEEWMTVDQALSGWLFGSMSPAIAAD
Query: VINFKTLREVWKALEEVYGDTSKACVNQFRGILQNTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSEYIPIVCAIDDKDLKTWQELS
+++ +T +++W + + G +K+ + + NT+KG MKM +YL MK S+ LKL G+P+S DL+ L GLD+EY P+V + D+ +W ++
Subjt: VINFKTLREVWKALEEVYGDTSKACVNQFRGILQNTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSEYIPIVCAIDDKDLKTWQELS
Query: SILINFEGTLARYSTPTNAHFDLPDLATHLALNRQSMFDNQRQFN----PSNGNRGNDNNSGSYYGSGNGQMGNNPTQ---GTAMVEIEEEEVEGATIFR
+ L+ FE L +++ + L LN + F N+ +F S GN N G G G G+M N Q GT + ++
Subjt: SILINFEGTLARYSTPTNAHFDLPDLATHLALNRQSMFDNQRQFN----PSNGNRGNDNNSGSYYGSGNGQMGNNPTQ---GTAMVEIEEEEVEGATIFR
Query: EEITTCYMRFEEHFNNLHASGNGSVQGNNSNNASSSAYIATPEILHDPKWLADSGATNHVT--------------------ANARNLAV------KMDYN
C RF+ + + S QG S SA+IA+P D +W DSGA NHVT N L + K++
Subjt: EEITTCYMRFEEHFNNLHASGNGSVQGNNSNNASSSAYIATPEILHDPKWLADSGATNHVT--------------------ANARNLAV------KMDYN
Query: VLNNILHVPEIRKNLISIASLTVDNNVVVEFHSNYCVVKDKASKKVMLHEILRNDLYQIELPSIQTPKSEIRSTSFAGLWHNRLGHASSKVIKSVLKSCN
L+++L+VP+I KNL+S++ LT DNN++VEF +N C VKDK + + +L L++ LYQ+ + K S WH +LGH ++KV+ VLK CN
Subjt: VLNNILHVPEIRKNLISIASLTVDNNVVVEFHSNYCVVKDKASKKVMLHEILRNDLYQIELPSIQTPKSEIRSTSFAGLWHNRLGHASSKVIKSVLKSCN
Query: VSTFLNESLHFCDACQKGKSHRLPFSRSVSHTWQPLELVHCDLWGPSPIVSIVGYKYYISFVDDFTRLAHIYPLKTKGEAFSSFSQYKLLVANRFEKKIK
V ++ FC+ACQ GK H LPF S SH +PL L+H D+WGP+PI+S G+KYY+ F+DDF+R I+PLK K + +F Q+K L N+F KKIK
Subjt: VSTFLNESLHFCDACQKGKSHRLPFSRSVSHTWQPLELVHCDLWGPSPIVSIVGYKYYISFVDDFTRLAHIYPLKTKGEAFSSFSQYKLLVANRFEKKIK
Query: TLQTDWGGEFRSFTSFLRDNGIEFRHSCPHTSQQNGIVERKHRHIVEMGLTLLAQASMPLTYWWEAFSSAVYIINCLPTPILGDVSPWEQAFH-------
+Q D GGE+++ + GI+FR SCP+TSQQNG ERKHRH+ E+GLTLLAQA MPL YWWEAFS+AVY+IN LP+ + + SP+ F
Subjt: TLQTDWGGEFRSFTSFLRDNGIEFRHSCPHTSQQNGIVERKHRHIVEMGLTLLAQASMPLTYWWEAFSSAVYIINCLPTPILGDVSPWEQAFH-------
Query: --------YPCLRLYQSHKFQHHSTKCVFLGYSLAHKGYKCLSSSGRLFISCHVVFNESEFPFKSELVPSSGP------SNIALVPHHSSPVAEFQTSSP
YPCL+ Y HK Q H+T+CVF+GYS +HKGYKC++S GR+F+S HV+FNE+ FPF + + P ++ L+P S+ P
Subjt: --------YPCLRLYQSHKFQHHSTKCVFLGYSLAHKGYKCLSSSGRLFISCHVVFNESEFPFKSELVPSSGP------SNIALVPHHSSPVAEFQTSSP
Query: TLSTPPQDQYVSPQLSAHSPEGHSCPASVMPLYTSSMLPVDGSSDGSPELPLQISTAL-------------NSHPMQTRAKSGIFKQKDWGAFLVNSSFS
+T S + S ++ +S + T++ D +D S + + ++ + N+H M+TR+K GI K K + + S
Subjt: TLSTPPQDQYVSPQLSAHSPEGHSCPASVMPLYTSSMLPVDGSSDGSPELPLQISTAL-------------NSHPMQTRAKSGIFKQKDWGAFLVNSSFS
Query: PEVEPTSVKEALKSSQWKAAMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFKVKRKSNSSFDRCKARLVAQGFNQVPGVDFHETFSPVVKAPTIQIILA
E EP SVKEAL WK AM+ E L N TWTLVP N+I SKWIFK K KS+ S +R KARLVA+GF Q G+DF ETFSPVVK+ T++IIL
Subjt: PEVEPTSVKEALKSSQWKAAMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFKVKRKSNSSFDRCKARLVAQGFNQVPGVDFHETFSPVVKAPTIQIILA
Query: VAVMKNWSIRQLDVNNIFLNGRLQEAVYMRQLTGYIDQSCPDYVCKLDKALYGLRQASRA
+AV NW +RQLD+NN FLNG+L+E V+M Q GYID + P+++CKL KA+YGL+QA RA
Subjt: VAVMKNWSIRQLDVNNIFLNGRLQEAVYMRQLTGYIDQSCPDYVCKLDKALYGLRQASRA
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| KYP50444.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] | 1.4e-189 | 40.02 | Show/hide |
Query: MSPAIAADVINFKTLREVWKALEEVYGDTSKACVNQFRGILQNTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSEYIPIVCAIDDKD
M+ +A +++ +T +++W+ + + G +++ + + T+KG +KM +YL MK+ +++L L G+ VS DLV+ LAGLD+EY PIV + DK+
Subjt: MSPAIAADVINFKTLREVWKALEEVYGDTSKACVNQFRGILQNTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSEYIPIVCAIDDKD
Query: LKTWQELSSILINFEGTLARYSTPTNAHFDLPDLATHLALNRQSMFDNQR-QFNPSNGNRGNDNNSGSYYGSGNGQMGNNPTQGTAMVEIEEEEVEGATI
TW E+ + L+ +E L + + +N L + + N ++ N+R + N G RG N G+ G G G+ T+ + ++ + A
Subjt: LKTWQELSSILINFEGTLARYSTPTNAHFDLPDLATHLALNRQSMFDNQR-QFNPSNGNRGNDNNSGSYYGSGNGQMGNNPTQGTAMVEIEEEEVEGATI
Query: FREEITTCYMRFEEHFNNLHASGNGSVQGNNSNNASSSAYIATPEILHDPKWLADSGATNHVT--------------------ANARNLAV------KMD
+ CY RF +++ ++ S + + N + +AY+A+P + D W DSGA+NHVT N NL + +D
Subjt: FREEITTCYMRFEEHFNNLHASGNGSVQGNNSNNASSSAYIATPEILHDPKWLADSGATNHVT--------------------ANARNLAV------KMD
Query: YNV----LNNILHVPEIRKNLISIASLTVDNNVVVEFHSNYCVVKDKASKKVMLHEILRNDLYQIELPSIQTPKSEIRSTSFAGLWHNRLGHASSKVIKS
L +IL+VP+I KNL+SI+ LT DN++ VEFH C VKDK + +++L +++ LYQ+ S T K S WH +LGH +SKV+
Subjt: YNV----LNNILHVPEIRKNLISIASLTVDNNVVVEFHSNYCVVKDKASKKVMLHEILRNDLYQIELPSIQTPKSEIRSTSFAGLWHNRLGHASSKVIKS
Query: VLKSCNVSTFLNESLHFCDACQKGKSHRLPFSRSVSHTWQPLELVHCDLWGPSPIVSIVGYKYYISFVDDFTRLAHIYPLKTKGEAFSSFSQYKLLVANR
V+K CN+ E+ FC+ACQ GK+H LPF SVS +PL+LVH D+WGP+PI S+ G+KYY+ F+DD++R IYPLK K + F +F Q++ LV N+
Subjt: VLKSCNVSTFLNESLHFCDACQKGKSHRLPFSRSVSHTWQPLELVHCDLWGPSPIVSIVGYKYYISFVDDFTRLAHIYPLKTKGEAFSSFSQYKLLVANR
Query: FEKKIKTLQTDWGGEFRSFTSFLRDNGIEFRHSCPHTSQQNGIVERKHRHIVEMGLTLLAQASMPLTYWWEAFSSAVYIINCLPTPILGDVSPWEQAFH-
F K+IKTLQ D GGEF+S + L GI+ R SCP+TS QNG ERKHRH+VE GLTLLAQA MPL YWWEAFS+AV++IN LPT ++ + SP++Q F
Subjt: FEKKIKTLQTDWGGEFRSFTSFLRDNGIEFRHSCPHTSQQNGIVERKHRHIVEMGLTLLAQASMPLTYWWEAFSSAVYIINCLPTPILGDVSPWEQAFH-
Query: --------------YPCLRLYQSHKFQHHSTKCVFLGYSLAHKGYKCLSSSGRLFISCHVVFNESEFPFKSELVPSSGPSNIALVPHHSSPVAEFQTSSP
YPCL+ Y HK Q H+TKCVFLGYS +HKGYKCL+S+GR+FIS HVVFNE FPF + + P+ I P +S + +
Subjt: --------------YPCLRLYQSHKFQHHSTKCVFLGYSLAHKGYKCLSSSGRLFISCHVVFNESEFPFKSELVPSSGPSNIALVPHHSSPVAEFQTSSP
Query: TLSTPPQDQYVSPQLSAHSPEGHSCPASVMPLYTSSMLPVDGSSDGSPELPLQISTALNSHPMQTRAKSGIFKQKDWGAFLVNSSFSPEVEPTSVKEALK
++ Q + + S+++ H + + + + ++ E ++ ++N H M TR+K GI K K V + E EP + EAL+
Subjt: TLSTPPQDQYVSPQLSAHSPEGHSCPASVMPLYTSSMLPVDGSSDGSPELPLQISTALNSHPMQTRAKSGIFKQKDWGAFLVNSSFSPEVEPTSVKEALK
Query: SSQWKAAMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFKVKRKSNSSFDRCKARLVAQGFNQVPGVDFHETFSPVVKAPTIQIILAVAVMKNWSIRQLD
+ +WK AM E L NKTWTLVP N+I KW+FK K K++ + +R KARLVA+GF Q G+D+ ETFSPV+KA T++IIL++AV NW IRQ+D
Subjt: SSQWKAAMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFKVKRKSNSSFDRCKARLVAQGFNQVPGVDFHETFSPVVKAPTIQIILAVAVMKNWSIRQLD
Query: VNNIFLNGRLQEAVYMRQLTGYIDQSCPDYVCKLDKALYGLRQASRA
+NN FLNG L+E V+MRQ G++D+S P ++CKL KA+YGL+QA R+
Subjt: VNNIFLNGRLQEAVYMRQLTGYIDQSCPDYVCKLDKALYGLRQASRA
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| PNX94503.1 putative retrotransposon Ty1-copia subclass protein, partial [Trifolium pratense] | 6.3e-201 | 39.79 | Show/hide |
Query: LSTVLTVKLDDKNYLLWKDMVLAILRGQKVDMYVLGTKAQPSELIETTTESGKMLLSNMLYEEWMTVDQALSGWLFGSMSPAIAADVINFKTLREVWKAL
L + ++VKLD N+ LWK +VL ++RG K D Y+LGTK P + + + + K+ N Y++W DQAL GWL SM+ IA V++ +T +++W
Subjt: LSTVLTVKLDDKNYLLWKDMVLAILRGQKVDMYVLGTKAQPSELIETTTESGKMLLSNMLYEEWMTVDQALSGWLFGSMSPAIAADVINFKTLREVWKAL
Query: EEVYGDTSKACVNQFRGILQNTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSEYIPIVCAIDDKDLKTWQELSSILINFEGTLARYS
+ + G +++ + + NT K MKM YLA MK ++ LKL G+P+S DL+ L GLDSEY P+V + D+ +W + + L+ FE L + +
Subjt: EEVYGDTSKACVNQFRGILQNTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSEYIPIVCAIDDKDLKTWQELSSILINFEGTLARYS
Query: TPTNAHFDLPDLATHLALNRQSMFDNQRQFNPSNGNRGNDNNSGSYYGSGNGQMGNNPTQGTAMVEIEEEEVEGATIFREEITTCYMRFEEHF--NNLHA
N + + + + A +S +F G RG+ N+ G G G +M P + F CY RF++ + N +A
Subjt: TPTNAHFDLPDLATHLALNRQSMFDNQRQFNPSNGNRGNDNNSGSYYGSGNGQMGNNPTQGTAMVEIEEEEVEGATIFREEITTCYMRFEEHF--NNLHA
Query: SGNGSVQGNNSNNASSSAYIATPEILHDPKWLADSGATNHVTANARNL--------------------------AVKMDYNVLNNILHVPEIRKNLISIA
G G S SA++A+P D +W DSGA+NHVT + L + K++ L N+L+VPEI KNL+S++
Subjt: SGNGSVQGNNSNNASSSAYIATPEILHDPKWLADSGATNHVTANARNL--------------------------AVKMDYNVLNNILHVPEIRKNLISIA
Query: SLTVDNNVVVEFHSNYCVVKDKASKKVMLHEILRNDLYQI----ELPSIQTPKSEIRSTSFAGLWHNRLGHASSKVIKSVLKSCNVSTFLNESLHFCDAC
LT+DNN +VEF NYC VKDK + K +L L++ LYQ+ E P+ + P + I S +WH +LGH ++KV++ VLK NV ++ FC+AC
Subjt: SLTVDNNVVVEFHSNYCVVKDKASKKVMLHEILRNDLYQI----ELPSIQTPKSEIRSTSFAGLWHNRLGHASSKVIKSVLKSCNVSTFLNESLHFCDAC
Query: QKGKSHRLPFSRSVSHTWQPLELVHCDLWGPSPIVSIVGYKYYISFVDDFTRLAHIYPLKTKGEAFSSFSQYKLLVANRFEKKIKTLQTDWGGEFRSFTS
Q GK H LPF S SH +PL+L+H D+WGP+PI+S +KYY+ F+DDF+R I+PLK K E +F+Q+K LV N+F KKIK ++ D GGE++
Subjt: QKGKSHRLPFSRSVSHTWQPLELVHCDLWGPSPIVSIVGYKYYISFVDDFTRLAHIYPLKTKGEAFSSFSQYKLLVANRFEKKIKTLQTDWGGEFRSFTS
Query: FLRDNGIEFRHSCPHTSQQNGIVERKHRHIVEMGLTLLAQASMPLTYWWEAFSSAVYIINCLPTPILGDVSPWEQAFH---------------YPCLRLY
D+GI+F+ SCP+TSQQNG ERKHRH+ E+GLTLLAQA MPL+YWWEAFS+AVY+IN LP+ + + SP+ F YPCL+ Y
Subjt: FLRDNGIEFRHSCPHTSQQNGIVERKHRHIVEMGLTLLAQASMPLTYWWEAFSSAVYIINCLPTPILGDVSPWEQAFH---------------YPCLRLY
Query: QSHKFQHHSTKCVFLGYSLAHKGYKCLSSSGRLFISCHVVFNESEFPFKSELVPSSGPSNIAL------VPHHSSPVAEFQTSSPTLSTPPQ--------
HK Q H+T+CVFLGYS +HKGYKC++S GR+F+S HVVFNE+ FPF+ + + P + P + + T+ T + Q
Subjt: QSHKFQHHSTKCVFLGYSLAHKGYKCLSSSGRLFISCHVVFNESEFPFKSELVPSSGPSNIAL------VPHHSSPVAEFQTSSPTLSTPPQ--------
Query: ----DQYVSPQLSAHSPEGH----SCPASVMPLYTSSMLPVDGSSDGSPELPLQISTALNSHPMQTRAKSGIFKQKDWGAFLVNSSFSPEVEPTSVKEAL
DQ V H+ E + S SM + + P Q T N+H M+TR+K+G++K K L + + EP SV EAL
Subjt: ----DQYVSPQLSAHSPEGH----SCPASVMPLYTSSMLPVDGSSDGSPELPLQISTALNSHPMQTRAKSGIFKQKDWGAFLVNSSFSPEVEPTSVKEAL
Query: KSSQWKAAMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFKVKRKSNSSFDRCKARLVAQGFNQVPGVDFHETFSPVVKAPTIQIILAVAVMKNWSIRQL
+W AM+ E L NKTWTLVP N+I SKWIFK K K++ + +R KARLVA+GF Q GVD+ ETFSPVVK+ T++IIL++AV +W +RQL
Subjt: KSSQWKAAMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFKVKRKSNSSFDRCKARLVAQGFNQVPGVDFHETFSPVVKAPTIQIILAVAVMKNWSIRQL
Query: DVNNIFLNGRLQEAVYMRQLTGYIDQSCPDYVCKLDKALYGLRQASRA
D+NN FLNG L+E+V+M Q GYIDQ+ P ++C+L+KA+YGL+QA RA
Subjt: DVNNIFLNGRLQEAVYMRQLTGYIDQSCPDYVCKLDKALYGLRQASRA
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| PNY01489.1 copia-like polyprotein, partial [Trifolium pratense] | 1.1e-192 | 39.58 | Show/hide |
Query: SSATNIISSSLGHPLSTVLTVKLDDKNYLLWKDMVLAILRGQKVDMYVLGTKAQPSELIETTTESGKMLLSNMLYEEWMTVDQALSGWLFGSMSPAIAAD
SSA N S+ + L ++++VKLD NY LWK +VL ++RG K D Y+LGTK P + + + +S K+ N +++WM DQAL GWL SM+ IA
Subjt: SSATNIISSSLGHPLSTVLTVKLDDKNYLLWKDMVLAILRGQKVDMYVLGTKAQPSELIETTTESGKMLLSNMLYEEWMTVDQALSGWLFGSMSPAIAAD
Query: VINFKTLREVWKALEEVYGDTSKACVNQFRGILQNTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSEYIPIVCAIDDKDLKTWQELS
+++ +T +++W + + G +K+ + + NT+KG MKM +YL MK S+ LKL G+P+S DL+ L GLD+EY P+V + D+ +W ++
Subjt: VINFKTLREVWKALEEVYGDTSKACVNQFRGILQNTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSEYIPIVCAIDDKDLKTWQELS
Query: SILINFEGTLARYSTPTNAHFDLPDLATHLALNRQSMFDNQRQFN----PSNGNRGNDNNSGSYYGSGNGQMGNNPTQ---GTAMVEIEEEEVEGATIFR
+ L+ FE L D + + L LN + F N+ +F S GN N G G G G+M N Q GT ++
Subjt: SILINFEGTLARYSTPTNAHFDLPDLATHLALNRQSMFDNQRQFN----PSNGNRGNDNNSGSYYGSGNGQMGNNPTQ---GTAMVEIEEEEVEGATIFR
Query: EEITTCYMRFEEHFNNLHASGNGSVQGNNSNNASSSAYIATPEILHDPKWLADSGATNHVT--------------------ANARNLAV------KMDYN
C RF+ + + S QG S SA++A+P D +W DSGA+NHVT N L + K++
Subjt: EEITTCYMRFEEHFNNLHASGNGSVQGNNSNNASSSAYIATPEILHDPKWLADSGATNHVT--------------------ANARNLAV------KMDYN
Query: VLNNILHVPEIRKNLISIASLTVDNNVVVEFHSNYCVVKDKASKKVMLHEILRNDLYQIELPSIQTPKSEIRSTSFAGLWHNRLGHASSKVIKSVLKSCN
L+++L+VP+I KNL+S++ LT DNN+ VEF +N C VKDK + + +L L++ LYQ+ S Q+ K S WH +LGH ++KV++ VLK CN
Subjt: VLNNILHVPEIRKNLISIASLTVDNNVVVEFHSNYCVVKDKASKKVMLHEILRNDLYQIELPSIQTPKSEIRSTSFAGLWHNRLGHASSKVIKSVLKSCN
Query: VSTFLNESLHFCDACQKGKSHRLPFSRSVSHTWQPLELVHCDLWGPSPIVSIVGYKYYISFVDDFTRLAHIYPLKTKGEAFSSFSQYKLLVANRFEKKIK
V ++ FC+ACQ GK H LPF S SH +PL L+H D+WGP+PI+S G+KYY+ F+DDF+R I+PLK K + +F Q+K L N+F KKIK
Subjt: VSTFLNESLHFCDACQKGKSHRLPFSRSVSHTWQPLELVHCDLWGPSPIVSIVGYKYYISFVDDFTRLAHIYPLKTKGEAFSSFSQYKLLVANRFEKKIK
Query: TLQTDWGGEFRSFTSFLRDNGIEFRHSCPHTSQQNGIVERKHRHIVEMGLTLLAQASMPLTYWWEAFSSAVYIINCLPTPILGDVSPWEQAFH-------
+Q D GGE+++ + GI+FR SCP+TSQQNG ERKHRH+VE+GLTLLAQA MPL YWWEAFS+AVY+IN L + + + SP+ F
Subjt: TLQTDWGGEFRSFTSFLRDNGIEFRHSCPHTSQQNGIVERKHRHIVEMGLTLLAQASMPLTYWWEAFSSAVYIINCLPTPILGDVSPWEQAFH-------
Query: --------YPCLRLYQSHKFQHHSTKCVFLGYSLAHKGYKCLSSSGRLFISCHVVFNESEFPFKSELVPSSGPSNIALVPHHSSPVAEFQTSSPTLSTPP
YPCL+ Y HK Q H+T+CVF+GYS +HKG + G S + + N+ + + S+ S+ H + + T++ +
Subjt: --------YPCLRLYQSHKFQHHSTKCVFLGYSLAHKGYKCLSSSGRLFISCHVVFNESEFPFKSELVPSSGPSNIALVPHHSSPVAEFQTSSPTLSTPP
Query: QDQYVSPQLSAHSPEGHSCPASVMPLYTSSMLPVDGSSDGSPELPLQISTALNSHPMQTRAKSGIFKQKDWGAFLVNSSFSPEVEPTSVKEALKSSQWKA
D +V + +SP + G+S Q +T N+H ++TR+K+GI K K + + S E EP SVKEAL WK
Subjt: QDQYVSPQLSAHSPEGHSCPASVMPLYTSSMLPVDGSSDGSPELPLQISTALNSHPMQTRAKSGIFKQKDWGAFLVNSSFSPEVEPTSVKEALKSSQWKA
Query: AMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFKVKRKSNSSFDRCKARLVAQGFNQVPGVDFHETFSPVVKAPTIQIILAVAVMKNWSIRQLDVNNIFL
AM+ E L N TWTLVP N+I SKWIFK K KS+ S +R KARLVA+GF Q G+DFHETFSPVVK+ T++IIL +AV NW +RQLD+NN FL
Subjt: AMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFKVKRKSNSSFDRCKARLVAQGFNQVPGVDFHETFSPVVKAPTIQIILAVAVMKNWSIRQLDVNNIFL
Query: NGRLQEAVYMRQLTGYIDQSCPDYVCKLDKALYGLRQASRA
NG+L+E V+M Q GYID + P+++CKL KA+YGL+QA RA
Subjt: NGRLQEAVYMRQLTGYIDQSCPDYVCKLDKALYGLRQASRA
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2K3MUJ9 Putative retrotransposon Ty1-copia subclass protein (Fragment) | 3.0e-201 | 39.79 | Show/hide |
Query: LSTVLTVKLDDKNYLLWKDMVLAILRGQKVDMYVLGTKAQPSELIETTTESGKMLLSNMLYEEWMTVDQALSGWLFGSMSPAIAADVINFKTLREVWKAL
L + ++VKLD N+ LWK +VL ++RG K D Y+LGTK P + + + + K+ N Y++W DQAL GWL SM+ IA V++ +T +++W
Subjt: LSTVLTVKLDDKNYLLWKDMVLAILRGQKVDMYVLGTKAQPSELIETTTESGKMLLSNMLYEEWMTVDQALSGWLFGSMSPAIAADVINFKTLREVWKAL
Query: EEVYGDTSKACVNQFRGILQNTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSEYIPIVCAIDDKDLKTWQELSSILINFEGTLARYS
+ + G +++ + + NT K MKM YLA MK ++ LKL G+P+S DL+ L GLDSEY P+V + D+ +W + + L+ FE L + +
Subjt: EEVYGDTSKACVNQFRGILQNTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSEYIPIVCAIDDKDLKTWQELSSILINFEGTLARYS
Query: TPTNAHFDLPDLATHLALNRQSMFDNQRQFNPSNGNRGNDNNSGSYYGSGNGQMGNNPTQGTAMVEIEEEEVEGATIFREEITTCYMRFEEHF--NNLHA
N + + + + A +S +F G RG+ N+ G G G +M P + F CY RF++ + N +A
Subjt: TPTNAHFDLPDLATHLALNRQSMFDNQRQFNPSNGNRGNDNNSGSYYGSGNGQMGNNPTQGTAMVEIEEEEVEGATIFREEITTCYMRFEEHF--NNLHA
Query: SGNGSVQGNNSNNASSSAYIATPEILHDPKWLADSGATNHVTANARNL--------------------------AVKMDYNVLNNILHVPEIRKNLISIA
G G S SA++A+P D +W DSGA+NHVT + L + K++ L N+L+VPEI KNL+S++
Subjt: SGNGSVQGNNSNNASSSAYIATPEILHDPKWLADSGATNHVTANARNL--------------------------AVKMDYNVLNNILHVPEIRKNLISIA
Query: SLTVDNNVVVEFHSNYCVVKDKASKKVMLHEILRNDLYQI----ELPSIQTPKSEIRSTSFAGLWHNRLGHASSKVIKSVLKSCNVSTFLNESLHFCDAC
LT+DNN +VEF NYC VKDK + K +L L++ LYQ+ E P+ + P + I S +WH +LGH ++KV++ VLK NV ++ FC+AC
Subjt: SLTVDNNVVVEFHSNYCVVKDKASKKVMLHEILRNDLYQI----ELPSIQTPKSEIRSTSFAGLWHNRLGHASSKVIKSVLKSCNVSTFLNESLHFCDAC
Query: QKGKSHRLPFSRSVSHTWQPLELVHCDLWGPSPIVSIVGYKYYISFVDDFTRLAHIYPLKTKGEAFSSFSQYKLLVANRFEKKIKTLQTDWGGEFRSFTS
Q GK H LPF S SH +PL+L+H D+WGP+PI+S +KYY+ F+DDF+R I+PLK K E +F+Q+K LV N+F KKIK ++ D GGE++
Subjt: QKGKSHRLPFSRSVSHTWQPLELVHCDLWGPSPIVSIVGYKYYISFVDDFTRLAHIYPLKTKGEAFSSFSQYKLLVANRFEKKIKTLQTDWGGEFRSFTS
Query: FLRDNGIEFRHSCPHTSQQNGIVERKHRHIVEMGLTLLAQASMPLTYWWEAFSSAVYIINCLPTPILGDVSPWEQAFH---------------YPCLRLY
D+GI+F+ SCP+TSQQNG ERKHRH+ E+GLTLLAQA MPL+YWWEAFS+AVY+IN LP+ + + SP+ F YPCL+ Y
Subjt: FLRDNGIEFRHSCPHTSQQNGIVERKHRHIVEMGLTLLAQASMPLTYWWEAFSSAVYIINCLPTPILGDVSPWEQAFH---------------YPCLRLY
Query: QSHKFQHHSTKCVFLGYSLAHKGYKCLSSSGRLFISCHVVFNESEFPFKSELVPSSGPSNIAL------VPHHSSPVAEFQTSSPTLSTPPQ--------
HK Q H+T+CVFLGYS +HKGYKC++S GR+F+S HVVFNE+ FPF+ + + P + P + + T+ T + Q
Subjt: QSHKFQHHSTKCVFLGYSLAHKGYKCLSSSGRLFISCHVVFNESEFPFKSELVPSSGPSNIAL------VPHHSSPVAEFQTSSPTLSTPPQ--------
Query: ----DQYVSPQLSAHSPEGH----SCPASVMPLYTSSMLPVDGSSDGSPELPLQISTALNSHPMQTRAKSGIFKQKDWGAFLVNSSFSPEVEPTSVKEAL
DQ V H+ E + S SM + + P Q T N+H M+TR+K+G++K K L + + EP SV EAL
Subjt: ----DQYVSPQLSAHSPEGH----SCPASVMPLYTSSMLPVDGSSDGSPELPLQISTALNSHPMQTRAKSGIFKQKDWGAFLVNSSFSPEVEPTSVKEAL
Query: KSSQWKAAMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFKVKRKSNSSFDRCKARLVAQGFNQVPGVDFHETFSPVVKAPTIQIILAVAVMKNWSIRQL
+W AM+ E L NKTWTLVP N+I SKWIFK K K++ + +R KARLVA+GF Q GVD+ ETFSPVVK+ T++IIL++AV +W +RQL
Subjt: KSSQWKAAMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFKVKRKSNSSFDRCKARLVAQGFNQVPGVDFHETFSPVVKAPTIQIILAVAVMKNWSIRQL
Query: DVNNIFLNGRLQEAVYMRQLTGYIDQSCPDYVCKLDKALYGLRQASRA
D+NN FLNG L+E+V+M Q GYIDQ+ P ++C+L+KA+YGL+QA RA
Subjt: DVNNIFLNGRLQEAVYMRQLTGYIDQSCPDYVCKLDKALYGLRQASRA
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| A0A2K3NEN7 Copia-like polyprotein (Fragment) | 5.2e-193 | 39.58 | Show/hide |
Query: SSATNIISSSLGHPLSTVLTVKLDDKNYLLWKDMVLAILRGQKVDMYVLGTKAQPSELIETTTESGKMLLSNMLYEEWMTVDQALSGWLFGSMSPAIAAD
SSA N S+ + L ++++VKLD NY LWK +VL ++RG K D Y+LGTK P + + + +S K+ N +++WM DQAL GWL SM+ IA
Subjt: SSATNIISSSLGHPLSTVLTVKLDDKNYLLWKDMVLAILRGQKVDMYVLGTKAQPSELIETTTESGKMLLSNMLYEEWMTVDQALSGWLFGSMSPAIAAD
Query: VINFKTLREVWKALEEVYGDTSKACVNQFRGILQNTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSEYIPIVCAIDDKDLKTWQELS
+++ +T +++W + + G +K+ + + NT+KG MKM +YL MK S+ LKL G+P+S DL+ L GLD+EY P+V + D+ +W ++
Subjt: VINFKTLREVWKALEEVYGDTSKACVNQFRGILQNTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSEYIPIVCAIDDKDLKTWQELS
Query: SILINFEGTLARYSTPTNAHFDLPDLATHLALNRQSMFDNQRQFN----PSNGNRGNDNNSGSYYGSGNGQMGNNPTQ---GTAMVEIEEEEVEGATIFR
+ L+ FE L D + + L LN + F N+ +F S GN N G G G G+M N Q GT ++
Subjt: SILINFEGTLARYSTPTNAHFDLPDLATHLALNRQSMFDNQRQFN----PSNGNRGNDNNSGSYYGSGNGQMGNNPTQ---GTAMVEIEEEEVEGATIFR
Query: EEITTCYMRFEEHFNNLHASGNGSVQGNNSNNASSSAYIATPEILHDPKWLADSGATNHVT--------------------ANARNLAV------KMDYN
C RF+ + + S QG S SA++A+P D +W DSGA+NHVT N L + K++
Subjt: EEITTCYMRFEEHFNNLHASGNGSVQGNNSNNASSSAYIATPEILHDPKWLADSGATNHVT--------------------ANARNLAV------KMDYN
Query: VLNNILHVPEIRKNLISIASLTVDNNVVVEFHSNYCVVKDKASKKVMLHEILRNDLYQIELPSIQTPKSEIRSTSFAGLWHNRLGHASSKVIKSVLKSCN
L+++L+VP+I KNL+S++ LT DNN+ VEF +N C VKDK + + +L L++ LYQ+ S Q+ K S WH +LGH ++KV++ VLK CN
Subjt: VLNNILHVPEIRKNLISIASLTVDNNVVVEFHSNYCVVKDKASKKVMLHEILRNDLYQIELPSIQTPKSEIRSTSFAGLWHNRLGHASSKVIKSVLKSCN
Query: VSTFLNESLHFCDACQKGKSHRLPFSRSVSHTWQPLELVHCDLWGPSPIVSIVGYKYYISFVDDFTRLAHIYPLKTKGEAFSSFSQYKLLVANRFEKKIK
V ++ FC+ACQ GK H LPF S SH +PL L+H D+WGP+PI+S G+KYY+ F+DDF+R I+PLK K + +F Q+K L N+F KKIK
Subjt: VSTFLNESLHFCDACQKGKSHRLPFSRSVSHTWQPLELVHCDLWGPSPIVSIVGYKYYISFVDDFTRLAHIYPLKTKGEAFSSFSQYKLLVANRFEKKIK
Query: TLQTDWGGEFRSFTSFLRDNGIEFRHSCPHTSQQNGIVERKHRHIVEMGLTLLAQASMPLTYWWEAFSSAVYIINCLPTPILGDVSPWEQAFH-------
+Q D GGE+++ + GI+FR SCP+TSQQNG ERKHRH+VE+GLTLLAQA MPL YWWEAFS+AVY+IN L + + + SP+ F
Subjt: TLQTDWGGEFRSFTSFLRDNGIEFRHSCPHTSQQNGIVERKHRHIVEMGLTLLAQASMPLTYWWEAFSSAVYIINCLPTPILGDVSPWEQAFH-------
Query: --------YPCLRLYQSHKFQHHSTKCVFLGYSLAHKGYKCLSSSGRLFISCHVVFNESEFPFKSELVPSSGPSNIALVPHHSSPVAEFQTSSPTLSTPP
YPCL+ Y HK Q H+T+CVF+GYS +HKG + G S + + N+ + + S+ S+ H + + T++ +
Subjt: --------YPCLRLYQSHKFQHHSTKCVFLGYSLAHKGYKCLSSSGRLFISCHVVFNESEFPFKSELVPSSGPSNIALVPHHSSPVAEFQTSSPTLSTPP
Query: QDQYVSPQLSAHSPEGHSCPASVMPLYTSSMLPVDGSSDGSPELPLQISTALNSHPMQTRAKSGIFKQKDWGAFLVNSSFSPEVEPTSVKEALKSSQWKA
D +V + +SP + G+S Q +T N+H ++TR+K+GI K K + + S E EP SVKEAL WK
Subjt: QDQYVSPQLSAHSPEGHSCPASVMPLYTSSMLPVDGSSDGSPELPLQISTALNSHPMQTRAKSGIFKQKDWGAFLVNSSFSPEVEPTSVKEALKSSQWKA
Query: AMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFKVKRKSNSSFDRCKARLVAQGFNQVPGVDFHETFSPVVKAPTIQIILAVAVMKNWSIRQLDVNNIFL
AM+ E L N TWTLVP N+I SKWIFK K KS+ S +R KARLVA+GF Q G+DFHETFSPVVK+ T++IIL +AV NW +RQLD+NN FL
Subjt: AMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFKVKRKSNSSFDRCKARLVAQGFNQVPGVDFHETFSPVVKAPTIQIILAVAVMKNWSIRQLDVNNIFL
Query: NGRLQEAVYMRQLTGYIDQSCPDYVCKLDKALYGLRQASRA
NG+L+E V+M Q GYID + P+++CKL KA+YGL+QA RA
Subjt: NGRLQEAVYMRQLTGYIDQSCPDYVCKLDKALYGLRQASRA
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| A0A2Z6MBG6 Integrase catalytic domain-containing protein | 1.7e-204 | 39.56 | Show/hide |
Query: AVAASSSATNIISSSLGHPLSTVLTVKLDDKNYLLWKDMVLAILRGQKVDMYVLGTKAQPSELIETTTESGKMLLSNMLYEEWMTVDQALSGWLFGSMSP
A AA S+ N + SS ++VKLD NY LWK +VL ++RG K+D Y+LGT+ P E I T+++S K N + EW DQ L GW+ SM+
Subjt: AVAASSSATNIISSSLGHPLSTVLTVKLDDKNYLLWKDMVLAILRGQKVDMYVLGTKAQPSELIETTTESGKMLLSNMLYEEWMTVDQALSGWLFGSMSP
Query: AIAADVINFKTLREVWKALEEVYGDTSKACVNQFRGILQNTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSEYIPIVCAIDDKDLKT
IA +++ +T +++W + + G +++ + + + +KG MKM DYL MK + LKL GNPVS DL+ L GLDSEY P+V + D+ +
Subjt: AIAADVINFKTLREVWKALEEVYGDTSKACVNQFRGILQNTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSEYIPIVCAIDDKDLKT
Query: WQELSSILINFEGTLARYSTPTNAHFDLPDLATHLALNRQSMFDNQRQFNPSNGNRGNDNNSGSYYGSGNGQMGNNPTQGTAMVEIEEEEVEGATIFREE
W +L + L+ FE + + + TN + AT NR + + SN N N+ G G G G+ G NP Q +
Subjt: WQELSSILINFEGTLARYSTPTNAHFDLPDLATHLALNRQSMFDNQRQFNPSNGNRGNDNNSGSYYGSGNGQMGNNPTQGTAMVEIEEEEVEGATIFREE
Query: ITTCYMRFEEHFNNLHASGNGSVQGNNSNNASSSAYIATPEILHDPKWLADSGATNHVT--------------------ANARNLAV------KMDYNVL
C+ RF++ ++ + S QG S +A++A+ + D W DSGA+NHVT N LA+ K+ L
Subjt: ITTCYMRFEEHFNNLHASGNGSVQGNNSNNASSSAYIATPEILHDPKWLADSGATNHVT--------------------ANARNLAV------KMDYNVL
Query: NNILHVPEIRKNLISIASLTVDNNVVVEFHSNYCVVKDKASKKVMLHEILRNDLYQIELPSIQTPKSEIRSTSFAGLWHNRLGHASSKVIKSVLKSCNVS
++IL+VP I KNL+S++ L DNN++VEF N C VKDK + KV+L +L++ LYQ+ T ++ S WH RLGH ++KV+ VL+SC V
Subjt: NNILHVPEIRKNLISIASLTVDNNVVVEFHSNYCVVKDKASKKVMLHEILRNDLYQIELPSIQTPKSEIRSTSFAGLWHNRLGHASSKVIKSVLKSCNVS
Query: TFLNESLHFCDACQKGKSHRLPFSRSVSHTWQPLELVHCDLWGPSPIVSIVGYKYYISFVDDFTRLAHIYPLKTKGEAFSSFSQYKLLVANRFEKKIKTL
+++ FC+ACQ GK H LPF S SH +PLELVH D+WGP+PI++ G+KYY+ FVDDF+R IYPLK K E +F Q+K L N+F K+IK +
Subjt: TFLNESLHFCDACQKGKSHRLPFSRSVSHTWQPLELVHCDLWGPSPIVSIVGYKYYISFVDDFTRLAHIYPLKTKGEAFSSFSQYKLLVANRFEKKIKTL
Query: QTDWGGEFRSFTSFLRDNGIEFRHSCPHTSQQNGIVERKHRHIVEMGLTLLAQASMPLTYWWEAFSSAVYIINCLPTPILGDVSPWEQAFH---------
Q D GGE++ + GI+FR SCP+TSQQNG ERKHRHI E GLTLLAQA MPL YWWEAFS+AVY+IN LP+ + + SP+
Subjt: QTDWGGEFRSFTSFLRDNGIEFRHSCPHTSQQNGIVERKHRHIVEMGLTLLAQASMPLTYWWEAFSSAVYIINCLPTPILGDVSPWEQAFH---------
Query: ------YPCLRLYQSHKFQHHSTKCVFLGYSLAHKGYKCLSSSGRLFISCHVVFNESEFPFKSELVPSSGPSNIAL---------------VPHHSSPVA
YPCL+ Y HK Q+H+T+CVFLGYS +HKGYKCL+S GR+FIS HV+FNE FPF + + P + + S P+
Subjt: ------YPCLRLYQSHKFQHHSTKCVFLGYSLAHKGYKCLSSSGRLFISCHVVFNESEFPFKSELVPSSGPSNIAL---------------VPHHSSPVA
Query: EFQTSSPTLSTPPQDQYVSPQLSAHSPEGHSCPASVMPLYTSSMLPVDGSSDGSPELPLQISTALNSHPMQTRAKSGIFKQKDWGAFLVNSSFSPEVEPT
E + + T + QD +++ + + ++ P+ + ++ S G SH + TR+KSGI K K + ++ +EP
Subjt: EFQTSSPTLSTPPQDQYVSPQLSAHSPEGHSCPASVMPLYTSSMLPVDGSSDGSPELPLQISTALNSHPMQTRAKSGIFKQKDWGAFLVNSSFSPEVEPT
Query: SVKEALKSSQWKAAMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFKVKRKSNSSFDRCKARLVAQGFNQVPGVDFHETFSPVVKAPTIQIILAVAVMKN
+ KEAL WK AM E L NKTW LVP N++ SKW+FK K K + S +R KARLVA+GF Q G+D+ ETFSPV+KA T++IIL++AV N
Subjt: SVKEALKSSQWKAAMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFKVKRKSNSSFDRCKARLVAQGFNQVPGVDFHETFSPVVKAPTIQIILAVAVMKN
Query: WSIRQLDVNNIFLNGRLQEAVYMRQLTGYIDQSCPDYVCKLDKALYGLRQASRA
W +RQLD+NN FLNG L+E V+M Q G++D + P+++CKL KA+YGL+QA RA
Subjt: WSIRQLDVNNIFLNGRLQEAVYMRQLTGYIDQSCPDYVCKLDKALYGLRQASRA
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| A0A2Z6P4D5 Integrase catalytic domain-containing protein | 2.7e-205 | 39.81 | Show/hide |
Query: SSATNIISSSLGHPLSTVLTVKLDDKNYLLWKDMVLAILRGQKVDMYVLGTKAQPSELIETTTESGKMLLSNMLYEEWMTVDQALSGWLFGSMSPAIAAD
SSA N S + L ++++VKLD NY LWK +VL+++RG K+D Y+LGT P + + + +S K+ N + +W+ DQAL GWL SM+ IA
Subjt: SSATNIISSSLGHPLSTVLTVKLDDKNYLLWKDMVLAILRGQKVDMYVLGTKAQPSELIETTTESGKMLLSNMLYEEWMTVDQALSGWLFGSMSPAIAAD
Query: VINFKTLREVWKALEEVYGDTSKACVNQFRGILQNTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSEYIPIVCAIDDKDLKTWQELS
+++ +T +++W + + G +K+ + + NT+KG MKM +YL MK S+ LKL G+P+S DL+ L GLD+EY P+V + D+ +W ++
Subjt: VINFKTLREVWKALEEVYGDTSKACVNQFRGILQNTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSEYIPIVCAIDDKDLKTWQELS
Query: SILINFEGTLARYSTPTNAHFDLPDLATHLALNRQSMFDNQRQFN----PSNGNRGNDNNSGSYYGSGNGQMGNNPTQ---GTAMVEIEEEEVEGATIFR
+ L+ FE L +++ + L LN + F N+ +F S GN N G G G G+M N Q GT + ++
Subjt: SILINFEGTLARYSTPTNAHFDLPDLATHLALNRQSMFDNQRQFN----PSNGNRGNDNNSGSYYGSGNGQMGNNPTQ---GTAMVEIEEEEVEGATIFR
Query: EEITTCYMRFEEHFNNLHASGNGSVQGNNSNNASSSAYIATPEILHDPKWLADSGATNHVT--------------------ANARNLAV------KMDYN
C RF+ + + S QG S SA+IA+P D +W DSGA NHVT N L + K++
Subjt: EEITTCYMRFEEHFNNLHASGNGSVQGNNSNNASSSAYIATPEILHDPKWLADSGATNHVT--------------------ANARNLAV------KMDYN
Query: VLNNILHVPEIRKNLISIASLTVDNNVVVEFHSNYCVVKDKASKKVMLHEILRNDLYQIELPSIQTPKSEIRSTSFAGLWHNRLGHASSKVIKSVLKSCN
L+++L+VP+I KNL+S++ LT DNN++VEF +N C VKDK + + +L L++ LYQ+ + K S WH +LGH ++KV+ VLK CN
Subjt: VLNNILHVPEIRKNLISIASLTVDNNVVVEFHSNYCVVKDKASKKVMLHEILRNDLYQIELPSIQTPKSEIRSTSFAGLWHNRLGHASSKVIKSVLKSCN
Query: VSTFLNESLHFCDACQKGKSHRLPFSRSVSHTWQPLELVHCDLWGPSPIVSIVGYKYYISFVDDFTRLAHIYPLKTKGEAFSSFSQYKLLVANRFEKKIK
V ++ FC+ACQ GK H LPF S SH +PL L+H D+WGP+PI+S G+KYY+ F+DDF+R I+PLK K + +F Q+K L N+F KKIK
Subjt: VSTFLNESLHFCDACQKGKSHRLPFSRSVSHTWQPLELVHCDLWGPSPIVSIVGYKYYISFVDDFTRLAHIYPLKTKGEAFSSFSQYKLLVANRFEKKIK
Query: TLQTDWGGEFRSFTSFLRDNGIEFRHSCPHTSQQNGIVERKHRHIVEMGLTLLAQASMPLTYWWEAFSSAVYIINCLPTPILGDVSPWEQAFH-------
+Q D GGE+++ + GI+FR SCP+TSQQNG ERKHRH+ E+GLTLLAQA MPL YWWEAFS+AVY+IN LP+ + + SP+ F
Subjt: TLQTDWGGEFRSFTSFLRDNGIEFRHSCPHTSQQNGIVERKHRHIVEMGLTLLAQASMPLTYWWEAFSSAVYIINCLPTPILGDVSPWEQAFH-------
Query: --------YPCLRLYQSHKFQHHSTKCVFLGYSLAHKGYKCLSSSGRLFISCHVVFNESEFPFKSELVPSSGP------SNIALVPHHSSPVAEFQTSSP
YPCL+ Y HK Q H+T+CVF+GYS +HKGYKC++S GR+F+S HV+FNE+ FPF + + P ++ L+P S+ P
Subjt: --------YPCLRLYQSHKFQHHSTKCVFLGYSLAHKGYKCLSSSGRLFISCHVVFNESEFPFKSELVPSSGP------SNIALVPHHSSPVAEFQTSSP
Query: TLSTPPQDQYVSPQLSAHSPEGHSCPASVMPLYTSSMLPVDGSSDGSPELPLQISTAL-------------NSHPMQTRAKSGIFKQKDWGAFLVNSSFS
+T S + S ++ +S + T++ D +D S + + ++ + N+H M+TR+K GI K K + + S
Subjt: TLSTPPQDQYVSPQLSAHSPEGHSCPASVMPLYTSSMLPVDGSSDGSPELPLQISTAL-------------NSHPMQTRAKSGIFKQKDWGAFLVNSSFS
Query: PEVEPTSVKEALKSSQWKAAMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFKVKRKSNSSFDRCKARLVAQGFNQVPGVDFHETFSPVVKAPTIQIILA
E EP SVKEAL WK AM+ E L N TWTLVP N+I SKWIFK K KS+ S +R KARLVA+GF Q G+DF ETFSPVVK+ T++IIL
Subjt: PEVEPTSVKEALKSSQWKAAMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFKVKRKSNSSFDRCKARLVAQGFNQVPGVDFHETFSPVVKAPTIQIILA
Query: VAVMKNWSIRQLDVNNIFLNGRLQEAVYMRQLTGYIDQSCPDYVCKLDKALYGLRQASRA
+AV NW +RQLD+NN FLNG+L+E V+M Q GYID + P+++CKL KA+YGL+QA RA
Subjt: VAVMKNWSIRQLDVNNIFLNGRLQEAVYMRQLTGYIDQSCPDYVCKLDKALYGLRQASRA
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| A0A803PM38 Uncharacterized protein | 8.8e-209 | 41.55 | Show/hide |
Query: ATNIISSSLGHPLSTVLTVKLDDKNYLLWKDMVLAILRGQKVDMYVLGTKAQPSELIETTTESGKML---LSNMLYEEWMTVDQALSGWLFGSMSPAIAA
A NI+ G L+ +KLD N+ LW+ MV AI+RG ++D Y+ GT +P E + +T G + N +E+W+ DQ L GWL+GSM+ IA
Subjt: ATNIISSSLGHPLSTVLTVKLDDKNYLLWKDMVLAILRGQKVDMYVLGTKAQPSELIETTTESGKML---LSNMLYEEWMTVDQALSGWLFGSMSPAIAA
Query: DVINFKTLREVWKALEEVYGDTSKACVNQFRGILQNTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSEYIPIVCAIDDKDLKTWQEL
+V+ + +W ALEE++G SKA ++++R +Q +KG++ M DYL +Q ++ L L G P + LVS VL+GLD EY+P+V I+ + TWQ+L
Subjt: DVINFKTLREVWKALEEVYGDTSKACVNQFRGILQNTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSEYIPIVCAIDDKDLKTWQEL
Query: SSILINFEGTLARYSTPTNAHFDLPDLATHLALNRQSMFDNQRQFNPSNGNRGNDNNSGSYYGSGNGQMGNNPTQGTAMVEIEEEEVEGATIF-REEITT
+L++ + + R + F T + +N + N+ +N N+NN G G N + NN ++G G T R
Subjt: SSILINFEGTLARYSTPTNAHFDLPDLATHLALNRQSMFDNQRQFNPSNGNRGNDNNSGSYYGSGNGQMGNNPTQGTAMVEIEEEEVEGATIF-REEITT
Query: C--YMRFEEHFNNLHASGNGSVQGNNSN-----NASSSAYIATPEILHDPKWLADSGATNHVTANARNLAVKMDYNVLNNILHVPEIRKNLISIASLTVD
C Y H N AS + + + N N N +A L + G + T +A L +L ILHVP I KNL+SI+ LT D
Subjt: C--YMRFEEHFNNLHASGNGSVQGNNSN-----NASSSAYIATPEILHDPKWLADSGATNHVTANARNLAVKMDYNVLNNILHVPEIRKNLISIASLTVD
Query: NNVVVEFHSNYCVVKDKASKKVMLHEILRNDLYQIELPSIQTPKSEIRS----TSFAGL------------------------WHNRLGHASSKVIKSVL
NNV VEF S+ C VKDK + +V+L L++ LYQ + P+ T S RS TSF+GL WH RLGH S +V+ +VL
Subjt: NNVVVEFHSNYCVVKDKASKKVMLHEILRNDLYQIELPSIQTPKSEIRS----TSFAGL------------------------WHNRLGHASSKVIKSVL
Query: KSCNVSTFLNESLHFCDACQKGKSHRLPFSRSVSHTWQPLELVHCDLWGPSPIVSIVGYKYYISFVDDFTRLAHIYPLKTKGEAFSSFSQYKLLVANRFE
NV +N SL FCDACQ GKSH LPF + PLELVH D+WGPSPI+S ++YYI F+DDF+R IYPLK K EA ++F Q+KLLV N+F
Subjt: KSCNVSTFLNESLHFCDACQKGKSHRLPFSRSVSHTWQPLELVHCDLWGPSPIVSIVGYKYYISFVDDFTRLAHIYPLKTKGEAFSSFSQYKLLVANRFE
Query: KKIKTLQTDWGGEFRSFTSFLRDNGIEFRHSCPHTSQQNGIVERKHRHIVEMGLTLLAQASMPLTYWWEAFSSAVYIINCLPTPILGDVSPWEQAFH---
++K +QTDWGGE++ F F D+GI F+H CPHTS QNG ERKHRHIVEMGLTLLAQA +P YWW+AF +AVY+IN LPTP+L +P+E F
Subjt: KKIKTLQTDWGGEFRSFTSFLRDNGIEFRHSCPHTSQQNGIVERKHRHIVEMGLTLLAQASMPLTYWWEAFSSAVYIINCLPTPILGDVSPWEQAFH---
Query: ------------YPCLRLYQSHKFQHHSTKCVFLGYSLAHKGYKCLSSSGRLFISCHVVFNESEFPFKSELVPSSGPSN--IALVP--------------
+PCLR YQ+HKFQ HSTKCV LGYS HKGYKCLSS+GRL+IS V+FNE EFPFKS + ++ P LVP
Subjt: ------------YPCLRLYQSHKFQHHSTKCVFLGYSLAHKGYKCLSSSGRLFISCHVVFNESEFPFKSELVPSSGPSN--IALVP--------------
Query: --HHSSPVAEFQTSSPTLSTPPQDQYVSPQLSAH---------SPEGHSCPASVMPL--------YTSSMLPVDGSSDGSPELPLQISTALNSHPMQTRA
SS + QT TP + V P LS S G+ S + + S+ P+D S+ + +++HPM TRA
Subjt: --HHSSPVAEFQTSSPTLSTPPQDQYVSPQLSAH---------SPEGHSCPASVMPL--------YTSSMLPVDGSSDGSPELPLQISTALNSHPMQTRA
Query: KSGIFKQKDW---GAFLVNSSFSPEVEPTSVKEALKSSQWKAAMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFKVKRKSNSSFDRCKARLVAQGFNQV
K+GIFK K + ++ NSS EP S++EAL+ W AM+ E+ L RN TW LVP LP++++I +KW++K KR ++ SF R KARLVA+GF Q
Subjt: KSGIFKQKDW---GAFLVNSSFSPEVEPTSVKEALKSSQWKAAMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFKVKRKSNSSFDRCKARLVAQGFNQV
Query: PGVDFHETFSPVVKAPTIQIILAVAVMKNWSIRQLDVNNIFLNGRLQEAVYMRQLTGYIDQSCPDYVCKLDKALYGLRQASRA
PGVDF ETFSPV+KA T++I+L++AV K W +RQLD+NN FLNG + E +YM+Q G+ D++ P++VCKL K++YGLRQA RA
Subjt: PGVDFHETFSPVVKAPTIQIILAVAVMKNWSIRQLDVNNIFLNGRLQEAVYMRQLTGYIDQSCPDYVCKLDKALYGLRQASRA
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 2.0e-53 | 24.42 | Show/hide |
Query: DDKNYLLWKDMVLAILRGQKVDMYVLGTKAQPSELIETTTESGKMLLSNMLYEEWMTVDQALSGWLFGSMSPAIAADVINFKTLREVWKALEEVYGDTSK
D + Y +WK + A+L Q V V G L+ N + + W ++ + +S + + T R++ + L+ VY S
Subjt: DDKNYLLWKDMVLAILRGQKVDMYVLGTKAQPSELIETTTESGKMLLSNMLYEEWMTVDQALSGWLFGSMSPAIAADVINFKTLREVWKALEEVYGDTSK
Query: ACVNQFRGILQNTKKGS-MKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSEYIPIVCAID--DKDLKTWQELSSILINFEGTLARYSTPTNAH
A R L + K S M ++ + I + L G + D +S++L L S Y I+ AI+ ++ T + + L++ E + T+
Subjt: ACVNQFRGILQNTKKGS-MKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSEYIPIVCAID--DKDLKTWQELSSILINFEGTLARYSTPTNAH
Query: FDLPDLATHLALNRQSMFDNQRQFNPSNGNRGNDNNSGSYYGSG-NGQMGNNPTQGTAMVEIEEEEVEGATIFREEITTCYMRFEEHFNNLHASGN-GSV
+ + + ++F N R P +GN + G G + + ++ + +E E +M + NN N G V
Subjt: FDLPDLATHLALNRQSMFDNQRQFNPSNGNRGNDNNSGSYYGSG-NGQMGNNPTQGTAMVEIEEEEVEGATIFREEITTCYMRFEEHFNNLHASGN-GSV
Query: QGNNSNN---ASSSAYIATPEILHDPKWLADSGATNHVTANARNLA-VKMDYNV-LNNILHVPEIRKNLISIASLTVDNNVVVEFHSNYCVVKDKASKKV
+ +++ S Y + E++ P +A + + A R + ++ D+ + L ++L E NL+S+ L + + +EF + + V
Subjt: QGNNSNN---ASSSAYIATPEILHDPKWLADSGATNHVTANARNLA-VKMDYNV-LNNILHVPEIRKNLISIASLTVDNNVVVEFHSNYCVVKDKASKKV
Query: MLHEILRNDLYQIELPSIQTPKSEIRSTSFAGLWHNRLGHASSKVI-----KSVLKSCNVSTFLNESLHFCDACQKGKSHRLPFS--RSVSHTWQPLELV
+L N + + + Q + + LWH R GH S + K++ ++ L S C+ C GK RLPF + +H +PL +V
Subjt: MLHEILRNDLYQIELPSIQTPKSEIRSTSFAGLWHNRLGHASSKVI-----KSVLKSCNVSTFLNESLHFCDACQKGKSHRLPFS--RSVSHTWQPLELV
Query: HCDLWGPSPIVSIVGYKYYISFVDDFTRLAHIYPLKTKGEAFSSFSQYKLLVANRFEKKIKTLQTDWGGEFRS--FTSFLRDNGIEFRHSCPHTSQQNGI
H D+ GP V++ Y++ FVD FT Y +K K + FS F + F K+ L D G E+ S F GI + + PHT Q NG+
Subjt: HCDLWGPSPIVSIVGYKYYISFVDDFTRLAHIYPLKTKGEAFSSFSQYKLLVANRFEKKIKTLQTDWGGEFRS--FTSFLRDNGIEFRHSCPHTSQQNGI
Query: VERKHRHIVEMGLTLLAQASMPLTYWWEAFSSAVYIINCLPTPILGDVS--PWE----QAFHYPCLRLY----------QSHKFQHHSTKCVFLGYSLAH
ER R I E T+++ A + ++W EA +A Y+IN +P+ L D S P+E + + LR++ + KF S K +F+GY
Subjt: VERKHRHIVEMGLTLLAQASMPLTYWWEAFSSAVYIINCLPTPILGDVS--PWE----QAFHYPCLRLY----------QSHKFQHHSTKCVFLGYSLAH
Query: KGYKCLSSSGRLFISCHVV-------FNESEFPFKSELVPSSGPSNIALVPHHSSPVAEFQTSSPTLSTP------------------PQD--QYVSPQL
G+K + FI V N F++ + S S P+ S + QT P S P D + + +
Subjt: KGYKCLSSSGRLFISCHVV-------FNESEFPFKSELVPSSGPSNIALVPHHSSPVAEFQTSSPTLSTP------------------PQD--QYVSPQL
Query: SAHSPE-------GHSCPASVMPLYTSSMLPVD-----GSSDGSPELPLQISTA-------------------LNSHPMQTRAKSGI-FKQKD--WGAFL
S E S ++ L S D G+P + TA +N + + K I + ++D +
Subjt: SAHSPE-------GHSCPASVMPLYTSSMLPVD-----GSSDGSPELPLQISTA-------------------LNSHPMQTRAKSGI-FKQKD--WGAFL
Query: VNSSFSPEVEPTSVKEAL---KSSQWKAAMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFKVKRKSNSSFDRCKARLVAQGFNQVPGVDFHETFSPVVK
+N+ P S E S W+ A+N E+ N TWT+ N N++ S+W+F VK + R KARLVA+GF Q +D+ ETF+PV +
Subjt: VNSSFSPEVEPTSVKEAL---KSSQWKAAMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFKVKRKSNSSFDRCKARLVAQGFNQVPGVDFHETFSPVVK
Query: APTIQIILAVAVMKNWSIRQLDVNNIFLNGRLQEAVYMRQLTGYIDQSC-PDYVCKLDKALYGLRQASR
+ + IL++ + N + Q+DV FLNG L+E +YMR G SC D VCKL+KA+YGL+QA+R
Subjt: APTIQIILAVAVMKNWSIRQLDVNNIFLNGRLQEAVYMRQLTGYIDQSC-PDYVCKLDKALYGLRQASR
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.2e-73 | 26.06 | Show/hide |
Query: MLYEEWMTVDQALSGWLFGSMSPAIAADVINFKTLREVWKALEEVYGDTSKACVNQF---RGILQNTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDL
M E+W +D+ + + +S + ++I+ T R +W LE +Y SK N+ + + + +L + L +G + +D
Subjt: MLYEEWMTVDQALSGWLFGSMSPAIAADVINFKTLREVWKALEEVYGDTSKACVNQF---RGILQNTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDL
Query: VSYVLAGLDSEYIPIVCAIDDKDLKTWQELSSILINFEGTLARYSTPTNAHFDLPDLATHLALNR--QSMFDNQRQFNPSNGNRGNDNNSGSYYGSGNGQ
+L L S Y L++ +++ + T+ +L D+ + L LN + +NQ Q + G + S + YG +G
Subjt: VSYVLAGLDSEYIPIVCAIDDKDLKTWQELSSILINFEGTLARYSTPTNAHFDLPDLATHLALNR--QSMFDNQRQFNPSNGNRGNDNNSGSYYGSGNGQ
Query: MGNNPTQGTAMVEIEEEEVEGATIFREEITTCY-MRFEEHF-----NNLHASGNGSVQGNNSNNASSSA--------YIATPEILH----DPKWLADSGA
G + + + + CY HF N G S Q N+ N A+ E +H + +W+ D+ A
Subjt: MGNNPTQGTAMVEIEEEEVEGATIFREEITTCY-MRFEEHF-----NNLHASGNGSVQGNNSNNASSSA--------YIATPEILH----DPKWLADSGA
Query: TNHVT---------------------------ANARNLAVKMDYN---VLNNILHVPEIRKNLISIASLTVDNNVVVEFHSNYCVVKDKASKKVMLHEIL
++H T A ++ +K + VL ++ HVP++R NLIS + +D + + +N K S V+ +
Subjt: TNHVT---------------------------ANARNLAVKMDYN---VLNNILHVPEIRKNLISIASLTVDNNVVVEFHSNYCVVKDKASKKVMLHEIL
Query: RNDLYQIELPSIQTPKSEIRSTSFAGLWHNRLGHASSKVIKSVLKSCNVSTFLNESLHFCDACQKGKSHRLPFSRSVSHTWQPLELVHCDLWGPSPIVSI
R LY+ Q + + LWH R+GH S K ++ + K +S ++ CD C GK HR+ F S L+LV+ D+ GP I S+
Subjt: RNDLYQIELPSIQTPKSEIRSTSFAGLWHNRLGHASSKVIKSVLKSCNVSTFLNESLHFCDACQKGKSHRLPFSRSVSHTWQPLELVHCDLWGPSPIVSI
Query: VGYKYYISFVDDFTRLAHIYPLKTKGEAFSSFSQYKLLVANRFEKKIKTLQTDWGGEF--RSFTSFLRDNGIEFRHSCPHTSQQNGIVERKHRHIVEMGL
G KY+++F+DD +R +Y LKTK + F F ++ LV +K+K L++D GGE+ R F + +GI + P T Q NG+ ER +R IVE
Subjt: VGYKYYISFVDDFTRLAHIYPLKTKGEAFSSFSQYKLLVANRFEKKIKTLQTDWGGEF--RSFTSFLRDNGIEFRHSCPHTSQQNGIVERKHRHIVEMGL
Query: TLLAQASMPLTYWWEAFSSAVYIINCLPTPILGDVSP---W-EQAFHYPCLRLYQSHKFQH-----------HSTKCVFLGYSLAHKGYKCLSSSGRLFI
++L A +P ++W EA +A Y+IN P+ L P W + Y L+++ F H S C+F+GY GY+ + I
Subjt: TLLAQASMPLTYWWEAFSSAVYIINCLPTPILGDVSP---W-EQAFHYPCLRLYQSHKFQH-----------HSTKCVFLGYSLAHKGYKCLSSSGRLFI
Query: -SCHVVFNESEFPFKSELVPSSGPSNIALVPHHSSPVAEFQTSSPTLSTPPQDQYVSPQLSAHSPEGHSCPASVMPLYTSSMLPVDGSSDGSPELPLQIS
S VVF ESE +++ S ++P+ F T T + P + + ++S + P V+ + +G E+
Subjt: -SCHVVFNESEFPFKSELVPSSGPSNIALVPHHSSPVAEFQTSSPTLSTPPQDQYVSPQLSAHSPEGHSCPASVMPLYTSSMLPVDGSSDGSPELPLQIS
Query: TALNSHPMQTRAKSGIFKQKDWGAFLVNSSFSPEVEPTSVKEAL---KSSQWKAAMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFKVKRKSNSSFDRC
P++ + + ++ V S + EP S+KE L + +Q AM +E+ L +N T+ LV L + KW+FK+K+ + R
Subjt: TALNSHPMQTRAKSGIFKQKDWGAFLVNSSFSPEVEPTSVKEAL---KSSQWKAAMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFKVKRKSNSSFDRC
Query: KARLVAQGFNQVPGVDFHETFSPVVKAPTIQIILAVAVMKNWSIRQLDVNNIFLNGRLQEAVYMRQLTGYIDQSCPDYVCKLDKALYGLRQASR
KARLV +GF Q G+DF E FSPVVK +I+ IL++A + + QLDV FL+G L+E +YM Q G+ VCKL+K+LYGL+QA R
Subjt: KARLVAQGFNQVPGVDFHETFSPVVKAPTIQIILAVAVMKNWSIRQLDVNNIFLNGRLQEAVYMRQLTGYIDQSCPDYVCKLDKALYGLRQASR
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 4.9e-23 | 48.03 | Show/hide |
Query: MQTRAKSGIFKQKDWGAFLVNSSFSPEVEPTSVKEALKSSQWKAAMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFKVKRKSNSSFDRCKARLVAQGFN
M TR+K+GI K + + ++ + EP SV ALK W AM +E+ L+RNKTW LVP N N++G KW+FK K S+ + DR KARLVA+GF+
Subjt: MQTRAKSGIFKQKDWGAFLVNSSFSPEVEPTSVKEALKSSQWKAAMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFKVKRKSNSSFDRCKARLVAQGFN
Query: QVPGVDFHETFSPVVKAPTIQIILAVA
Q G+ F ET+SPVV+ TI+ IL VA
Subjt: QVPGVDFHETFSPVVKAPTIQIILAVA
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 4.7e-143 | 33.75 | Show/hide |
Query: KLDDKNYLLWKDMVLAILRGQKVDMYVLGTKAQPSELIETTTESGKMLLSNMLYEEWMTVDQALSGWLFGSMSPAIAADVINFKTLREVWKALEEVYGDT
KL NYL+W V A+ G ++ ++ G+ P I T N Y W D+ + + G++S ++ V T ++W+ L ++Y +
Subjt: KLDDKNYLLWKDMVLAILRGQKVDMYVLGTKAQPSELIETTTESGKMLLSNMLYEEWMTVDQALSGWLFGSMSPAIAADVINFKTLREVWKALEEVYGDT
Query: SKACVNQFRGILQNTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSEYIPIVCAIDDKDL-KTWQELSSILINFEGTLARYSTPTNAH
S V Q R L+ KG+ + DY+ + + L L+G P+ D+ V VL L EY P++ I KD T E+ L+N E + S+ T
Subjt: SKACVNQFRGILQNTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSEYIPIVCAIDDKDL-KTWQELSSILINFEGTLARYSTPTNAH
Query: FDLPDLATHLALNRQSMFDNQRQFNPSN--GNRGNDNNSGSYYGSGNGQMGNNPTQGTAMVEIEEEEVEGATIFREEITTCYMRFEEHFNNLHASGNGSV
+P A ++ + +N N +N NR N+NNS + S NN + + + V+G + R + F N+ +
Subjt: FDLPDLATHLALNRQSMFDNQRQFNPSN--GNRGNDNNSGSYYGSGNGQMGNNPTQGTAMVEIEEEEVEGATIFREEITTCYMRFEEHFNNLHASGNGSV
Query: QGNNSNNASSSAYIATPEILHDPKWLADSGATNHVTANARNLAVKMDYN------------------------------VLNNILHVPEIRKNLISIASL
+N A S Y + WL DSGAT+H+T++ NL++ Y L+NIL+VP I KNLIS+ L
Subjt: QGNNSNNASSSAYIATPEILHDPKWLADSGATNHVTANARNLAVKMDYN------------------------------VLNNILHVPEIRKNLISIASL
Query: TVDNNVVVEFHSNYCVVKDKASKKVMLHEILRNDLYQIELPSIQ------TPKSEIRSTSFAGLWHNRLGHASSKVIKSVLKSCNVSTFLNESLHF--CD
N V VEF VKD + +L +++LY+ + S Q +P S+ +S WH RLGH + ++ SV+ + ++S LN S F C
Subjt: TVDNNVVVEFHSNYCVVKDKASKKVMLHEILRNDLYQIELPSIQ------TPKSEIRSTSFAGLWHNRLGHASSKVIKSVLKSCNVSTFLNESLHF--CD
Query: ACQKGKSHRLPFSRSVSHTWQPLELVHCDLWGPSPIVSIVGYKYYISFVDDFTRLAHIYPLKTKGEAFSSFSQYKLLVANRFEKKIKTLQTDWGGEFRSF
C KS+++PFS+S ++ +PLE ++ D+W SPI+S Y+YY+ FVD FTR +YPLK K + +F +K L+ NRF+ +I T +D GGEF +
Subjt: ACQKGKSHRLPFSRSVSHTWQPLELVHCDLWGPSPIVSIVGYKYYISFVDDFTRLAHIYPLKTKGEAFSSFSQYKLLVANRFEKKIKTLQTDWGGEFRSF
Query: TSFLRDNGIEFRHSCPHTSQQNGIVERKHRHIVEMGLTLLAQASMPLTYWWEAFSSAVYIINCLPTPILGDVSPWEQAFH---------------YPCLR
+ +GI S PHT + NG+ ERKHRHIVE GLTLL+ AS+P TYW AF+ AVY+IN LPTP+L SP+++ F YP LR
Subjt: TSFLRDNGIEFRHSCPHTSQQNGIVERKHRHIVEMGLTLLAQASMPLTYWWEAFSSAVYIINCLPTPILGDVSPWEQAFH---------------YPCLR
Query: LYQSHKFQHHSTKCVFLGYSLAHKGYKCLS-SSGRLFISCHVVFNESEFPFKSELVPSSG-------------------------PSNIALVPHH-----
Y HK S +CVFLGYSL Y CL + RL+IS HV F+E+ FPF + L S P+ PHH
Subjt: LYQSHKFQHHSTKCVFLGYSLAHKGYKCLS-SSGRLFISCHVVFNESEFPFKSELVPSSG-------------------------PSNIALVPHH-----
Query: SSPVAEFQT-----------------SSPTLSTP------PQDQYVSPQLSAHSPEGHS--CPASVMPLYTSSMLPVDGSSDGSPELPLQISTA------
SSP A F+ SSP + P P Q Q HS + S P + P + L S S P +++
Subjt: SSPVAEFQT-----------------SSPTLSTP------PQDQYVSPQLSAHSPEGHS--CPASVMPLYTSSMLPVDGSSDGSPELPLQISTA------
Query: -----------------------LNSHPMQTRAKSGIFKQKDWGAFLVNSSFSPEVEPTSVKEALKSSQWKAAMNDEIAVLTRNKTWTLVPLLP-NLNLI
LN+H M TRAK+GI K + V S + E EP + +ALK +W+ AM EI N TW LVP P ++ ++
Subjt: -----------------------LNSHPMQTRAKSGIFKQKDWGAFLVNSSFSPEVEPTSVKEALKSSQWKAAMNDEIAVLTRNKTWTLVPLLP-NLNLI
Query: GSKWIFKVKRKSNSSFDRCKARLVAQGFNQVPGVDFHETFSPVVKAPTIQIILAVAVMKNWSIRQLDVNNIFLNGRLQEAVYMRQLTGYIDQSCPDYVCK
G +WIF K S+ S +R KARLVA+G+NQ PG+D+ ETFSPV+K+ +I+I+L VAV ++W IRQLDVNN FL G L + VYM Q G+ID+ P+YVCK
Subjt: GSKWIFKVKRKSNSSFDRCKARLVAQGFNQVPGVDFHETFSPVVKAPTIQIILAVAVMKNWSIRQLDVNNIFLNGRLQEAVYMRQLTGYIDQSCPDYVCK
Query: LDKALYGLRQASRA
L KALYGL+QA RA
Subjt: LDKALYGLRQASRA
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 5.1e-137 | 32.69 | Show/hide |
Query: TNIISSSLGHPLSTVLTVKLDDKNYLLWKDMVLAILRGQKVDMYVLGTKAQPSELIETTTESGKMLLSNMLYEEWMTVDQALSGWLFGSMSPAIAADVIN
TNI++ ++ + KL NYL+W V A+ G ++ ++ G+ P I T + N Y W D+ + + G++S ++ V
Subjt: TNIISSSLGHPLSTVLTVKLDDKNYLLWKDMVLAILRGQKVDMYVLGTKAQPSELIETTTESGKMLLSNMLYEEWMTVDQALSGWLFGSMSPAIAADVIN
Query: FKTLREVWKALEEVYGDTSKACVNQFRGILQNTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSEYIPIVCAIDDKDL-KTWQELSSI
T ++W+ L ++Y + S V Q R I + + L L+G P+ D+ V VL L +Y P++ I KD + E+
Subjt: FKTLREVWKALEEVYGDTSKACVNQFRGILQNTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSEYIPIVCAIDDKDL-KTWQELSSI
Query: LINFEGTLARYSTPTNAHFDLPDLATHLALNRQSMFDNQRQFNPSNGNRGNDNN-SGSYYGSGNGQMGNNPTQGTAMVEIEEEEVEGATIFREEITTCYM
LIN E L ++ ++ + ++ +R + + + N N N+NN S S+ S +G +N + + V+G + R
Subjt: LINFEGTLARYSTPTNAHFDLPDLATHLALNRQSMFDNQRQFNPSNGNRGNDNN-SGSYYGSGNGQMGNNPTQGTAMVEIEEEEVEGATIFREEITTCYM
Query: RFEEHFNNLHASGNGSVQGNNSNNASSSAYIATPEILHDPKWLADSGATNHVTANARNLAVKMDYN------------------------------VLNN
+F+ N ++ + +N A +S Y A WL DSGAT+H+T++ NL+ Y LN
Subjt: RFEEHFNNLHASGNGSVQGNNSNNASSSAYIATPEILHDPKWLADSGATNHVTANARNLAVKMDYN------------------------------VLNN
Query: ILHVPEIRKNLISIASLTVDNNVVVEFHSNYCVVKDKASKKVMLHEILRNDLYQIELPSIQTPKSEIRSTSFA--GLWHNRLGHASSKVIKSVLKSCNVS
+L+VP I KNLIS+ L N V VEF VKD + +L +++LY+ + S Q S A WH+RLGH S ++ SV+ + ++
Subjt: ILHVPEIRKNLISIASLTVDNNVVVEFHSNYCVVKDKASKKVMLHEILRNDLYQIELPSIQTPKSEIRSTSFA--GLWHNRLGHASSKVIKSVLKSCNVS
Query: TFLNES--LHFCDACQKGKSHRLPFSRSVSHTWQPLELVHCDLWGPSPIVSIVGYKYYISFVDDFTRLAHIYPLKTKGEAFSSFSQYKLLVANRFEKKIK
LN S L C C KSH++PFS S + +PLE ++ D+W SPI+SI Y+YY+ FVD FTR +YPLK K + +F +K LV NRF+ +I
Subjt: TFLNES--LHFCDACQKGKSHRLPFSRSVSHTWQPLELVHCDLWGPSPIVSIVGYKYYISFVDDFTRLAHIYPLKTKGEAFSSFSQYKLLVANRFEKKIK
Query: TLQTDWGGEFRSFTSFLRDNGIEFRHSCPHTSQQNGIVERKHRHIVEMGLTLLAQASMPLTYWWEAFSSAVYIINCLPTPILGDVSPWEQAFH-------
TL +D GGEF +L +GI S PHT + NG+ ERKHRHIVEMGLTLL+ AS+P TYW AFS AVY+IN LPTP+L SP+++ F
Subjt: TLQTDWGGEFRSFTSFLRDNGIEFRHSCPHTSQQNGIVERKHRHIVEMGLTLLAQASMPLTYWWEAFSSAVYIINCLPTPILGDVSPWEQAFH-------
Query: --------YPCLRLYQSHKFQHHSTKCVFLGYSLAHKGYKCLS-SSGRLFISCHVVFNESEFPFK----------------------------SELV---
YP LR Y HK + S +C F+GYSL Y CL +GRL+ S HV F+E FPF + LV
Subjt: --------YPCLRLYQSHKFQHHSTKCVFLGYSLAHKGYKCLS-SSGRLFISCHVVFNESEFPFK----------------------------SELV---
Query: -------------PSSGPSNIALVPHHSSPVAEFQTSSPTLSTPPQDQYVSPQLSA--------------------HSPEGHSCPASVMPL----YTSSM
P S PS + SS + SSP+ S P + PQ +A +SP +S P PL +S
Subjt: -------------PSSGPSNIALVPHHSSPVAEFQTSSPTLSTPPQDQYVSPQLSA--------------------HSPEGHSCPASVMPL----YTSSM
Query: LPVDGSSDGSPELPLQISTA---------------------LNSHPMQTRAKSGIFKQKDWGAFLVNSSFSPEVEPTSVKEALKSSQWKAAMNDEIAVLT
+P +S P P ST+ +N+H M TRAK GI K + +S + EP + +A+K +W+ AM EI
Subjt: LPVDGSSDGSPELPLQISTA---------------------LNSHPMQTRAKSGIFKQKDWGAFLVNSSFSPEVEPTSVKEALKSSQWKAAMNDEIAVLT
Query: RNKTWTLV-PLLPNLNLIGSKWIFKVKRKSNSSFDRCKARLVAQGFNQVPGVDFHETFSPVVKAPTIQIILAVAVMKNWSIRQLDVNNIFLNGRLQEAVY
N TW LV P P++ ++G +WIF K S+ S +R KARLVA+G+NQ PG+D+ ETFSPV+K+ +I+I+L VAV ++W IRQLDVNN FL G L + VY
Subjt: RNKTWTLV-PLLPNLNLIGSKWIFKVKRKSNSSFDRCKARLVAQGFNQVPGVDFHETFSPVVKAPTIQIILAVAVMKNWSIRQLDVNNIFLNGRLQEAVY
Query: MRQLTGYIDQSCPDYVCKLDKALYGLRQASRA
M Q G++D+ PDYVC+L KA+YGL+QA RA
Subjt: MRQLTGYIDQSCPDYVCKLDKALYGLRQASRA
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G34070.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162) | 4.6e-08 | 22.86 | Show/hide |
Query: LDDKNYLLWKDMVLAILRGQKVDMYVLGTKAQPSELIETTTESGKMLLSNMLYEEWMTVDQALSGWLFGSMSP-AIAADVINFKTLREVWKALEEVYGDT
+++ NY W+++ L V ++ GT +L +N W D + L+G+++P + T R++W ++ + +
Subjt: LDDKNYLLWKDMVLAILRGQKVDMYVLGTKAQPSELIETTTESGKMLLSNMLYEEWMTVDQALSGWLFGSMSP-AIAADVINFKTLREVWKALEEVYGDT
Query: SKACVNQFRGILQNTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSEYIPIVCAIDDKD-LKTWQELSSILINFEGTLARYSTPTNAH
A + L+ G M++ DY MK+ +++L+ V PV+ +LV YVL GL+ ++ I+ I + ++ + +++L E L R P H
Subjt: SKACVNQFRGILQNTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSEYIPIVCAIDDKD-LKTWQELSSILINFEGTLARYSTPTNAH
Query: FDLPDLATHLALNRQSMFDN-QRQFNPSNGNRGNDNNSGSYYGSG
D +T LA + N QR G RG + + G G
Subjt: FDLPDLATHLALNRQSMFDN-QRQFNPSNGNRGNDNNSGSYYGSG
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 2.6e-35 | 45 | Show/hide |
Query: EPTSVKEALKSSQWKAAMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFKVKRKSNSSFDRCKARLVAQGFNQVPGVDFHETFSPVVKAPTIQIILAVAV
EP++ EA + W AM+DEI + TW + L PN IG KW++K+K S+ + +R KARLVA+G+ Q G+DF ETFSPV K ++++ILA++
Subjt: EPTSVKEALKSSQWKAAMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFKVKRKSNSSFDRCKARLVAQGFNQVPGVDFHETFSPVVKAPTIQIILAVAV
Query: MKNWSIRQLDVNNIFLNGRLQEAVYMRQLTGYI----DQSCPDYVCKLDKALYGLRQASR
+ N+++ QLD++N FLNG L E +YM+ GY D P+ VC L K++YGL+QASR
Subjt: MKNWSIRQLDVNNIFLNGRLQEAVYMRQLTGYI----DQSCPDYVCKLDKALYGLRQASR
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| AT5G48050.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162) | 7.5e-11 | 24.12 | Show/hide |
Query: LTVKLDDKNYLLWKDMVLAILRGQKVDMYVLGTKAQPSELIETTTESGKMLLSNMLYEEWMTVDQALSGWLFGSMSPAIAADVINFK-TLREVWKALEEV
+T+ L+ NY +W+++ + V ++ G+ + P+ + E + W D + W++G+++ ++ +I T R++W +LE +
Subjt: LTVKLDDKNYLLWKDMVLAILRGQKVDMYVLGTKAQPSELIETTTESGKMLLSNMLYEEWMTVDQALSGWLFGSMSPAIAADVINFK-TLREVWKALEEV
Query: YGDTSKACVNQFRGILQNTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSEYIPIVCAIDDKD-LKTWQELSSILINFEGTLARYSTP
+ D +A QF L+ T + + +Y +K S+ L V +P+S LV ++L GL +Y I+ I K ++ E S+L+ E L+ S
Subjt: YGDTSKACVNQFRGILQNTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSEYIPIVCAIDDKD-LKTWQELSSILINFEGTLARYSTP
Query: TNAHFDLPDLATHL--ALNRQSMFDNQRQFNPSNGNRGNDNNSGSYYGSGNGQMGNN
+ +H + P L+ L +Q + + N SN RG GS +G+ NN
Subjt: TNAHFDLPDLATHL--ALNRQSMFDNQRQFNPSNGNRGNDNNSGSYYGSGNGQMGNN
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| ATMG00300.1 Gag-Pol-related retrotransposon family protein | 9.8e-11 | 36.84 | Show/hide |
Query: RNDLYQIELPSIQTPKSEIRSTS--FAGLWHNRLGHASSKVIKSVLKSCNVSTFLNESLHFCDACQKGKSHRLPFSRSVSHTWQPLELVHCDLWG
R+D I S++T +S + T+ LWH+RL H S + ++ ++K + + SL FC+ C GK+HR+ FS T PL+ VH DLWG
Subjt: RNDLYQIELPSIQTPKSEIRSTS--FAGLWHNRLGHASSKVIKSVLKSCNVSTFLNESLHFCDACQKGKSHRLPFSRSVSHTWQPLELVHCDLWG
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 3.5e-24 | 48.03 | Show/hide |
Query: MQTRAKSGIFKQKDWGAFLVNSSFSPEVEPTSVKEALKSSQWKAAMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFKVKRKSNSSFDRCKARLVAQGFN
M TR+K+GI K + + ++ + EP SV ALK W AM +E+ L+RNKTW LVP N N++G KW+FK K S+ + DR KARLVA+GF+
Subjt: MQTRAKSGIFKQKDWGAFLVNSSFSPEVEPTSVKEALKSSQWKAAMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFKVKRKSNSSFDRCKARLVAQGFN
Query: QVPGVDFHETFSPVVKAPTIQIILAVA
Q G+ F ET+SPVV+ TI+ IL VA
Subjt: QVPGVDFHETFSPVVKAPTIQIILAVA
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