; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0008936 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008936
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr9:32742734..32745817
RNA-Seq ExpressionLag0008936
SyntenyLag0008936
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ONI01138.1 hypothetical protein PRUPE_6G123900 [Prunus persica]2.4e-4234.92Show/hide
Query:  MMARFWWCGVEEDRRIHWA-------TDFLPG----------------------PCPERAILPVLGV----------FGVGNRPSFIWRSLMWGRELLGR
        +MARFWW   ++ R IHW        + F  G                        PE  +  +               VG  PSFIWRSL WG+ELL +
Subjt:  MMARFWWCGVEEDRRIHWA-------TDFLPG----------------------PCPERAILPVLGV----------FGVGNRPSFIWRSLMWGRELLGR

Query:  GTRWRIGNGVRVSVYGSNWVPQDTNLRNVSPMTLLPDARVRDLFTASGQWNEVLIRQHFSPQEARHILSIPLRQVACEDTLIWHFEKSGLYSVRSGYRL-
        G RWR+G+GV + VY   W+P  +  + +SP  L    RV DLFT+SGQWN  L++  F  QE   IL IPL  +A  D LIWH+E++G+YSV+SGYRL 
Subjt:  GTRWRIGNGVRVSVYGSNWVPQDTNLRNVSPMTLLPDARVRDLFTASGQWNEVLIRQHFSPQEARHILSIPLRQVACEDTLIWHFEKSGLYSVRSGYRL-

Query:  GQGPLLAQSPSSSSPELVHRWWNECWSIKIPNKIKIFFWRLL---------------------------GESSLHLFWHCKHTKEMMWSAGFGAI
        G          S+  +L  ++W + W++KIPNKIK F WR                              ES LH  W C+  KE+  ++ +G +
Subjt:  GQGPLLAQSPSSSSPELVHRWWNECWSIKIPNKIKIFFWRLL---------------------------GESSLHLFWHCKHTKEMMWSAGFGAI

ONI09819.1 hypothetical protein PRUPE_4G011200 [Prunus persica]4.5e-4135.42Show/hide
Query:  MMARFWWCGVEEDRRIHWA-------TDFLPG----------------------PCPERAILPVLGV----------FGVGNRPSFIWRSLMWGRELLGR
        +MARFWW   ++ R IHW        + F  G                        PE  +  +               VG  PSFIW SL WG+ELL +
Subjt:  MMARFWWCGVEEDRRIHWA-------TDFLPG----------------------PCPERAILPVLGV----------FGVGNRPSFIWRSLMWGRELLGR

Query:  GTRWRIGNGVRVSVYGSNWVPQDTNLRNVSPMTLLPDARVRDLFTASGQWNEVLIRQHFSPQEARHILSIPLRQVACEDTLIWHFEKSGLYSVRSGYRLG
        G RWR+G+GV + VY   W+P  +  + +SP  L    RV DLFT+SGQWN  L++  F  QE   IL IPL  +A  D LIWH+E++G+YSV+SGYRL 
Subjt:  GTRWRIGNGVRVSVYGSNWVPQDTNLRNVSPMTLLPDARVRDLFTASGQWNEVLIRQHFSPQEARHILSIPLRQVACEDTLIWHFEKSGLYSVRSGYRLG

Query:  QGPLLAQSPSSSSP----ELVHRWWNECWSIKIPNKIKIFFWRLL---------------------------GESSLHLFWHCKHTKE
        +   L +   S  P    +L  ++W + W++KIPNKIK F WR                              ES LH  W C+  KE
Subjt:  QGPLLAQSPSSSSP----ELVHRWWNECWSIKIPNKIKIFFWRLL---------------------------GESSLHLFWHCKHTKE

VVA32947.1 PREDICTED: retrotransposon [Prunus dulcis]2.0e-4134.56Show/hide
Query:  MMARFWWCGVEEDRRIHWA-------TDFLPG----------------------PCPERAILPVLGV----------FGVGNRPSFIWRSLMWGRELLGR
        +MARFWW   ++ R IHW        + F  G                        PE  +  +               VG  PSFIWRSL WG+ELL +
Subjt:  MMARFWWCGVEEDRRIHWA-------TDFLPG----------------------PCPERAILPVLGV----------FGVGNRPSFIWRSLMWGRELLGR

Query:  GTRWRIGNGVRVSVYGSNWVPQDTNLRNVSPMTLLPDARVRDLFTASGQWNEVLIRQHFSPQEARHILSIPLRQVACEDTLIWHFEKSGLYSVRSGYRLG
        G RWR+GNGV + VY   W+P  +  + +SP  L     V DLFT+SGQWN  L++  F  QE    L IPL  +A  D LIWH+E++G+YSV+SGYRL 
Subjt:  GTRWRIGNGVRVSVYGSNWVPQDTNLRNVSPMTLLPDARVRDLFTASGQWNEVLIRQHFSPQEARHILSIPLRQVACEDTLIWHFEKSGLYSVRSGYRLG

Query:  QGPLLAQSPSSSSP----ELVHRWWNECWSIKIPNKIKIFFWRLL---------------------------GESSLHLFWHCKHTKEMMWSAGFGAI
            L +   S  P    +L  ++W + W++KIPNKIK F WR                              ES LH  W C+  KE+  ++ +G +
Subjt:  QGPLLAQSPSSSSP----ELVHRWWNECWSIKIPNKIKIFFWRLL---------------------------GESSLHLFWHCKHTKEMMWSAGFGAI

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]2.6e-4929.53Show/hide
Query:  ARFWWCGVEEDRRIHWAT-----------------------DFLPGPC------PERAILPVL-GVF---------GVGNRPSFIWRSLMWGRELLGRGT
        ARFWW   +ED++IHW                           L   C      P   +  VL G +          +   PS+IWRS++WGR+LL +G 
Subjt:  ARFWWCGVEEDRRIHWAT-----------------------DFLPGPC------PERAILPVL-GVF---------GVGNRPSFIWRSLMWGRELLGRGT

Query:  RWRIGNGVRVSVYGSNWVPQDTNLRNVSPMTLLPDARVRDLFT-ASGQWNEVLIRQHFSPQEARHILSIPLRQVACEDTLIWHFEKSGLYSVRSGYRLG-
        RWRIGNG  V +YG NWVP    L+ +S   L   +RV  L     G W   ++R  F+P EA+ ILSIP+ + A ED LIW++EK+G+YSVRSGY++  
Subjt:  RWRIGNGVRVSVYGSNWVPQDTNLRNVSPMTLLPDARVRDLFT-ASGQWNEVLIRQHFSPQEARHILSIPLRQVACEDTLIWHFEKSGLYSVRSGYRLG-

Query:  -QGPLLAQSPSSSSPELVHRWWNECWSIKIPNKIKIFFWRLL---------------------------GESSLHLFWHCKHTKEMMWSAGFGAI-----
           P + Q+PSSSS E V  WWN  W + IPNKIK+F WRL                            GE S+HLFW CK  + +  ++ FG +     
Subjt:  -QGPLLAQSPSSSSPELVHRWWNECWSIKIPNKIKIFFWRLL---------------------------GESSLHLFWHCKHTKEMMWSAGFGAI-----

Query:  -------VSKCEAVDIMGDLEG-----DGPAGGKSSRVVCR-----------------------------------WAPLEFDGFKVNVDAAFCLERGAA
               +SK +  ++   + G     +  A   S++ V +                                   W P +   +K+N DA+F      A
Subjt:  -------VSKCEAVDIMGDLEG-----DGPAGGKSSRVVCR-----------------------------------WAPLEFDGFKVNVDAAFCLERGAA

Query:  GVGMVCRDSLGQA-CGGDGYRPFVLETD-----------SLRVSKLLRREVEEVSELRMLVEDAVRGAPVGWFVEGSFTFREGNRVVHRLARLAMEDRCD
        G+G++  +  GQ       Y   +   D            L     +   +E++SE   +V  A            +F  REGN+  H LAR A+     
Subjt:  GVGMVCRDSLGQA-CGGDGYRPFVLETD-----------SLRVSKLLRREVEEVSELRMLVEDAVRGAPVGWFVEGSFTFREGNRVVHRLARLAMEDRCD

Query:  RVWMEEGP
         +WME+ P
Subjt:  RVWMEEGP

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]1.6e-4326.73Show/hide
Query:  MARFWWCGVEEDRR-IHWA-------------------TDFLPG----------PCPERAILPVLGV----------FGVGNRPSFIWRSLMWGRELLGR
        MARFWW G ++DR+ IHWA                   + F               P   +  VL             G+G++PSF+WRS++WGR++L +
Subjt:  MARFWWCGVEEDRR-IHWA-------------------TDFLPG----------PCPERAILPVLGV----------FGVGNRPSFIWRSLMWGRELLGR

Query:  GTRWRIGNGVRVSVYGSNWVPQDTNLRNVSPMTLLPDARVRDLFTASGQWNEVLIRQHFSPQEARHILSIPLRQVACEDTLIWHFEKSGLYSVRSGYRLG
        G RWRIGNG  V VYG+NW+P+ T  + +S  ++  D  V +L     QW E LI QHF P++A  I+ IPL +   ED LIWH++K G YSV+SGY++ 
Subjt:  GTRWRIGNGVRVSVYGSNWVPQDTNLRNVSPMTLLPDARVRDLFTASGQWNEVLIRQHFSPQEARHILSIPLRQVACEDTLIWHFEKSGLYSVRSGYRLG

Query:  QGPLLAQSPSSSSPELVHRWWNECWSIKIPNKIKIFFWRLLG---------------------------ESSLHLFWHCKHTKEMMWSAGFGAI---VSK
              + PS S+ +     W   W + IP K+KIF WR                              E+  H    C   +++   +        V +
Subjt:  QGPLLAQSPSSSSPELVHRWWNECWSIKIPNKIKIFFWRLLG---------------------------ESSLHLFWHCKHTKEMMWSAGFGAI---VSK

Query:  CEAVDIM-------GDLEGDGPAG---------------GKSS---RVVC-----------------------------RWAPLEFDGFKVNVDAAFCLE
        C+ V ++         +EG   A                GK     RVV                              +W+P      KVNVDAA  +E
Subjt:  CEAVDIM-------GDLEGDGPAG---------------GKSS---RVVC-----------------------------RWAPLEFDGFKVNVDAAFCLE

Query:  RGAAGVGMVCRDSLGQACGGDGYRPF-----------------------------VLETDSLRVSKLLRREVEEVSELRMLVEDAVRGAPVGWFVEGSFT
           AG+G+V RDS G  C     +                               + E+DSL V  L+ ++   ++E+  L+ D           +   +
Subjt:  RGAAGVGMVCRDSLGQACGGDGYRPF-----------------------------VLETDSLRVSKLLRREVEEVSELRMLVEDAVRGAPVGWFVEGSFT

Query:  FREGNRVVHRLARLAMEDRCDRVWMEEGPSCVLGL
         R+ N   H LA+LA++ +   +W++E P  ++ L
Subjt:  FREGNRVVHRLARLAMEDRCDRVWMEEGPSCVLGL

TrEMBL top hitse value%identityAlignment
A0A251NPF0 Reverse transcriptase domain-containing protein1.2e-4234.92Show/hide
Query:  MMARFWWCGVEEDRRIHWA-------TDFLPG----------------------PCPERAILPVLGV----------FGVGNRPSFIWRSLMWGRELLGR
        +MARFWW   ++ R IHW        + F  G                        PE  +  +               VG  PSFIWRSL WG+ELL +
Subjt:  MMARFWWCGVEEDRRIHWA-------TDFLPG----------------------PCPERAILPVLGV----------FGVGNRPSFIWRSLMWGRELLGR

Query:  GTRWRIGNGVRVSVYGSNWVPQDTNLRNVSPMTLLPDARVRDLFTASGQWNEVLIRQHFSPQEARHILSIPLRQVACEDTLIWHFEKSGLYSVRSGYRL-
        G RWR+G+GV + VY   W+P  +  + +SP  L    RV DLFT+SGQWN  L++  F  QE   IL IPL  +A  D LIWH+E++G+YSV+SGYRL 
Subjt:  GTRWRIGNGVRVSVYGSNWVPQDTNLRNVSPMTLLPDARVRDLFTASGQWNEVLIRQHFSPQEARHILSIPLRQVACEDTLIWHFEKSGLYSVRSGYRL-

Query:  GQGPLLAQSPSSSSPELVHRWWNECWSIKIPNKIKIFFWRLL---------------------------GESSLHLFWHCKHTKEMMWSAGFGAI
        G          S+  +L  ++W + W++KIPNKIK F WR                              ES LH  W C+  KE+  ++ +G +
Subjt:  GQGPLLAQSPSSSSPELVHRWWNECWSIKIPNKIKIFFWRLL---------------------------GESSLHLFWHCKHTKEMMWSAGFGAI

A0A5E4FZN9 PREDICTED: retrotransposon9.7e-4234.56Show/hide
Query:  MMARFWWCGVEEDRRIHWA-------TDFLPG----------------------PCPERAILPVLGV----------FGVGNRPSFIWRSLMWGRELLGR
        +MARFWW   ++ R IHW        + F  G                        PE  +  +               VG  PSFIWRSL WG+ELL +
Subjt:  MMARFWWCGVEEDRRIHWA-------TDFLPG----------------------PCPERAILPVLGV----------FGVGNRPSFIWRSLMWGRELLGR

Query:  GTRWRIGNGVRVSVYGSNWVPQDTNLRNVSPMTLLPDARVRDLFTASGQWNEVLIRQHFSPQEARHILSIPLRQVACEDTLIWHFEKSGLYSVRSGYRLG
        G RWR+GNGV + VY   W+P  +  + +SP  L     V DLFT+SGQWN  L++  F  QE    L IPL  +A  D LIWH+E++G+YSV+SGYRL 
Subjt:  GTRWRIGNGVRVSVYGSNWVPQDTNLRNVSPMTLLPDARVRDLFTASGQWNEVLIRQHFSPQEARHILSIPLRQVACEDTLIWHFEKSGLYSVRSGYRLG

Query:  QGPLLAQSPSSSSP----ELVHRWWNECWSIKIPNKIKIFFWRLL---------------------------GESSLHLFWHCKHTKEMMWSAGFGAI
            L +   S  P    +L  ++W + W++KIPNKIK F WR                              ES LH  W C+  KE+  ++ +G +
Subjt:  QGPLLAQSPSSSSP----ELVHRWWNECWSIKIPNKIKIFFWRLL---------------------------GESSLHLFWHCKHTKEMMWSAGFGAI

A0A6J1DAR4 uncharacterized protein LOC1110189541.3e-4929.53Show/hide
Query:  ARFWWCGVEEDRRIHWAT-----------------------DFLPGPC------PERAILPVL-GVF---------GVGNRPSFIWRSLMWGRELLGRGT
        ARFWW   +ED++IHW                           L   C      P   +  VL G +          +   PS+IWRS++WGR+LL +G 
Subjt:  ARFWWCGVEEDRRIHWAT-----------------------DFLPGPC------PERAILPVL-GVF---------GVGNRPSFIWRSLMWGRELLGRGT

Query:  RWRIGNGVRVSVYGSNWVPQDTNLRNVSPMTLLPDARVRDLFT-ASGQWNEVLIRQHFSPQEARHILSIPLRQVACEDTLIWHFEKSGLYSVRSGYRLG-
        RWRIGNG  V +YG NWVP    L+ +S   L   +RV  L     G W   ++R  F+P EA+ ILSIP+ + A ED LIW++EK+G+YSVRSGY++  
Subjt:  RWRIGNGVRVSVYGSNWVPQDTNLRNVSPMTLLPDARVRDLFT-ASGQWNEVLIRQHFSPQEARHILSIPLRQVACEDTLIWHFEKSGLYSVRSGYRLG-

Query:  -QGPLLAQSPSSSSPELVHRWWNECWSIKIPNKIKIFFWRLL---------------------------GESSLHLFWHCKHTKEMMWSAGFGAI-----
           P + Q+PSSSS E V  WWN  W + IPNKIK+F WRL                            GE S+HLFW CK  + +  ++ FG +     
Subjt:  -QGPLLAQSPSSSSPELVHRWWNECWSIKIPNKIKIFFWRLL---------------------------GESSLHLFWHCKHTKEMMWSAGFGAI-----

Query:  -------VSKCEAVDIMGDLEG-----DGPAGGKSSRVVCR-----------------------------------WAPLEFDGFKVNVDAAFCLERGAA
               +SK +  ++   + G     +  A   S++ V +                                   W P +   +K+N DA+F      A
Subjt:  -------VSKCEAVDIMGDLEG-----DGPAGGKSSRVVCR-----------------------------------WAPLEFDGFKVNVDAAFCLERGAA

Query:  GVGMVCRDSLGQA-CGGDGYRPFVLETD-----------SLRVSKLLRREVEEVSELRMLVEDAVRGAPVGWFVEGSFTFREGNRVVHRLARLAMEDRCD
        G+G++  +  GQ       Y   +   D            L     +   +E++SE   +V  A            +F  REGN+  H LAR A+     
Subjt:  GVGMVCRDSLGQA-CGGDGYRPFVLETD-----------SLRVSKLLRREVEEVSELRMLVEDAVRGAPVGWFVEGSFTFREGNRVVHRLARLAMEDRCD

Query:  RVWMEEGP
         +WME+ P
Subjt:  RVWMEEGP

A0A803P3X4 Uncharacterized protein6.7e-4326.32Show/hide
Query:  MMARFWWCGVEEDRRIHWATDFLPGPCPERAILPV--LGVFGVGNRPSFIWRSLMWGRELLGRGTRWRIGNGVRVSVYGSNWVPQDTNLRNVSPMTLLPD
        M ARFWW   E+D +IHW    +     E+  L    LG+F        IW SL+WG++++ +G RWRIG G  V V    W+P+    +      L   
Subjt:  MMARFWWCGVEEDRRIHWATDFLPGPCPERAILPV--LGVFGVGNRPSFIWRSLMWGRELLGRGTRWRIGNGVRVSVYGSNWVPQDTNLRNVSPMTLLPD

Query:  ARVRDLFTASGQWNEVLIRQHFSPQEARHILSIPLRQVACEDTLIWHFEKSGLYSVRSGYRLGQGPLLAQSPSSSSPELVHRWWNECWSIKIPNKIKIFF
          V DL   +G+W+E  +R  F+P +A  IL +P  +   ED ++WH+ K G YSVRSGYR+     L      S  E+  +WW   W +KIP K+K F 
Subjt:  ARVRDLFTASGQWNEVLIRQHFSPQEARHILSIPLRQVACEDTLIWHFEKSGLYSVRSGYRLGQGPLLAQSPSSSSPELVHRWWNECWSIKIPNKIKIFF

Query:  WRL----------------------------LGESSLHLFWHCKHTKEMMWSAGFGAIVSKCEAVDIMGDL-----------------------------
        W+L                            + E   H  W C+  +E+  S GF   + +  + D++  L                             
Subjt:  WRL----------------------------LGESSLHLFWHCKHTKEMMWSAGFGAIVSKCEAVDIMGDL-----------------------------

Query:  ------------------------EGDGPAGGKSSRVVCRWAPLEFDGFKVNVDAAFCLERGAAGVGMVCRDSLG-------------------------
                                E + P   +  R   RW P   D FK+NVDA    E G A +  V RD  G                         
Subjt:  ------------------------EGDGPAGGKSSRVVCRWAPLEFDGFKVNVDAAFCLERGAAGVGMVCRDSLG-------------------------

Query:  ---QACGGDGYRPFVLETDSLRVSKLLR------REVEE-VSELRMLVEDA-VRGAPVGWFVEGSFTFREGNRVVHRLARLAMEDRCDRVWMEEGPSCVL
           QA        F +E+D L+   L++      R+V+E V+ +R L+++  VRG         SF +RE N+V H LA  A+ ++   +W+   P C  
Subjt:  ---QACGGDGYRPFVLETDSLRVSKLLR------REVEE-VSELRMLVEDA-VRGAPVGWFVEGSFTFREGNRVVHRLARLAMEDRCDRVWMEEGPSCVL

Query:  GLLADEGVHEFPQ
          + ++  +  P+
Subjt:  GLLADEGVHEFPQ

M5W5F3 Reverse transcriptase domain-containing protein (Fragment)1.2e-4234.92Show/hide
Query:  MMARFWWCGVEEDRRIHWA-------TDFLPG----------------------PCPERAILPVLGV----------FGVGNRPSFIWRSLMWGRELLGR
        +MARFWW   ++ R IHW        + F  G                        PE  +  +               VG  PSFIWRSL WG+ELL +
Subjt:  MMARFWWCGVEEDRRIHWA-------TDFLPG----------------------PCPERAILPVLGV----------FGVGNRPSFIWRSLMWGRELLGR

Query:  GTRWRIGNGVRVSVYGSNWVPQDTNLRNVSPMTLLPDARVRDLFTASGQWNEVLIRQHFSPQEARHILSIPLRQVACEDTLIWHFEKSGLYSVRSGYRL-
        G RWR+G+GV + VY   W+P  +  + +SP  L    RV DLFT+SGQWN  L++  F  QE   IL IPL  +A  D LIWH+E++G+YSV+SGYRL 
Subjt:  GTRWRIGNGVRVSVYGSNWVPQDTNLRNVSPMTLLPDARVRDLFTASGQWNEVLIRQHFSPQEARHILSIPLRQVACEDTLIWHFEKSGLYSVRSGYRL-

Query:  GQGPLLAQSPSSSSPELVHRWWNECWSIKIPNKIKIFFWRLL---------------------------GESSLHLFWHCKHTKEMMWSAGFGAI
        G          S+  +L  ++W + W++KIPNKIK F WR                              ES LH  W C+  KE+  ++ +G +
Subjt:  GQGPLLAQSPSSSSPELVHRWWNECWSIKIPNKIKIFFWRLL---------------------------GESSLHLFWHCKHTKEMMWSAGFGAI

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003103.2e-0546.81Show/hide
Query:  VGNRPSFIWRSLMWGRELLGRGTRWRIGNGVRVSVYGSNWVPQDTNL
        VG RPS+ WRS++ GRELL RG    IG+G+   V+   W+  +T L
Subjt:  VGNRPSFIWRSLMWGRELLGRGTRWRIGNGVRVSVYGSNWVPQDTNL

Arabidopsis top hitse value%identityAlignment
AT3G09510.1 Ribonuclease H-like superfamily protein1.0e-1127.38Show/hide
Query:  VGNRPSFIWRSLMWGRELLGRGTRWRIGNGVRVSVYGSNWVPQDTNLRNVSPMTLLPDARVRDLFTASGQ---WNEVLIRQHFSPQEARHILSIPLRQVA
        V  + S+ W SL+ G  LL +GTR  IG+G  + + G + +      R ++      +  + +LF   G    W++  I Q     +   I  I L +  
Subjt:  VGNRPSFIWRSLMWGRELLGRGTRWRIGNGVRVSVYGSNWVPQDTNLRNVSPMTLLPDARVRDLFTASGQ---WNEVLIRQHFSPQEARHILSIPLRQVA

Query:  CEDTLIWHFEKSGLYSVRSGYRLGQGPLLAQSPSSSSPELVHRWWNECWSIKIPNKIKIFFWRLLGES
          D +IW++  +G Y+VRSGY L         P+ + P          W++ I  K+K F WR L ++
Subjt:  CEDTLIWHFEKSGLYSVRSGYRLGQGPLLAQSPSSSSPELVHRWWNECWSIKIPNKIKIFFWRLLGES

AT4G29090.1 Ribonuclease H-like superfamily protein2.5e-1329.14Show/hide
Query:  VGNRPSFIWRSLMWGRELLGRGTRWRIGNGVRVSVYGSNWV---PQDTNLR--NVSPM---TLLPDARVRDLFTASG-QWNEVLIRQHFSPQEARHILSI
        +G+RPSF+W+S+   +E+L +G R  +GNG  + ++   W+   P    LR   V P    ++    +V DL   SG +W + +I   F   E + I  +
Subjt:  VGNRPSFIWRSLMWGRELLGRGTRWRIGNGVRVSVYGSNWV---PQDTNLR--NVSPM---TLLPDARVRDLFTASG-QWNEVLIRQHFSPQEARHILSI

Query:  PLRQVACEDTLIWHFEKSGLYSVRSGY-RLGQGPLLAQSPSSSSPELVHRWWNECWSIKIPNKIKIFFWRLLGES
                D+  W +  SG Y+V+SGY  L Q      SP   S   ++  + + W  +   KI+ F W+ L  S
Subjt:  PLRQVACEDTLIWHFEKSGLYSVRSGY-RLGQGPLLAQSPSSSSPELVHRWWNECWSIKIPNKIKIFFWRLLGES

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.2e-0646.81Show/hide
Query:  VGNRPSFIWRSLMWGRELLGRGTRWRIGNGVRVSVYGSNWVPQDTNL
        VG RPS+ WRS++ GRELL RG    IG+G+   V+   W+  +T L
Subjt:  VGNRPSFIWRSLMWGRELLGRGTRWRIGNGVRVSVYGSNWVPQDTNL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGCAAGGTTTTGGTGGTGTGGGGTGGAGGAGGACAGAAGGATTCACTGGGCAACCGACTTCTTACCTGGCCCGTGTCCTGAAAGGGCGATATTACCCGTTCTCGG
AGTTTTCGGGGTTGGAAATCGCCCTTCCTTTATCTGGAGGAGCCTTATGTGGGGGAGGGAGTTGTTGGGAAGAGGGACCCGGTGGAGGATTGGGAACGGAGTAAGAGTGA
GTGTGTATGGTTCCAACTGGGTGCCCCAGGATACTAATCTGAGGAATGTTTCACCGATGACGCTTCTGCCTGATGCTAGAGTTAGAGATTTGTTCACTGCATCAGGGCAG
TGGAATGAGGTTCTTATCCGGCAACATTTCAGCCCGCAGGAGGCAAGGCACATCCTTTCTATCCCTTTACGCCAGGTTGCTTGTGAGGATACGCTTATTTGGCACTTTGA
GAAGTCTGGCCTCTATTCAGTGAGGAGTGGGTACCGTTTAGGGCAGGGTCCTCTGTTGGCCCAAAGTCCTTCATCCTCATCTCCTGAGTTGGTGCATAGGTGGTGGAATG
AGTGTTGGAGTATAAAGATACCTAACAAGATCAAAATATTTTTCTGGAGACTGTTGGGGGAGTCGAGTCTCCACTTGTTTTGGCATTGTAAGCATACAAAGGAGATGATG
TGGTCGGCAGGTTTTGGGGCTATTGTGTCCAAGTGCGAGGCAGTCGACATTATGGGCGATCTGGAGGGGGATGGACCTGCTGGCGGGAAGTCCAGTCGGGTTGTCTGTAG
GTGGGCGCCGCTGGAGTTTGATGGGTTTAAGGTGAATGTTGATGCAGCGTTTTGCCTGGAGAGAGGAGCGGCGGGTGTAGGCATGGTATGTCGCGATTCCTTGGGGCAGG
CTTGCGGTGGAGACGGCTACAGGCCTTTTGTGCTGGAGACAGATTCTTTGCGTGTGTCCAAGCTACTGCGGCGTGAGGTGGAGGAAGTGTCGGAGTTAAGGATGCTGGTG
GAGGATGCGGTGAGGGGCGCACCAGTGGGGTGGTTTGTCGAAGGCAGCTTTACATTCAGGGAAGGTAACCGTGTTGTCCATCGTTTGGCAAGATTGGCGATGGAAGACAG
GTGTGACCGAGTGTGGATGGAAGAAGGTCCTTCATGTGTTTTGGGCTTGTTGGCGGATGAGGGAGTGCATGAGTTTCCTCAGGCGAGGTCTTTGCTGAAGTTTTTCATGT
TGGTGTCTGTTGGGATCTCTGCTCTCTCTTATGTTTTGTTGATAGTGAAGTATGATATCGTATTTGGTAGGCTTGAAGGCTCTGGTCTGTTTTATGAGCTCAATAGATCT
GTTGTCACCCCGATAGGTGCCCTAGGTTCTGAGAACACCCCTTTTTTGCGCCTTTTAACTTCTTTGCGAGTCCTTAGTGCCAGTGTAGGGGGAAGATGGGTGGACGAGTT
TATAAGCCTTTCTTGGGCTTGTAGGGCTGCTTTAGGCCTAGCGAACGAGGATGGGGGCTGGTTTGTGGTGAAATGGTGCAGGAGGGAGCAGAGCTGGTTGCTAGTTTGGG
TGTTTGATGGTTTTGGTGTAATGGGTTTTGTCAGCGGTGTAATAGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGGCAAGGTTTTGGTGGTGTGGGGTGGAGGAGGACAGAAGGATTCACTGGGCAACCGACTTCTTACCTGGCCCGTGTCCTGAAAGGGCGATATTACCCGTTCTCGG
AGTTTTCGGGGTTGGAAATCGCCCTTCCTTTATCTGGAGGAGCCTTATGTGGGGGAGGGAGTTGTTGGGAAGAGGGACCCGGTGGAGGATTGGGAACGGAGTAAGAGTGA
GTGTGTATGGTTCCAACTGGGTGCCCCAGGATACTAATCTGAGGAATGTTTCACCGATGACGCTTCTGCCTGATGCTAGAGTTAGAGATTTGTTCACTGCATCAGGGCAG
TGGAATGAGGTTCTTATCCGGCAACATTTCAGCCCGCAGGAGGCAAGGCACATCCTTTCTATCCCTTTACGCCAGGTTGCTTGTGAGGATACGCTTATTTGGCACTTTGA
GAAGTCTGGCCTCTATTCAGTGAGGAGTGGGTACCGTTTAGGGCAGGGTCCTCTGTTGGCCCAAAGTCCTTCATCCTCATCTCCTGAGTTGGTGCATAGGTGGTGGAATG
AGTGTTGGAGTATAAAGATACCTAACAAGATCAAAATATTTTTCTGGAGACTGTTGGGGGAGTCGAGTCTCCACTTGTTTTGGCATTGTAAGCATACAAAGGAGATGATG
TGGTCGGCAGGTTTTGGGGCTATTGTGTCCAAGTGCGAGGCAGTCGACATTATGGGCGATCTGGAGGGGGATGGACCTGCTGGCGGGAAGTCCAGTCGGGTTGTCTGTAG
GTGGGCGCCGCTGGAGTTTGATGGGTTTAAGGTGAATGTTGATGCAGCGTTTTGCCTGGAGAGAGGAGCGGCGGGTGTAGGCATGGTATGTCGCGATTCCTTGGGGCAGG
CTTGCGGTGGAGACGGCTACAGGCCTTTTGTGCTGGAGACAGATTCTTTGCGTGTGTCCAAGCTACTGCGGCGTGAGGTGGAGGAAGTGTCGGAGTTAAGGATGCTGGTG
GAGGATGCGGTGAGGGGCGCACCAGTGGGGTGGTTTGTCGAAGGCAGCTTTACATTCAGGGAAGGTAACCGTGTTGTCCATCGTTTGGCAAGATTGGCGATGGAAGACAG
GTGTGACCGAGTGTGGATGGAAGAAGGTCCTTCATGTGTTTTGGGCTTGTTGGCGGATGAGGGAGTGCATGAGTTTCCTCAGGCGAGGTCTTTGCTGAAGTTTTTCATGT
TGGTGTCTGTTGGGATCTCTGCTCTCTCTTATGTTTTGTTGATAGTGAAGTATGATATCGTATTTGGTAGGCTTGAAGGCTCTGGTCTGTTTTATGAGCTCAATAGATCT
GTTGTCACCCCGATAGGTGCCCTAGGTTCTGAGAACACCCCTTTTTTGCGCCTTTTAACTTCTTTGCGAGTCCTTAGTGCCAGTGTAGGGGGAAGATGGGTGGACGAGTT
TATAAGCCTTTCTTGGGCTTGTAGGGCTGCTTTAGGCCTAGCGAACGAGGATGGGGGCTGGTTTGTGGTGAAATGGTGCAGGAGGGAGCAGAGCTGGTTGCTAGTTTGGG
TGTTTGATGGTTTTGGTGTAATGGGTTTTGTCAGCGGTGTAATAGTTTAG
Protein sequenceShow/hide protein sequence
MMARFWWCGVEEDRRIHWATDFLPGPCPERAILPVLGVFGVGNRPSFIWRSLMWGRELLGRGTRWRIGNGVRVSVYGSNWVPQDTNLRNVSPMTLLPDARVRDLFTASGQ
WNEVLIRQHFSPQEARHILSIPLRQVACEDTLIWHFEKSGLYSVRSGYRLGQGPLLAQSPSSSSPELVHRWWNECWSIKIPNKIKIFFWRLLGESSLHLFWHCKHTKEMM
WSAGFGAIVSKCEAVDIMGDLEGDGPAGGKSSRVVCRWAPLEFDGFKVNVDAAFCLERGAAGVGMVCRDSLGQACGGDGYRPFVLETDSLRVSKLLRREVEEVSELRMLV
EDAVRGAPVGWFVEGSFTFREGNRVVHRLARLAMEDRCDRVWMEEGPSCVLGLLADEGVHEFPQARSLLKFFMLVSVGISALSYVLLIVKYDIVFGRLEGSGLFYELNRS
VVTPIGALGSENTPFLRLLTSLRVLSASVGGRWVDEFISLSWACRAALGLANEDGGWFVVKWCRREQSWLLVWVFDGFGVMGFVSGVIV