CuGenDBv2

Gene ID	Lag0008948
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	ACT11D09.5
Genome location	chr9:32902302..32903508
RNA-Seq Expression	Lag0008948
Synteny	Lag0008948
Gene Ontology terms	GO:0000398 - mRNA splicing, via spliceosome (biological process) GO:0035196 - production of miRNAs involved in gene silencing by miRNA (biological process) GO:1903730 - regulation of phosphatidate phosphatase activity (biological process) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR039292 - Protein SICKLE

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0043023.1 ACT11D09.5 [Cucumis melo var. makuwa]

5.9e-39

79.25

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Query:  MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSATMVGQSEPCTAPRFDYYTNPMSAFSAGKKRGKIEDQTGSDNYVPSHHNNSPATYVP
        MEESEKRRERLRAMRMEAAQADV NY+ETSLPNHLSNPL+ESSATMVGQ  PCTAPRFDYYTNPM+AFS  KK+GKIE+Q  SD +VP HHN S  TY+P
Subjt:  MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSATMVGQSEPCTAPRFDYYTNPMSAFSAGKKRGKIEDQTGSDNYVPSHHNNSPATYVP

Query:  SNFPDL
          FP L
Subjt:  SNFPDL

XP_004148098.1 protein SICKLE [Cucumis sativus]

1.2e-39

83.65

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Query:  MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSATMVGQSEPCTAPRFDYYTNPMSAFSAGKKRGKIEDQTGSDNYVPSHHNNSPATYVP
        MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSATMVGQ  PCTAPRFDYYTNPM+AFS  KK+GKIE+Q  SDN+VP HHN S  TY P
Subjt:  MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSATMVGQSEPCTAPRFDYYTNPMSAFSAGKKRGKIEDQTGSDNYVPSHHNNSPATYVP

Query:  SNFP
          FP
Subjt:  SNFP

XP_008459151.1 PREDICTED: uncharacterized protein LOC103498353 [Cucumis melo]

4.5e-39

80.19

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Query:  MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSATMVGQSEPCTAPRFDYYTNPMSAFSAGKKRGKIEDQTGSDNYVPSHHNNSPATYVP
        MEESEKRRERLRAMRMEAAQADV NY+ETSLPNHLSNPLVESSATMVGQ  PCTAPRFDYYTNPM+AFS  KK+GKIE+Q  SD +VP HHN S  TY+P
Subjt:  MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSATMVGQSEPCTAPRFDYYTNPMSAFSAGKKRGKIEDQTGSDNYVPSHHNNSPATYVP

Query:  SNFPDL
          FP L
Subjt:  SNFPDL

XP_022947209.1 protein SICKLE isoform X2 [Cucurbita moschata]

2.2e-38

76.72

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Query:  MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSATMVGQSEPCTAPRFDYYTNPMSAFSAGKKRGKIEDQTGSDNYVPSHHNNSPATYVP
        MEESEKRRERLRAMRMEA+QADVANY+ETSLPNHLSNPLVESSA M+GQSEPCTAPRFDYYTNPM+AFS+ KKRG   +QT S +YVPSH N+SP  YVP
Subjt:  MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSATMVGQSEPCTAPRFDYYTNPMSAFSAGKKRGKIEDQTGSDNYVPSHHNNSPATYVP

Query:  SNFPDL---EMAVEMP
        SNFP +   EM+   P
Subjt:  SNFPDL---EMAVEMP

XP_038902109.1 protein SICKLE [Benincasa hispida]

1.7e-38

81.13

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Query:  MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSATMVGQSEPCTAPRFDYYTNPMSAFSAGKKRGKIEDQTGSDNYVPSHHNNSPATYVP
        MEESEKRRERLRAMRMEAAQADVANYVETSLP+HLSNPLVESS TM+GQ  PCTAPRFDYYTNPM+AFS  KKR KIE+Q  SDNYVP HHN S ATY+P
Subjt:  MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSATMVGQSEPCTAPRFDYYTNPMSAFSAGKKRGKIEDQTGSDNYVPSHHNNSPATYVP

Query:  SNFPDL
         N   L
Subjt:  SNFPDL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LQW8 Uncharacterized protein

5.7e-40

83.65

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Query:  MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSATMVGQSEPCTAPRFDYYTNPMSAFSAGKKRGKIEDQTGSDNYVPSHHNNSPATYVP
        MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSATMVGQ  PCTAPRFDYYTNPM+AFS  KK+GKIE+Q  SDN+VP HHN S  TY P
Subjt:  MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSATMVGQSEPCTAPRFDYYTNPMSAFSAGKKRGKIEDQTGSDNYVPSHHNNSPATYVP

Query:  SNFP
          FP
Subjt:  SNFP

A0A1S3CA20 uncharacterized protein LOC103498353

2.2e-39

80.19

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Query:  MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSATMVGQSEPCTAPRFDYYTNPMSAFSAGKKRGKIEDQTGSDNYVPSHHNNSPATYVP
        MEESEKRRERLRAMRMEAAQADV NY+ETSLPNHLSNPLVESSATMVGQ  PCTAPRFDYYTNPM+AFS  KK+GKIE+Q  SD +VP HHN S  TY+P
Subjt:  MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSATMVGQSEPCTAPRFDYYTNPMSAFSAGKKRGKIEDQTGSDNYVPSHHNNSPATYVP

Query:  SNFPDL
          FP L
Subjt:  SNFPDL

A0A5A7TI61 ACT11D09.5

2.8e-39

79.25

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Query:  MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSATMVGQSEPCTAPRFDYYTNPMSAFSAGKKRGKIEDQTGSDNYVPSHHNNSPATYVP
        MEESEKRRERLRAMRMEAAQADV NY+ETSLPNHLSNPL+ESSATMVGQ  PCTAPRFDYYTNPM+AFS  KK+GKIE+Q  SD +VP HHN S  TY+P
Subjt:  MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSATMVGQSEPCTAPRFDYYTNPMSAFSAGKKRGKIEDQTGSDNYVPSHHNNSPATYVP

Query:  SNFPDL
          FP L
Subjt:  SNFPDL

A0A5D3C828 ACT11D09.5

2.2e-39

80.19

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Query:  MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSATMVGQSEPCTAPRFDYYTNPMSAFSAGKKRGKIEDQTGSDNYVPSHHNNSPATYVP
        MEESEKRRERLRAMRMEAAQADV NY+ETSLPNHLSNPLVESSATMVGQ  PCTAPRFDYYTNPM+AFS  KK+GKIE+Q  SD +VP HHN S  TY+P
Subjt:  MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSATMVGQSEPCTAPRFDYYTNPMSAFSAGKKRGKIEDQTGSDNYVPSHHNNSPATYVP

Query:  SNFPDL
          FP L
Subjt:  SNFPDL

A0A6J1G649 protein SICKLE isoform X2

1.1e-38

76.72

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Query:  MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSATMVGQSEPCTAPRFDYYTNPMSAFSAGKKRGKIEDQTGSDNYVPSHHNNSPATYVP
        MEESEKRRERLRAMRMEA+QADVANY+ETSLPNHLSNPLVESSA M+GQSEPCTAPRFDYYTNPM+AFS+ KKRG   +QT S +YVPSH N+SP  YVP
Subjt:  MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSATMVGQSEPCTAPRFDYYTNPMSAFSAGKKRGKIEDQTGSDNYVPSHHNNSPATYVP

Query:  SNFPDL---EMAVEMP
        SNFP +   EM+   P
Subjt:  SNFPDL---EMAVEMP

SwissProt top hits

e value

%identity

Alignment

Q9SB47 Protein SICKLE

5.4e-11

45.45

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Query:  MEESEKRRERLRAMRMEAA---QADVANYVETSL-PNHLSNPLVESSATMVGQSEPCTAPRFDYYTNPMSAFSAGKKRGKIEDQTGSDNYV--PSHHNNS
        ME+SEKR++ L+AMRMEAA     D     ETS+   HLSNPL E+S     Q +     RFDYYT+PM+A+S+ KK     ++T    Y+  PSH  +S
Subjt:  MEESEKRRERLRAMRMEAA---QADVANYVETSL-PNHLSNPLVESSATMVGQSEPCTAPRFDYYTNPMSAFSAGKKRGKIEDQTGSDNYV--PSHHNNS

Query:  PATYVPSNFP
        P   VP  FP
Subjt:  PATYVPSNFP

Arabidopsis top hits

e value

%identity

Alignment

AT4G24500.1 hydroxyproline-rich glycoprotein family protein

3.8e-12

45.45

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Query:  MEESEKRRERLRAMRMEAA---QADVANYVETSL-PNHLSNPLVESSATMVGQSEPCTAPRFDYYTNPMSAFSAGKKRGKIEDQTGSDNYV--PSHHNNS
        ME+SEKR++ L+AMRMEAA     D     ETS+   HLSNPL E+S     Q +     RFDYYT+PM+A+S+ KK     ++T    Y+  PSH  +S
Subjt:  MEESEKRRERLRAMRMEAA---QADVANYVETSL-PNHLSNPLVESSATMVGQSEPCTAPRFDYYTNPMSAFSAGKKRGKIEDQTGSDNYV--PSHHNNS

Query:  PATYVPSNFP
        P   VP  FP
Subjt:  PATYVPSNFP

AT4G24500.3 hydroxyproline-rich glycoprotein family protein

3.8e-12

45.45

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Query:  MEESEKRRERLRAMRMEAA---QADVANYVETSL-PNHLSNPLVESSATMVGQSEPCTAPRFDYYTNPMSAFSAGKKRGKIEDQTGSDNYV--PSHHNNS
        ME+SEKR++ L+AMRMEAA     D     ETS+   HLSNPL E+S     Q +     RFDYYT+PM+A+S+ KK     ++T    Y+  PSH  +S
Subjt:  MEESEKRRERLRAMRMEAA---QADVANYVETSL-PNHLSNPLVESSATMVGQSEPCTAPRFDYYTNPMSAFSAGKKRGKIEDQTGSDNYV--PSHHNNS

Query:  PATYVPSNFP
        P   VP  FP
Subjt:  PATYVPSNFP

Sequences

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CDS sequence

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ATGGAAGAATCTGAGAAACGAAGGGAGAGACTGAGAGCAATGCGAATGGAAGCTGCTCAGGCTGATGTCGCTAATTATGTCGAAACTTCTCTGCCTAATCATCTTTCCAA
TCCATTGGTCGAGTCCTCAGCTACCATGGTAGGCCAATCAGAACCATGTACTGCCCCAAGATTTGATTATTACACAAACCCTATGTCTGCATTTTCTGCTGGTAAGAAGA
GAGGGAAGATTGAGGATCAGACTGGATCAGATAATTATGTTCCTTCCCACCACAATAATTCTCCTGCAACTTATGTTCCATCAAATTTTCCAGATTTAGAAATGGCTGTA
GAGATGCCATTAGGAATAGGAAATGCTTTTGTTTATGAACAAAAGAGCCTGCTCATGGAGCAGTGCAGAAACAAACCAGAGTCCTCAAGATTAGCTTATGTATCCTCTCT
ACTACTCTGA

mRNA sequence

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Protein sequence

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MEESEKRRERLRAMRMEAAQADVANYVETSLPNHLSNPLVESSATMVGQSEPCTAPRFDYYTNPMSAFSAGKKRGKIEDQTGSDNYVPSHHNNSPATYVPSNFPDLEMAV
EMPLGIGNAFVYEQKSLLMEQCRNKPESSRLAYVSSLLL

Lag0008948 (gene) of Sponge gourd (AG-4) v1 genome