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Lag0008959 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008959
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr9:33091423..33092342
RNA-Seq ExpressionLag0008959
SyntenyLag0008959
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3581626.1 hypothetical protein DY000_02035364 [Brassica cretica]2.6e-0941.25Show/hide
Query:  SGQWDVFKLRQTLWEDDVQEILHIPISRSAPDKWIWHYDKHGMYSVKSGYKLVSESTDHALFHCSRAKENNVLHNRAIPP
        +G+W+V ++ Q +  +DV  +L  P+SRS  DK +W + + G Y+ +SGYKL+ E+  HALFHC  AKE     +  +PP
Subjt:  SGQWDVFKLRQTLWEDDVQEILHIPISRSAPDKWIWHYDKHGMYSVKSGYKLVSESTDHALFHCSRAKENNVLHNRAIPP

ONI01138.1 hypothetical protein PRUPE_6G123900 [Prunus persica]2.8e-0847.76Show/hide
Query:  RVSDYVSPSGQWDVFKLRQTLWEDDVQEILHIPI-SRSAPDKWIWHYDKHGMYSVKSGYKLVSESTD
        RV D  + SGQW+V  L+   W+ +V  IL IP+ S +  D  IWHY+++GMYSVKSGY+L     D
Subjt:  RVSDYVSPSGQWDVFKLRQTLWEDDVQEILHIPI-SRSAPDKWIWHYDKHGMYSVKSGYKLVSESTD

ONI09819.1 hypothetical protein PRUPE_4G011200 [Prunus persica]3.7e-0847.76Show/hide
Query:  RVSDYVSPSGQWDVFKLRQTLWEDDVQEILHIPI-SRSAPDKWIWHYDKHGMYSVKSGYKLVSESTD
        RV D  + SGQW+V  L+   W+ +V  IL IP+ S +  D  IWHY+++GMYSVKSGY+L     D
Subjt:  RVSDYVSPSGQWDVFKLRQTLWEDDVQEILHIPI-SRSAPDKWIWHYDKHGMYSVKSGYKLVSESTD

RVX23370.1 hypothetical protein CK203_000622 [Vitis vinifera]2.2e-0829.21Show/hide
Query:  MRVSD-YVSPSGQWDVFKLRQTLWEDDVQEILHIPI-SRSAPDKWIWHYDKHGMYSVKSGYKLVSESTDHALFHCSRAKENNVLHNRAIPPIDIRCEWIS
        ++V D ++    +WDV  LR      D Q I  IP+ S+S PD  IWH+D HG Y VKSGY++    + H     SR    N+L + +IPP         
Subjt:  MRVSD-YVSPSGQWDVFKLRQTLWEDDVQEILHIPI-SRSAPDKWIWHYDKHGMYSVKSGYKLVSESTDHALFHCSRAKENNVLHNRAIPPIDIRCEWIS

Query:  SYLTEFLGAQQKQGRNVQSNHDVQELILQDIDVAACDPRHRCCGIGIVLRNKMGVLQVAQNQRSTTYNSPLCAEAVAV
                         ++N+ V  ++++D+ +    P H+  G+G++LRN+ G +    ++     +SP  AEA+ +
Subjt:  SYLTEFLGAQQKQGRNVQSNHDVQELILQDIDVAACDPRHRCCGIGIVLRNKMGVLQVAQNQRSTTYNSPLCAEAVAV

XP_040248755.1 uncharacterized protein LOC120966579 [Aegilops tauschii subsp. strangulata]6.3e-0844.62Show/hide
Query:  RVSDYVSP-SGQWDVFKLRQTLWEDDVQEILHIPISRSAPDKWIWHYDKHGMYSVKSGYKLVSES
        RVS+ ++P + QWD   ++QT W +D   IL IPI     D   WHYDK G++SVKS Y++V ++
Subjt:  RVSDYVSP-SGQWDVFKLRQTLWEDDVQEILHIPISRSAPDKWIWHYDKHGMYSVKSGYKLVSES

TrEMBL top hitse value%identityAlignment
A0A251NPF0 Reverse transcriptase domain-containing protein1.4e-0847.76Show/hide
Query:  RVSDYVSPSGQWDVFKLRQTLWEDDVQEILHIPI-SRSAPDKWIWHYDKHGMYSVKSGYKLVSESTD
        RV D  + SGQW+V  L+   W+ +V  IL IP+ S +  D  IWHY+++GMYSVKSGY+L     D
Subjt:  RVSDYVSPSGQWDVFKLRQTLWEDDVQEILHIPI-SRSAPDKWIWHYDKHGMYSVKSGYKLVSESTD

A0A3N6TG88 RNase H domain-containing protein1.2e-0941.25Show/hide
Query:  SGQWDVFKLRQTLWEDDVQEILHIPISRSAPDKWIWHYDKHGMYSVKSGYKLVSESTDHALFHCSRAKENNVLHNRAIPP
        +G+W+V ++ Q +  +DV  +L  P+SRS  DK +W + + G Y+ +SGYKL+ E+  HALFHC  AKE     +  +PP
Subjt:  SGQWDVFKLRQTLWEDDVQEILHIPISRSAPDKWIWHYDKHGMYSVKSGYKLVSESTDHALFHCSRAKENNVLHNRAIPP

A0A438KQ76 RNase H domain-containing protein1.1e-0829.21Show/hide
Query:  MRVSD-YVSPSGQWDVFKLRQTLWEDDVQEILHIPI-SRSAPDKWIWHYDKHGMYSVKSGYKLVSESTDHALFHCSRAKENNVLHNRAIPPIDIRCEWIS
        ++V D ++    +WDV  LR      D Q I  IP+ S+S PD  IWH+D HG Y VKSGY++    + H     SR    N+L + +IPP         
Subjt:  MRVSD-YVSPSGQWDVFKLRQTLWEDDVQEILHIPI-SRSAPDKWIWHYDKHGMYSVKSGYKLVSESTDHALFHCSRAKENNVLHNRAIPPIDIRCEWIS

Query:  SYLTEFLGAQQKQGRNVQSNHDVQELILQDIDVAACDPRHRCCGIGIVLRNKMGVLQVAQNQRSTTYNSPLCAEAVAV
                         ++N+ V  ++++D+ +    P H+  G+G++LRN+ G +    ++     +SP  AEA+ +
Subjt:  SYLTEFLGAQQKQGRNVQSNHDVQELILQDIDVAACDPRHRCCGIGIVLRNKMGVLQVAQNQRSTTYNSPLCAEAVAV

A0A803QFP1 Uncharacterized protein1.4e-0848.39Show/hide
Query:  RVSDYVSPSGQWDVFKLRQTLWEDDVQEILHIPISRSAP-DKWIWHYDKHGMYSVKSGYKLV
        RV ++++P G WDVF+L +      V+ IL I ++R    D W WHYDK G+Y+VKSGY LV
Subjt:  RVSDYVSPSGQWDVFKLRQTLWEDDVQEILHIPISRSAP-DKWIWHYDKHGMYSVKSGYKLV

M5W5F3 Reverse transcriptase domain-containing protein (Fragment)1.4e-0847.76Show/hide
Query:  RVSDYVSPSGQWDVFKLRQTLWEDDVQEILHIPI-SRSAPDKWIWHYDKHGMYSVKSGYKLVSESTD
        RV D  + SGQW+V  L+   W+ +V  IL IP+ S +  D  IWHY+++GMYSVKSGY+L     D
Subjt:  RVSDYVSPSGQWDVFKLRQTLWEDDVQEILHIPI-SRSAPDKWIWHYDKHGMYSVKSGYKLVSESTD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTGTTTCAGATTATGTTTCACCTTCAGGTCAATGGGATGTATTTAAGTTAAGACAGACATTATGGGAAGACGATGTTCAGGAAATCCTGCATATTCCAATCAGCAG
AAGCGCGCCAGATAAGTGGATCTGGCATTATGACAAACATGGAATGTATTCTGTCAAAAGTGGGTACAAGTTGGTGTCTGAGTCTACTGATCATGCGCTCTTCCATTGTT
CAAGGGCAAAAGAGAACAATGTTCTTCACAATCGTGCTATTCCTCCAATTGATATTCGATGTGAATGGATTTCTTCATATCTGACTGAGTTTCTGGGTGCTCAACAAAAG
CAAGGACGTAATGTTCAATCGAACCATGATGTTCAGGAATTGATTTTACAAGACATAGATGTTGCGGCATGTGATCCCAGGCATAGATGTTGCGGCATTGGAATTGTCCT
TCGCAACAAGATGGGCGTGTTGCAGGTTGCTCAAAATCAAAGATCAACAACCTACAATTCACCGTTGTGTGCGGAGGCGGTGGCAGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGTGTTTCAGATTATGTTTCACCTTCAGGTCAATGGGATGTATTTAAGTTAAGACAGACATTATGGGAAGACGATGTTCAGGAAATCCTGCATATTCCAATCAGCAG
AAGCGCGCCAGATAAGTGGATCTGGCATTATGACAAACATGGAATGTATTCTGTCAAAAGTGGGTACAAGTTGGTGTCTGAGTCTACTGATCATGCGCTCTTCCATTGTT
CAAGGGCAAAAGAGAACAATGTTCTTCACAATCGTGCTATTCCTCCAATTGATATTCGATGTGAATGGATTTCTTCATATCTGACTGAGTTTCTGGGTGCTCAACAAAAG
CAAGGACGTAATGTTCAATCGAACCATGATGTTCAGGAATTGATTTTACAAGACATAGATGTTGCGGCATGTGATCCCAGGCATAGATGTTGCGGCATTGGAATTGTCCT
TCGCAACAAGATGGGCGTGTTGCAGGTTGCTCAAAATCAAAGATCAACAACCTACAATTCACCGTTGTGTGCGGAGGCGGTGGCAGTCTGA
Protein sequenceShow/hide protein sequence
MRVSDYVSPSGQWDVFKLRQTLWEDDVQEILHIPISRSAPDKWIWHYDKHGMYSVKSGYKLVSESTDHALFHCSRAKENNVLHNRAIPPIDIRCEWISSYLTEFLGAQQK
QGRNVQSNHDVQELILQDIDVAACDPRHRCCGIGIVLRNKMGVLQVAQNQRSTTYNSPLCAEAVAV