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Lag0008962 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008962
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr9:33106728..33107176
RNA-Seq ExpressionLag0008962
SyntenyLag0008962
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1227304.1 hypothetical protein CJ030_MR1G016838 [Morella rubra]1.6e-0744.29Show/hide
Query:  QSGKSLCDYITRFNEEALQVEGYSERPALVAIIAELEDERLLNSIGKIQPCTYAEFVSRAHKYMRAKELL
        + G+SL DY+ RFN+E L VE   ++  L AI+A L D R   S+GK  P T+ EF+ +A KYM A++++
Subjt:  QSGKSLCDYITRFNEEALQVEGYSERPALVAIIAELEDERLLNSIGKIQPCTYAEFVSRAHKYMRAKELL

XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]2.1e-0750.77Show/hide
Query:  KSLCDYITRFNEEALQVEGYSERPALVAIIAELEDERLLNSIGKIQPCTYAEFVSRAHKYMRAKE
        +SL DY+TRFN+E LQVEG ++  +L+A I  + DE L  S GK  P T++E +SRA +YM A E
Subjt:  KSLCDYITRFNEEALQVEGYSERPALVAIIAELEDERLLNSIGKIQPCTYAEFVSRAHKYMRAKE

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]5.5e-0850.77Show/hide
Query:  KSLCDYITRFNEEALQVEGYSERPALVAIIAELEDERLLNSIGKIQPCTYAEFVSRAHKYMRAKE
        +SL DY+ RFNEE LQVEG +   +L+A ++++ DE L  S GK  P T++E +SRA KYM A E
Subjt:  KSLCDYITRFNEEALQVEGYSERPALVAIIAELEDERLLNSIGKIQPCTYAEFVSRAHKYMRAKE

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]2.9e-0952.24Show/hide
Query:  KSLCDYITRFNEEALQVEGYSERPALVAIIAELEDERLLNSIGKIQPCTYAEFVSRAHKYMRAKELL
        +SL +Y+ RFNEE LQVEG ++  AL+A ++ ++DERL+ S GK  P T+ E +SRA KYM A EL+
Subjt:  KSLCDYITRFNEEALQVEGYSERPALVAIIAELEDERLLNSIGKIQPCTYAEFVSRAHKYMRAKELL

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]4.7e-0749.23Show/hide
Query:  KSLCDYITRFNEEALQVEGYSERPALVAIIAELEDERLLNSIGKIQPCTYAEFVSRAHKYMRAKE
        +SL DY+ RFNEE LQVEG ++  +L+A ++ + DE L  S GK  P T++E +SRA +YM A E
Subjt:  KSLCDYITRFNEEALQVEGYSERPALVAIIAELEDERLLNSIGKIQPCTYAEFVSRAHKYMRAKE

TrEMBL top hitse value%identityAlignment
A0A6A1WQ72 Uncharacterized protein7.8e-0844.29Show/hide
Query:  QSGKSLCDYITRFNEEALQVEGYSERPALVAIIAELEDERLLNSIGKIQPCTYAEFVSRAHKYMRAKELL
        + G+SL DY+ RFN+E L VE   ++  L AI+A L D R   S+GK  P T+ EF+ +A KYM A++++
Subjt:  QSGKSLCDYITRFNEEALQVEGYSERPALVAIIAELEDERLLNSIGKIQPCTYAEFVSRAHKYMRAKELL

A0A6J1CNT2 uncharacterized protein LOC1110128051.0e-0750.77Show/hide
Query:  KSLCDYITRFNEEALQVEGYSERPALVAIIAELEDERLLNSIGKIQPCTYAEFVSRAHKYMRAKE
        +SL DY+TRFN+E LQVEG ++  +L+A I  + DE L  S GK  P T++E +SRA +YM A E
Subjt:  KSLCDYITRFNEEALQVEGYSERPALVAIIAELEDERLLNSIGKIQPCTYAEFVSRAHKYMRAKE

A0A6J1D7D2 uncharacterized protein LOC1110183072.7e-0850.77Show/hide
Query:  KSLCDYITRFNEEALQVEGYSERPALVAIIAELEDERLLNSIGKIQPCTYAEFVSRAHKYMRAKE
        +SL DY+ RFNEE LQVEG +   +L+A ++++ DE L  S GK  P T++E +SRA KYM A E
Subjt:  KSLCDYITRFNEEALQVEGYSERPALVAIIAELEDERLLNSIGKIQPCTYAEFVSRAHKYMRAKE

A0A6J1DWY0 uncharacterized protein LOC1110252932.3e-0749.23Show/hide
Query:  KSLCDYITRFNEEALQVEGYSERPALVAIIAELEDERLLNSIGKIQPCTYAEFVSRAHKYMRAKE
        +SL DY+ RFNEE LQVEG ++  +L+A ++ + DE L  S GK  P T++E +SRA +YM A E
Subjt:  KSLCDYITRFNEEALQVEGYSERPALVAIIAELEDERLLNSIGKIQPCTYAEFVSRAHKYMRAKE

A0A6J1DZ49 uncharacterized protein LOC1110248511.4e-0952.24Show/hide
Query:  KSLCDYITRFNEEALQVEGYSERPALVAIIAELEDERLLNSIGKIQPCTYAEFVSRAHKYMRAKELL
        +SL +Y+ RFNEE LQVEG ++  AL+A ++ ++DERL+ S GK  P T+ E +SRA KYM A EL+
Subjt:  KSLCDYITRFNEEALQVEGYSERPALVAIIAELEDERLLNSIGKIQPCTYAEFVSRAHKYMRAKELL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCGGTCCCAATCACGCTTCCGCTTTATCGGAATTAGGGAATTCCAAATCCTTCAATCAGGTAAGAGCTTGTGTGATTATATAACACGTTTTAACGAGGAAGCACT
GCAGGTTGAGGGATACAGTGAGAGACCAGCCCTAGTAGCCATCATAGCCGAACTGGAGGACGAGAGGTTACTGAATTCAATAGGTAAAATCCAACCTTGCACTTACGCTG
AGTTTGTCTCCCGAGCACATAAATACATGCGTGCAAAGGAGTTGCTCAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATCGGTCCCAATCACGCTTCCGCTTTATCGGAATTAGGGAATTCCAAATCCTTCAATCAGGTAAGAGCTTGTGTGATTATATAACACGTTTTAACGAGGAAGCACT
GCAGGTTGAGGGATACAGTGAGAGACCAGCCCTAGTAGCCATCATAGCCGAACTGGAGGACGAGAGGTTACTGAATTCAATAGGTAAAATCCAACCTTGCACTTACGCTG
AGTTTGTCTCCCGAGCACATAAATACATGCGTGCAAAGGAGTTGCTCAAGTAA
Protein sequenceShow/hide protein sequence
MNRSQSRFRFIGIREFQILQSGKSLCDYITRFNEEALQVEGYSERPALVAIIAELEDERLLNSIGKIQPCTYAEFVSRAHKYMRAKELLK