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Lag0008980 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008980
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr9:33308403..33309071
RNA-Seq ExpressionLag0008980
SyntenyLag0008980
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFS33695.1 hypothetical protein Acr_00g0030110 [Actinidia rufa]3.3e-1836.99Show/hide
Query:  MGWIYSSLNEDKLGEIIGYSSAYEIWEHLRTIYESFSTARIMALCSQLQKIRKDGLTVTQYLSQIKDIAEKFSAIGEPLSYRDHL---------------
        M WIY+S+NE  LG+I+GY+SA +IWE L  +Y + S A +  L + LQ I+KDGLT   Y+ + + +    ++IGEP++Y DHL               
Subjt:  MGWIYSSLNEDKLGEIIGYSSAYEIWEHLRTIYESFSTARIMALCSQLQKIRKDGLTVTQYLSQIKDIAEKFSAIGEPLSYRDHL---------------

Query:  ----------------ALMLAYETCLEKQSSVDSLNLVQANLANFS
                        +L+L+Y+  LE+QS+ D+L+ +QANLAN +
Subjt:  ----------------ALMLAYETCLEKQSSVDSLNLVQANLANFS

GFY82848.1 hypothetical protein Acr_02g0010880 [Actinidia rufa]3.3e-1836.99Show/hide
Query:  MGWIYSSLNEDKLGEIIGYSSAYEIWEHLRTIYESFSTARIMALCSQLQKIRKDGLTVTQYLSQIKDIAEKFSAIGEPLSYRDHL---------------
        M WIY+S+NE  LG+I+GY+SA +IWE L  +Y + S A +  L + LQ I+KDGLT   Y+ + + +    ++IGEP++Y DHL               
Subjt:  MGWIYSSLNEDKLGEIIGYSSAYEIWEHLRTIYESFSTARIMALCSQLQKIRKDGLTVTQYLSQIKDIAEKFSAIGEPLSYRDHL---------------

Query:  ----------------ALMLAYETCLEKQSSVDSLNLVQANLANFS
                        +L+L+Y+  LE+QS+ D+L+ +QANLAN +
Subjt:  ----------------ALMLAYETCLEKQSSVDSLNLVQANLANFS

PON47862.1 hypothetical protein TorRG33x02_321990 [Trema orientale]2.5e-1838.1Show/hide
Query:  MGWIYSSLNEDKLGEIIGYSSAYEIWEHLRTIYESFSTARIMALCSQLQKIRKDGLTVTQYLSQIKDIAEKFSAIGEPLSYRDHL---------------
        M WIY+SL +  +G+I+GY+SA+EIWE L  IY S S A+I  L ++LQ +RKDGLT  +Y+ + K+I    +A+GEP+S +DHL               
Subjt:  MGWIYSSLNEDKLGEIIGYSSAYEIWEHLRTIYESFSTARIMALCSQLQKIRKDGLTVTQYLSQIKDIAEKFSAIGEPLSYRDHL---------------

Query:  ----------------ALMLAYETCLEKQSSVDSLNLVQANLANFSL
                        +L+L+YE  LE Q++   L+ +QANLA+ ++
Subjt:  ----------------ALMLAYETCLEKQSSVDSLNLVQANLANFSL

XP_022155181.1 uncharacterized protein LOC111022315 [Momordica charantia]2.4e-2944Show/hide
Query:  MGWIYSSLNEDKLGEIIGYSSAYEIWEHLRTIYESFSTARIMALCSQLQKIRKDGLTVTQYLSQIKDIAEKFSAIGEPLSYRDHLA--------------
        M WIYSSL+E+K+GE++   + ++IW  L  +Y+S +TARIM L ++LQ +RKDG +V+QYL++IK+IA+KF+A+GEPLSYRDHLA              
Subjt:  MGWIYSSLNEDKLGEIIGYSSAYEIWEHLRTIYESFSTARIMALCSQLQKIRKDGLTVTQYLSQIKDIAEKFSAIGEPLSYRDHLA--------------

Query:  -----------------LMLAYETCLEKQSSVDSLNLVQANLANFSLPSSRCSLVHNNFLNLTKLPSPPLIFPSH
                         L+LAYE  L+KQ++VD LN+ QANL N SL        HN     +K P P   FP+H
Subjt:  -----------------LMLAYETCLEKQSSVDSLNLVQANLANFSLPSSRCSLVHNNFLNLTKLPSPPLIFPSH

XP_038887133.1 uncharacterized protein LOC120077323 [Benincasa hispida]1.5e-2649.64Show/hide
Query:  LGEIIGYSSAYEIWEHLRTIYESFSTARIMALCSQLQKIRKDGLTVTQYLSQIKDIAEKFSAIGEPLSYRDHLA--------------------------
        +GEI+GY SA++IWE LRT+YES S A IM  CSQLQKI+KDGLTV+QYL+QIKD+ + F+AIGEPLSYRDHL+                          
Subjt:  LGEIIGYSSAYEIWEHLRTIYESFSTARIMALCSQLQKIRKDGLTVTQYLSQIKDIAEKFSAIGEPLSYRDHLA--------------------------

Query:  -----LMLAYETCLEKQSSVDSLNLVQANLANFSLPS
             L++ Y++ LEKQ++ D L L+QAN+A+ S+ S
Subjt:  -----LMLAYETCLEKQSSVDSLNLVQANLANFSLPS

TrEMBL top hitse value%identityAlignment
A0A2P5BGF8 Uncharacterized protein1.2e-1838.1Show/hide
Query:  MGWIYSSLNEDKLGEIIGYSSAYEIWEHLRTIYESFSTARIMALCSQLQKIRKDGLTVTQYLSQIKDIAEKFSAIGEPLSYRDHL---------------
        M WIY+SL +  +G+I+GY+SA+EIWE L  IY S S A+I  L ++LQ +RKDGLT  +Y+ + K+I    +A+GEP+S +DHL               
Subjt:  MGWIYSSLNEDKLGEIIGYSSAYEIWEHLRTIYESFSTARIMALCSQLQKIRKDGLTVTQYLSQIKDIAEKFSAIGEPLSYRDHL---------------

Query:  ----------------ALMLAYETCLEKQSSVDSLNLVQANLANFSL
                        +L+L+YE  LE Q++   L+ +QANLA+ ++
Subjt:  ----------------ALMLAYETCLEKQSSVDSLNLVQANLANFSL

A0A6J1DQX7 uncharacterized protein LOC1110223151.2e-2944Show/hide
Query:  MGWIYSSLNEDKLGEIIGYSSAYEIWEHLRTIYESFSTARIMALCSQLQKIRKDGLTVTQYLSQIKDIAEKFSAIGEPLSYRDHLA--------------
        M WIYSSL+E+K+GE++   + ++IW  L  +Y+S +TARIM L ++LQ +RKDG +V+QYL++IK+IA+KF+A+GEPLSYRDHLA              
Subjt:  MGWIYSSLNEDKLGEIIGYSSAYEIWEHLRTIYESFSTARIMALCSQLQKIRKDGLTVTQYLSQIKDIAEKFSAIGEPLSYRDHLA--------------

Query:  -----------------LMLAYETCLEKQSSVDSLNLVQANLANFSLPSSRCSLVHNNFLNLTKLPSPPLIFPSH
                         L+LAYE  L+KQ++VD LN+ QANL N SL        HN     +K P P   FP+H
Subjt:  -----------------LMLAYETCLEKQSSVDSLNLVQANLANFSLPSSRCSLVHNNFLNLTKLPSPPLIFPSH

A0A7J0DER3 Uncharacterized protein1.6e-1836.99Show/hide
Query:  MGWIYSSLNEDKLGEIIGYSSAYEIWEHLRTIYESFSTARIMALCSQLQKIRKDGLTVTQYLSQIKDIAEKFSAIGEPLSYRDHL---------------
        M WIY+S+NE  LG+I+GY+SA +IWE L  +Y + S A +  L + LQ I+KDGLT   Y+ + + +    ++IGEP++Y DHL               
Subjt:  MGWIYSSLNEDKLGEIIGYSSAYEIWEHLRTIYESFSTARIMALCSQLQKIRKDGLTVTQYLSQIKDIAEKFSAIGEPLSYRDHL---------------

Query:  ----------------ALMLAYETCLEKQSSVDSLNLVQANLANFS
                        +L+L+Y+  LE+QS+ D+L+ +QANLAN +
Subjt:  ----------------ALMLAYETCLEKQSSVDSLNLVQANLANFS

A0A7J0E8R3 Uncharacterized protein1.6e-1836.99Show/hide
Query:  MGWIYSSLNEDKLGEIIGYSSAYEIWEHLRTIYESFSTARIMALCSQLQKIRKDGLTVTQYLSQIKDIAEKFSAIGEPLSYRDHL---------------
        M WIY+S+NE  LG+I+GY+SA +IWE L  +Y + S A +  L + LQ I+KDGLT   Y+ + + +    ++IGEP++Y DHL               
Subjt:  MGWIYSSLNEDKLGEIIGYSSAYEIWEHLRTIYESFSTARIMALCSQLQKIRKDGLTVTQYLSQIKDIAEKFSAIGEPLSYRDHL---------------

Query:  ----------------ALMLAYETCLEKQSSVDSLNLVQANLANFS
                        +L+L+Y+  LE+QS+ D+L+ +QANLAN +
Subjt:  ----------------ALMLAYETCLEKQSSVDSLNLVQANLANFS

A0A7J6HRY4 Uncharacterized protein1.5e-1631.07Show/hide
Query:  MGWIYSSLNEDKLGEIIGYSSAYEIWEHLRTIYESFSTARIMALCSQLQKIRKDGLTVTQYLSQIKDIAEKFSAIGEPLSYRDHL---------------
        M W+Y+SL++  L +I+ +++A EIW  L   Y + S AR     + LQ ++KDGL  + YL ++K +    +++GEP+S ++HL               
Subjt:  MGWIYSSLNEDKLGEIIGYSSAYEIWEHLRTIYESFSTARIMALCSQLQKIRKDGLTVTQYLSQIKDIAEKFSAIGEPLSYRDHL---------------

Query:  ----------------ALMLAYETCLEKQSSVDSLNLVQANLANFSLPSSRCSLVHNNFLNLTKLPS------PPLI
                        +L+L+YETCLE+Q+   SL+ +QAN AN S P  R         +  + PS      PP+I
Subjt:  ----------------ALMLAYETCLEKQSSVDSLNLVQANLANFSLPSSRCSLVHNNFLNLTKLPS------PPLI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATGGATTTATTCTTCTCTCAATGAGGACAAGCTTGGAGAAATCATTGGTTATTCCTCAGCTTATGAGATATGGGAGCATCTTCGGACAATCTACGAATCTTTTTC
TACAGCAAGGATCATGGCTCTTTGTTCTCAACTCCAGAAAATTCGCAAGGATGGTCTTACCGTTACTCAGTATCTTTCTCAAATCAAGGATATCGCCGAAAAATTCTCTG
CTATCGGTGAGCCGTTGTCTTACCGTGATCATCTCGCCTTGATGTTGGCATATGAAACATGTCTTGAGAAACAATCTTCGGTGGATAGCTTAAATCTGGTACAAGCCAAC
TTAGCCAATTTCTCTTTACCTTCTTCTCGCTGCTCCCTCGTCCACAACAATTTCCTAAATCTAACCAAGCTCCCGTCACCCCCTCTTATTTTCCCTTCCCACCTGGTTTT
TCCTCTCCAATGCCATCAAATCCAAGCATTCTTTGTCGACCTCAGACCTTCACCTCTACCAATCCTCGTCCTCCTACTCAATCCCGTAACCGACCCCAATGCCAGAATTG
TGGCAAACTTGGGCACACTGCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGATGGATTTATTCTTCTCTCAATGAGGACAAGCTTGGAGAAATCATTGGTTATTCCTCAGCTTATGAGATATGGGAGCATCTTCGGACAATCTACGAATCTTTTTC
TACAGCAAGGATCATGGCTCTTTGTTCTCAACTCCAGAAAATTCGCAAGGATGGTCTTACCGTTACTCAGTATCTTTCTCAAATCAAGGATATCGCCGAAAAATTCTCTG
CTATCGGTGAGCCGTTGTCTTACCGTGATCATCTCGCCTTGATGTTGGCATATGAAACATGTCTTGAGAAACAATCTTCGGTGGATAGCTTAAATCTGGTACAAGCCAAC
TTAGCCAATTTCTCTTTACCTTCTTCTCGCTGCTCCCTCGTCCACAACAATTTCCTAAATCTAACCAAGCTCCCGTCACCCCCTCTTATTTTCCCTTCCCACCTGGTTTT
TCCTCTCCAATGCCATCAAATCCAAGCATTCTTTGTCGACCTCAGACCTTCACCTCTACCAATCCTCGTCCTCCTACTCAATCCCGTAACCGACCCCAATGCCAGAATTG
TGGCAAACTTGGGCACACTGCCTTAG
Protein sequenceShow/hide protein sequence
MGWIYSSLNEDKLGEIIGYSSAYEIWEHLRTIYESFSTARIMALCSQLQKIRKDGLTVTQYLSQIKDIAEKFSAIGEPLSYRDHLALMLAYETCLEKQSSVDSLNLVQAN
LANFSLPSSRCSLVHNNFLNLTKLPSPPLIFPSHLVFPLQCHQIQAFFVDLRPSPLPILVLLLNPVTDPNARIVANLGTLP