; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0008998 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008998
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H-like domain containing protein
Genome locationchr9:33739191..33741549
RNA-Seq ExpressionLag0008998
SyntenyLag0008998
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7837133.1 uncharacterized protein G2W53_005615 [Senna tora]2.1e-1733.15Show/hide
Query:  VVIFWWSGTAYRPDRGIMRTAVCGGR---PHW-GLKLNVDASVKPDTGEAGGGCVLRGAEGEIFMAACLSLQRCWSVDLAEGWAMYKGVQLARQLGFDDF
        V + W+S    R D      A+  G+   P W  +K+NVDAS     G+ G GCV+R  +G    A    +Q   S DL E +A  KG++LA+ L  D+ 
Subjt:  VVIFWWSGTAYRPDRGIMRTAVCGGR---PHW-GLKLNVDASVKPDTGEAGGGCVLRGAEGEIFMAACLSLQRCWSVDLAEGWAMYKGVQLARQLGFDDF

Query:  VVETDSLRLVKILHGDLQDVSEVGRLMEDVRMILHPWDRNKVVFSPRQGNRVAHVLASLAFSYID-RVWLEEGPSEISDAL
        ++E ++ ++V ++HG  Q++S +G +++D+R  +  + R K+ +  R  N VA  +A+ A +  + +VWL++ P  ISD L
Subjt:  VVETDSLRLVKILHGDLQDVSEVGRLMEDVRMILHPWDRNKVVFSPRQGNRVAHVLASLAFSYID-RVWLEEGPSEISDAL

KAF7845245.1 transcription factor SCREAM2-like isoform X1 [Senna tora]2.1e-1735.71Show/hide
Query:  PHW-GLKLNVDASVKPDTGEAGGGCVLRGAEGEIFMAACLSLQRCWSVDLAEGWAMYKGVQLARQLGFDDFVVETDSLRLVKILHGDLQDVSEVGRLMED
        P W  +K+NVDAS+    G+ G GCV+R  +G    A    ++   S +L E +A  +G++LA+ L  D+ ++E D+ ++  ++HG  Q++S +G L++D
Subjt:  PHW-GLKLNVDASVKPDTGEAGGGCVLRGAEGEIFMAACLSLQRCWSVDLAEGWAMYKGVQLARQLGFDDFVVETDSLRLVKILHGDLQDVSEVGRLMED

Query:  VRMILHPWDRNKVVFSPRQGNRVAHVLASLAFSY-IDRVWLEEGPSEISDALRS
        +R  +  + R KV + PR  N VA  +A+ A +    +VWLE+ P  ISD L S
Subjt:  VRMILHPWDRNKVVFSPRQGNRVAHVLASLAFSY-IDRVWLEEGPSEISDALRS

XP_022150944.1 uncharacterized protein LOC111018973 [Momordica charantia]7.8e-2040.54Show/hide
Query:  LKLNVDASVKPDTGEAGGGCVLRGAEGEIFMAACLSLQRCWSVDLAEGWAMYKGVQLARQLGFDDFVVETDSLRLVKILHGDLQDVSEVGRLMEDVRMIL
        LK+NVDA+ + ++  AG G ++R + G +++ A   L R   VD  EG+A+Y+G+ LA + GF  F +ETDSLR+  +L  D  D SEVG L   +++ L
Subjt:  LKLNVDASVKPDTGEAGGGCVLRGAEGEIFMAACLSLQRCWSVDLAEGWAMYKGVQLARQLGFDDFVVETDSLRLVKILHGDLQDVSEVGRLMEDVRMIL

Query:  HPW-DRNKVVFSPRQGNRVAHVLASLAFSYID-RVWLEEGPSEISDAL
            +R    F+ R GN  AH+LA LA +    ++W+EE P EIS  L
Subjt:  HPW-DRNKVVFSPRQGNRVAHVLASLAFSYID-RVWLEEGPSEISDAL

XP_040987788.1 uncharacterized protein LOC121235507 [Juglans microcarpa x Juglans regia]1.2e-1735.37Show/hide
Query:  LKLNVDASVKPDTGEAGGGCVLRGAEGEIFMAACLSLQRCWSVDLAEGWAMYKGVQLARQLGFDDFVVETDSLRLVKILHGDLQDVSEVGRLMEDVRMIL
        LK+N DA++K  T + G G ++R   GE++ AACL+ +  + +  AE  AM++ + L  +LG  + + E D+  ++  +    +D S  G L+E+++  L
Subjt:  LKLNVDASVKPDTGEAGGGCVLRGAEGEIFMAACLSLQRCWSVDLAEGWAMYKGVQLARQLGFDDFVVETDSLRLVKILHGDLQDVSEVGRLMEDVRMIL

Query:  HPWDRNKVVFSPRQGNRVAHVLASLA-FSYIDRVWLEEGPSEISDAL
        + + R +V F  R+GN VAH LA LA +   D  W+EE P  I+D L
Subjt:  HPWDRNKVVFSPRQGNRVAHVLASLA-FSYIDRVWLEEGPSEISDAL

XP_042964529.1 uncharacterized protein LOC122298728 [Carya illinoinensis]2.1e-1733.9Show/hide
Query:  AYRPDRGIM--RTAVCGGRPHW------GLKLNVDASVKPDTGEAGGGCVLRGAEGEIFMAACLSLQRCWSVDLAEGWAMYKGVQLARQLGFDDFVVETD
        A +  RG M  +T  C     W       +K+N DA+V+ D  + G G V+R  E E+  + C  +       + E  A+ + VQ   +LGF + V+E D
Subjt:  AYRPDRGIM--RTAVCGGRPHW------GLKLNVDASVKPDTGEAGGGCVLRGAEGEIFMAACLSLQRCWSVDLAEGWAMYKGVQLARQLGFDDFVVETD

Query:  SLRLVKILHGDLQDVSEVGRLMEDVRMILHPWDRNKVVFSPRQGNRVAHVLASLAFSY-IDRVWLEEGPSEISDALR
        +  +VK  +   +  +  G +ME+VR  L   +  K+ F  R+ N VAH+LA  AF+Y  +RVW+EEGP EI   L+
Subjt:  SLRLVKILHGDLQDVSEVGRLMEDVRMILHPWDRNKVVFSPRQGNRVAHVLASLAFSY-IDRVWLEEGPSEISDALR

TrEMBL top hitse value%identityAlignment
A0A2I4ENH2 uncharacterized protein LOC1089912157.4e-1630.97Show/hide
Query:  GRPHW------GLKLNVDASVKPDTGEAGGGCVLRGAEGEIFMAACLSLQRCWSVDLAEGWAMYKGVQLARQLGFDDFVVETDSLRLVKILHGDLQDVSE
        G+ HW        K+N D +    + + G G V+R  +GE+  A   S +   +  +AEG A+++ ++   ++G  D   + DS  L++ +  D ++ S 
Subjt:  GRPHW------GLKLNVDASVKPDTGEAGGGCVLRGAEGEIFMAACLSLQRCWSVDLAEGWAMYKGVQLARQLGFDDFVVETDSLRLVKILHGDLQDVSE

Query:  VGRLMEDVRMILHPWDRNKVVFSPRQGNRVAHVLASLAFSYIDR-VWLEEGPSEI
         G+++ED++ + H +   KVVF+ R+ N VAH LA +A  + +  VW+EE PS I
Subjt:  VGRLMEDVRMILHPWDRNKVVFSPRQGNRVAHVLASLAFSYIDR-VWLEEGPSEI

A0A2I4GJL1 uncharacterized protein LOC1090084471.9e-1631.97Show/hide
Query:  LKLNVDASVKPDTGEAGGGCVLRGAEGEIFMAACLSLQRCWSVDLAEGWAMYKGVQLARQLGFDDFVVETDSLRLVKILHGDLQDVSEVGRLMEDVRMIL
        +K N DA+   +    G G V+R  EGE+ +  C   +      LAE WA++K +++  +L     + E D+  ++  ++ D++D S +G ++ED++   
Subjt:  LKLNVDASVKPDTGEAGGGCVLRGAEGEIFMAACLSLQRCWSVDLAEGWAMYKGVQLARQLGFDDFVVETDSLRLVKILHGDLQDVSEVGRLMEDVRMIL

Query:  HPWDRNKVVFSPRQGNRVAHVLASLAFSY-IDRVWLEEGPSEISDAL
               V F PR GNRVAH+LA  A     +++W+EEGP  I +A+
Subjt:  HPWDRNKVVFSPRQGNRVAHVLASLAFSY-IDRVWLEEGPSEISDAL

A0A6J1DBJ7 uncharacterized protein LOC1110189733.8e-2040.54Show/hide
Query:  LKLNVDASVKPDTGEAGGGCVLRGAEGEIFMAACLSLQRCWSVDLAEGWAMYKGVQLARQLGFDDFVVETDSLRLVKILHGDLQDVSEVGRLMEDVRMIL
        LK+NVDA+ + ++  AG G ++R + G +++ A   L R   VD  EG+A+Y+G+ LA + GF  F +ETDSLR+  +L  D  D SEVG L   +++ L
Subjt:  LKLNVDASVKPDTGEAGGGCVLRGAEGEIFMAACLSLQRCWSVDLAEGWAMYKGVQLARQLGFDDFVVETDSLRLVKILHGDLQDVSEVGRLMEDVRMIL

Query:  HPW-DRNKVVFSPRQGNRVAHVLASLAFSYID-RVWLEEGPSEISDAL
            +R    F+ R GN  AH+LA LA +    ++W+EE P EIS  L
Subjt:  HPW-DRNKVVFSPRQGNRVAHVLASLAFSYID-RVWLEEGPSEISDAL

A0A6P9ECB2 uncharacterized protein LOC1183481592.5e-1631.97Show/hide
Query:  LKLNVDASVKPDTGEAGGGCVLRGAEGEIFMAACLSLQRCWSVDLAEGWAMYKGVQLARQLGFDDFVVETDSLRLVKILHGDLQDVSEVGRLMEDVRMIL
        +K N DA++  +    G G V+R  EGE+ ++ C   +      LAE WA++K +++  +L     + E D   ++  ++ D +D S +G ++ED++ + 
Subjt:  LKLNVDASVKPDTGEAGGGCVLRGAEGEIFMAACLSLQRCWSVDLAEGWAMYKGVQLARQLGFDDFVVETDSLRLVKILHGDLQDVSEVGRLMEDVRMIL

Query:  HPWDRNKVVFSPRQGNRVAHVLASLAFSYID-RVWLEEGPSEISDAL
               V F PR GNRVAH+LA  A    + ++W+EEGP  I +A+
Subjt:  HPWDRNKVVFSPRQGNRVAHVLASLAFSYID-RVWLEEGPSEISDAL

A0A6P9ETQ1 uncharacterized protein LOC1089834733.3e-1632.26Show/hide
Query:  GRPHW------GLKLNVDASVKPDTGEAGGGCVLRGAEGEIFMAACLSLQRCWSVDLAEGWAMYKGVQLARQLGFDDFVVETDSLRLVKILHGDLQDVSE
        G+ HW        K+N D +    + + G G V+R  +GE+  A   S +   +  +AEG A+++ ++L  ++G  D   E DS  L++ +  D ++ S 
Subjt:  GRPHW------GLKLNVDASVKPDTGEAGGGCVLRGAEGEIFMAACLSLQRCWSVDLAEGWAMYKGVQLARQLGFDDFVVETDSLRLVKILHGDLQDVSE

Query:  VGRLMEDVRMILHPWDRNKVVFSPRQGNRVAHVLASLAFSYIDR-VWLEEGPSEI
         G ++ED++ + H ++  KVVF+ R+ N VAH LA +A    +  VW+EE PS I
Subjt:  VGRLMEDVRMILHPWDRNKVVFSPRQGNRVAHVLASLAFSYIDR-VWLEEGPSEI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.3e-0929.2Show/hide
Query:  PHWGLKLNVDASVKPDTGEAGGGCVLRGAEGEIFMAACLSLQRCWSVDLAEGWAMYKGVQLARQLGFDDFVVETDSLRLVKILHGDLQDVSEVGRLMEDV
        P+  +K N DA+ + +    G G +LR   G +      +L R  +V  AE  A+   V    +  +   + E+D+  LV +L+ D      +   +ED+
Subjt:  PHWGLKLNVDASVKPDTGEAGGGCVLRGAEGEIFMAACLSLQRCWSVDLAEGWAMYKGVQLARQLGFDDFVVETDSLRLVKILHGDLQDVSEVGRLMEDV

Query:  RMILHPWDRNKVVFSPRQGNRVAHVLA--SLAFSYID
        + +LH ++  K  F+PR GN+VA  +A  S++FS  D
Subjt:  RMILHPWDRNKVVFSPRQGNRVAHVLA--SLAFSYID

AT5G38920.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein6.4e-0430.95Show/hide
Query:  LAEGWAMYKGVQLARQLGFDDFVVETDSLRLVKILHGDLQDVSEVGRLMEDVRMILHPWDRNKVVFSPRQGNRVAHVLASLAFS
        + E  AM   V    +L +   + E+DS +LV IL  D  D+  +  +++D++++L  ++  K VF  R GN VA  +A  + S
Subjt:  LAEGWAMYKGVQLARQLGFDDFVVETDSLRLVKILHGDLQDVSEVGRLMEDVRMILHPWDRNKVVFSPRQGNRVAHVLASLAFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGTTTGCCTACTAAGGAAAACCTTCTCAAGCGTGGCATCATTGTCTCTAGCCTGTGTACTTTGTGTAATGACCAGGTTCGAGGAAATTGTTGGGGCGATGAAGGA
TAATCTCCCCGGGCCGGATTTTGAGCTGGTGGTCATTTTTTGGTGGTCAGGGACTGCTTACAGGCCCGATCGAGGGATCATGCGGACCGCTGTGTGTGGAGGCCGCCCCC
ACTGGGGGCTGAAGTTGAATGTTGATGCCTCTGTCAAGCCAGATACAGGGGAAGCTGGGGGTGGTTGTGTACTGCGTGGGGCTGAGGGTGAGATCTTTATGGCGGCCTGT
CTGAGTCTACAGAGATGTTGGAGCGTGGATCTGGCTGAAGGTTGGGCTATGTATAAAGGGGTCCAGCTTGCTCGCCAGCTGGGTTTCGATGATTTCGTGGTGGAGACCGA
CTCTCTAAGATTGGTCAAAATTCTTCATGGTGATTTGCAGGATGTTTCGGAAGTAGGGCGACTGATGGAAGATGTCCGAATGATCCTCCATCCCTGGGACAGGAACAAGG
TTGTGTTTTCGCCACGCCAGGGGAATAGGGTGGCACATGTACTGGCAAGCTTGGCCTTCTCTTATATTGACCGTGTTTGGCTTGAGGAAGGGCCTAGCGAAATTTCTGAT
GCTCTAAGGTCAGGCCTGATTAGATTCCTGGGGTGGTTTTGGAGGTGGGATTTGTTGGTGATATTCTCTGGGGAAGATGGGTGGAGGGTGCTTATAAATCTGACCAAGGC
TAGTAGGGCGGCTCTAGGGAAGGCCTTACCACACACTCACGTGAGAATTTTCTTGTTAATCTTGGCTTGCTCCAGTACTGTTATCATGCAGGCTGCTTCATTTAAGGGTA
TTGTGCAGGTTGTTTTTAGGGGCTTGCAGTATCATGTGGCTTGTAGCAATGAGTTTGTTCTCGCCGTAAGGTGGTATACGAGCTCGATGGAGGAAGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGATCGTTTGCCTACTAAGGAAAACCTTCTCAAGCGTGGCATCATTGTCTCTAGCCTGTGTACTTTGTGTAATGACCAGGTTCGAGGAAATTGTTGGGGCGATGAAGGA
TAATCTCCCCGGGCCGGATTTTGAGCTGGTGGTCATTTTTTGGTGGTCAGGGACTGCTTACAGGCCCGATCGAGGGATCATGCGGACCGCTGTGTGTGGAGGCCGCCCCC
ACTGGGGGCTGAAGTTGAATGTTGATGCCTCTGTCAAGCCAGATACAGGGGAAGCTGGGGGTGGTTGTGTACTGCGTGGGGCTGAGGGTGAGATCTTTATGGCGGCCTGT
CTGAGTCTACAGAGATGTTGGAGCGTGGATCTGGCTGAAGGTTGGGCTATGTATAAAGGGGTCCAGCTTGCTCGCCAGCTGGGTTTCGATGATTTCGTGGTGGAGACCGA
CTCTCTAAGATTGGTCAAAATTCTTCATGGTGATTTGCAGGATGTTTCGGAAGTAGGGCGACTGATGGAAGATGTCCGAATGATCCTCCATCCCTGGGACAGGAACAAGG
TTGTGTTTTCGCCACGCCAGGGGAATAGGGTGGCACATGTACTGGCAAGCTTGGCCTTCTCTTATATTGACCGTGTTTGGCTTGAGGAAGGGCCTAGCGAAATTTCTGAT
GCTCTAAGGTCAGGCCTGATTAGATTCCTGGGGTGGTTTTGGAGGTGGGATTTGTTGGTGATATTCTCTGGGGAAGATGGGTGGAGGGTGCTTATAAATCTGACCAAGGC
TAGTAGGGCGGCTCTAGGGAAGGCCTTACCACACACTCACGTGAGAATTTTCTTGTTAATCTTGGCTTGCTCCAGTACTGTTATCATGCAGGCTGCTTCATTTAAGGGTA
TTGTGCAGGTTGTTTTTAGGGGCTTGCAGTATCATGTGGCTTGTAGCAATGAGTTTGTTCTCGCCGTAAGGTGGTATACGAGCTCGATGGAGGAAGATTAG
Protein sequenceShow/hide protein sequence
MIVCLLRKTFSSVASLSLACVLCVMTRFEEIVGAMKDNLPGPDFELVVIFWWSGTAYRPDRGIMRTAVCGGRPHWGLKLNVDASVKPDTGEAGGGCVLRGAEGEIFMAAC
LSLQRCWSVDLAEGWAMYKGVQLARQLGFDDFVVETDSLRLVKILHGDLQDVSEVGRLMEDVRMILHPWDRNKVVFSPRQGNRVAHVLASLAFSYIDRVWLEEGPSEISD
ALRSGLIRFLGWFWRWDLLVIFSGEDGWRVLINLTKASRAALGKALPHTHVRIFLLILACSSTVIMQAASFKGIVQVVFRGLQYHVACSNEFVLAVRWYTSSMEED