; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0009003 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0009003
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSWIM-type domain-containing protein
Genome locationchr9:33788775..33789617
RNA-Seq ExpressionLag0009003
SyntenyLag0009003
Gene Ontology termsNA
InterPro domainsIPR004332 - Transposase, MuDR, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7138490.1 hypothetical protein RHSIM_Rhsim07G0255600 [Rhododendron simsii]1.1e-3334.84Show/hide
Query:  LALVNANTSIDVFVEHVVHE-DVNMRDVYYEEAGVEHENENDEISNKEDSV--KDISFSGSEEDLNDDLEHRIVDDFEEED--------REGNNGEEEGD
        +A+V  +  I+++VEH++ E D N   + +         E  EI   E+ V  +++  +   ++   DL++ + DD + +D        +E  N E++  
Subjt:  LALVNANTSIDVFVEHVVHE-DVNMRDVYYEEAGVEHENENDEISNKEDSV--KDISFSGSEEDLNDDLEHRIVDDFEEED--------REGNNGEEEGD

Query:  QCNNESDGEHDLDSMGELFDSNV-----ENNSRFPSFKNTVLPSEIRFEVGMLFSSLDEFKIVVFEYAINGGWSIRFEKSDKTRVRARCLKTCSWVAYVT
        + N   D + ++D+     D        E   RF +FK       +RF  GMLFSSL +FK  + EYA++GG+ I+F+K+D++RVRA C   C++    +
Subjt:  QCNNESDGEHDLDSMGELFDSNV-----ENNSRFPSFKNTVLPSEIRFEVGMLFSSLDEFKIVVFEYAINGGWSIRFEKSDKTRVRARCLKTCSWVAYVT

Query:  KIKDESTFQMRTLVDKHTCSQSFDNLRATSNWLAGKLLNRVKEQPNIKLTTIQEKIQRKFVVKVSKSKAYWAKRKAIEMVEGNHAKQ
        K+  + TFQ++T   +H C++++ N+R +S +LAGKL+ +VK+QPN++L+ IQEK+  KFVV++S+SKAY AKR+A+++VEG+H +Q
Subjt:  KIKDESTFQMRTLVDKHTCSQSFDNLRATSNWLAGKLLNRVKEQPNIKLTTIQEKIQRKFVVKVSKSKAYWAKRKAIEMVEGNHAKQ

KAF7153765.1 hypothetical protein RHSIM_Rhsim01G0020300 [Rhododendron simsii]4.6e-2936.6Show/hide
Query:  MDIAALALVNANTSIDVFVEHVVHEDVNMRD----------VYYEEAGVEHENEND-------EISNKEDSVKDISFSGSEEDLNDDLEHRIVD----DF
        MD+A+ A    N  I+V+VEH + E + ++D          +   E  V  E +ND        IS+ +DSV D++    ++DL   +   ++D    ++
Subjt:  MDIAALALVNANTSIDVFVEHVVHEDVNMRD----------VYYEEAGVEHENEND-------EISNKEDSVKDISFSGSEEDLNDDLEHRIVD----DF

Query:  EEEDREG-------NNGEEEGDQCNNESDGEHDLDSMGELFDSNVENNSRFPSFKNTVLPSEIRFEVGMLFSSLDEFKIVVFEYAINGGWSIRFEKSDKT
         E  R G         G E+      E++GE             V  ++ +   K       I+FE GM+F+SL +FK  V EYAI GG+ I+F K+DK 
Subjt:  EEEDREG-------NNGEEEGDQCNNESDGEHDLDSMGELFDSNVENNSRFPSFKNTVLPSEIRFEVGMLFSSLDEFKIVVFEYAINGGWSIRFEKSDKT

Query:  RVRARCLK--TCSWVAYVTKIKDESTFQMRTLVDKHTCSQSFDNLRATSNWLAGKLLNRVKEQPNIKLTTIQEKIQRKFVVKVSKSKAYWAKRKAIEMVE
        RVRA C K   C +   V+K+  + TFQ++T V +H C++S+ N+R  S +L+ KL+N+VK+QPNIKL+ IQE++Q+K+VV +S+SKAY AKR+A++ VE
Subjt:  RVRARCLK--TCSWVAYVTKIKDESTFQMRTLVDKHTCSQSFDNLRATSNWLAGKLLNRVKEQPNIKLTTIQEKIQRKFVVKVSKSKAYWAKRKAIEMVE

Query:  GNHAKQ
        G+HA+Q
Subjt:  GNHAKQ

KAG5541483.1 hypothetical protein RHGRI_021341 [Rhododendron griersonianum]1.4e-3337.42Show/hide
Query:  MDIAALALVNANTSIDVFVEHVVHEDVNMRD----------VYYEEAGVEHENEND-------EISNKEDSVKDISFSGSEED--LNDDLEHRIVD---D
        MD+A+ A    N  I+V+VEH + E + ++D          +   E  V  E +ND        IS+ +DSV D+     E+D   +DDL  R  D   D
Subjt:  MDIAALALVNANTSIDVFVEHVVHEDVNMRD----------VYYEEAGVEHENEND-------EISNKEDSVKDISFSGSEED--LNDDLEHRIVD---D

Query:  FEEEDRE---------GNNGEEEGDQCNNES------DGEHDLDSMGELFDSNVENNSRFP---SFKNTVLPSEIRFEVGMLFSSLDEFKIVVFEYAING
         E ED +         G++ E+E  Q  +E       + E  L  +G     N     R P    ++       I+F+ GM+F+SL +FK  V EYA+ G
Subjt:  FEEEDRE---------GNNGEEEGDQCNNES------DGEHDLDSMGELFDSNVENNSRFP---SFKNTVLPSEIRFEVGMLFSSLDEFKIVVFEYAING

Query:  GWSIRFEKSDKTRVRARCLK--TCSWVAYVTKIKDESTFQMRTLVDKHTCSQSFDNLRATSNWLAGKLLNRVKEQPNIKLTTIQEKIQRKFVVKVSKSKA
        G+ I+F K+DK RVRA C K   C +   V+K+  + TFQ++T V +H C++S+ N+R  S +L+ KL+N+VK+QPNIKL+ IQE++Q+K+VV +S+SKA
Subjt:  GWSIRFEKSDKTRVRARCLK--TCSWVAYVTKIKDESTFQMRTLVDKHTCSQSFDNLRATSNWLAGKLLNRVKEQPNIKLTTIQEKIQRKFVVKVSKSKA

Query:  YWAKRKAIEMVEGNHAKQ
        Y AKR+A++ VEG+HA+Q
Subjt:  YWAKRKAIEMVEGNHAKQ

XP_022153708.1 uncharacterized protein LOC111021158 [Momordica charantia]1.0e-3943.37Show/hide
Query:  EAGVEHENENDEI--SNKEDSVKDISFSGSEEDLNDDLEHRIVDDFEEEDREGNNGEEEGDQCNNE-SDGEHDLD-----SMGELFDSNVENNSRFPSFK
        E  VEHE E++ I   N  D++  IS   SE + +DDL   I  D + E       E  G   N E +DG  D+D     S+ +  DS V+   ++P ++
Subjt:  EAGVEHENENDEI--SNKEDSVKDISFSGSEEDLNDDLEHRIVDDFEEEDREGNNGEEEGDQCNNE-SDGEHDLD-----SMGELFDSNVENNSRFPSFK

Query:  NTVLPSEIRFEVGMLFSSLDEFKIVVFEYAINGGWSIRFEKSDKTRVRARCLKTCSWVAYVTKIKDESTFQMRTLVDKHTCSQSFDNLRATSNWLAGKLL
         T    +  FE+GM F+SL EFK VV +YA+ GGW IRF K+DKTRVRA+C+  C W+AYV K++ E T+Q++T V +H+CS+SF N   TS WL  +++
Subjt:  NTVLPSEIRFEVGMLFSSLDEFKIVVFEYAINGGWSIRFEKSDKTRVRARCLKTCSWVAYVTKIKDESTFQMRTLVDKHTCSQSFDNLRATSNWLAGKLL

Query:  NRVKEQPNIKLTTIQEKIQRKFVVKVSKSKAYWAKRKAIEMVEGNHAKQ
        N VKEQP+I+L  IQEK+QRK++ +++K KA+ AK+ A+++V G+H +Q
Subjt:  NRVKEQPNIKLTTIQEKIQRKFVVKVSKSKAYWAKRKAIEMVEGNHAKQ

XP_023896782.1 uncharacterized protein LOC112008678 [Quercus suber]3.4e-3242.5Show/hide
Query:  DDFEEEDREGNNGEEEGDQCNNESDGEHDLDSMGELFDSNVENNSRFPSFKNTVLPSEIRFEVGMLFSSLDEFKIVVFEYAINGGWSIRFEKSDKTRVRA
        D   EE          GD+  ++SD E D D+     D NV N  +FP FK    P  +RFE  MLF S  +FK  + EYA+NGGW ++F K+DK RVRA
Subjt:  DDFEEEDREGNNGEEEGDQCNNESDGEHDLDSMGELFDSNVENNSRFPSFKNTVLPSEIRFEVGMLFSSLDEFKIVVFEYAINGGWSIRFEKSDKTRVRA

Query:  RCLKTCSWVAYVTKIKDESTFQMRTLVDKHTCSQSFDNLRATSNWLAGKLLNRVKEQPNIKLTTIQEKIQRKFVVKVSKSKAYWAKRKAIEMVEGNHAKQ
        +C   C + AY+ K+  E ++Q++TL  +HTC++S+ N R T+ +LA KL+ +V+ QPNIKL  IQE +  K+VV ++  KA  A+ KA E V+G++ +Q
Subjt:  RCLKTCSWVAYVTKIKDESTFQMRTLVDKHTCSQSFDNLRATSNWLAGKLLNRVKEQPNIKLTTIQEKIQRKFVVKVSKSKAYWAKRKAIEMVEGNHAKQ

TrEMBL top hitse value%identityAlignment
A0A2N9G7H5 Uncharacterized protein3.8e-3738.81Show/hide
Query:  LVNANTSIDVFVEHVVHEDVNMRDVYYEEAGVEHENE-NDEISNKEDSVKDISFSGSEEDLNDDLEHRIVDDFEEE--DREGNNGEE-----------EG
        LV     IDVFVEH+V E V   D+  E+   ++  + +D+    ED V D+     +ED +DDL  R  D  ++E  D+  NN +            E 
Subjt:  LVNANTSIDVFVEHVVHEDVNMRDVYYEEAGVEHENE-NDEISNKEDSVKDISFSGSEEDLNDDLEHRIVDDFEEE--DREGNNGEE-----------EG

Query:  DQCNNESDGEHDLDSMGELFDSNVENNSR---FPSFKNTVLPSEIRFEVGMLFSSLDEFKIVVFEYAINGGWSIRFEKSDKTRVRARCLKTCSWVAYVTK
        D+   + D   D++S   ++       SR   FP F+      +I FE GMLF+S  ++K  + +YA+ GGW I+F K+DK RVRA C + C +VAY+ K
Subjt:  DQCNNESDGEHDLDSMGELFDSNVENNSR---FPSFKNTVLPSEIRFEVGMLFSSLDEFKIVVFEYAINGGWSIRFEKSDKTRVRARCLKTCSWVAYVTK

Query:  IKDESTFQMRTLVDKHTCSQSFDNLRATSNWLAGKLLNRVKEQPNIKLTTIQEKIQRKFVVKVSKSKAYWAKRKAIEMVEGNHAKQ
        +  E TFQ++TL  KH+C++ + N R T+ +LA KL+ RVK+QP+IKL +IQ+K+ +K+V  +S+SKAY AK KA++++EG+H +Q
Subjt:  IKDESTFQMRTLVDKHTCSQSFDNLRATSNWLAGKLLNRVKEQPNIKLTTIQEKIQRKFVVKVSKSKAYWAKRKAIEMVEGNHAKQ

A0A2N9GPL9 Uncharacterized protein2.6e-3839.38Show/hide
Query:  LVNANTSIDVFVEHVVHEDVNMRDVYYEEAGVEHENE-NDEISNKEDSVKDISFSGSEEDLNDDLEHRIVDDFEEE--DREGNN----------------
        LV     IDVFVEH+V E V   D+  E+   ++  + +D+    ED V D+     +ED +DDL  R  D  ++E  D+  NN                
Subjt:  LVNANTSIDVFVEHVVHEDVNMRDVYYEEAGVEHENE-NDEISNKEDSVKDISFSGSEEDLNDDLEHRIVDDFEEE--DREGNN----------------

Query:  -GEEEGDQCNNESDGEHDLDSMGELFDSNVENNSR---FPSFKNTVLPSEIRFEVGMLFSSLDEFKIVVFEYAINGGWSIRFEKSDKTRVRARCLKTCSW
          E E D  N E D   D++S   ++       SR   FP F+      +IRFE G+LF+S  +FK  + +YA+ GGW I+F K+DK RVRA C + C +
Subjt:  -GEEEGDQCNNESDGEHDLDSMGELFDSNVENNSR---FPSFKNTVLPSEIRFEVGMLFSSLDEFKIVVFEYAINGGWSIRFEKSDKTRVRARCLKTCSW

Query:  VAYVTKIKDESTFQMRTLVDKHTCSQSFDNLRATSNWLAGKLLNRVKEQPNIKLTTIQEKIQRKFVVKVSKSKAYWAKRKAIEMVEGNHAKQ
        VAY+ K+  E TFQ++TL  KH+C++ + N R T+ +LA KL+ RVK+QP+IKL +IQ+K+ +K+V  +S+SKAY AK KA++++EG+H +Q
Subjt:  VAYVTKIKDESTFQMRTLVDKHTCSQSFDNLRATSNWLAGKLLNRVKEQPNIKLTTIQEKIQRKFVVKVSKSKAYWAKRKAIEMVEGNHAKQ

A0A2N9HKG1 SWIM-type domain-containing protein2.6e-4140.73Show/hide
Query:  LVNANTSIDVFVEHVVHEDVNMRDVYYEEAGVEHE-NENDEISNKEDSVKDISFSGSEEDLNDDLEHRIVDDFEEE--DREGNNGEEEGDQCNNESDGEH
        LV     I+VFVEH+V E +   D+  E+   ++  N +D+   +ED V D+     ++D +DDL  R  D  ++E  D+  NN + +    +N+ +   
Subjt:  LVNANTSIDVFVEHVVHEDVNMRDVYYEEAGVEHE-NENDEISNKEDSVKDISFSGSEEDLNDDLEHRIVDDFEEE--DREGNNGEEEGDQCNNESDGEH

Query:  DLDSMGELFDSNVENNSR---FPSFKNTVLPSEIRFEVGMLFSSLDEFKIVVFEYAINGGWSIRFEKSDKTRVRARCLKTCSWVAYVTKIKDESTFQMRT
        D++S   ++       SR   FP F+      +IRFE+GMLF+S  +FK  + EYA+ GGW IRF K+DK RVRA C + C +VAY+ K+  E TFQ++T
Subjt:  DLDSMGELFDSNVENNSR---FPSFKNTVLPSEIRFEVGMLFSSLDEFKIVVFEYAINGGWSIRFEKSDKTRVRARCLKTCSWVAYVTKIKDESTFQMRT

Query:  LVDKHTCSQSFDNLRATSNWLAGKLLNRVKEQPNIKLTTIQEKIQRKFVVKVSKSKAYWAKRKAIEMVEGNHAKQ
        L  +H+CS+ F N R T+ +LA KL+ RVK+QP+IKL +IQ+K+ +K+V  +S+SKAY AK KA++++EG+H +Q
Subjt:  LVDKHTCSQSFDNLRATSNWLAGKLLNRVKEQPNIKLTTIQEKIQRKFVVKVSKSKAYWAKRKAIEMVEGNHAKQ

A0A2N9HUS0 Uncharacterized protein8.5e-3738.64Show/hide
Query:  DIAALALVNA---NTSIDVFVEHVV--------HEDVNM-----RDVYYEEAGVEHENENDEISNKEDSVKDISFSGSEEDLNDD-----LEHRIV----
        D  A+A+V+A   +  I++FVEH V        H  +        DV+++    E  NE +E+ +       + FS SEE  +DD        R V    
Subjt:  DIAALALVNA---NTSIDVFVEHVV--------HEDVNM-----RDVYYEEAGVEHENENDEISNKEDSVKDISFSGSEEDLNDD-----LEHRIV----

Query:  --------DDFEEEDREGNNGEEEGDQCNNESDGEHDLDSMGELFDSNVENNSRFPSFKNTVLPSEIRFEVGMLFSSLDEFKIVVFEYAINGGWSIRFEK
                +D  +    G  G E+       SD +    S   L   + +   ++P +K       I+FE+GM F+SL EFK  V +YA++GG  IRFEK
Subjt:  --------DDFEEEDREGNNGEEEGDQCNNESDGEHDLDSMGELFDSNVENNSRFPSFKNTVLPSEIRFEVGMLFSSLDEFKIVVFEYAINGGWSIRFEK

Query:  SDKTRVRARCLKTCSWVAYVTKIKDESTFQMRTLVDKHTCSQSFDNLRATSNWLAGKLLNRVKEQPNIKLTTIQEKIQRKFVVKVSKSKAYWAKRKAIEM
        +DK RVRA C K C WVAY  K+  E T Q+RT V++HTCS+S+ N RATS WL  KL NR+ EQP++  +TIQEK+ +KFVV +S+SKAY AK+ A+E 
Subjt:  SDKTRVRARCLKTCSWVAYVTKIKDESTFQMRTLVDKHTCSQSFDNLRATSNWLAGKLLNRVKEQPNIKLTTIQEKIQRKFVVKVSKSKAYWAKRKAIEM

Query:  VEGNHAKQ
        +EG+H +Q
Subjt:  VEGNHAKQ

A0A6J1DI69 uncharacterized protein LOC1110211584.8e-4043.37Show/hide
Query:  EAGVEHENENDEI--SNKEDSVKDISFSGSEEDLNDDLEHRIVDDFEEEDREGNNGEEEGDQCNNE-SDGEHDLD-----SMGELFDSNVENNSRFPSFK
        E  VEHE E++ I   N  D++  IS   SE + +DDL   I  D + E       E  G   N E +DG  D+D     S+ +  DS V+   ++P ++
Subjt:  EAGVEHENENDEI--SNKEDSVKDISFSGSEEDLNDDLEHRIVDDFEEEDREGNNGEEEGDQCNNE-SDGEHDLD-----SMGELFDSNVENNSRFPSFK

Query:  NTVLPSEIRFEVGMLFSSLDEFKIVVFEYAINGGWSIRFEKSDKTRVRARCLKTCSWVAYVTKIKDESTFQMRTLVDKHTCSQSFDNLRATSNWLAGKLL
         T    +  FE+GM F+SL EFK VV +YA+ GGW IRF K+DKTRVRA+C+  C W+AYV K++ E T+Q++T V +H+CS+SF N   TS WL  +++
Subjt:  NTVLPSEIRFEVGMLFSSLDEFKIVVFEYAINGGWSIRFEKSDKTRVRARCLKTCSWVAYVTKIKDESTFQMRTLVDKHTCSQSFDNLRATSNWLAGKLL

Query:  NRVKEQPNIKLTTIQEKIQRKFVVKVSKSKAYWAKRKAIEMVEGNHAKQ
        N VKEQP+I+L  IQEK+QRK++ +++K KA+ AK+ A+++V G+H +Q
Subjt:  NRVKEQPNIKLTTIQEKIQRKFVVKVSKSKAYWAKRKAIEMVEGNHAKQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATAGCCGCCTTAGCTTTAGTAAATGCAAATACATCCATTGATGTATTTGTTGAGCATGTAGTGCATGAAGATGTAAACATGAGAGATGTCTATTATGAAGAAGC
AGGAGTGGAGCATGAAAATGAAAATGACGAAATATCTAATAAAGAAGATAGCGTAAAAGATATATCATTTTCTGGTAGTGAGGAGGATTTAAATGATGATCTAGAACATA
GGATAGTCGATGATTTTGAAGAGGAAGATAGGGAAGGAAATAATGGTGAAGAAGAAGGTGATCAATGTAATAATGAGTCTGATGGTGAGCATGATTTAGATTCAATGGGA
GAACTTTTTGATTCCAATGTGGAGAACAACTCTAGATTTCCATCATTTAAAAACACGGTGCTCCCTTCAGAAATTCGGTTTGAGGTAGGCATGTTGTTTAGTTCTTTGGA
TGAGTTTAAGATTGTTGTTTTTGAATATGCTATAAATGGAGGATGGTCAATTCGTTTTGAGAAGTCTGATAAGACAAGAGTTCGAGCTAGATGCTTAAAAACATGTTCGT
GGGTTGCTTATGTGACAAAAATAAAAGATGAGTCAACCTTTCAAATGAGGACCCTTGTTGATAAACACACTTGTAGTCAATCATTCGACAATCTTCGAGCAACTTCAAAT
TGGTTGGCTGGAAAACTATTGAATAGAGTTAAAGAGCAACCAAATATTAAATTGACTACAATTCAGGAGAAGATCCAACGGAAATTTGTTGTCAAAGTCTCCAAGAGCAA
GGCATATTGGGCTAAGAGAAAAGCAATTGAGATGGTAGAAGGGAACCATGCAAAGCAGAATTTATTGCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATATAGCCGCCTTAGCTTTAGTAAATGCAAATACATCCATTGATGTATTTGTTGAGCATGTAGTGCATGAAGATGTAAACATGAGAGATGTCTATTATGAAGAAGC
AGGAGTGGAGCATGAAAATGAAAATGACGAAATATCTAATAAAGAAGATAGCGTAAAAGATATATCATTTTCTGGTAGTGAGGAGGATTTAAATGATGATCTAGAACATA
GGATAGTCGATGATTTTGAAGAGGAAGATAGGGAAGGAAATAATGGTGAAGAAGAAGGTGATCAATGTAATAATGAGTCTGATGGTGAGCATGATTTAGATTCAATGGGA
GAACTTTTTGATTCCAATGTGGAGAACAACTCTAGATTTCCATCATTTAAAAACACGGTGCTCCCTTCAGAAATTCGGTTTGAGGTAGGCATGTTGTTTAGTTCTTTGGA
TGAGTTTAAGATTGTTGTTTTTGAATATGCTATAAATGGAGGATGGTCAATTCGTTTTGAGAAGTCTGATAAGACAAGAGTTCGAGCTAGATGCTTAAAAACATGTTCGT
GGGTTGCTTATGTGACAAAAATAAAAGATGAGTCAACCTTTCAAATGAGGACCCTTGTTGATAAACACACTTGTAGTCAATCATTCGACAATCTTCGAGCAACTTCAAAT
TGGTTGGCTGGAAAACTATTGAATAGAGTTAAAGAGCAACCAAATATTAAATTGACTACAATTCAGGAGAAGATCCAACGGAAATTTGTTGTCAAAGTCTCCAAGAGCAA
GGCATATTGGGCTAAGAGAAAAGCAATTGAGATGGTAGAAGGGAACCATGCAAAGCAGAATTTATTGCAATGA
Protein sequenceShow/hide protein sequence
MDIAALALVNANTSIDVFVEHVVHEDVNMRDVYYEEAGVEHENENDEISNKEDSVKDISFSGSEEDLNDDLEHRIVDDFEEEDREGNNGEEEGDQCNNESDGEHDLDSMG
ELFDSNVENNSRFPSFKNTVLPSEIRFEVGMLFSSLDEFKIVVFEYAINGGWSIRFEKSDKTRVRARCLKTCSWVAYVTKIKDESTFQMRTLVDKHTCSQSFDNLRATSN
WLAGKLLNRVKEQPNIKLTTIQEKIQRKFVVKVSKSKAYWAKRKAIEMVEGNHAKQNLLQ