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Lag0009029 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0009029
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr9:34294321..34300520
RNA-Seq ExpressionLag0009029
SyntenyLag0009029
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_012857002.1 PREDICTED: uncharacterized protein LOC105976270 [Erythranthe guttata]5.6e-0952.31Show/hide
Query:  RLHNHNDSTWVIGGDFNEILWDNEKIGGTIHDHRLIHNIRKALDDCNLLDLDFSRGIFTWCNRRD
        +L NH +  WV+GGD+NEIL +NEK GG       I   R+ALDDC L DL+F    FTW N RD
Subjt:  RLHNHNDSTWVIGGDFNEILWDNEKIGGTIHDHRLIHNIRKALDDCNLLDLDFSRGIFTWCNRRD

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]7.4e-0939.81Show/hide
Query:  TRPDLNRFGSGRFVRTTGSD-------------RLHNHNDSTWVIGGDFNEILWDNEKIGGTIHDHRLIHNIRKALDDCNLLDLDFSRGIFTWCNRRDLG
        TR DL+   SGRF    G               R+ N + S W+IGGD N ILW+ E    + +D   I   R  +D C+L D+ F  GIFTWCN R  G
Subjt:  TRPDLNRFGSGRFVRTTGSD-------------RLHNHNDSTWVIGGDFNEILWDNEKIGGTIHDHRLIHNIRKALDDCNLLDLDFSRGIFTWCNRRDLG

Query:  DQV
        DQ+
Subjt:  DQV

XP_030478213.1 uncharacterized protein LOC115695276 [Cannabis sativa]7.4e-0958.18Show/hide
Query:  WVIGGDFNEILWDNEKIGGTIHDHRLIHNIRKALDDCNLLDLDFSRGIFTWCNRR
        W+IGGDFNEIL   EK GG      LI+N RKALDDC L +++F   +FTWCN R
Subjt:  WVIGGDFNEILWDNEKIGGTIHDHRLIHNIRKALDDCNLLDLDFSRGIFTWCNRR

XP_042939418.1 uncharacterized protein LOC122274450 [Carya illinoinensis]9.6e-0952.54Show/hide
Query:  DSTWVIGGDFNEILWDNEKIGGTIHDHRLIHNIRKALDDCNLLDLDFSRGIFTWCNRRD
        D  W++ GDFNE+L  NEK+GG     R I   R  LDDC LLDL +    FTWCNRR+
Subjt:  DSTWVIGGDFNEILWDNEKIGGTIHDHRLIHNIRKALDDCNLLDLDFSRGIFTWCNRRD

XP_042973089.1 uncharacterized protein LOC122304890 [Carya illinoinensis]2.8e-0850.88Show/hide
Query:  NDSTWVIGGDFNEILWDNEKIGGTIHDHRLIHNIRKALDDCNLLDLDFSRGIFTWCN
        ND  W +GGDFNEILW NEK+GG       I+  R+AL+DC L+D+ +    FTW N
Subjt:  NDSTWVIGGDFNEILWDNEKIGGTIHDHRLIHNIRKALDDCNLLDLDFSRGIFTWCN

TrEMBL top hitse value%identityAlignment
A0A1R3JW24 Reverse transcriptase2.3e-0844.05Show/hide
Query:  FGSGRFVRTTGSDRLHNHNDSTWVIGGDFNEILWDNEKIGGTIHDHRLIHNIRKALDDCNLLDLDFSRGIFTWCNRRDLGDQVK
        FG G   R+ G  +L  H + TW   GDFNEILW  EK GG +   R + + R AL DC L D+ F   IFTW      G  VK
Subjt:  FGSGRFVRTTGSDRLHNHNDSTWVIGGDFNEILWDNEKIGGTIHDHRLIHNIRKALDDCNLLDLDFSRGIFTWCNRRDLGDQVK

A0A5B7BGF4 Endo/exonuclease/phosphatase domain-containing protein3.9e-0850Show/hide
Query:  LHNHNDSTWVIGGDFNEILWDNEKIGGTIHDHRLIHNIRKALDDCNLLDLDFSRGIFTWCNRRD
        L    D  W+  GDFNEIL D+EK+G    D   + + RK LDDC   DL F    FTWCNRRD
Subjt:  LHNHNDSTWVIGGDFNEILWDNEKIGGTIHDHRLIHNIRKALDDCNLLDLDFSRGIFTWCNRRD

A0A6J1DX30 uncharacterized protein LOC1110248743.6e-0939.81Show/hide
Query:  TRPDLNRFGSGRFVRTTGSD-------------RLHNHNDSTWVIGGDFNEILWDNEKIGGTIHDHRLIHNIRKALDDCNLLDLDFSRGIFTWCNRRDLG
        TR DL+   SGRF    G               R+ N + S W+IGGD N ILW+ E    + +D   I   R  +D C+L D+ F  GIFTWCN R  G
Subjt:  TRPDLNRFGSGRFVRTTGSD-------------RLHNHNDSTWVIGGDFNEILWDNEKIGGTIHDHRLIHNIRKALDDCNLLDLDFSRGIFTWCNRRDLG

Query:  DQV
        DQ+
Subjt:  DQV

A0A803PHH5 Uncharacterized protein7.9e-0956.36Show/hide
Query:  WVIGGDFNEILWDNEKIGGTIHDHRLIHNIRKALDDCNLLDLDFSRGIFTWCNRR
        W+IGGDFNEIL   EK GG      L++N RKALDDC L +++F   +FTWCN R
Subjt:  WVIGGDFNEILWDNEKIGGTIHDHRLIHNIRKALDDCNLLDLDFSRGIFTWCNRR

A0A803Q852 Uncharacterized protein3.6e-0958.18Show/hide
Query:  WVIGGDFNEILWDNEKIGGTIHDHRLIHNIRKALDDCNLLDLDFSRGIFTWCNRR
        W+IGGDFNEIL   EK GG      LI+N RKALDDC L +++F   +FTWCN R
Subjt:  WVIGGDFNEILWDNEKIGGTIHDHRLIHNIRKALDDCNLLDLDFSRGIFTWCNRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTGGAGAATTCGAGACCACCGTTGGAGAAAAGGGAGAAAATCATTGAAGACGGTCTTCAACAATCTGAAAAGACTAAATGGTACGGGAAAACGCGAGGAAAACG
GTCCTTTTGCCAAAGTCGAGGGGTTTCAGAGTTGCCTCGTCGAAGTCGCCGCCGCCTCGTCTCGTGGGTTTTCGCCAAAGTCGCCGCCGCCTTGAAGCTTTGTAAGTCGT
TGCTTCGTCGCCGCCTCGTCGTATCGTGGGTTTTCGCCAAAATCGCCGCCGCCTTGAAGCTCGGTAAGTCGCCGCCGCAAAAAGAAGAAGAAAGAAGAAGAAGAAAAAAA
GAAACCACAGCCACCGCAACCGTCTTCTTCTTTGCCGTCTTCGTCTTCTTCCAAGCTCGTGCTACAAACTTTCCTATTTATAACTTCACCACCGCAACCGTCTTCTTTGC
CGTTCACTTTTCGTCTTCTAGAGCCTCATCCGCAGAAAGAAGAAGAAAAGAAACCGACCCGACCCGACCCGACCTGAATCGGTTCGGATCGGGTCGGTTTGTCCGTACAA
CCGGGTCGGATCGATTACATAATCACAATGATTCAACATGGGTTATTGGAGGTGATTTTAATGAGATACTATGGGATAATGAGAAAATTGGAGGCACTATTCATGATCAT
CGACTAATTCATAATATTCGGAAAGCTTTGGATGATTGCAACCTTTTGGATTTGGATTTTTCTAGAGGCATATTTACCTGGTGCAATAGACGTGATTTGGGAGATCAAGT
GAAAACTTTACATTCGGCTAAGTCCGATCATAGACTGATTGAGTTATATCTGGATGGGACAAACCAATTAAGATTCAGCTTCTCAGAACTTTTCGACATAATGCATGGAG
AAACCGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTTGGAGAATTCGAGACCACCGTTGGAGAAAAGGGAGAAAATCATTGAAGACGGTCTTCAACAATCTGAAAAGACTAAATGGTACGGGAAAACGCGAGGAAAACG
GTCCTTTTGCCAAAGTCGAGGGGTTTCAGAGTTGCCTCGTCGAAGTCGCCGCCGCCTCGTCTCGTGGGTTTTCGCCAAAGTCGCCGCCGCCTTGAAGCTTTGTAAGTCGT
TGCTTCGTCGCCGCCTCGTCGTATCGTGGGTTTTCGCCAAAATCGCCGCCGCCTTGAAGCTCGGTAAGTCGCCGCCGCAAAAAGAAGAAGAAAGAAGAAGAAGAAAAAAA
GAAACCACAGCCACCGCAACCGTCTTCTTCTTTGCCGTCTTCGTCTTCTTCCAAGCTCGTGCTACAAACTTTCCTATTTATAACTTCACCACCGCAACCGTCTTCTTTGC
CGTTCACTTTTCGTCTTCTAGAGCCTCATCCGCAGAAAGAAGAAGAAAAGAAACCGACCCGACCCGACCCGACCTGAATCGGTTCGGATCGGGTCGGTTTGTCCGTACAA
CCGGGTCGGATCGATTACATAATCACAATGATTCAACATGGGTTATTGGAGGTGATTTTAATGAGATACTATGGGATAATGAGAAAATTGGAGGCACTATTCATGATCAT
CGACTAATTCATAATATTCGGAAAGCTTTGGATGATTGCAACCTTTTGGATTTGGATTTTTCTAGAGGCATATTTACCTGGTGCAATAGACGTGATTTGGGAGATCAAGT
GAAAACTTTACATTCGGCTAAGTCCGATCATAGACTGATTGAGTTATATCTGGATGGGACAAACCAATTAAGATTCAGCTTCTCAGAACTTTTCGACATAATGCATGGAG
AAACCGAGTAA
Protein sequenceShow/hide protein sequence
MFLENSRPPLEKREKIIEDGLQQSEKTKWYGKTRGKRSFCQSRGVSELPRRSRRRLVSWVFAKVAAALKLCKSLLRRRLVVSWVFAKIAAALKLGKSPPQKEEERRRRKK
ETTATATVFFFAVFVFFQARATNFPIYNFTTATVFFAVHFSSSRASSAERRRKETDPTRPDLNRFGSGRFVRTTGSDRLHNHNDSTWVIGGDFNEILWDNEKIGGTIHDH
RLIHNIRKALDDCNLLDLDFSRGIFTWCNRRDLGDQVKTLHSAKSDHRLIELYLDGTNQLRFSFSELFDIMHGETE