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Lag0009041 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0009041
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr9:34465388..34466080
RNA-Seq ExpressionLag0009041
SyntenyLag0009041
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022131661.1 uncharacterized protein LOC111004786 [Momordica charantia]3.4e-1136.28Show/hide
Query:  SFIDRWLKIEACSSQKDISLVAITCWSIWSDRNKVTHGESIPPVQARRKWIKEHLDSFLKAISHDQPKISRGRRNNPSPEGARWIPPPDDVWKLNTDVAC
        SF+D WL +    + +   L A T W+IW DRN   HG S+     R  WI  +  ++ +A   +  +IS  + + P P   RW+PP D   K+N+D AC
Subjt:  SFIDRWLKIEACSSQKDISLVAITCWSIWSDRNKVTHGESIPPVQARRKWIKEHLDSFLKAISHDQPKISRGRRNNPSPEGARWIPPPDDVWKLNTDVAC

Query:  PSSSPESGLGISI
         S+S  +GLG+ I
Subjt:  PSSSPESGLGISI

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]2.6e-1133.58Show/hide
Query:  PITVFLEEDFHGSFIDRWLKIEACSSQKDISLVAITCWSIWSDRNKVTHGESIPPVQARRKWIKEHLDSFLKA-ISHDQPKISRGRRNNPSPEGARWIPP
        P    L  + + SF++ W  +      KD++L AIT W IW+DRN + HG+ + PV+ + +W+   LDS  +A +S+  P+     ++N  P    W P 
Subjt:  PITVFLEEDFHGSFIDRWLKIEACSSQKDISLVAITCWSIWSDRNKVTHGESIPPVQARRKWIKEHLDSFLKA-ISHDQPKISRGRRNNPSPEGARWIPP

Query:  PDDVWKLNTDVACPSSSPESGLGISIPNWLCNLV
             KLNTD AC  +S  +  G  I +  C+LV
Subjt:  PDDVWKLNTDVACPSSSPESGLGISIPNWLCNLV

XP_030936557.1 uncharacterized protein LOC115961775 [Quercus lobata]6.7e-0731.09Show/hide
Query:  EDFHGSFIDRWLKIEACSSQKDISLVAITCWSIWSDRNKVTHGE-SIPPVQARRKWIKEHLDSFLKAISHDQPKISRGRRNNPSPEGARWIPPPDDVWKL
        + F  SF+D  L I + S+ +D+ L   T W+IWS+RN + H E  + P+Q   +  +  ++ F  + S D   +         P  +RW PPP  V+K+
Subjt:  EDFHGSFIDRWLKIEACSSQKDISLVAITCWSIWSDRNKVTHGE-SIPPVQARRKWIKEHLDSFLKAISHDQPKISRGRRNNPSPEGARWIPPPDDVWKL

Query:  NTDVACPSSSPESGLGISI
        N D A       S +G+ I
Subjt:  NTDVACPSSSPESGLGISI

XP_030940249.1 probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Quercus lobata]5.1e-0731.3Show/hide
Query:  SFID-RW-LKIEACSSQKDISLVAITCWSIWSDRNKVTHGESIPPVQARRKWIKEHLDSFLKAISHDQPKISRGRRNNPSPEGARWIPPPDDVWKLNTDV
        SF+D  W L ++    ++ ++ VA T W++W +RN+V  G +    +    W  E+L  +  AI HD+P +S  +      +  RWIPP D ++K+N D 
Subjt:  SFID-RW-LKIEACSSQKDISLVAITCWSIWSDRNKVTHGESIPPVQARRKWIKEHLDSFLKAISHDQPKISRGRRNNPSPEGARWIPPPDDVWKLNTDV

Query:  ACPSSSPESGLGISI
        A        G+G+ I
Subjt:  ACPSSSPESGLGISI

XP_030964512.1 uncharacterized protein LOC115985749 [Quercus lobata]1.5e-0630.37Show/hide
Query:  FGNIPITVFLEEDFH-----GSFIDRWLKIEACSSQKDISLVAITCWSIWSDRNKVTHGE-SIPPVQARRKWIKEHLDSFLKAISHDQPKISRGRRNNPS
        F ++    +LE  FH      SF+D  L I + S+ +D+ L   T W+IWS+RN   H +  + P+Q   K  +  ++ F  + S D   +         
Subjt:  FGNIPITVFLEEDFH-----GSFIDRWLKIEACSSQKDISLVAITCWSIWSDRNKVTHGE-SIPPVQARRKWIKEHLDSFLKAISHDQPKISRGRRNNPS

Query:  PEGARWIPPPDDVWKLNTDVACPSSSPESGLGISI
        P  +RW PPP  V+K+N D A       S +G+ I
Subjt:  PEGARWIPPPDDVWKLNTDVACPSSSPESGLGISI

TrEMBL top hitse value%identityAlignment
A0A6J1BQ49 uncharacterized protein LOC1110047861.7e-1136.28Show/hide
Query:  SFIDRWLKIEACSSQKDISLVAITCWSIWSDRNKVTHGESIPPVQARRKWIKEHLDSFLKAISHDQPKISRGRRNNPSPEGARWIPPPDDVWKLNTDVAC
        SF+D WL +    + +   L A T W+IW DRN   HG S+     R  WI  +  ++ +A   +  +IS  + + P P   RW+PP D   K+N+D AC
Subjt:  SFIDRWLKIEACSSQKDISLVAITCWSIWSDRNKVTHGESIPPVQARRKWIKEHLDSFLKAISHDQPKISRGRRNNPSPEGARWIPPPDDVWKLNTDVAC

Query:  PSSSPESGLGISI
         S+S  +GLG+ I
Subjt:  PSSSPESGLGISI

A0A6J1DX30 uncharacterized protein LOC1110248741.3e-1133.58Show/hide
Query:  PITVFLEEDFHGSFIDRWLKIEACSSQKDISLVAITCWSIWSDRNKVTHGESIPPVQARRKWIKEHLDSFLKA-ISHDQPKISRGRRNNPSPEGARWIPP
        P    L  + + SF++ W  +      KD++L AIT W IW+DRN + HG+ + PV+ + +W+   LDS  +A +S+  P+     ++N  P    W P 
Subjt:  PITVFLEEDFHGSFIDRWLKIEACSSQKDISLVAITCWSIWSDRNKVTHGESIPPVQARRKWIKEHLDSFLKA-ISHDQPKISRGRRNNPSPEGARWIPP

Query:  PDDVWKLNTDVACPSSSPESGLGISIPNWLCNLV
             KLNTD AC  +S  +  G  I +  C+LV
Subjt:  PDDVWKLNTDVACPSSSPESGLGISIPNWLCNLV

A0A803NQ77 Uncharacterized protein7.2e-0732.5Show/hide
Query:  SSQKDISLVAITC--WSIWSDRNKVTHGESIPPVQARRKWIKEHLDSFLKAISHDQPKISRGRRNNPS-----PEGAR----WIPPPDDVWKLNTDVACP
        ++  D+ L  I C  W+IWS+RNK THG    PV     +   +LD F KA S  Q       + + S     P  +R    W  PP  ++KLN D AC 
Subjt:  SSQKDISLVAITC--WSIWSDRNKVTHGESIPPVQARRKWIKEHLDSFLKAISHDQPKISRGRRNNPS-----PEGAR----WIPPPDDVWKLNTDVACP

Query:  SSSPESGLGISIPNWLCNLV
         +    G G  I + + ++V
Subjt:  SSSPESGLGISIPNWLCNLV

A0A803P8B5 Uncharacterized protein3.8e-0832.74Show/hide
Query:  DRWLKIEACSSQKDISLVAITCWSIWSDRNKVTHGESIPPVQARRKWIKEHLDSFLKAISHDQPKISRGRRNNPS---PEGARWIPPPDDVWKLNTDVAC
        D  L + +  S+ ++  +  T WSIWS+RNKV HG+   P +     +  +  +FL A +   P  S+ +   P    P  A W PP  D +KLN DVA 
Subjt:  DRWLKIEACSSQKDISLVAITCWSIWSDRNKVTHGESIPPVQARRKWIKEHLDSFLKAISHDQPKISRGRRNNPS---PEGARWIPPPDDVWKLNTDVAC

Query:  PSSSPESGLGISI
          ++   G+G  I
Subjt:  PSSSPESGLGISI

A0A803PHB2 Uncharacterized protein1.2e-0633.33Show/hide
Query:  DRWLKIEACSSQKDISLVAITCWSIWSDRNKVTHGESIPPVQARRKWIKEHLDSFLKAISHDQPKISRGRRNNPS---PEGARWIPPPDDVWKLNTDVA
        D  L + +  S  ++  +    WSIWS+RNKV HG+   P +    +   +  +FL A +   P+ S+ +   P    P  A W PP  D +KLN DVA
Subjt:  DRWLKIEACSSQKDISLVAITCWSIWSDRNKVTHGESIPPVQARRKWIKEHLDSFLKAISHDQPKISRGRRNNPS---PEGARWIPPPDDVWKLNTDVA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATATCAAATTGGAAGGAATTCAAGCTAGTCATTCTCATCTTAACCTCGTGCAAGAGAGATTTGGAAACATACCTATAACAGTCTTTCTGGAGGAGGACTTTCATGG
CAGTTTCATTGATCGTTGGTTGAAGATTGAGGCATGTTCGTCCCAGAAGGATATCAGCTTAGTCGCCATTACTTGTTGGTCTATATGGAGTGATAGAAACAAAGTTACTC
ACGGTGAATCCATTCCTCCAGTTCAAGCTCGAAGAAAATGGATAAAAGAGCACCTGGATTCTTTTTTGAAAGCGATCTCACATGACCAGCCTAAGATTTCTCGCGGTAGA
AGGAATAATCCATCCCCTGAAGGCGCCCGTTGGATTCCGCCTCCGGATGATGTCTGGAAGCTTAATACCGATGTTGCATGTCCCTCTTCAAGCCCAGAATCTGGCCTGGG
CATCTCAATTCCCAACTGGCTTTGTAATCTGGTCACTTTGGACCAATTTTCCTCTGCCCATGTGGCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATATCAAATTGGAAGGAATTCAAGCTAGTCATTCTCATCTTAACCTCGTGCAAGAGAGATTTGGAAACATACCTATAACAGTCTTTCTGGAGGAGGACTTTCATGG
CAGTTTCATTGATCGTTGGTTGAAGATTGAGGCATGTTCGTCCCAGAAGGATATCAGCTTAGTCGCCATTACTTGTTGGTCTATATGGAGTGATAGAAACAAAGTTACTC
ACGGTGAATCCATTCCTCCAGTTCAAGCTCGAAGAAAATGGATAAAAGAGCACCTGGATTCTTTTTTGAAAGCGATCTCACATGACCAGCCTAAGATTTCTCGCGGTAGA
AGGAATAATCCATCCCCTGAAGGCGCCCGTTGGATTCCGCCTCCGGATGATGTCTGGAAGCTTAATACCGATGTTGCATGTCCCTCTTCAAGCCCAGAATCTGGCCTGGG
CATCTCAATTCCCAACTGGCTTTGTAATCTGGTCACTTTGGACCAATTTTCCTCTGCCCATGTGGCGTAA
Protein sequenceShow/hide protein sequence
MNIKLEGIQASHSHLNLVQERFGNIPITVFLEEDFHGSFIDRWLKIEACSSQKDISLVAITCWSIWSDRNKVTHGESIPPVQARRKWIKEHLDSFLKAISHDQPKISRGR
RNNPSPEGARWIPPPDDVWKLNTDVACPSSSPESGLGISIPNWLCNLVTLDQFSSAHVA