; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0009046 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0009046
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr9:34561388..34561810
RNA-Seq ExpressionLag0009046
SyntenyLag0009046
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_010682933.1 PREDICTED: uncharacterized protein LOC104897695 [Beta vulgaris subsp. vulgaris]2.6e-3655.15Show/hide
Query:  NDLGQLLGIDMSNSIWQYLGMPTQTERNKKDVFKRLRERVWMVLQGWKGNIFSVGGKEVLIKSIVQAIPNYTMSCFKIPKNICEEINRTCARFWWGSSES
        ND+  L G+       +YLG+PT   R+KK VF  L+ERVW  LQGWK  + S  GKEVL+K+++Q+IP Y MS F IP  I  EIN  CARFWWGS  +
Subjt:  NDLGQLLGIDMSNSIWQYLGMPTQTERNKKDVFKRLRERVWMVLQGWKGNIFSVGGKEVLIKSIVQAIPNYTMSCFKIPKNICEEINRTCARFWWGSSES

Query:  KRKAHLMSWDKMCISKCKGGMGFRDLQRFNQAMLAK
        +R+ H +SW+KMC+ K  GGMGFRDL+ FNQA+LAK
Subjt:  KRKAHLMSWDKMCISKCKGGMGFRDLQRFNQAMLAK

XP_022145148.1 uncharacterized protein LOC111014662 [Momordica charantia]1.3e-4055.71Show/hide
Query:  MANDLGQLLGIDMSNSIWQYLGMPTQTERNKKDVFKRLRERVWMVLQGWKGNIFSVGGKEVLIKSIVQAIPNYTMSCFKIPKNICEEINRTCARFWWGSS
        +A ++   L +  +N + QYLG+P+QT RNK  VF  +  RVW  LQGWK  +FS GGKEVLIK++ QAIPNY+MSCF+ P N+C+EIN   ARFWWGS+
Subjt:  MANDLGQLLGIDMSNSIWQYLGMPTQTERNKKDVFKRLRERVWMVLQGWKGNIFSVGGKEVLIKSIVQAIPNYTMSCFKIPKNICEEINRTCARFWWGSS

Query:  ESKRKAHLMSWDKMCISKCKGGMGFRDLQRFNQAMLAKIS
        + ++K H  SW ++C+SK +GG+GF+DL  FNQAMLAK S
Subjt:  ESKRKAHLMSWDKMCISKCKGGMGFRDLQRFNQAMLAKIS

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]1.5e-3652.67Show/hide
Query:  LLGIDMSNSIWQYLGMPTQTERNKKDVFKRLRERVWMVLQGWKGNIFSVGGKEVLIKSIVQAIPNYTMSCFKIPKNICEEINRTCARFWWGSSESKRKAH
        +L ++M     QYLG+PT   RN++  F  +++RVW  LQGWK  +FS+GGKEVLIK++ QAIP YTMSCF++PK +  E +   ARFWWGSS+  +K H
Subjt:  LLGIDMSNSIWQYLGMPTQTERNKKDVFKRLRERVWMVLQGWKGNIFSVGGKEVLIKSIVQAIPNYTMSCFKIPKNICEEINRTCARFWWGSSESKRKAH

Query:  LMSWDKMCISKCKGGMGFRDLQRFNQAMLAK
         ++W+ + + KC+GGMGFRDL+ FN+A+LAK
Subjt:  LMSWDKMCISKCKGGMGFRDLQRFNQAMLAK

XP_023909336.1 uncharacterized protein LOC112020997 [Quercus suber]3.3e-3647.79Show/hide
Query:  NDLGQLLGIDMSNSIWQYLGMPTQTERNKKDVFKRLRERVWMVLQGWKGNIFSVGGKEVLIKSIVQAIPNYTMSCFKIPKNICEEINRTCARFWWGSSES
        N +   LG+ +S+ + +YLG+P+   R KK  F  +RER+W  +QGWK  + S  GKEVLIKSI+QA+P Y+M+CFK+P+++C++I     +FWWG    
Subjt:  NDLGQLLGIDMSNSIWQYLGMPTQTERNKKDVFKRLRERVWMVLQGWKGNIFSVGGKEVLIKSIVQAIPNYTMSCFKIPKNICEEINRTCARFWWGSSES

Query:  KRKAHLMSWDKMCISKCKGGMGFRDLQRFNQAMLAK
        +RK H ++W+KMC+ KC+GG+GFRD++ FN A+L K
Subjt:  KRKAHLMSWDKMCISKCKGGMGFRDLQRFNQAMLAK

XP_030495108.1 uncharacterized protein LOC115710895 [Cannabis sativa]1.3e-3553.62Show/hide
Query:  MANDLGQLLGIDMSNSIWQYLGMPTQTERNKKDVFKRLRERVWMVLQGWKGNIFSVGGKEVLIKSIVQAIPNYTMSCFKIPKNICEEINRTCARFWWGSS
        MA  L   LG+ +  +  +YLGMPT   RNKK VF ++R++V   LQGWK  +FS  GKE+LIK+++QA+P Y MSCF+I K I  EI    ARFWWGS+
Subjt:  MANDLGQLLGIDMSNSIWQYLGMPTQTERNKKDVFKRLRERVWMVLQGWKGNIFSVGGKEVLIKSIVQAIPNYTMSCFKIPKNICEEINRTCARFWWGSS

Query:  ESKRKAHLMSWDKMCISKCKGGMGFRDLQRFNQAMLAK
        ++K K H  +W K+C  K +GGMGFRDL+ FNQA+LAK
Subjt:  ESKRKAHLMSWDKMCISKCKGGMGFRDLQRFNQAMLAK

TrEMBL top hitse value%identityAlignment
A0A6J1CV63 uncharacterized protein LOC1110146626.4e-4155.71Show/hide
Query:  MANDLGQLLGIDMSNSIWQYLGMPTQTERNKKDVFKRLRERVWMVLQGWKGNIFSVGGKEVLIKSIVQAIPNYTMSCFKIPKNICEEINRTCARFWWGSS
        +A ++   L +  +N + QYLG+P+QT RNK  VF  +  RVW  LQGWK  +FS GGKEVLIK++ QAIPNY+MSCF+ P N+C+EIN   ARFWWGS+
Subjt:  MANDLGQLLGIDMSNSIWQYLGMPTQTERNKKDVFKRLRERVWMVLQGWKGNIFSVGGKEVLIKSIVQAIPNYTMSCFKIPKNICEEINRTCARFWWGSS

Query:  ESKRKAHLMSWDKMCISKCKGGMGFRDLQRFNQAMLAKIS
        + ++K H  SW ++C+SK +GG+GF+DL  FNQAMLAK S
Subjt:  ESKRKAHLMSWDKMCISKCKGGMGFRDLQRFNQAMLAKIS

A0A6J1DAR4 uncharacterized protein LOC1110189547.3e-3752.67Show/hide
Query:  LLGIDMSNSIWQYLGMPTQTERNKKDVFKRLRERVWMVLQGWKGNIFSVGGKEVLIKSIVQAIPNYTMSCFKIPKNICEEINRTCARFWWGSSESKRKAH
        +L ++M     QYLG+PT   RN++  F  +++RVW  LQGWK  +FS+GGKEVLIK++ QAIP YTMSCF++PK +  E +   ARFWWGSS+  +K H
Subjt:  LLGIDMSNSIWQYLGMPTQTERNKKDVFKRLRERVWMVLQGWKGNIFSVGGKEVLIKSIVQAIPNYTMSCFKIPKNICEEINRTCARFWWGSSESKRKAH

Query:  LMSWDKMCISKCKGGMGFRDLQRFNQAMLAK
         ++W+ + + KC+GGMGFRDL+ FN+A+LAK
Subjt:  LMSWDKMCISKCKGGMGFRDLQRFNQAMLAK

A0A803P8L6 Uncharacterized protein1.4e-3554.35Show/hide
Query:  MANDLGQLLGIDMSNSIWQYLGMPTQTERNKKDVFKRLRERVWMVLQGWKGNIFSVGGKEVLIKSIVQAIPNYTMSCFKIPKNICEEINRTCARFWWGSS
        +A  L   LG+ +  +  +YLGMPT   +NKK+VF ++R+RV   LQGWK  +FS  GKE+LIK+IVQA+P Y MSCF+I K I  EI    A FWWG+S
Subjt:  MANDLGQLLGIDMSNSIWQYLGMPTQTERNKKDVFKRLRERVWMVLQGWKGNIFSVGGKEVLIKSIVQAIPNYTMSCFKIPKNICEEINRTCARFWWGSS

Query:  ESKRKAHLMSWDKMCISKCKGGMGFRDLQRFNQAMLAK
          K K H  SW+KMC  K +GGMGFR+L+ FNQA+LAK
Subjt:  ESKRKAHLMSWDKMCISKCKGGMGFRDLQRFNQAMLAK

A0A803PAN7 Uncharacterized protein1.8e-3551.54Show/hide
Query:  LGIDMSNSIWQYLGMPTQTERNKKDVFKRLRERVWMVLQGWKGNIFSVGGKEVLIKSIVQAIPNYTMSCFKIPKNICEEINRTCARFWWGSSESKRKAHL
        LG+++     +YLG+P    R+KK+VF  +R ++   LQGWK ++FS  G+EVL+K+++QAIP Y MSCF++PK + ++I+   ARFWWGSSESK K H 
Subjt:  LGIDMSNSIWQYLGMPTQTERNKKDVFKRLRERVWMVLQGWKGNIFSVGGKEVLIKSIVQAIPNYTMSCFKIPKNICEEINRTCARFWWGSSESKRKAHL

Query:  MSWDKMCISKCKGGMGFRDLQRFNQAMLAK
          W+K+C  K KGGMGF+DL++FNQ++LAK
Subjt:  MSWDKMCISKCKGGMGFRDLQRFNQAMLAK

A0A803PCN1 Uncharacterized protein1.8e-3554.48Show/hide
Query:  LGQLLGIDMSNSIWQYLGMPTQTERNKKDVFKRLRERVWMVLQGWKGNIFSVGGKEVLIKSIVQAIPNYTMSCFKIPKNICEEINRTCARFWWGSSESKR
        L   LG+  + +  +YLG+P    +NKK+ F  +R +VW  LQGWK  +FS  G+EVLIKSI+QAIP Y MSCF+I K I +EI    ARFWWGSS +K 
Subjt:  LGQLLGIDMSNSIWQYLGMPTQTERNKKDVFKRLRERVWMVLQGWKGNIFSVGGKEVLIKSIVQAIPNYTMSCFKIPKNICEEINRTCARFWWGSSESKR

Query:  KAHLMSWDKMCISKCKGGMGFRDLQRFNQAMLAK
        + H  SW+K+C  K  GGMGFRDL+ FNQA+LAK
Subjt:  KAHLMSWDKMCISKCKGGMGFRDLQRFNQAMLAK

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657503.3e-1833.33Show/hide
Query:  MPTQTERNKKDVFKRLRERVWMVLQGWKGNIFSVGGKEVLIKSIVQAIPNYTMSCFKIPKNICEEINRTCARFWWGSSESKRKAHLMSWDKMCISKCKGG
        MP   +R  KD F  + ERV   + GW+    S  G+  L K+++ ++P ++MS   +P++I   +++    F WGS+  K+K HL+ W K+C  K +GG
Subjt:  MPTQTERNKKDVFKRLRERVWMVLQGWKGNIFSVGGKEVLIKSIVQAIPNYTMSCFKIPKNICEEINRTCARFWWGSSESKRKAHLMSWDKMCISKCKGG

Query:  MGFRDLQRFNQAMLAKI
        +G R  +  N+A+++K+
Subjt:  MGFRDLQRFNQAMLAKI

P93295 Uncharacterized mitochondrial protein AtMg003103.4e-1550.68Show/hide
Query:  AIPNYTMSCFKIPKNICEEINRTCARFWWGSSESKRKAHLMSWDKMCISK-CKGGMGFRDLQRFNQAMLAKIS
        A+P Y MSCF++ K +C+++      FWW S E+KRK   ++W K+C SK   GG+GFRDL  FNQA+LAK S
Subjt:  AIPNYTMSCFKIPKNICEEINRTCARFWWGSSESKRKAHLMSWDKMCISK-CKGGMGFRDLQRFNQAMLAKIS

Arabidopsis top hitse value%identityAlignment
AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein3.5e-1529.51Show/hide
Query:  QYLGMPTQTERNKKDVFKRLRERVWMVLQGWKGNIFSVGGKEVLIKSIVQAIPNYTMSCFKIPKNICEEINRTCARFWWGSSESKRKAHLMSWDKMCISK
        +YLG+P  T++     +  L E++ + +  W     S  G+  LI S++ ++ N+ MS F++P    +EI+  C+ F W   E   K   ++W  +C  K
Subjt:  QYLGMPTQTERNKKDVFKRLRERVWMVLQGWKGNIFSVGGKEVLIKSIVQAIPNYTMSCFKIPKNICEEINRTCARFWWGSSESKRKAHLMSWDKMCISK

Query:  CKGGMGFRDLQRFNQAMLAKIS
         +GG+G R L+  N+     IS
Subjt:  CKGGMGFRDLQRFNQAMLAKIS

AT4G29090.1 Ribonuclease H-like superfamily protein5.9e-1541.43Show/hide
Query:  AIPNYTMSCFKIPKNICEEINRTCARFWWGSSESKRKAHLMSWDKMCISKCKGGMGFRDLQRFNQAMLAK
        A+P YTM+CF +PK +C++I    A FWW + +  +  H  +WD +   K +GG+GF+D++ FN A+L K
Subjt:  AIPNYTMSCFKIPKNICEEINRTCARFWWGSSESKRKAHLMSWDKMCISKCKGGMGFRDLQRFNQAMLAK

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.4e-1650.68Show/hide
Query:  AIPNYTMSCFKIPKNICEEINRTCARFWWGSSESKRKAHLMSWDKMCISK-CKGGMGFRDLQRFNQAMLAKIS
        A+P Y MSCF++ K +C+++      FWW S E+KRK   ++W K+C SK   GG+GFRDL  FNQA+LAK S
Subjt:  AIPNYTMSCFKIPKNICEEINRTCARFWWGSSESKRKAHLMSWDKMCISK-CKGGMGFRDLQRFNQAMLAKIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAACGATTTAGGCCAGCTTCTTGGGATAGACATGTCTAATTCCATATGGCAATATCTAGGGATGCCAACTCAGACTGAAAGAAACAAGAAAGACGTGTTTAAAAG
ATTGAGAGAAAGAGTTTGGATGGTCTTGCAAGGGTGGAAAGGCAACATTTTCTCTGTTGGTGGAAAAGAGGTGCTAATAAAGTCCATAGTGCAAGCAATCCCGAACTACA
CGATGAGCTGTTTTAAGATTCCCAAGAACATATGTGAAGAGATCAATAGAACTTGTGCTCGTTTCTGGTGGGGTTCATCTGAGTCTAAAAGGAAAGCCCACTTGATGAGT
TGGGACAAGATGTGCATAAGCAAATGCAAGGGTGGAATGGGATTTAGAGACCTCCAACGGTTCAATCAAGCGATGTTGGCAAAGATCAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAAACGATTTAGGCCAGCTTCTTGGGATAGACATGTCTAATTCCATATGGCAATATCTAGGGATGCCAACTCAGACTGAAAGAAACAAGAAAGACGTGTTTAAAAG
ATTGAGAGAAAGAGTTTGGATGGTCTTGCAAGGGTGGAAAGGCAACATTTTCTCTGTTGGTGGAAAAGAGGTGCTAATAAAGTCCATAGTGCAAGCAATCCCGAACTACA
CGATGAGCTGTTTTAAGATTCCCAAGAACATATGTGAAGAGATCAATAGAACTTGTGCTCGTTTCTGGTGGGGTTCATCTGAGTCTAAAAGGAAAGCCCACTTGATGAGT
TGGGACAAGATGTGCATAAGCAAATGCAAGGGTGGAATGGGATTTAGAGACCTCCAACGGTTCAATCAAGCGATGTTGGCAAAGATCAGCTAG
Protein sequenceShow/hide protein sequence
MANDLGQLLGIDMSNSIWQYLGMPTQTERNKKDVFKRLRERVWMVLQGWKGNIFSVGGKEVLIKSIVQAIPNYTMSCFKIPKNICEEINRTCARFWWGSSESKRKAHLMS
WDKMCISKCKGGMGFRDLQRFNQAMLAKIS