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Lag0009050 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0009050
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionexpressed protein localized to the inner membrane of the chloroplast.
Genome locationchr9:34609298..34612981
RNA-Seq ExpressionLag0009050
SyntenyLag0009050
Gene Ontology termsGO:0009706 - chloroplast inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010970.1 hypothetical protein SDJN02_27768, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-7391.72Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQAPKLAIQKKCLRTNNKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR
        MAACFAPSLSVSGGLIKASDLSSKS+SFGQAPKLAIQ+KC RTN+KLSVRAEYNDGGR+GGG+FVAGFLLGGAVFGTLAYIFAPQIRRS+LNEDEYGFRR
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQAPKLAIQKKCLRTNNKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR

Query:  AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM
        A+RPIYYD+GLEKTRQTLN KI QLNSAIDNVSSRLRGGN TP+VPVEADPEIEATM
Subjt:  AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM

XP_022148671.1 uncharacterized protein LOC111017273 [Momordica charantia]3.5e-7495.54Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQAPKLAIQKKCLRTNNKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR
        MAACFAPSLSVSGGLIKASDLSSKS++FGQAPKLAIQKKCLRTN KLSVRAEYND GR GGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQAPKLAIQKKCLRTNNKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR

Query:  AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM
        AKRPIYYDEGLEKTRQTLNAKI QLNSAIDNVSSRLRGGNNTPAVPVEADPE EATM
Subjt:  AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM

XP_022944447.1 uncharacterized protein LOC111448897 [Cucurbita moschata]2.9e-7391.72Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQAPKLAIQKKCLRTNNKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR
        MAACFAPSLSVSGGLIKASDLSSKS+SFGQAPKLAIQ+KC RT++KLSVRAEYNDGGR+GGG+FVAGFLLGGAVFGTLAYIFAPQIRRS+LNEDEYGFRR
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQAPKLAIQKKCLRTNNKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR

Query:  AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM
        A+RPIYYD+GLEKTRQTLN KI QLNSAIDNVSSRLRGGN TPAVPVEADPEIEATM
Subjt:  AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM

XP_023512433.1 uncharacterized protein LOC111777191 [Cucurbita pepo subsp. pepo]1.0e-7392.36Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQAPKLAIQKKCLRTNNKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR
        MAACFAPSLSVSGGLIKASDLSSKS+SFGQ PKLAIQ+KC RTN+KLSVRAEYNDGGRSGGG+FVAGFLLGGAVFGTLAYIFAPQIRRS+LNEDEYGFRR
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQAPKLAIQKKCLRTNNKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR

Query:  AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM
        A+RPIYYD+GLEKTRQTLN KI QLNSAIDNVSSRLRGGN TPAVPVEADPEIEATM
Subjt:  AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM

XP_038902580.1 uncharacterized protein LOC120089235 [Benincasa hispida]3.1e-7596.18Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQAPKLAIQKKCLRTNNKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR
        MAACFAPSLSVSGGLIKASDLSSKS+SFGQAPKLAIQ+K  RTN KLSVRAEYNDG RSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQAPKLAIQKKCLRTNNKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR

Query:  AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM
        AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM
Subjt:  AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM

TrEMBL top hitse value%identityAlignment
A0A1S3C9M4 uncharacterized protein LOC1034983953.2e-7392.41Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQAPKLAIQKKCLRTNNKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR
        MAACFAPSLSVSGGLIKASDLSSKSVSFGQ PKLAI++KC +TN+KLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAY+FAPQIRRS+LNEDE+GFRR
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQAPKLAIQKKCLRTNNKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR

Query:  AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPV-EADPEIEATM
        AKRP+YYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPV EA+PEIEATM
Subjt:  AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPV-EADPEIEATM

A0A5D3CQ66 Uncharacterized protein3.2e-7392.41Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQAPKLAIQKKCLRTNNKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR
        MAACFAPSLSVSGGLIKASDLSSKSVSFGQ PKLAI++KC +TN+KLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAY+FAPQIRRS+LNEDE+GFRR
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQAPKLAIQKKCLRTNNKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR

Query:  AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPV-EADPEIEATM
        AKRP+YYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPV EA+PEIEATM
Subjt:  AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPV-EADPEIEATM

A0A6J1D647 uncharacterized protein LOC1110172731.7e-7495.54Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQAPKLAIQKKCLRTNNKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR
        MAACFAPSLSVSGGLIKASDLSSKS++FGQAPKLAIQKKCLRTN KLSVRAEYND GR GGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQAPKLAIQKKCLRTNNKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR

Query:  AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM
        AKRPIYYDEGLEKTRQTLNAKI QLNSAIDNVSSRLRGGNNTPAVPVEADPE EATM
Subjt:  AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM

A0A6J1FVP6 uncharacterized protein LOC1114488971.4e-7391.72Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQAPKLAIQKKCLRTNNKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR
        MAACFAPSLSVSGGLIKASDLSSKS+SFGQAPKLAIQ+KC RT++KLSVRAEYNDGGR+GGG+FVAGFLLGGAVFGTLAYIFAPQIRRS+LNEDEYGFRR
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQAPKLAIQKKCLRTNNKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR

Query:  AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM
        A+RPIYYD+GLEKTRQTLN KI QLNSAIDNVSSRLRGGN TPAVPVEADPEIEATM
Subjt:  AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM

A0A6J1JGK4 uncharacterized protein LOC1114843142.4e-7391.72Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQAPKLAIQKKCLRTNNKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR
        MAAC APSLSVSGGLIKASDLSSKS+SFGQAPKLAIQ+KC R+N+KLSVRAEYNDGGRSGGG+FVAGFLLGGAVFGTLAYIFAPQIRRS+LNEDEYGFRR
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQAPKLAIQKKCLRTNNKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR

Query:  AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM
        A+RPIYYD+GLEKTRQTLN KI QLNSAIDNVSSRLRGGN TPAVPVEADPEIEATM
Subjt:  AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G42960.1 expressed protein localized to the inner membrane of the chloroplast.2.4e-1742.22Show/hide
Query:  SVSFGQAPKLAIQKKCLRTNNKLSVRAEYNDGGRSGG-GDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDE--GLEKTRQTLNAK
        SVSFG      +     RT   L++++ Y D   SG  G FV GF+LGG + G L  ++APQI +++   D     R      YDE   LEKTR+ L  K
Subjt:  SVSFGQAPKLAIQKKCLRTNNKLSVRAEYNDGGRSGG-GDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDE--GLEKTRQTLNAK

Query:  ISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEAT
        I+QLNSAID+VSS+L+   +TP     +  EIEAT
Subjt:  ISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEAT

AT3G02900.1 unknown protein1.5e-3553.05Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQAPKLAIQKKCLRTNNKLSVRAEYNDGGRSGG-GDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFR
        MA+  A  +S SG     +  +  ++   ++  L +Q K  R ++KLSV A Y  G + GG  DFV GFLLG AVFGTLAYIFAPQIRRS+L+E+EYGF+
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSVSFGQAPKLAIQKKCLRTNNKLSVRAEYNDGGRSGG-GDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFR

Query:  RAKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGG-------NNTPAVPVEADPEIEAT
        + ++P+YYDEGLE+ R+ LN KI QLNSAID VSSRL+GG        ++P+VPVE D E EAT
Subjt:  RAKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGG-------NNTPAVPVEADPEIEAT

AT3G02900.2 unknown protein4.0e-3661.83Show/hide
Query:  LAIQKKCLRTNNKLSVRAEYNDGGRSGG-GDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTRQTLNAKISQLNSAIDNV
        L +Q K  R ++KLSV A Y  G + GG  DFV GFLLG AVFGTLAYIFAPQIRRS+L+E+EYGF++ ++P+YYDEGLE+ R+ LN KI QLNSAID V
Subjt:  LAIQKKCLRTNNKLSVRAEYNDGGRSGG-GDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTRQTLNAKISQLNSAIDNV

Query:  SSRLRGG-------NNTPAVPVEADPEIEAT
        SSRL+GG        ++P+VPVE D E EAT
Subjt:  SSRLRGG-------NNTPAVPVEADPEIEAT

AT5G16660.1 unknown protein4.9e-4263.69Show/hide
Query:  MAACFAPS-LSVSG----GLIKASDLS--SKSVSFGQAPKLAIQKKCLRTNNKLSVRAEYNDGGRSG-GGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLN
        MA+C A + LS+SG      +KA+ LS  +K  S  +   L I KK  RT  K SV A Y DG RSG  GDF+AGFLLGGAVFG +AYIFAPQIRRS+LN
Subjt:  MAACFAPS-LSVSG----GLIKASDLS--SKSVSFGQAPKLAIQKKCLRTNNKLSVRAEYNDGGRSG-GGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLN

Query:  -EDEYGFRRAKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRG-GNNTPA--VPVEADPEIEAT
         EDEYGF + K+P YYDEGLEKTR+TLN KI QLNSAIDNVSSRLRG   NT +  VPVE DPE+EAT
Subjt:  -EDEYGFRRAKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRG-GNNTPA--VPVEADPEIEAT

AT5G16660.2 unknown protein7.8e-4063.1Show/hide
Query:  MAACFAPS-LSVSG----GLIKASDLS--SKSVSFGQAPKLAIQKKCLRTNNKLSVRAEYNDGGRSG-GGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLN
        MA+C A + LS+SG      +KA+ LS  +K  S  +   L I KK  RT  K SV A   DG RSG  GDF+AGFLLGGAVFG +AYIFAPQIRRS+LN
Subjt:  MAACFAPS-LSVSG----GLIKASDLS--SKSVSFGQAPKLAIQKKCLRTNNKLSVRAEYNDGGRSG-GGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLN

Query:  -EDEYGFRRAKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRG-GNNTPA--VPVEADPEIEAT
         EDEYGF + K+P YYDEGLEKTR+TLN KI QLNSAIDNVSSRLRG   NT +  VPVE DPE+EAT
Subjt:  -EDEYGFRRAKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRG-GNNTPA--VPVEADPEIEAT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCTTGCTTTGCTCCTTCGCTGTCCGTATCTGGAGGATTGATCAAGGCCTCAGATCTCTCCTCAAAGTCCGTTTCCTTTGGGCAAGCACCAAAACTCGCCATTCA
GAAGAAGTGCTTGAGAACCAACAACAAGTTATCAGTCCGTGCTGAGTACAACGATGGTGGTAGAAGTGGAGGTGGGGATTTTGTTGCTGGTTTTCTTCTTGGGGGTGCTG
TATTTGGAACTTTAGCTTACATTTTCGCTCCGCAGATCAGGAGATCTCTACTAAATGAAGATGAGTATGGTTTTAGGAGGGCCAAGCGTCCAATCTACTACGACGAAGGT
CTAGAGAAAACCAGACAGACGTTGAATGCAAAAATAAGCCAGTTGAATTCCGCCATTGACAATGTATCTTCACGTCTGAGAGGTGGCAACAACACTCCAGCTGTGCCAGT
TGAAGCCGATCCTGAGATAGAAGCTACCATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCTTGCTTTGCTCCTTCGCTGTCCGTATCTGGAGGATTGATCAAGGCCTCAGATCTCTCCTCAAAGTCCGTTTCCTTTGGGCAAGCACCAAAACTCGCCATTCA
GAAGAAGTGCTTGAGAACCAACAACAAGTTATCAGTCCGTGCTGAGTACAACGATGGTGGTAGAAGTGGAGGTGGGGATTTTGTTGCTGGTTTTCTTCTTGGGGGTGCTG
TATTTGGAACTTTAGCTTACATTTTCGCTCCGCAGATCAGGAGATCTCTACTAAATGAAGATGAGTATGGTTTTAGGAGGGCCAAGCGTCCAATCTACTACGACGAAGGT
CTAGAGAAAACCAGACAGACGTTGAATGCAAAAATAAGCCAGTTGAATTCCGCCATTGACAATGTATCTTCACGTCTGAGAGGTGGCAACAACACTCCAGCTGTGCCAGT
TGAAGCCGATCCTGAGATAGAAGCTACCATGTAA
Protein sequenceShow/hide protein sequence
MAACFAPSLSVSGGLIKASDLSSKSVSFGQAPKLAIQKKCLRTNNKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEG
LEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM