; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0009064 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0009064
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag/pol polyprotein-maize retrotransposon Hopscotch
Genome locationchr9:34862019..34863165
RNA-Seq ExpressionLag0009064
SyntenyLag0009064
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QWX09785.1 hydroxymethylglutaryl-CoA synthase [Pistacia terebinthus subsp. palaestina]1.1e-2434.25Show/hide
Query:  TVKLDEKNYLLWRGMVLAILRA-------------------------------------------LSGWLFGSMSPAIAADVVSFKTPREVWKALEEVYG
        ++KLD  N+LLW  +VL ++R                                            L GWL+ +M+P IA+ ++   T +E+W A +E+ G
Subjt:  TVKLDEKNYLLWRGMVLAILRA-------------------------------------------LSGWLFGSMSPAIAADVVSFKTPREVWKALEEVYG

Query:  ATSKARVNQMRGILQNTKKGATKMIKYMAVMKQAVDNLKLASNPVSLSDQISYVLAGLDSEYVPIVCSIEDKNIKTWQELSSILINFEGTLARYSPITNV
        A +K+RV   +G LQ T+KG  KM +Y+  MK   DNL LA +P+SLSD I+ +L GLD+EY PIV  + DK   +W EL + L+ FE  L + +   N 
Subjt:  ATSKARVNQMRGILQNTKKGATKMIKYMAVMKQAVDNLKLASNPVSLSDQISYVLAGLDSEYVPIVCSIEDKNIKTWQELSSILINFEGTLARYSPITNV

Query:  NVGELSDLSAYLVLNRTGN
         +  LS  +A++ +NR  N
Subjt:  NVGELSDLSAYLVLNRTGN

XP_022142770.1 uncharacterized protein LOC111012809 [Momordica charantia]2.4e-2442.13Show/hide
Query:  MSPAIAADVVSFKTPREVWKALEEVYGATSKARVNQMRGILQNTKKGATKMIKYMAVMKQAVDNLKLASNPVSLSDQISYVLAGLDSEYVPIVCSIEDKN
        MSP IA DV+S  T R+VWKALE++Y   +KAR+NQ++  LQ T+K   KM  Y++ MKQ  D L LA  P+S S  +S VL GL++EY+ I+C I  K 
Subjt:  MSPAIAADVVSFKTPREVWKALEEVYGATSKARVNQMRGILQNTKKGATKMIKYMAVMKQAVDNLKLASNPVSLSDQISYVLAGLDSEYVPIVCSIEDKN

Query:  IKTWQELSSILINFEGTLARYSPITNVNVGELSDLSAYLVLNRTGNFSQQRQFSPNSGNRGNGNENGS-----GGKFQ
          +WQE+ + LI FE  L     + NV++ ++S  SA    N T N S  + ++P+   +G G    S     GG+FQ
Subjt:  IKTWQELSSILINFEGTLARYSPITNVNVGELSDLSAYLVLNRTGNFSQQRQFSPNSGNRGNGNENGS-----GGKFQ

XP_022143579.1 ankyrin repeat-containing protein NPR4-like [Momordica charantia]2.7e-3647.5Show/hide
Query:  ATAANPVAAT--TIISSFFGHPLSTVLTVKLDEKNYLLWRGMVLAIL--------------------------------------------RALSGWLFG
        +T  N   AT  + I+  FGHPLST LTVKLD+KNY LW+GMVLA+L                                            +A  GWLFG
Subjt:  ATAANPVAAT--TIISSFFGHPLSTVLTVKLDEKNYLLWRGMVLAIL--------------------------------------------RALSGWLFG

Query:  SMSPAIAADVVSFKTPREVWKALEEVYGATSKARVNQMRGILQNTKKGATKMIKYMAVMKQAVDNLKLASNPVSLSDQISYVLAGLDSEYVPIVCSIEDK
        SM+P+IAADVV+ +T  EVW ALE ++G+TSKAR+NQ+R  LQNTKKGA KM  Y+A MKQ  ++LKLA  PV+LS   S +L G ++EY+PI+C+IEDK
Subjt:  SMSPAIAADVVSFKTPREVWKALEEVYGATSKARVNQMRGILQNTKKGATKMIKYMAVMKQAVDNLKLASNPVSLSDQISYVLAGLDSEYVPIVCSIEDK

XP_022157748.1 uncharacterized protein LOC111024384 isoform X1 [Momordica charantia]8.3e-4641.92Show/hide
Query:  TTSCGEATVVGDDSSSSVAATAANPVAATTIISSFFGHPLSTVLTVKLDEKNYLLWRGMVLAILR-----------------------------------
        TT   E + V     ++VA    NP   +   ++ FGHPL TVLTVKLD+KNY LWRGMVLA+LR                                   
Subjt:  TTSCGEATVVGDDSSSSVAATAANPVAATTIISSFFGHPLSTVLTVKLDEKNYLLWRGMVLAILR-----------------------------------

Query:  ----------ALSGWLFGSMSPAIAADVVSFKTPREVWKALEEVYGATSKARVNQMRGILQNTKKGATKMIKYMAVMKQAVDNLKLASNPVSLSDQISYV
                  AL GWLFGSM+P+IA DVV F++ REVWKALE++YGATSKAR+NQ+R +LQNTKK + KM +Y+ +MKQA ++LKLA  PV+ +  +S V
Subjt:  ----------ALSGWLFGSMSPAIAADVVSFKTPREVWKALEEVYGATSKARVNQMRGILQNTKKGATKMIKYMAVMKQAVDNLKLASNPVSLSDQISYV

Query:  LAGLDSEYVPIVCSIEDKNIKTWQELSSILINFEGTLARYSPITNVNVGELSDLSAYLVLNRTGNFSQQRQFSPNSG-NRGNGNENGSGGK
        L+GL++EY+PIVC IE K+  +WQEL + L+ FE TL R + ++      +SD S   V ++  +   ++     SG  +G G+ N +  K
Subjt:  LAGLDSEYVPIVCSIEDKNIKTWQELSSILINFEGTLARYSPITNVNVGELSDLSAYLVLNRTGNFSQQRQFSPNSG-NRGNGNENGSGGK

XP_022157750.1 uncharacterized protein LOC111024384 isoform X2 [Momordica charantia]8.3e-4641.92Show/hide
Query:  TTSCGEATVVGDDSSSSVAATAANPVAATTIISSFFGHPLSTVLTVKLDEKNYLLWRGMVLAILR-----------------------------------
        TT   E + V     ++VA    NP   +   ++ FGHPL TVLTVKLD+KNY LWRGMVLA+LR                                   
Subjt:  TTSCGEATVVGDDSSSSVAATAANPVAATTIISSFFGHPLSTVLTVKLDEKNYLLWRGMVLAILR-----------------------------------

Query:  ----------ALSGWLFGSMSPAIAADVVSFKTPREVWKALEEVYGATSKARVNQMRGILQNTKKGATKMIKYMAVMKQAVDNLKLASNPVSLSDQISYV
                  AL GWLFGSM+P+IA DVV F++ REVWKALE++YGATSKAR+NQ+R +LQNTKK + KM +Y+ +MKQA ++LKLA  PV+ +  +S V
Subjt:  ----------ALSGWLFGSMSPAIAADVVSFKTPREVWKALEEVYGATSKARVNQMRGILQNTKKGATKMIKYMAVMKQAVDNLKLASNPVSLSDQISYV

Query:  LAGLDSEYVPIVCSIEDKNIKTWQELSSILINFEGTLARYSPITNVNVGELSDLSAYLVLNRTGNFSQQRQFSPNSG-NRGNGNENGSGGK
        L+GL++EY+PIVC IE K+  +WQEL + L+ FE TL R + ++      +SD S   V ++  +   ++     SG  +G G+ N +  K
Subjt:  LAGLDSEYVPIVCSIEDKNIKTWQELSSILINFEGTLARYSPITNVNVGELSDLSAYLVLNRTGNFSQQRQFSPNSG-NRGNGNENGSGGK

TrEMBL top hitse value%identityAlignment
A0A6J1CLV9 uncharacterized protein LOC1110128091.1e-2442.13Show/hide
Query:  MSPAIAADVVSFKTPREVWKALEEVYGATSKARVNQMRGILQNTKKGATKMIKYMAVMKQAVDNLKLASNPVSLSDQISYVLAGLDSEYVPIVCSIEDKN
        MSP IA DV+S  T R+VWKALE++Y   +KAR+NQ++  LQ T+K   KM  Y++ MKQ  D L LA  P+S S  +S VL GL++EY+ I+C I  K 
Subjt:  MSPAIAADVVSFKTPREVWKALEEVYGATSKARVNQMRGILQNTKKGATKMIKYMAVMKQAVDNLKLASNPVSLSDQISYVLAGLDSEYVPIVCSIEDKN

Query:  IKTWQELSSILINFEGTLARYSPITNVNVGELSDLSAYLVLNRTGNFSQQRQFSPNSGNRGNGNENGS-----GGKFQ
          +WQE+ + LI FE  L     + NV++ ++S  SA    N T N S  + ++P+   +G G    S     GG+FQ
Subjt:  IKTWQELSSILINFEGTLARYSPITNVNVGELSDLSAYLVLNRTGNFSQQRQFSPNSGNRGNGNENGS-----GGKFQ

A0A6J1CPQ7 ankyrin repeat-containing protein NPR4-like1.3e-3647.5Show/hide
Query:  ATAANPVAAT--TIISSFFGHPLSTVLTVKLDEKNYLLWRGMVLAIL--------------------------------------------RALSGWLFG
        +T  N   AT  + I+  FGHPLST LTVKLD+KNY LW+GMVLA+L                                            +A  GWLFG
Subjt:  ATAANPVAAT--TIISSFFGHPLSTVLTVKLDEKNYLLWRGMVLAIL--------------------------------------------RALSGWLFG

Query:  SMSPAIAADVVSFKTPREVWKALEEVYGATSKARVNQMRGILQNTKKGATKMIKYMAVMKQAVDNLKLASNPVSLSDQISYVLAGLDSEYVPIVCSIEDK
        SM+P+IAADVV+ +T  EVW ALE ++G+TSKAR+NQ+R  LQNTKKGA KM  Y+A MKQ  ++LKLA  PV+LS   S +L G ++EY+PI+C+IEDK
Subjt:  SMSPAIAADVVSFKTPREVWKALEEVYGATSKARVNQMRGILQNTKKGATKMIKYMAVMKQAVDNLKLASNPVSLSDQISYVLAGLDSEYVPIVCSIEDK

A0A6J1DTZ7 uncharacterized protein LOC111024384 isoform X24.0e-4641.92Show/hide
Query:  TTSCGEATVVGDDSSSSVAATAANPVAATTIISSFFGHPLSTVLTVKLDEKNYLLWRGMVLAILR-----------------------------------
        TT   E + V     ++VA    NP   +   ++ FGHPL TVLTVKLD+KNY LWRGMVLA+LR                                   
Subjt:  TTSCGEATVVGDDSSSSVAATAANPVAATTIISSFFGHPLSTVLTVKLDEKNYLLWRGMVLAILR-----------------------------------

Query:  ----------ALSGWLFGSMSPAIAADVVSFKTPREVWKALEEVYGATSKARVNQMRGILQNTKKGATKMIKYMAVMKQAVDNLKLASNPVSLSDQISYV
                  AL GWLFGSM+P+IA DVV F++ REVWKALE++YGATSKAR+NQ+R +LQNTKK + KM +Y+ +MKQA ++LKLA  PV+ +  +S V
Subjt:  ----------ALSGWLFGSMSPAIAADVVSFKTPREVWKALEEVYGATSKARVNQMRGILQNTKKGATKMIKYMAVMKQAVDNLKLASNPVSLSDQISYV

Query:  LAGLDSEYVPIVCSIEDKNIKTWQELSSILINFEGTLARYSPITNVNVGELSDLSAYLVLNRTGNFSQQRQFSPNSG-NRGNGNENGSGGK
        L+GL++EY+PIVC IE K+  +WQEL + L+ FE TL R + ++      +SD S   V ++  +   ++     SG  +G G+ N +  K
Subjt:  LAGLDSEYVPIVCSIEDKNIKTWQELSSILINFEGTLARYSPITNVNVGELSDLSAYLVLNRTGNFSQQRQFSPNSG-NRGNGNENGSGGK

A0A6J1DU77 uncharacterized protein LOC111024384 isoform X14.0e-4641.92Show/hide
Query:  TTSCGEATVVGDDSSSSVAATAANPVAATTIISSFFGHPLSTVLTVKLDEKNYLLWRGMVLAILR-----------------------------------
        TT   E + V     ++VA    NP   +   ++ FGHPL TVLTVKLD+KNY LWRGMVLA+LR                                   
Subjt:  TTSCGEATVVGDDSSSSVAATAANPVAATTIISSFFGHPLSTVLTVKLDEKNYLLWRGMVLAILR-----------------------------------

Query:  ----------ALSGWLFGSMSPAIAADVVSFKTPREVWKALEEVYGATSKARVNQMRGILQNTKKGATKMIKYMAVMKQAVDNLKLASNPVSLSDQISYV
                  AL GWLFGSM+P+IA DVV F++ REVWKALE++YGATSKAR+NQ+R +LQNTKK + KM +Y+ +MKQA ++LKLA  PV+ +  +S V
Subjt:  ----------ALSGWLFGSMSPAIAADVVSFKTPREVWKALEEVYGATSKARVNQMRGILQNTKKGATKMIKYMAVMKQAVDNLKLASNPVSLSDQISYV

Query:  LAGLDSEYVPIVCSIEDKNIKTWQELSSILINFEGTLARYSPITNVNVGELSDLSAYLVLNRTGNFSQQRQFSPNSG-NRGNGNENGSGGK
        L+GL++EY+PIVC IE K+  +WQEL + L+ FE TL R + ++      +SD S   V ++  +   ++     SG  +G G+ N +  K
Subjt:  LAGLDSEYVPIVCSIEDKNIKTWQELSSILINFEGTLARYSPITNVNVGELSDLSAYLVLNRTGNFSQQRQFSPNSG-NRGNGNENGSGGK

A0A803R2Q2 Uncharacterized protein6.3e-2330.1Show/hide
Query:  TSCGEATVVGDDSSSSVAATAANPVAATTIISSFFGHPLSTVLTVKLDEKNYLLWRGMVLAILRA-----------------------------------
        T+ G  T  G ++ ++   T     +  + IS+ F + LS   ++KLD  N+ LW+ MV  I+R                                    
Subjt:  TSCGEATVVGDDSSSSVAATAANPVAATTIISSFFGHPLSTVLTVKLDEKNYLLWRGMVLAILRA-----------------------------------

Query:  ------------LSGWLFGSMSPAIAADVVSFKTPREVWKALEEVYGATSKARVNQMRGILQNTKKGATKMIKYMAVMKQAVDNLKLASNPVSLSDQISY
                    L GWL+GSM+ AIA++V+  ++   +W ALEE+YGA S+A ++++R  +Q T+KG+  M +Y+ + +   D+L LA  P      +S 
Subjt:  ------------LSGWLFGSMSPAIAADVVSFKTPREVWKALEEVYGATSKARVNQMRGILQNTKKGATKMIKYMAVMKQAVDNLKLASNPVSLSDQISY

Query:  VLAGLDSEYVPIVCSIEDKNIKTWQELSSILINFEGTLARYSPITNVNVGELSDLSAYLVLNRTGNFSQQRQFSPNSGNRGNGNENGSG
        VL+GLD EY+ IV  IE +   +WQ+L S+L++F+G L R + I+          S+ LV N + NF+Q+   S  +G R  G+    G
Subjt:  VLAGLDSEYVPIVCSIEDKNIKTWQELSSILINFEGTLARYSPITNVNVGELSDLSAYLVLNRTGNFSQQRQFSPNSGNRGNGNENGSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAGAACTACCTCTTGTGGAGAGGCAACCGTCGTGGGAGACGATTCATCTTCATCTGTAGCAGCTACTGCTGCAAATCCTGTAGCAGCTACCACCATTATTAGCTC
CTTTTTTGGACACCCACTGAGCACAGTCCTCACTGTCAAGCTGGATGAGAAGAACTACCTCTTGTGGAGAGGTATGGTGTTGGCTATCTTACGAGCTCTTTCCGGATGGT
TATTTGGCTCAATGTCTCCAGCCATTGCTGCCGACGTGGTCAGCTTTAAAACCCCAAGAGAGGTATGGAAAGCTCTGGAAGAAGTTTATGGAGCTACAAGCAAGGCGAGA
GTGAATCAGATGCGTGGTATCCTCCAGAATACAAAGAAAGGTGCCACTAAGATGATCAAATATATGGCCGTGATGAAGCAAGCAGTAGACAACCTTAAACTTGCGAGTAA
CCCTGTATCTCTTAGTGATCAAATCTCATATGTTCTTGCTGGGCTTGATTCCGAATATGTTCCTATTGTGTGTTCTATTGAAGATAAAAATATCAAAACCTGGCAAGAAC
TTAGCTCTATTCTGATAAATTTTGAGGGTACTTTAGCAAGATATAGTCCGATTACAAATGTTAATGTAGGAGAATTGTCTGATTTATCTGCGTATCTTGTTTTAAATAGA
ACGGGTAATTTCAGTCAACAAAGGCAGTTTAGTCCTAATTCTGGAAATAGGGGTAATGGAAATGAAAATGGCTCTGGTGGAAAATTTCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAAGAACTACCTCTTGTGGAGAGGCAACCGTCGTGGGAGACGATTCATCTTCATCTGTAGCAGCTACTGCTGCAAATCCTGTAGCAGCTACCACCATTATTAGCTC
CTTTTTTGGACACCCACTGAGCACAGTCCTCACTGTCAAGCTGGATGAGAAGAACTACCTCTTGTGGAGAGGTATGGTGTTGGCTATCTTACGAGCTCTTTCCGGATGGT
TATTTGGCTCAATGTCTCCAGCCATTGCTGCCGACGTGGTCAGCTTTAAAACCCCAAGAGAGGTATGGAAAGCTCTGGAAGAAGTTTATGGAGCTACAAGCAAGGCGAGA
GTGAATCAGATGCGTGGTATCCTCCAGAATACAAAGAAAGGTGCCACTAAGATGATCAAATATATGGCCGTGATGAAGCAAGCAGTAGACAACCTTAAACTTGCGAGTAA
CCCTGTATCTCTTAGTGATCAAATCTCATATGTTCTTGCTGGGCTTGATTCCGAATATGTTCCTATTGTGTGTTCTATTGAAGATAAAAATATCAAAACCTGGCAAGAAC
TTAGCTCTATTCTGATAAATTTTGAGGGTACTTTAGCAAGATATAGTCCGATTACAAATGTTAATGTAGGAGAATTGTCTGATTTATCTGCGTATCTTGTTTTAAATAGA
ACGGGTAATTTCAGTCAACAAAGGCAGTTTAGTCCTAATTCTGGAAATAGGGGTAATGGAAATGAAAATGGCTCTGGTGGAAAATTTCAATAG
Protein sequenceShow/hide protein sequence
MRRTTSCGEATVVGDDSSSSVAATAANPVAATTIISSFFGHPLSTVLTVKLDEKNYLLWRGMVLAILRALSGWLFGSMSPAIAADVVSFKTPREVWKALEEVYGATSKAR
VNQMRGILQNTKKGATKMIKYMAVMKQAVDNLKLASNPVSLSDQISYVLAGLDSEYVPIVCSIEDKNIKTWQELSSILINFEGTLARYSPITNVNVGELSDLSAYLVLNR
TGNFSQQRQFSPNSGNRGNGNENGSGGKFQ