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Lag0009068 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0009068
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr9:34967474..34967854
RNA-Seq ExpressionLag0009068
SyntenyLag0009068
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_010675428.1 PREDICTED: uncharacterized protein LOC104891430 [Beta vulgaris subsp. vulgaris]1.2e-0535.19Show/hide
Query:  EMAEGWVAVKRTRMAVEMGLCPLVLETDSSRVASIFQDEVGDDFSDVGALVADLRKDVPGSSFFDCRFSRREGNEVAHQLACLAGRDEESMVWVEVVPQC
        ++AE + A    R A++MG   ++LE+DSS++ S  Q     + S  G +VAD+        FF C+  +R GN VAH+LA L+       VW+   P+ 
Subjt:  EMAEGWVAVKRTRMAVEMGLCPLVLETDSSRVASIFQDEVGDDFSDVGALVADLRKDVPGSSFFDCRFSRREGNEVAHQLACLAGRDEESMVWVEVVPQC

Query:  VEALILSD
        + A +LSD
Subjt:  VEALILSD

XP_018844085.1 uncharacterized protein LOC109008447 [Juglans regia]5.5e-0631.03Show/hide
Query:  VQRHVRSPEMAEGWVAVKRTRMAVEMGLCPLVLETDSSRVASIFQDEVGDDFSDVGALVADLRKDVPGSSFFDCRFSRREGNEVAHQLACLAGRDEESMV
        V++HV  P +AE W   K   +  E+ L  ++ E D++ V +    +V +D S +G ++ D+++   G   ++ RF  R+GN VAH LA  A    E  +
Subjt:  VQRHVRSPEMAEGWVAVKRTRMAVEMGLCPLVLETDSSRVASIFQDEVGDDFSDVGALVADLRKDVPGSSFFDCRFSRREGNEVAHQLACLAGRDEESMV

Query:  WVEVVPQCVEALILSD
        W+E  P  +   +L D
Subjt:  WVEVVPQCVEALILSD

XP_022140628.1 uncharacterized protein LOC111011237 [Momordica charantia]7.7e-0833.86Show/hide
Query:  MLSASLVQRHVRSPEMAEGWVAVKRTRMAVEMGLCPLVLETDSSRVASIFQDEVGDDFSDVGALVADLRKDVPGSSFFDCRFSRREGNEVAHQLACLAGR
        M SA+    +++S +MAE  VAV+  ++A ++G+ P++LETDSSR+ ++F  +  +D S+ G +V   +     S      F +REGN+ AH LA  A  
Subjt:  MLSASLVQRHVRSPEMAEGWVAVKRTRMAVEMGLCPLVLETDSSRVASIFQDEVGDDFSDVGALVADLRKDVPGSSFFDCRFSRREGNEVAHQLACLAGR

Query:  DEESMVWVEVVP----QCVEALILSDM
          E  +W+E  P     C+E   L ++
Subjt:  DEESMVWVEVVP----QCVEALILSDM

XP_042950144.1 uncharacterized protein LOC122282259 [Carya illinoinensis]3.2e-0627.87Show/hide
Query:  MLSASLVQRHVRSPEMAEGWVAVKRTRMAVEMGLCPLVLETDSSRVASIFQDEVGDDFSDVGALVADLRKDVPGSSFFDCRFSRREGNEVAHQLACLAGR
        +L+AS ++ ++  PE  E    ++  ++ ++ G+  LV+E+D   +  I Q E   D S +G L +++++ +       C+   R GN  AH+LA +A  
Subjt:  MLSASLVQRHVRSPEMAEGWVAVKRTRMAVEMGLCPLVLETDSSRVASIFQDEVGDDFSDVGALVADLRKDVPGSSFFDCRFSRREGNEVAHQLACLAGR

Query:  DEESMVWVEVVPQCVEALILSD
         ++ +VW E VP+ +  +I  D
Subjt:  DEESMVWVEVVPQCVEALILSD

XP_042965942.1 uncharacterized protein LOC122299620 [Carya illinoinensis]4.2e-0627.87Show/hide
Query:  MLSASLVQRHVRSPEMAEGWVAVKRTRMAVEMGLCPLVLETDSSRVASIFQDEVGDDFSDVGALVADLRKDVPGSSFFDCRFSRREGNEVAHQLACLAGR
        +L+AS ++ ++  PE  E    ++  ++ ++ G+  LV+E+D   +  I Q E   D S +G L +++++ +       C+   R GN  AH+LA +A  
Subjt:  MLSASLVQRHVRSPEMAEGWVAVKRTRMAVEMGLCPLVLETDSSRVASIFQDEVGDDFSDVGALVADLRKDVPGSSFFDCRFSRREGNEVAHQLACLAGR

Query:  DEESMVWVEVVPQCVEALILSD
         ++ +VW E VP+ +  +I  D
Subjt:  DEESMVWVEVVPQCVEALILSD

TrEMBL top hitse value%identityAlignment
A0A1R3JXX0 RNase H domain-containing protein1.7e-0534.26Show/hide
Query:  AEGWVAVKRTRMAVEMGLCPLVLETDSSRVASIFQDEVGDDFSDVGALVADLRKDVPGSSFFDCRFS--RREGNEVAHQLACLAGRDEESMVWVEVVPQC
        AE   A+K    A +MG   +VLE D+  +       +  DFS +G  +A+++  V  SSF  C FS   R+GN +AH LA L     E+ +W+E VP  
Subjt:  AEGWVAVKRTRMAVEMGLCPLVLETDSSRVASIFQDEVGDDFSDVGALVADLRKDVPGSSFFDCRFS--RREGNEVAHQLACLAGRDEESMVWVEVVPQC

Query:  VEALILSD
        + A++ ++
Subjt:  VEALILSD

A0A2I4GJL1 uncharacterized protein LOC1090084472.7e-0631.03Show/hide
Query:  VQRHVRSPEMAEGWVAVKRTRMAVEMGLCPLVLETDSSRVASIFQDEVGDDFSDVGALVADLRKDVPGSSFFDCRFSRREGNEVAHQLACLAGRDEESMV
        V++HV  P +AE W   K   +  E+ L  ++ E D++ V +    +V +D S +G ++ D+++   G   ++ RF  R+GN VAH LA  A    E  +
Subjt:  VQRHVRSPEMAEGWVAVKRTRMAVEMGLCPLVLETDSSRVASIFQDEVGDDFSDVGALVADLRKDVPGSSFFDCRFSRREGNEVAHQLACLAGRDEESMV

Query:  WVEVVPQCVEALILSD
        W+E  P  +   +L D
Subjt:  WVEVVPQCVEALILSD

A0A2N9GJZ4 RNase H domain-containing protein7.8e-0631.25Show/hide
Query:  MLSASLVQR--HVRSPEMAEGWVAVKRTRMAVEMGLCPLVLETDSSRVASIFQDEVGDDFSDVGALVADLRKDVPGSSFFDCRFSRREGNEVAHQLACLA
        ++ ASLVQ+     S  M E   A +    A+E+G   + LE DS ++      E    F+  G ++ D+R       +F  + ++REGN+ AH LA LA
Subjt:  MLSASLVQR--HVRSPEMAEGWVAVKRTRMAVEMGLCPLVLETDSSRVASIFQDEVGDDFSDVGALVADLRKDVPGSSFFDCRFSRREGNEVAHQLACLA

Query:  GRDEESMVWVEVVPQCVEALILSDMALL
           +++ VW+E VP  + A+   D  L+
Subjt:  GRDEESMVWVEVVPQCVEALILSDMALL

A0A6J1CIF1 uncharacterized protein LOC1110112373.7e-0833.86Show/hide
Query:  MLSASLVQRHVRSPEMAEGWVAVKRTRMAVEMGLCPLVLETDSSRVASIFQDEVGDDFSDVGALVADLRKDVPGSSFFDCRFSRREGNEVAHQLACLAGR
        M SA+    +++S +MAE  VAV+  ++A ++G+ P++LETDSSR+ ++F  +  +D S+ G +V   +     S      F +REGN+ AH LA  A  
Subjt:  MLSASLVQRHVRSPEMAEGWVAVKRTRMAVEMGLCPLVLETDSSRVASIFQDEVGDDFSDVGALVADLRKDVPGSSFFDCRFSRREGNEVAHQLACLAGR

Query:  DEESMVWVEVVP----QCVEALILSDM
          E  +W+E  P     C+E   L ++
Subjt:  DEESMVWVEVVP----QCVEALILSDM

A0A6P9DX22 uncharacterized protein LOC1089848671.0e-0532.52Show/hide
Query:  MLSASLVQRHVR-SPEMAEGWVAVKRTRMAVEMGLCPLVLETDSSRVASIFQDEVGDDFSDVGALVADLRKDVPGSSFFDCRFSRREGNEVAHQLACLAG
        +L+A    R  R SP +AE    ++   +  E+G   + LE D+  V      E  DD S  G ++ DL++ +  SS +   F+ REGNEVAH LA +A 
Subjt:  MLSASLVQRHVR-SPEMAEGWVAVKRTRMAVEMGLCPLVLETDSSRVASIFQDEVGDDFSDVGALVADLRKDVPGSSFFDCRFSRREGNEVAHQLACLAG

Query:  RDEESMVWVEVVPQCVEALILSD
               W+E  P+ ++ L+  D
Subjt:  RDEESMVWVEVVPQCVEALILSD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGTCGGCATCATTGGTGCAGCGGCATGTGCGAAGTCCGGAGATGGCTGAAGGATGGGTTGCGGTTAAGAGGACGAGAATGGCAGTGGAGATGGGTCTGTGCCCATT
GGTGTTGGAGACCGATTCCAGTCGGGTGGCTAGCATTTTCCAGGATGAGGTAGGGGATGACTTCTCGGATGTGGGTGCACTTGTGGCTGATTTACGAAAGGATGTACCAG
GTTCTTCCTTTTTCGACTGCAGGTTCTCTCGGAGAGAGGGGAATGAGGTGGCACACCAGTTGGCTTGTCTGGCAGGGAGGGACGAAGAATCTATGGTGTGGGTTGAGGTT
GTACCCCAGTGTGTTGAGGCTTTGATCCTTTCTGATATGGCATTGTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTGTCGGCATCATTGGTGCAGCGGCATGTGCGAAGTCCGGAGATGGCTGAAGGATGGGTTGCGGTTAAGAGGACGAGAATGGCAGTGGAGATGGGTCTGTGCCCATT
GGTGTTGGAGACCGATTCCAGTCGGGTGGCTAGCATTTTCCAGGATGAGGTAGGGGATGACTTCTCGGATGTGGGTGCACTTGTGGCTGATTTACGAAAGGATGTACCAG
GTTCTTCCTTTTTCGACTGCAGGTTCTCTCGGAGAGAGGGGAATGAGGTGGCACACCAGTTGGCTTGTCTGGCAGGGAGGGACGAAGAATCTATGGTGTGGGTTGAGGTT
GTACCCCAGTGTGTTGAGGCTTTGATCCTTTCTGATATGGCATTGTTGTGA
Protein sequenceShow/hide protein sequence
MLSASLVQRHVRSPEMAEGWVAVKRTRMAVEMGLCPLVLETDSSRVASIFQDEVGDDFSDVGALVADLRKDVPGSSFFDCRFSRREGNEVAHQLACLAGRDEESMVWVEV
VPQCVEALILSDMALL