; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0009080 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0009080
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptiontranscription factor RBF1-like
Genome locationchr9:35144042..35145760
RNA-Seq ExpressionLag0009080
SyntenyLag0009080
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
DAD22363.1 TPA_asm: hypothetical protein HUJ06_023826 [Nelumbo nucifera]2.1e-2355.08Show/hide
Query:  MSIATDQLQPPPTPA-----SSHVGHDGSVGPVIVVLAVIAILGAMAGMIGRLFSGRRLFGHGQYDVEGLVEKKCSSCLDGKVDGIPPPRPPFSAATGGD
        MS+  +Q QPPP        SSH  H GSVGP+I VLAVI ILG +AGMIGRL SGR + GHGQYD EG VE+KCSSC+DG++D  PPP PP +   G  
Subjt:  MSIATDQLQPPPTPA-----SSHVGHDGSVGPVIVVLAVIAILGAMAGMIGRLFSGRRLFGHGQYDVEGLVEKKCSSCLDGKVDGIPPPRPPFSAATGGD

Query:  VPVAMPILPEIKEEQGPK
        +P+A+P+    + EQ P+
Subjt:  VPVAMPILPEIKEEQGPK

KAF3435358.1 hypothetical protein FNV43_RR22447 [Rhamnella rubrinervis]1.2e-2352.41Show/hide
Query:  MSIATDQLQPPPTPA-----SSHVGHDGSVGPVIVVLAVIAILGAMAGMIGRLFSGRRLFGHGQYDVEGLVEKKCSSCLDGKVDGIPPPRP-PFSAATGG
        MS      QPPP        ++H GH GSVGPVI VLAVI ILG +AGMIGRL SGR + GHGQYD EG VEKKCS+CLDG+VD  PPPRP P    +G 
Subjt:  MSIATDQLQPPPTPA-----SSHVGHDGSVGPVIVVLAVIAILGAMAGMIGRLFSGRRLFGHGQYDVEGLVEKKCSSCLDGKVDGIPPPRP-PFSAATGG

Query:  DVPVAMPI--LPEIKEEQGPKEAHSRFQHIGREETSRKKQREKEQ
        +VPVAMP+    EIKEE+   + H +  H  +++  +++Q++++Q
Subjt:  DVPVAMPI--LPEIKEEQGPKEAHSRFQHIGREETSRKKQREKEQ

KAG7035125.1 hypothetical protein SDJN02_01920, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-3473.87Show/hide
Query:  MSIATDQLQPPPTPASSHVGHDGSVGPVIVVLAVIAILGAMAGMIGRLFSGRRLFGHGQYDVEGLVEKKCSSCLDGKVDGIPPPRPPFSAATGGDVPVAM
        MSIAT ++ P    ASSHVG DG  GPVI VL V+ ILG +AGMIGRLFSGRRL G GQYDVEG VEKKCSSC DGKVD +PP  PP SA  GGDVP+AM
Subjt:  MSIATDQLQPPPTPASSHVGHDGSVGPVIVVLAVIAILGAMAGMIGRLFSGRRLFGHGQYDVEGLVEKKCSSCLDGKVDGIPPPRPPFSAATGGDVPVAM

Query:  PILPEIKEEQG
        PILPEIKEEQG
Subjt:  PILPEIKEEQG

XP_015874226.1 transcription factor RBF1-like [Ziziphus jujuba]9.5e-2450.68Show/hide
Query:  MSIATDQLQPPPTPA-----SSHVGHDGSVGPVIVVLAVIAILGAMAGMIGRLFSGRRLFGHGQYDVEGLVEKKCSSCLDGKVDGIPPPRPPFSAATGGD
        MS      +PPP        ++H GH GSVGPVI VLAVI ILG +AGMIGRL SGR + GHGQYD E  VE+KCS+CLDG+VD  PPP  P +  +GG+
Subjt:  MSIATDQLQPPPTPA-----SSHVGHDGSVGPVIVVLAVIAILGAMAGMIGRLFSGRRLFGHGQYDVEGLVEKKCSSCLDGKVDGIPPPRPPFSAATGGD

Query:  VPVAMP--ILPEIKEE---------QGPKEAHSRFQHIGREETSRKKQ
        VPVAMP  I  EIKEE         Q P++   R QH    + +   Q
Subjt:  VPVAMP--ILPEIKEE---------QGPKEAHSRFQHIGREETSRKKQ

XP_023533131.1 uncharacterized protein LOC111795113 [Cucurbita pepo subsp. pepo]2.7e-3474.77Show/hide
Query:  MSIATDQLQPPPTPASSHVGHDGSVGPVIVVLAVIAILGAMAGMIGRLFSGRRLFGHGQYDVEGLVEKKCSSCLDGKVDGIPPPRPPFSAATGGDVPVAM
        MSIAT +  P    ASSHVG D   GPVI VL VI ILG +AG+IGRLFSGRR+ G GQYDVEG VEKKCSSCLDGKVD +PP RPP SA  GGDVPVAM
Subjt:  MSIATDQLQPPPTPASSHVGHDGSVGPVIVVLAVIAILGAMAGMIGRLFSGRRLFGHGQYDVEGLVEKKCSSCLDGKVDGIPPPRPPFSAATGGDVPVAM

Query:  PILPEIKEEQG
        PILPEIKEEQG
Subjt:  PILPEIKEEQG

TrEMBL top hitse value%identityAlignment
A0A067KPY1 Uncharacterized protein3.0e-2353.62Show/hide
Query:  MSIATDQLQPPPTPA-----SSHVGHDGSVGPVIVVLAVIAILGAMAGMIGRLFSGRRLFGHGQYDVEGLVEKKCSSCLDGKVDGIPPPRPPFSAATGGD
        MS   DQ QPPP        ++H GH GSVGP I VLAVI ILG +AGM+GRL SGRR+ GHGQYD EG VE+KCSSCLDG+VD  PPP PP       D
Subjt:  MSIATDQLQPPPTPA-----SSHVGHDGSVGPVIVVLAVIAILGAMAGMIGRLFSGRRLFGHGQYDVEGLVEKKCSSCLDGKVDGIPPPRPPFSAATGGD

Query:  VPVAMPILPEIKEEQGPKEAHSRFQHIGREETSRKKQR
        +PVA P+     EE GP+E       I  EE  + K +
Subjt:  VPVAMPILPEIKEEQGPKEAHSRFQHIGREETSRKKQR

A0A2N9FA50 Uncharacterized protein4.3e-2260.91Show/hide
Query:  DQLQPPPTPA-----SSHVGHDGSVGPVIVVLAVIAILGAMAGMIGRLFSGRRLFGHGQYDVEGLVEKKCSSCLDGKVDGIPPPRPPFSAATGGDVPVAM
        +Q QPPP P      ++H GH GSVGPVI VLAVI ILG +AGMIGRL SGRR+ GHGQYD E  VE KCSSCLDG+VD  PPPR P   ++   +PV  
Subjt:  DQLQPPPTPA-----SSHVGHDGSVGPVIVVLAVIAILGAMAGMIGRLFSGRRLFGHGQYDVEGLVEKKCSSCLDGKVDGIPPPRPPFSAATGGDVPVAM

Query:  PILPEIKEEQ
        P   EIKEE+
Subjt:  PILPEIKEEQ

A0A5N6QPA2 Uncharacterized protein3.0e-2360.98Show/hide
Query:  MSIATDQLQPPPTPA-----SSHVGHDGSVGPVIVVLAVIAILGAMAGMIGRLFSGRRLFGHGQYDVEGLVEKKCSSCLDGKVDGIPPPRPPFSAATGGD
        MS   DQ QPPP        ++H GH GSVGPVI VLAVI ILG +AGMIGRL SGRR+ GHGQYD E  VE+KCSSCLDG+VD  PPPR P   A+   
Subjt:  MSIATDQLQPPPTPA-----SSHVGHDGSVGPVIVVLAVIAILGAMAGMIGRLFSGRRLFGHGQYDVEGLVEKKCSSCLDGKVDGIPPPRPPFSAATGGD

Query:  VPVAMPI--LPEIKEEQGPKEAH
        VPVA P+    EIKEE+   EAH
Subjt:  VPVAMPI--LPEIKEEQGPKEAH

A0A6P3Z8L2 transcription factor RBF1-like4.6e-2450.68Show/hide
Query:  MSIATDQLQPPPTPA-----SSHVGHDGSVGPVIVVLAVIAILGAMAGMIGRLFSGRRLFGHGQYDVEGLVEKKCSSCLDGKVDGIPPPRPPFSAATGGD
        MS      +PPP        ++H GH GSVGPVI VLAVI ILG +AGMIGRL SGR + GHGQYD E  VE+KCS+CLDG+VD  PPP  P +  +GG+
Subjt:  MSIATDQLQPPPTPA-----SSHVGHDGSVGPVIVVLAVIAILGAMAGMIGRLFSGRRLFGHGQYDVEGLVEKKCSSCLDGKVDGIPPPRPPFSAATGGD

Query:  VPVAMP--ILPEIKEE---------QGPKEAHSRFQHIGREETSRKKQ
        VPVAMP  I  EIKEE         Q P++   R QH    + +   Q
Subjt:  VPVAMP--ILPEIKEE---------QGPKEAHSRFQHIGREETSRKKQ

A0A7N2MYN3 Uncharacterized protein3.3e-2255.04Show/hide
Query:  QLQPPPTPAS-------SHVGHDGSVGPVIVVLAVIAILGAMAGMIGRLFSGRRLFGHGQYDVEGLVEKKCSSCLDGKVDGIPPPRPPFSAATGGDVPVA
        Q  PPP+P +       +H GH GSVGPVI VLAVI ILG +AGMIGRL SGRR+ GHGQYD E  VE KCSSCLDG+VD  PPPR P    +   +PV 
Subjt:  QLQPPPTPAS-------SHVGHDGSVGPVIVVLAVIAILGAMAGMIGRLFSGRRLFGHGQYDVEGLVEKKCSSCLDGKVDGIPPPRPPFSAATGGDVPVA

Query:  MPILPEIKEEQG-------PKEAHSRFQH
         P   EIKEE+         +EAH   QH
Subjt:  MPILPEIKEEQG-------PKEAHSRFQH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G26520.1 unknown protein3.4e-1138.38Show/hide
Query:  QPPP----TPASSHVGHDG--SVGPVIVVLAVIAILGAMAGMIGRLFSGRRLFGHGQYDVEGLVEKKCSSCLDGKV-------DGIPPPRPPFSAATGG
        QPPP    +  SS V   G  ++GP I V  V+ +L  +A +IGRL SG+ + G+G YD+E   E +C SC+DG +          PPPR P    + G
Subjt:  QPPP----TPASSHVGHDG--SVGPVIVVLAVIAILGAMAGMIGRLFSGRRLFGHGQYDVEGLVEKKCSSCLDGKV-------DGIPPPRPPFSAATGG

AT3G57500.1 unknown protein1.8e-1240Show/hide
Query:  TDQLQPPPTPASSHVGHDGSVGPVIVVLAVIAILGAMAGMIGRLFSGRRLFGHGQYDVEGLVEKKCSSCLDGKVDGI-----PPPRPPFSAATGGDVPVA
        T  + PP     SH     S+  ++VVLAVI IL  +AG+  RL  GR L   G +D+EG VE+KC SC+D  +  +     PPP PP + A     P A
Subjt:  TDQLQPPPTPASSHVGHDGSVGPVIVVLAVIAILGAMAGMIGRLFSGRRLFGHGQYDVEGLVEKKCSSCLDGKVDGI-----PPPRPPFSAATGGDVPVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCATTGCCACAGACCAACTACAGCCACCCCCCACCCCCGCCTCGAGCCATGTTGGTCACGATGGGTCGGTCGGGCCCGTCATTGTAGTTCTTGCAGTGATCGCCAT
CCTCGGTGCCATGGCCGGTATGATTGGGAGATTGTTCTCGGGTCGTCGTTTATTTGGCCATGGCCAGTATGATGTTGAAGGATTGGTTGAGAAGAAATGCTCGTCTTGTT
TGGATGGGAAGGTCGACGGCATTCCACCACCGAGGCCTCCATTTTCAGCCGCCACCGGAGGTGATGTTCCGGTGGCAATGCCGATCCTGCCGGAGATAAAAGAAGAACAA
GGACCTAAAGAGGCTCATTCACGATTTCAACACATAGGGAGAGAGGAAACCAGCCGCAAGAAACAGAGAGAGAAAGAACAAGCGCCGTCAGTCACGAAGTCGTCGTTCAG
CATCGTCAAGCTTCGATTTTCGTATAGGGATAAGACTTGGGTGCCTTATCCTGGTGACACTATGGATACGACCCACTTTGTATTTGATACAAACGTCGCGATCCAACGCG
TTCGTGTAGGAGACATGCGAGTGGGAATATCCTATGCAATGAGTTTGCATAAGACCGGATTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCATTGCCACAGACCAACTACAGCCACCCCCCACCCCCGCCTCGAGCCATGTTGGTCACGATGGGTCGGTCGGGCCCGTCATTGTAGTTCTTGCAGTGATCGCCAT
CCTCGGTGCCATGGCCGGTATGATTGGGAGATTGTTCTCGGGTCGTCGTTTATTTGGCCATGGCCAGTATGATGTTGAAGGATTGGTTGAGAAGAAATGCTCGTCTTGTT
TGGATGGGAAGGTCGACGGCATTCCACCACCGAGGCCTCCATTTTCAGCCGCCACCGGAGGTGATGTTCCGGTGGCAATGCCGATCCTGCCGGAGATAAAAGAAGAACAA
GGACCTAAAGAGGCTCATTCACGATTTCAACACATAGGGAGAGAGGAAACCAGCCGCAAGAAACAGAGAGAGAAAGAACAAGCGCCGTCAGTCACGAAGTCGTCGTTCAG
CATCGTCAAGCTTCGATTTTCGTATAGGGATAAGACTTGGGTGCCTTATCCTGGTGACACTATGGATACGACCCACTTTGTATTTGATACAAACGTCGCGATCCAACGCG
TTCGTGTAGGAGACATGCGAGTGGGAATATCCTATGCAATGAGTTTGCATAAGACCGGATTGTGA
Protein sequenceShow/hide protein sequence
MSIATDQLQPPPTPASSHVGHDGSVGPVIVVLAVIAILGAMAGMIGRLFSGRRLFGHGQYDVEGLVEKKCSSCLDGKVDGIPPPRPPFSAATGGDVPVAMPILPEIKEEQ
GPKEAHSRFQHIGREETSRKKQREKEQAPSVTKSSFSIVKLRFSYRDKTWVPYPGDTMDTTHFVFDTNVAIQRVRVGDMRVGISYAMSLHKTGL