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Lag0009114 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0009114
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr9:35571434..35572105
RNA-Seq ExpressionLag0009114
SyntenyLag0009114
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035613.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]5.9e-1137.4Show/hide
Query:  MPITQLDAAISSGSQTEAIVQ-PDVVADTSIQNNVDINDDISSCDQA---------NLQSLRRSSRNRHPPGFLQDYHCNLLVHQSRSIHDKFPYALQGF
        +PI  LD  I++ +  E I++ P+  +   IQ   D  +     + A         NL   R+S+R   P  FL+DYHC+LL H S        + L   
Subjt:  MPITQLDAAISSGSQTEAIVQ-PDVVADTSIQNNVDINDDISSCDQA---------NLQSLRRSSRNRHPPGFLQDYHCNLLVHQSRSIHDKFPYALQGF

Query:  LSYDKLNPSYRHFILNISTTFEPSFYHQAIK
        LSY+KLNP++R F+ N+ST +EPSF+HQA+K
Subjt:  LSYDKLNPSYRHFILNISTTFEPSFYHQAIK

KAA0057703.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.2e-1138.17Show/hide
Query:  MPITQLDAAISSGSQTEAIVQ-PDVVADTSIQ-----NNVDINDDISSCDQ----ANLQSLRRSSRNRHPPGFLQDYHCNLLVHQSRSIHDKFPYALQGF
        +PI  L+  I++ + TEAI++ P+  +   IQ      NVD   + ++ +      NL   R+S+R   PP  L+DYHC+LL H S        + L   
Subjt:  MPITQLDAAISSGSQTEAIVQ-PDVVADTSIQ-----NNVDINDDISSCDQ----ANLQSLRRSSRNRHPPGFLQDYHCNLLVHQSRSIHDKFPYALQGF

Query:  LSYDKLNPSYRHFILNISTTFEPSFYHQAIK
        LSY+KLNP++R F+ N+ST +E SF+HQA+K
Subjt:  LSYDKLNPSYRHFILNISTTFEPSFYHQAIK

KAA0063422.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]5.9e-1135.11Show/hide
Query:  MPITQLDAAISSGSQTEAIVQ-PDVVADTSIQNNVDINDDISSCDQANLQSLR---------RSSRNRHPPGFLQDYHCNLLVHQSRSIHDKFPYALQGF
        +P+  LD  I++ +  + I++ P+  +   IQ   D  +  S+ + AN +            +S+R   PP FL+DYHC+LL H S        + L   
Subjt:  MPITQLDAAISSGSQTEAIVQ-PDVVADTSIQNNVDINDDISSCDQANLQSLR---------RSSRNRHPPGFLQDYHCNLLVHQSRSIHDKFPYALQGF

Query:  LSYDKLNPSYRHFILNISTTFEPSFYHQAIK
        LSY+KLNP++R F+ N+ST +EP F+HQA+K
Subjt:  LSYDKLNPSYRHFILNISTTFEPSFYHQAIK

KYP40999.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]2.0e-1140.22Show/hide
Query:  QNNVDINDDISSCDQANLQSLRRSSRNRHPPGFLQDYHCNLLVHQSRSIHD-KFPYALQGFLSYDKLNPSYRHFILNISTTFEPSFYHQAIK
        Q ++ +  + +   Q NL   R S+R RHPP +L+DYHCN++ H +   H    P++L  FLSY++L+PSY+ F+L+++++ EP  Y+QAI+
Subjt:  QNNVDINDDISSCDQANLQSLRRSSRNRHPPGFLQDYHCNLLVHQSRSIHD-KFPYALQGFLSYDKLNPSYRHFILNISTTFEPSFYHQAIK

XP_022154919.1 uncharacterized protein LOC111022065 [Momordica charantia]3.5e-1129.57Show/hide
Query:  EDVFPFHSVFDEHPVDDMFSEFVLPCPASGFVPSNTDCLSVANCDSHPSGGSIGVNSCIAGDNTGLHPSGNTDD-------TDVDAIVSPLL-GNAGGIS
        E +FPFH+V    P+ D F   V+P           D  S A  D H    +    S ++  +  + P+    D        + DA  SP+L  N   I 
Subjt:  EDVFPFHSVFDEHPVDDMFSEFVLPCPASGFVPSNTDCLSVANCDSHPSGGSIGVNSCIAGDNTGLHPSGNTDD-------TDVDAIVSPLL-GNAGGIS

Query:  TDSMTDMPITQLDAAISSGSQTEAIVQPDVVADTSIQNNVDINDDISSCDQANLQSLRRSSRNRHPPGFLQDYHCNLLVHQSRSIHDKFPYALQGFLSYD
         + + +  I  LD  ++                     NVD    +   D ++  +LRRSSR    P +L+DYHC L+     S    F Y LQ +L Y+
Subjt:  TDSMTDMPITQLDAAISSGSQTEAIVQPDVVADTSIQNNVDINDDISSCDQANLQSLRRSSRNRHPPGFLQDYHCNLLVHQSRSIHDKFPYALQGFLSYD

Query:  KLNPSYRHFILNISTTFEPSFYHQAIKFPH
         L+ SY+ F+L++S  +EP FYHQA+ F H
Subjt:  KLNPSYRHFILNISTTFEPSFYHQAIKFPH

TrEMBL top hitse value%identityAlignment
A0A151RET9 Retrovirus-related Pol polyprotein from transposon TNT 1-949.9e-1240.22Show/hide
Query:  QNNVDINDDISSCDQANLQSLRRSSRNRHPPGFLQDYHCNLLVHQSRSIHD-KFPYALQGFLSYDKLNPSYRHFILNISTTFEPSFYHQAIK
        Q ++ +  + +   Q NL   R S+R RHPP +L+DYHCN++ H +   H    P++L  FLSY++L+PSY+ F+L+++++ EP  Y+QAI+
Subjt:  QNNVDINDDISSCDQANLQSLRRSSRNRHPPGFLQDYHCNLLVHQSRSIHD-KFPYALQGFLSYDKLNPSYRHFILNISTTFEPSFYHQAIK

A0A5A7V587 Retrovirus-related Pol polyprotein from transposon TNT 1-942.9e-1135.11Show/hide
Query:  MPITQLDAAISSGSQTEAIVQ-PDVVADTSIQNNVDINDDISSCDQANLQSLR---------RSSRNRHPPGFLQDYHCNLLVHQSRSIHDKFPYALQGF
        +P+  LD  I++ +  + I++ P+  +   IQ   D  +  S+ + AN +            +S+R   PP FL+DYHC+LL H S        + L   
Subjt:  MPITQLDAAISSGSQTEAIVQ-PDVVADTSIQNNVDINDDISSCDQANLQSLR---------RSSRNRHPPGFLQDYHCNLLVHQSRSIHDKFPYALQGF

Query:  LSYDKLNPSYRHFILNISTTFEPSFYHQAIK
        LSY+KLNP++R F+ N+ST +EP F+HQA+K
Subjt:  LSYDKLNPSYRHFILNISTTFEPSFYHQAIK

A0A5D3DVP4 Putative mitochondrial protein5.8e-1238.17Show/hide
Query:  MPITQLDAAISSGSQTEAIVQ-PDVVADTSIQ-----NNVDINDDISSCDQ----ANLQSLRRSSRNRHPPGFLQDYHCNLLVHQSRSIHDKFPYALQGF
        +PI  L+  I++ + TEAI++ P+  +   IQ      NVD   + ++ +      NL   R+S+R   PP  L+DYHC+LL H S        + L   
Subjt:  MPITQLDAAISSGSQTEAIVQ-PDVVADTSIQ-----NNVDINDDISSCDQ----ANLQSLRRSSRNRHPPGFLQDYHCNLLVHQSRSIHDKFPYALQGF

Query:  LSYDKLNPSYRHFILNISTTFEPSFYHQAIK
        LSY+KLNP++R F+ N+ST +E SF+HQA+K
Subjt:  LSYDKLNPSYRHFILNISTTFEPSFYHQAIK

A0A5D3E4Z5 Retrovirus-related Pol polyprotein from transposon TNT 1-942.9e-1137.4Show/hide
Query:  MPITQLDAAISSGSQTEAIVQ-PDVVADTSIQNNVDINDDISSCDQA---------NLQSLRRSSRNRHPPGFLQDYHCNLLVHQSRSIHDKFPYALQGF
        +PI  LD  I++ +  E I++ P+  +   IQ   D  +     + A         NL   R+S+R   P  FL+DYHC+LL H S        + L   
Subjt:  MPITQLDAAISSGSQTEAIVQ-PDVVADTSIQNNVDINDDISSCDQA---------NLQSLRRSSRNRHPPGFLQDYHCNLLVHQSRSIHDKFPYALQGF

Query:  LSYDKLNPSYRHFILNISTTFEPSFYHQAIK
        LSY+KLNP++R F+ N+ST +EPSF+HQA+K
Subjt:  LSYDKLNPSYRHFILNISTTFEPSFYHQAIK

A0A6J1DNP7 uncharacterized protein LOC1110220651.7e-1129.57Show/hide
Query:  EDVFPFHSVFDEHPVDDMFSEFVLPCPASGFVPSNTDCLSVANCDSHPSGGSIGVNSCIAGDNTGLHPSGNTDD-------TDVDAIVSPLL-GNAGGIS
        E +FPFH+V    P+ D F   V+P           D  S A  D H    +    S ++  +  + P+    D        + DA  SP+L  N   I 
Subjt:  EDVFPFHSVFDEHPVDDMFSEFVLPCPASGFVPSNTDCLSVANCDSHPSGGSIGVNSCIAGDNTGLHPSGNTDD-------TDVDAIVSPLL-GNAGGIS

Query:  TDSMTDMPITQLDAAISSGSQTEAIVQPDVVADTSIQNNVDINDDISSCDQANLQSLRRSSRNRHPPGFLQDYHCNLLVHQSRSIHDKFPYALQGFLSYD
         + + +  I  LD  ++                     NVD    +   D ++  +LRRSSR    P +L+DYHC L+     S    F Y LQ +L Y+
Subjt:  TDSMTDMPITQLDAAISSGSQTEAIVQPDVVADTSIQNNVDINDDISSCDQANLQSLRRSSRNRHPPGFLQDYHCNLLVHQSRSIHDKFPYALQGFLSYD

Query:  KLNPSYRHFILNISTTFEPSFYHQAIKFPH
         L+ SY+ F+L++S  +EP FYHQA+ F H
Subjt:  KLNPSYRHFILNISTTFEPSFYHQAIKFPH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 87.2e-0734Show/hide
Query:  DVVADTSIQNNVDINDDISSCDQANLQSLRRSSRNRHPPGFLQDYHCNLLVHQSRSIHDKFPYALQGFLSYDKLNPSYRHFILNISTTFEPSFYHQAIKF
        D  A TS  +++DI    +  +     S+  S R    P +LQDY+C+ +   S +IHD     +  FLSY+K++P Y  F++ I+   EPS Y++A +F
Subjt:  DVVADTSIQNNVDINDDISSCDQANLQSLRRSSRNRHPPGFLQDYHCNLLVHQSRSIHDKFPYALQGFLSYDKLNPSYRHFILNISTTFEPSFYHQAIKF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGATGTTTTTCCCTTCCATAGTGTTTTTGATGAACATCCTGTTGATGATATGTTTTCTGAGTTTGTATTACCGTGTCCAGCATCAGGTTTTGTACCTTCTAACAC
TGATTGCTTGTCTGTTGCTAATTGTGATTCACATCCATCTGGTGGTTCTATTGGTGTTAATTCTTGTATTGCTGGTGATAATACTGGCTTGCATCCATCTGGGAATACTG
ATGATACTGATGTTGATGCCATTGTTTCCCCTTTGCTTGGTAATGCTGGTGGCATTAGTACTGATTCCATGACTGATATGCCTATTACACAACTTGATGCTGCTATTTCT
TCTGGCAGTCAAACAGAAGCAATTGTGCAACCTGATGTTGTTGCTGATACCTCTATTCAAAATAATGTTGATATTAATGACGATATTTCATCTTGTGATCAGGCCAATTT
ACAATCTCTTAGACGTTCGTCACGGAATCGTCATCCCCCAGGCTTCCTACAGGACTACCACTGCAATCTCTTGGTTCATCAATCAAGAAGTATCCATGATAAGTTTCCGT
ATGCTTTACAAGGTTTCTTATCTTACGATAAACTCAATCCTTCTTACAGGCATTTTATACTCAACATTTCAACAACATTCGAGCCATCTTTTTATCACCAAGCTATCAAG
TTTCCCCACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGATGTTTTTCCCTTCCATAGTGTTTTTGATGAACATCCTGTTGATGATATGTTTTCTGAGTTTGTATTACCGTGTCCAGCATCAGGTTTTGTACCTTCTAACAC
TGATTGCTTGTCTGTTGCTAATTGTGATTCACATCCATCTGGTGGTTCTATTGGTGTTAATTCTTGTATTGCTGGTGATAATACTGGCTTGCATCCATCTGGGAATACTG
ATGATACTGATGTTGATGCCATTGTTTCCCCTTTGCTTGGTAATGCTGGTGGCATTAGTACTGATTCCATGACTGATATGCCTATTACACAACTTGATGCTGCTATTTCT
TCTGGCAGTCAAACAGAAGCAATTGTGCAACCTGATGTTGTTGCTGATACCTCTATTCAAAATAATGTTGATATTAATGACGATATTTCATCTTGTGATCAGGCCAATTT
ACAATCTCTTAGACGTTCGTCACGGAATCGTCATCCCCCAGGCTTCCTACAGGACTACCACTGCAATCTCTTGGTTCATCAATCAAGAAGTATCCATGATAAGTTTCCGT
ATGCTTTACAAGGTTTCTTATCTTACGATAAACTCAATCCTTCTTACAGGCATTTTATACTCAACATTTCAACAACATTCGAGCCATCTTTTTATCACCAAGCTATCAAG
TTTCCCCACTAG
Protein sequenceShow/hide protein sequence
MEDVFPFHSVFDEHPVDDMFSEFVLPCPASGFVPSNTDCLSVANCDSHPSGGSIGVNSCIAGDNTGLHPSGNTDDTDVDAIVSPLLGNAGGISTDSMTDMPITQLDAAIS
SGSQTEAIVQPDVVADTSIQNNVDINDDISSCDQANLQSLRRSSRNRHPPGFLQDYHCNLLVHQSRSIHDKFPYALQGFLSYDKLNPSYRHFILNISTTFEPSFYHQAIK
FPH