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Lag0009130 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0009130
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionU-box domain-containing protein 62-like
Genome locationchr9:35758780..35759617
RNA-Seq ExpressionLag0009130
SyntenyLag0009130
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599942.1 U-box domain-containing protein 62, partial [Cucurbita argyrosperma subsp. sororia]8.5e-4576.76Show/hide
Query:  MDDKLFPVDRDRFFAHQGGDFRRSVFGDDRNW----SARNGSGKGSDE--DDDEDDDDEDEVDDGEDDVERLVSLDDVSKCSKTANPNSSNNDKSDSSGG
        MDDKLFP +RDRFFAHQGGDFR+S+F D RNW    S R GSGKGSDE  +DD+DDDDEDEVDD + DVE LVSLDDV+K  KT NPNSSNN++SD SGG
Subjt:  MDDKLFPVDRDRFFAHQGGDFRRSVFGDDRNW----SARNGSGKGSDE--DDDEDDDDEDEVDDGEDDVERLVSLDDVSKCSKTANPNSSNNDKSDSSGG

Query:  GLKNGTNKFGNGKPKHHSSFGGTLLVKDGMVGPSGSNTGANQ
        GLKNGTNK GNGKPK HSSFGGTLLVKDGM  PSGSNTG  Q
Subjt:  GLKNGTNKFGNGKPKHHSSFGGTLLVKDGMVGPSGSNTGANQ

XP_022146864.1 U-box domain-containing protein 62 isoform X1 [Momordica charantia]7.4e-4979.58Show/hide
Query:  MDDKLFPVDRDRFFAHQGGDFRRSVFGDDRNW----SARNGSGKGSDE--DDDEDDDDEDEVDDGEDDVERLVSLDDVSKCSKTANPNSSNNDKSDSSGG
        MDDKLFPVDRDRFFAHQG DFRRSVF D RNW    SAR+GSGKGS+E  DDD+DDD+E+EVDDG+DDVE LVS+DDV+KC+K ANPNSSN+D++D S G
Subjt:  MDDKLFPVDRDRFFAHQGGDFRRSVFGDDRNW----SARNGSGKGSDE--DDDEDDDDEDEVDDGEDDVERLVSLDDVSKCSKTANPNSSNNDKSDSSGG

Query:  GLKNGTNKFGNGKPKHHSSFGGTLLVKDGMVGPSGSNTGANQ
        GLKNGTNK GNGKPKHHSSFGGTLLVKDGMVGPS SN GA Q
Subjt:  GLKNGTNKFGNGKPKHHSSFGGTLLVKDGMVGPSGSNTGANQ

XP_022146865.1 U-box domain-containing protein 62 isoform X2 [Momordica charantia]4.3e-4980.71Show/hide
Query:  MDDKLFPVDRDRFFAHQGGDFRRSVFGDDRNW--SARNGSGKGSDE--DDDEDDDDEDEVDDGEDDVERLVSLDDVSKCSKTANPNSSNNDKSDSSGGGL
        MDDKLFPVDRDRFFAHQG DFRRSVF D RNW  SAR+GSGKGS+E  DDD+DDD+E+EVDDG+DDVE LVS+DDV+KC+K ANPNSSN+D++D S GGL
Subjt:  MDDKLFPVDRDRFFAHQGGDFRRSVFGDDRNW--SARNGSGKGSDE--DDDEDDDDEDEVDDGEDDVERLVSLDDVSKCSKTANPNSSNNDKSDSSGGGL

Query:  KNGTNKFGNGKPKHHSSFGGTLLVKDGMVGPSGSNTGANQ
        KNGTNK GNGKPKHHSSFGGTLLVKDGMVGPS SN GA Q
Subjt:  KNGTNKFGNGKPKHHSSFGGTLLVKDGMVGPSGSNTGANQ

XP_022941845.1 U-box domain-containing protein 62-like [Cucurbita moschata]8.5e-4576.76Show/hide
Query:  MDDKLFPVDRDRFFAHQGGDFRRSVFGDDRNW----SARNGSGKGSDE--DDDEDDDDEDEVDDGEDDVERLVSLDDVSKCSKTANPNSSNNDKSDSSGG
        MDDKLFP +RDRFFAHQGGDFR+S+F D RNW    S R GSGKGSDE  +DD+DDDDEDEVDD + DVE LVSLDDV+K  KT NPNSSNN++SD SGG
Subjt:  MDDKLFPVDRDRFFAHQGGDFRRSVFGDDRNW----SARNGSGKGSDE--DDDEDDDDEDEVDDGEDDVERLVSLDDVSKCSKTANPNSSNNDKSDSSGG

Query:  GLKNGTNKFGNGKPKHHSSFGGTLLVKDGMVGPSGSNTGANQ
        GLKNGTNK GNGKPK HSSFGGTLLVKDGM  PSGSNTG  Q
Subjt:  GLKNGTNKFGNGKPKHHSSFGGTLLVKDGMVGPSGSNTGANQ

XP_022995804.1 U-box domain-containing protein 62-like [Cucurbita maxima]6.5e-4577.3Show/hide
Query:  MDDKLFPVDRDRFFAHQGGDFRRSVFGDDRNW----SARNGSGKGSD-EDDDEDDDDEDEVDDGEDDVERLVSLDDVSKCSKTANPNSSNNDKSDSSGGG
        MDDKLFP +RDRFFAHQGGDFR+S+F D RNW    S R GSGKGSD ED+D+DDDDEDEVDD + DVE LVSLDDV+K  KT NPNSSNN++SD SGGG
Subjt:  MDDKLFPVDRDRFFAHQGGDFRRSVFGDDRNW----SARNGSGKGSD-EDDDEDDDDEDEVDDGEDDVERLVSLDDVSKCSKTANPNSSNNDKSDSSGGG

Query:  LKNGTNKFGNGKPKHHSSFGGTLLVKDGMVGPSGSNTGANQ
        LKNGTNK GNGKPK HSSFGGTLLVKDGM  PSGSNTG  Q
Subjt:  LKNGTNKFGNGKPKHHSSFGGTLLVKDGMVGPSGSNTGANQ

TrEMBL top hitse value%identityAlignment
A0A6J1CYI7 U-box domain-containing protein 62 isoform X22.1e-4980.71Show/hide
Query:  MDDKLFPVDRDRFFAHQGGDFRRSVFGDDRNW--SARNGSGKGSDE--DDDEDDDDEDEVDDGEDDVERLVSLDDVSKCSKTANPNSSNNDKSDSSGGGL
        MDDKLFPVDRDRFFAHQG DFRRSVF D RNW  SAR+GSGKGS+E  DDD+DDD+E+EVDDG+DDVE LVS+DDV+KC+K ANPNSSN+D++D S GGL
Subjt:  MDDKLFPVDRDRFFAHQGGDFRRSVFGDDRNW--SARNGSGKGSDE--DDDEDDDDEDEVDDGEDDVERLVSLDDVSKCSKTANPNSSNNDKSDSSGGGL

Query:  KNGTNKFGNGKPKHHSSFGGTLLVKDGMVGPSGSNTGANQ
        KNGTNK GNGKPKHHSSFGGTLLVKDGMVGPS SN GA Q
Subjt:  KNGTNKFGNGKPKHHSSFGGTLLVKDGMVGPSGSNTGANQ

A0A6J1CZA9 U-box domain-containing protein 62 isoform X13.6e-4979.58Show/hide
Query:  MDDKLFPVDRDRFFAHQGGDFRRSVFGDDRNW----SARNGSGKGSDE--DDDEDDDDEDEVDDGEDDVERLVSLDDVSKCSKTANPNSSNNDKSDSSGG
        MDDKLFPVDRDRFFAHQG DFRRSVF D RNW    SAR+GSGKGS+E  DDD+DDD+E+EVDDG+DDVE LVS+DDV+KC+K ANPNSSN+D++D S G
Subjt:  MDDKLFPVDRDRFFAHQGGDFRRSVFGDDRNW----SARNGSGKGSDE--DDDEDDDDEDEVDDGEDDVERLVSLDDVSKCSKTANPNSSNNDKSDSSGG

Query:  GLKNGTNKFGNGKPKHHSSFGGTLLVKDGMVGPSGSNTGANQ
        GLKNGTNK GNGKPKHHSSFGGTLLVKDGMVGPS SN GA Q
Subjt:  GLKNGTNKFGNGKPKHHSSFGGTLLVKDGMVGPSGSNTGANQ

A0A6J1FUY5 U-box domain-containing protein 62-like4.1e-4576.76Show/hide
Query:  MDDKLFPVDRDRFFAHQGGDFRRSVFGDDRNW----SARNGSGKGSDE--DDDEDDDDEDEVDDGEDDVERLVSLDDVSKCSKTANPNSSNNDKSDSSGG
        MDDKLFP +RDRFFAHQGGDFR+S+F D RNW    S R GSGKGSDE  +DD+DDDDEDEVDD + DVE LVSLDDV+K  KT NPNSSNN++SD SGG
Subjt:  MDDKLFPVDRDRFFAHQGGDFRRSVFGDDRNW----SARNGSGKGSDE--DDDEDDDDEDEVDDGEDDVERLVSLDDVSKCSKTANPNSSNNDKSDSSGG

Query:  GLKNGTNKFGNGKPKHHSSFGGTLLVKDGMVGPSGSNTGANQ
        GLKNGTNK GNGKPK HSSFGGTLLVKDGM  PSGSNTG  Q
Subjt:  GLKNGTNKFGNGKPKHHSSFGGTLLVKDGMVGPSGSNTGANQ

A0A6J1FV24 U-box domain-containing protein 62 isoform X15.9e-4477.08Show/hide
Query:  MDDKLFPVDRDRFFAHQGGDFRRSVFGDDRNW----SARNGSGKGSDE--DDDEDDDDEDEVDDGEDD--VERLVSLDDVSKCSKTANPNSSNNDKSDSS
        MDDKL PVDRDRFF HQG DFRRSVFG  RNW    SAR GSGKGSDE  DDDEDDDDEDEVDDG+DD  VE L SLDDV+KC+KTANPN +N D SD S
Subjt:  MDDKLFPVDRDRFFAHQGGDFRRSVFGDDRNW----SARNGSGKGSDE--DDDEDDDDEDEVDDGEDD--VERLVSLDDVSKCSKTANPNSSNNDKSDSS

Query:  GGGLKNGTNKFGNGKPKHHSSFGGTLLVKDGMVGPSGSNTGANQ
          GLKNGTNK GNGK KHHSSFGGTLLVKDG+VG SG NTGA +
Subjt:  GGGLKNGTNKFGNGKPKHHSSFGGTLLVKDGMVGPSGSNTGANQ

A0A6J1K6Y2 U-box domain-containing protein 62-like3.1e-4577.3Show/hide
Query:  MDDKLFPVDRDRFFAHQGGDFRRSVFGDDRNW----SARNGSGKGSD-EDDDEDDDDEDEVDDGEDDVERLVSLDDVSKCSKTANPNSSNNDKSDSSGGG
        MDDKLFP +RDRFFAHQGGDFR+S+F D RNW    S R GSGKGSD ED+D+DDDDEDEVDD + DVE LVSLDDV+K  KT NPNSSNN++SD SGGG
Subjt:  MDDKLFPVDRDRFFAHQGGDFRRSVFGDDRNW----SARNGSGKGSD-EDDDEDDDDEDEVDDGEDDVERLVSLDDVSKCSKTANPNSSNNDKSDSSGGG

Query:  LKNGTNKFGNGKPKHHSSFGGTLLVKDGMVGPSGSNTGANQ
        LKNGTNK GNGKPK HSSFGGTLLVKDGM  PSGSNTG  Q
Subjt:  LKNGTNKFGNGKPKHHSSFGGTLLVKDGMVGPSGSNTGANQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGACAAGCTCTTCCCTGTCGACCGAGACCGATTCTTTGCCCATCAGGGTGGAGATTTTCGCCGGAGTGTGTTTGGTGACGACCGGAATTGGAGTGCGAGAAATGG
AAGTGGGAAAGGATCGGATGAGGATGATGATGAGGACGACGATGATGAAGATGAAGTCGATGATGGTGAGGATGATGTTGAGAGGCTTGTTTCTTTGGATGATGTCAGTA
AGTGCAGTAAAACTGCTAACCCCAACAGCAGCAACAATGACAAAAGCGATAGTAGTGGTGGGGGCTTGAAGAATGGGACGAACAAATTCGGAAATGGGAAGCCTAAGCAC
CATTCTTCTTTTGGTGGAACTTTGTTGGTCAAGGATGGGATGGTTGGCCCTTCAGGGAGTAACACAGGAGCAAATCAGATCGCCGGCGGCGAGGGGTGGCCGCCGGTCGC
CGGACATAGGAAGAAGAAGGAGGAGGAAGGAGAAGGTGGAGAAGATGGAAAAGAAGAAGAAGATGATGAGAGAGAAAGGGAGAAAGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGACGACAAGCTCTTCCCTGTCGACCGAGACCGATTCTTTGCCCATCAGGGTGGAGATTTTCGCCGGAGTGTGTTTGGTGACGACCGGAATTGGAGTGCGAGAAATGG
AAGTGGGAAAGGATCGGATGAGGATGATGATGAGGACGACGATGATGAAGATGAAGTCGATGATGGTGAGGATGATGTTGAGAGGCTTGTTTCTTTGGATGATGTCAGTA
AGTGCAGTAAAACTGCTAACCCCAACAGCAGCAACAATGACAAAAGCGATAGTAGTGGTGGGGGCTTGAAGAATGGGACGAACAAATTCGGAAATGGGAAGCCTAAGCAC
CATTCTTCTTTTGGTGGAACTTTGTTGGTCAAGGATGGGATGGTTGGCCCTTCAGGGAGTAACACAGGAGCAAATCAGATCGCCGGCGGCGAGGGGTGGCCGCCGGTCGC
CGGACATAGGAAGAAGAAGGAGGAGGAAGGAGAAGGTGGAGAAGATGGAAAAGAAGAAGAAGATGATGAGAGAGAAAGGGAGAAAGAATAA
Protein sequenceShow/hide protein sequence
MDDKLFPVDRDRFFAHQGGDFRRSVFGDDRNWSARNGSGKGSDEDDDEDDDDEDEVDDGEDDVERLVSLDDVSKCSKTANPNSSNNDKSDSSGGGLKNGTNKFGNGKPKH
HSSFGGTLLVKDGMVGPSGSNTGANQIAGGEGWPPVAGHRKKKEEEGEGGEDGKEEEDDEREREKE