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Lag0009151 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0009151
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag/pol protein
Genome locationchr9:35996842..36000933
RNA-Seq ExpressionLag0009151
SyntenyLag0009151
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa]1.5e-2687.5Show/hide
Query:  GLVTNFKEPRRHKRGKHIKSKYHLIREIIQRGDVIVTKIASEHNFADPFTKTLTTKVFEGHLESLGLRDMYI
        G V N KEPR HKRGKHI+ KYHLIREI+QRGDVIVTKIASEHN ADPFTKTLT KVFEGHLESLGLRDMYI
Subjt:  GLVTNFKEPRRHKRGKHIKSKYHLIREIIQRGDVIVTKIASEHNFADPFTKTLTTKVFEGHLESLGLRDMYI
KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa]1.5e-2687.5Show/hide
Query:  GLVTNFKEPRRHKRGKHIKSKYHLIREIIQRGDVIVTKIASEHNFADPFTKTLTTKVFEGHLESLGLRDMYI
        G V N KEPR HKRGKHI+ KYHLIREI+QRGDVIVTKIASEHN ADPFTKTLT KVFEGHLESLGLRDMYI
Subjt:  GLVTNFKEPRRHKRGKHIKSKYHLIREIIQRGDVIVTKIASEHNFADPFTKTLTTKVFEGHLESLGLRDMYI
KAA0042496.1 gag/pol protein [Cucumis melo var. makuwa]1.5e-2687.5Show/hide
Query:  GLVTNFKEPRRHKRGKHIKSKYHLIREIIQRGDVIVTKIASEHNFADPFTKTLTTKVFEGHLESLGLRDMYI
        G V N KEPR HKRGKHI+ KYHLIREI+QRGDVIVTKIASEHN ADPFTKTLT KVFEGHLESLGLRDMYI
Subjt:  GLVTNFKEPRRHKRGKHIKSKYHLIREIIQRGDVIVTKIASEHNFADPFTKTLTTKVFEGHLESLGLRDMYI
KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa]1.5e-2687.5Show/hide
Query:  GLVTNFKEPRRHKRGKHIKSKYHLIREIIQRGDVIVTKIASEHNFADPFTKTLTTKVFEGHLESLGLRDMYI
        G V N KEPR HKRGKHI+ KYHLIREI+QRGDVIVTKIASEHN ADPFTKTLT KVFEGHLESLGLRDMYI
Subjt:  GLVTNFKEPRRHKRGKHIKSKYHLIREIIQRGDVIVTKIASEHNFADPFTKTLTTKVFEGHLESLGLRDMYI
KAA0065398.1 retrovirus-related pol polyprotein from transposon tnt 1-94 [Cucumis melo var. makuwa]6.7e-2788.89Show/hide
Query:  GLVTNFKEPRRHKRGKHIKSKYHLIREIIQRGDVIVTKIASEHNFADPFTKTLTTKVFEGHLESLGLRDMYI
        G V N KEPR HKRGKHI+ KYHLIREI+QRGDVIVTKIASEHN ADPFTKTLTTKVFEGHLESLGLRDMYI
Subjt:  GLVTNFKEPRRHKRGKHIKSKYHLIREIIQRGDVIVTKIASEHNFADPFTKTLTTKVFEGHLESLGLRDMYI
TrEMBL top hitse value%identityAlignment
A0A5A7T2V9 Gag/pol protein7.3e-2787.5Show/hide
Query:  GLVTNFKEPRRHKRGKHIKSKYHLIREIIQRGDVIVTKIASEHNFADPFTKTLTTKVFEGHLESLGLRDMYI
        G V N KEPR HKRGKHI+ KYHLIREI+QRGDVIVTKIASEHN ADPFTKTLT KVFEGHLESLGLRDMYI
Subjt:  GLVTNFKEPRRHKRGKHIKSKYHLIREIIQRGDVIVTKIASEHNFADPFTKTLTTKVFEGHLESLGLRDMYI
A0A5A7TKM4 Gag/pol protein7.3e-2787.5Show/hide
Query:  GLVTNFKEPRRHKRGKHIKSKYHLIREIIQRGDVIVTKIASEHNFADPFTKTLTTKVFEGHLESLGLRDMYI
        G V N KEPR HKRGKHI+ KYHLIREI+QRGDVIVTKIASEHN ADPFTKTLT KVFEGHLESLGLRDMYI
Subjt:  GLVTNFKEPRRHKRGKHIKSKYHLIREIIQRGDVIVTKIASEHNFADPFTKTLTTKVFEGHLESLGLRDMYI
A0A5A7TZD0 Gag/pol protein7.3e-2787.5Show/hide
Query:  GLVTNFKEPRRHKRGKHIKSKYHLIREIIQRGDVIVTKIASEHNFADPFTKTLTTKVFEGHLESLGLRDMYI
        G V N KEPR HKRGKHI+ KYHLIREI+QRGDVIVTKIASEHN ADPFTKTLT KVFEGHLESLGLRDMYI
Subjt:  GLVTNFKEPRRHKRGKHIKSKYHLIREIIQRGDVIVTKIASEHNFADPFTKTLTTKVFEGHLESLGLRDMYI
A0A5A7UYE8 Gag/pol protein7.3e-2787.5Show/hide
Query:  GLVTNFKEPRRHKRGKHIKSKYHLIREIIQRGDVIVTKIASEHNFADPFTKTLTTKVFEGHLESLGLRDMYI
        G V N KEPR HKRGKHI+ KYHLIREI+QRGDVIVTKIASEHN ADPFTKTLT KVFEGHLESLGLRDMYI
Subjt:  GLVTNFKEPRRHKRGKHIKSKYHLIREIIQRGDVIVTKIASEHNFADPFTKTLTTKVFEGHLESLGLRDMYI
A0A5A7VCP0 Retrovirus-related pol polyprotein from transposon tnt 1-943.3e-2788.89Show/hide
Query:  GLVTNFKEPRRHKRGKHIKSKYHLIREIIQRGDVIVTKIASEHNFADPFTKTLTTKVFEGHLESLGLRDMYI
        G V N KEPR HKRGKHI+ KYHLIREI+QRGDVIVTKIASEHN ADPFTKTLTTKVFEGHLESLGLRDMYI
Subjt:  GLVTNFKEPRRHKRGKHIKSKYHLIREIIQRGDVIVTKIASEHNFADPFTKTLTTKVFEGHLESLGLRDMYI
SwissProt top hitse value%identityAlignment
P04146 Copia protein9.9e-0529.92Show/hide
Query:  TRKHLAVISKHIERKYHLIREIVHRG---DVIVTKIPSEHKIVDPFTKALTTKVFESHLEGLVTNFKEPRRHKRGKHIKSKYHLIREIIQRGDVIVTKIA
        T++  +V +   E +Y  + E V        ++T I    K+ +P       K++E + +G ++    P  HKR KHI  KYH  RE +Q   + +  I 
Subjt:  TRKHLAVISKHIERKYHLIREIVHRG---DVIVTKIPSEHKIVDPFTKALTTKVFESHLEGLVTNFKEPRRHKRGKHIKSKYHLIREIIQRGDVIVTKIA

Query:  SEHNFADPFTKTLTTKVFEGHLESLGL
        +E+  AD FTK L    F    + LGL
Subjt:  SEHNFADPFTKTLTTKVFEGHLESLGL
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATAGTAGACTCGACCATGGAGGTCGAATATGTAGCTGCTTGCAAAGCAGCGAAAAAGTGGGGCATTTGCAAACTCGAAAACACCTCGCAGTCATAAGCAAGCACAT
TGAAAGAAAATATCATCTGATCCGGGAGATCGTGCACCGAGGAGACGTGATCGTTACGAAGATACCGTCAGAGCACAAAATTGTTGATCCATTCACGAAGGCTCTCACGA
CTAAAGTGTTTGAGAGTCATCTGGAAGGTCTAGTGACAAATTTTAAAGAACCTCGCAGACACAAAAGAGGCAAACACATAAAGAGCAAATATCATCTCATCCGAGAGATC
ATACAACGAGGGGACGTGATCGTCACGAAGATAGCTTCGGAGCACAACTTTGCCGATCCATTTACGAAGACTCTCACGACCAAAGTGTTCGAGGGTCATCTAGAGAGTCT
AGGTCTACGAGATATGTACATAGTGGGAGAAATCGCCAAAGAATTAGGGTTTCTCTGTGTTGATTTACACTTACACTTCCGATCGCTTTCGATTTCTTCTTCTTTCTTCC
CCAACAACAACAACACCATCGCCAGTTTTAAGGAGGCTTCTACATCTCTAAAGCAAACATCACGCCATAACCTCATAGATGGTTTTGATGAGAGGGAGAATTCTGTTTCC
ACCAAAAACAGTCGCATAAACAACCATTTGAAGTTGCAAAGCGTGCAAACGTTTAAGTTAATCTTCAAATCTAAAGTGCAATGGACACGTAATATCACTCGTTCTAACAT
TGGAAATGTACTTCCAAAGGACAATGATGATAGAAGGAAGCAGAAGAGAAAGCGAACTGATAAGAAATCTTCAAAGAAGTCTAAACGGCAAAAACAACTGAAAGAATGCG
AAGAGTTGAAAGCAAAACTAAACAGTCTAAATATGAAAGTTTCAAATCTTACGAAGCAATTAAGAACACTCATGGAGGACTTTGAAACAATTAGCAAAGAGAACACTTCT
TTAATGGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGCATAGTAGACTCGACCATGGAGGTCGAATATGTAGCTGCTTGCAAAGCAGCGAAAAAGTGGGGCATTTGCAAACTCGAAAACACCTCGCAGTCATAAGCAAGCACAT
TGAAAGAAAATATCATCTGATCCGGGAGATCGTGCACCGAGGAGACGTGATCGTTACGAAGATACCGTCAGAGCACAAAATTGTTGATCCATTCACGAAGGCTCTCACGA
CTAAAGTGTTTGAGAGTCATCTGGAAGGTCTAGTGACAAATTTTAAAGAACCTCGCAGACACAAAAGAGGCAAACACATAAAGAGCAAATATCATCTCATCCGAGAGATC
ATACAACGAGGGGACGTGATCGTCACGAAGATAGCTTCGGAGCACAACTTTGCCGATCCATTTACGAAGACTCTCACGACCAAAGTGTTCGAGGGTCATCTAGAGAGTCT
AGGTCTACGAGATATGTACATAGTGGGAGAAATCGCCAAAGAATTAGGGTTTCTCTGTGTTGATTTACACTTACACTTCCGATCGCTTTCGATTTCTTCTTCTTTCTTCC
CCAACAACAACAACACCATCGCCAGTTTTAAGGAGGCTTCTACATCTCTAAAGCAAACATCACGCCATAACCTCATAGATGGTTTTGATGAGAGGGAGAATTCTGTTTCC
ACCAAAAACAGTCGCATAAACAACCATTTGAAGTTGCAAAGCGTGCAAACGTTTAAGTTAATCTTCAAATCTAAAGTGCAATGGACACGTAATATCACTCGTTCTAACAT
TGGAAATGTACTTCCAAAGGACAATGATGATAGAAGGAAGCAGAAGAGAAAGCGAACTGATAAGAAATCTTCAAAGAAGTCTAAACGGCAAAAACAACTGAAAGAATGCG
AAGAGTTGAAAGCAAAACTAAACAGTCTAAATATGAAAGTTTCAAATCTTACGAAGCAATTAAGAACACTCATGGAGGACTTTGAAACAATTAGCAAAGAGAACACTTCT
TTAATGGTATGA
Protein sequenceShow/hide protein sequence
MHSRLDHGGRICSCLQSSEKVGHLQTRKHLAVISKHIERKYHLIREIVHRGDVIVTKIPSEHKIVDPFTKALTTKVFESHLEGLVTNFKEPRRHKRGKHIKSKYHLIREI
IQRGDVIVTKIASEHNFADPFTKTLTTKVFEGHLESLGLRDMYIVGEIAKELGFLCVDLHLHFRSLSISSSFFPNNNNTIASFKEASTSLKQTSRHNLIDGFDERENSVS
TKNSRINNHLKLQSVQTFKLIFKSKVQWTRNITRSNIGNVLPKDNDDRRKQKRKRTDKKSSKKSKRQKQLKECEELKAKLNSLNMKVSNLTKQLRTLMEDFETISKENTS
LMV