; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0009183 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0009183
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr9:36526908..36532879
RNA-Seq ExpressionLag0009183
SyntenyLag0009183
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4351405.1 hypothetical protein F8388_001025, partial [Cannabis sativa]3.1e-1355.07Show/hide
Query:  LSRLRGCTDTPWLIGGDFNAILCQDEKDGGRDKPLSELSAFQNVVDSCGLLDLGFVGDRFTWCNRRPGV
        L RL+G  D PW+ GGDFN IL  +EK GG D+ LS +S FQ  +D C L+D+GF G  FTW N+R GV
Subjt:  LSRLRGCTDTPWLIGGDFNAILCQDEKDGGRDKPLSELSAFQNVVDSCGLLDLGFVGDRFTWCNRRPGV

KAF4366602.1 hypothetical protein F8388_004266 [Cannabis sativa]1.8e-1344.44Show/hide
Query:  LSRLRGCTDTPWLIGGDFNAILCQDEKDGGRDKPLSELSAFQNVVDSCGLLDLGFVGDRFTWCNRRPGVERFMSGWIGSLAPRPGRTFIL
        L RL+   D PW+ GGDFN +L  +EK GG D+ L  +S FQ  +D C L D+GF G  FTW N+R G        I  +A R G T  L
Subjt:  LSRLRGCTDTPWLIGGDFNAILCQDEKDGGRDKPLSELSAFQNVVDSCGLLDLGFVGDRFTWCNRRPGVERFMSGWIGSLAPRPGRTFIL

KAF4404044.1 hypothetical protein G4B88_014500 [Cannabis sativa]1.4e-1345.16Show/hide
Query:  LSRLRGCTDTPWLIGGDFNAILCQDEKDGGRDKPLSELSAFQNVVDSCGLLDLGFVGDRFTWCNRRPGVERFMSGWIGSLAPRPGRT-FILVM
        L RL+   D PW+ GGDFN +L  +EK GG D+ L  +S FQ  +D C L D+GF G  FTW N+R G        I  +A R G T F+ VM
Subjt:  LSRLRGCTDTPWLIGGDFNAILCQDEKDGGRDKPLSELSAFQNVVDSCGLLDLGFVGDRFTWCNRRPGVERFMSGWIGSLAPRPGRT-FILVM

KAF7812560.1 uncharacterized protein G2W53_033536 [Senna tora]8.0e-1456.34Show/hide
Query:  DLVALSRLRGCTDTPWLIGGDFNAILCQDEKDGGRDKPLSELSAFQNVVDSCGLLDLGFVGDRFTWCNRRP
        +LV LS +    + PWL+GGDFN IL  DEK G RD  L+ ++ FQN +D+CGL DLGF G +FTWCN+RP
Subjt:  DLVALSRLRGCTDTPWLIGGDFNAILCQDEKDGGRDKPLSELSAFQNVVDSCGLLDLGFVGDRFTWCNRRP

TXG73661.1 hypothetical protein EZV62_002240 [Acer yangbiense]2.5e-1523.69Show/hide
Query:  VDGL--VRLCVIGKVFSSKRVNVEAFRNVMRAAWRAHGATRIESAGENLFAIKFKSKGEKMRVMSTDSQCAYALADEEMAQHLGVGLVLWKRLVVLGMVT
        +DG+  V  C++GKV + K+VN +AF+ ++   W   G   IE  G+N+F   F +  ++ +V                  H G        L+VL    
Subjt:  VDGL--VRLCVIGKVFSSKRVNVEAFRNVMRAAWRAHGATRIESAGENLFAIKFKSKGEKMRVMSTDSQCAYALADEEMAQHLGVGLVLWKRLVVLGMVT

Query:  GRVRSFEYGSSED-GRPLRRGFRCRMRRVK--NSVSGLYERLPDFCYDVGVWG-----------------TQKGVWGLWVMVYRTSRGAVRGMAEG----
        G  +        D  +PL+R  + ++ + +    V+  YERLP+FC+  G  G                      +G W+    + R  +RG  +     
Subjt:  GRVRSFEYGSSED-GRPLRRGFRCRMRRVK--NSVSGLYERLPDFCYDVGVWG-----------------TQKGVWGLWVMVYRTSRGAVRGMAEG----

Query:  ----RVS--QQPEVPKPLLRVGDREAVPEKEGEGLLVFRGGVEAQGEGEQKVGDVTIQWGWEGG----EDMMLVDMMGRARGRDGGKGMECGGWTGGKRS
            R+S  +QP    P+         P ++G   +     +EA+           I   W+      +   LV ++     R     +E       K+S
Subjt:  ----RVS--QQPEVPKPLLRVGDREAVPEKEGEGLLVFRGGVEAQGEGEQKVGDVTIQWGWEGG----EDMMLVDMMGRARGRDGGKGMECGGWTGGKRS

Query:  KGGDDEGAGTGAAVDCVGGGWLQPRPGYEFDILECSGSGSPRTFRRLNKLVAFHWLLWFPCNRPALPDLVALSRLRGCTDTPWLIGGDFNAILCQDEKDG
        +                      P+ G+ +        G P + RR      F W L              L RLR   + PW+  GDFN IL   EK+G
Subjt:  KGGDDEGAGTGAAVDCVGGGWLQPRPGYEFDILECSGSGSPRTFRRLNKLVAFHWLLWFPCNRPALPDLVALSRLRGCTDTPWLIGGDFNAILCQDEKDG

Query:  GRDKPLSELSAFQNVVDSCGLLDLGFVGDRFTWCNRRPG
        G  K  S++  F+ +VD+C L DLGF G ++TW N++ G
Subjt:  GRDKPLSELSAFQNVVDSCGLLDLGFVGDRFTWCNRRPG

TrEMBL top hitse value%identityAlignment
A0A5C7IWJ4 CCHC-type domain-containing protein1.2e-1523.69Show/hide
Query:  VDGL--VRLCVIGKVFSSKRVNVEAFRNVMRAAWRAHGATRIESAGENLFAIKFKSKGEKMRVMSTDSQCAYALADEEMAQHLGVGLVLWKRLVVLGMVT
        +DG+  V  C++GKV + K+VN +AF+ ++   W   G   IE  G+N+F   F +  ++ +V                  H G        L+VL    
Subjt:  VDGL--VRLCVIGKVFSSKRVNVEAFRNVMRAAWRAHGATRIESAGENLFAIKFKSKGEKMRVMSTDSQCAYALADEEMAQHLGVGLVLWKRLVVLGMVT

Query:  GRVRSFEYGSSED-GRPLRRGFRCRMRRVK--NSVSGLYERLPDFCYDVGVWG-----------------TQKGVWGLWVMVYRTSRGAVRGMAEG----
        G  +        D  +PL+R  + ++ + +    V+  YERLP+FC+  G  G                      +G W+    + R  +RG  +     
Subjt:  GRVRSFEYGSSED-GRPLRRGFRCRMRRVK--NSVSGLYERLPDFCYDVGVWG-----------------TQKGVWGLWVMVYRTSRGAVRGMAEG----

Query:  ----RVS--QQPEVPKPLLRVGDREAVPEKEGEGLLVFRGGVEAQGEGEQKVGDVTIQWGWEGG----EDMMLVDMMGRARGRDGGKGMECGGWTGGKRS
            R+S  +QP    P+         P ++G   +     +EA+           I   W+      +   LV ++     R     +E       K+S
Subjt:  ----RVS--QQPEVPKPLLRVGDREAVPEKEGEGLLVFRGGVEAQGEGEQKVGDVTIQWGWEGG----EDMMLVDMMGRARGRDGGKGMECGGWTGGKRS

Query:  KGGDDEGAGTGAAVDCVGGGWLQPRPGYEFDILECSGSGSPRTFRRLNKLVAFHWLLWFPCNRPALPDLVALSRLRGCTDTPWLIGGDFNAILCQDEKDG
        +                      P+ G+ +        G P + RR      F W L              L RLR   + PW+  GDFN IL   EK+G
Subjt:  KGGDDEGAGTGAAVDCVGGGWLQPRPGYEFDILECSGSGSPRTFRRLNKLVAFHWLLWFPCNRPALPDLVALSRLRGCTDTPWLIGGDFNAILCQDEKDG

Query:  GRDKPLSELSAFQNVVDSCGLLDLGFVGDRFTWCNRRPG
        G  K  S++  F+ +VD+C L DLGF G ++TW N++ G
Subjt:  GRDKPLSELSAFQNVVDSCGLLDLGFVGDRFTWCNRRPG

A0A7J6DZ24 CCHC-type domain-containing protein1.5e-1355.07Show/hide
Query:  LSRLRGCTDTPWLIGGDFNAILCQDEKDGGRDKPLSELSAFQNVVDSCGLLDLGFVGDRFTWCNRRPGV
        L RL+G  D PW+ GGDFN IL  +EK GG D+ LS +S FQ  +D C L+D+GF G  FTW N+R GV
Subjt:  LSRLRGCTDTPWLIGGDFNAILCQDEKDGGRDKPLSELSAFQNVVDSCGLLDLGFVGDRFTWCNRRPGV

A0A7J6F7B9 DUF4283 domain-containing protein8.7e-1444.44Show/hide
Query:  LSRLRGCTDTPWLIGGDFNAILCQDEKDGGRDKPLSELSAFQNVVDSCGLLDLGFVGDRFTWCNRRPGVERFMSGWIGSLAPRPGRTFIL
        L RL+   D PW+ GGDFN +L  +EK GG D+ L  +S FQ  +D C L D+GF G  FTW N+R G        I  +A R G T  L
Subjt:  LSRLRGCTDTPWLIGGDFNAILCQDEKDGGRDKPLSELSAFQNVVDSCGLLDLGFVGDRFTWCNRRPGVERFMSGWIGSLAPRPGRTFIL

A0A7J6FPV7 CCHC-type domain-containing protein1.9e-1353.62Show/hide
Query:  LSRLRGCTDTPWLIGGDFNAILCQDEKDGGRDKPLSELSAFQNVVDSCGLLDLGFVGDRFTWCNRRPGV
        L RL+G  D PW+ GGDFN +L  +EK GG D+ LS +S FQ  +D C L+D+GF G  FTW N+R GV
Subjt:  LSRLRGCTDTPWLIGGDFNAILCQDEKDGGRDKPLSELSAFQNVVDSCGLLDLGFVGDRFTWCNRRPGV

A0A7J6I8Y9 DUF4283 domain-containing protein6.6e-1445.16Show/hide
Query:  LSRLRGCTDTPWLIGGDFNAILCQDEKDGGRDKPLSELSAFQNVVDSCGLLDLGFVGDRFTWCNRRPGVERFMSGWIGSLAPRPGRT-FILVM
        L RL+   D PW+ GGDFN +L  +EK GG D+ L  +S FQ  +D C L D+GF G  FTW N+R G        I  +A R G T F+ VM
Subjt:  LSRLRGCTDTPWLIGGDFNAILCQDEKDGGRDKPLSELSAFQNVVDSCGLLDLGFVGDRFTWCNRRPGVERFMSGWIGSLAPRPGRT-FILVM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCAATAAAAATGCTCGAAGCAAATGCAATTCTCGAGGGTCAAAGGAAGAGGGCATTCTCACAAAACAACCGCTGGTGATCAAATCAGACTCCAACGAAGTCATCTC
GACCCTAAATCACGAGTCGGAAGACCAATCAGAGATTTCCTTAATTGTCAAAGAAATCGGCGAGCTTGTTTCTACAGCCAACGTGATCACCTTCTCCAAATGTTCAAGGG
TTTTCAGACGGTTTCGTGGCGGCGACTTGACGGCGCGGTGGACGGTGGCGGAGACGCGACGGCGTGGAGGTTTCGAAGTGGCAGAGGCGATCGGTGATACGGGCGGGTCT
GTGGCGGAGACGCGACGGCCTGAGTTTCTGTGGGTTTTCGGAGGTTCGTGGCGGCGACTTGACGGCGCGGTGGCCTGGGGCGGAGACGCGGCGACGTGGAGGTTTCGAAG
TGGCAGAGGCGACCGAGGCGGTGATACGTGCGGGTCTGTGGCGGTAGTTTTGGGCTGGTGTGCAGTGAGCGGCTGTGAATCGAGGGTTGGGGTTGTCGATTTCTGCGGCA
GTGGCTGGGGTGGGTCTGAGATTGGGAGCAGGGGTACAGTGGAGTGGCTGGTTGTGCGGCTCGGATGGGTTCTACTGGACCGATTGTGTGTTGCGAGTGGTGGGGTATGG
CTGGTTGACGGGGTTTTGTGCAGTGGCGCATGTGGGGGTGGTGGTTTGGAGGGTGCTGTGCTTGCAGTCTCTACTAGGGGGTGGAATTCTTGGAAGTTGCGGAGAGGAGG
CAGAGTTGGTTCGGCCTGGGGAGGGAGCATCGGTTTTGTCGATGGACTCGTTAGGTTATGTGTGATAGGGAAAGTGTTCTCCTCGAAGCGTGTGAATGTGGAGGCGTTTC
GAAATGTCATGAGGGCAGCGTGGAGAGCTCATGGGGCAACGCGTATAGAGTCAGCAGGGGAGAATTTATTTGCGATTAAATTCAAATCCAAAGGGGAAAAGATGCGAGTG
ATGTCTACGGATTCACAATGTGCCTATGCGCTGGCAGACGAGGAGATGGCTCAGCATTTGGGGGTAGGATTGGTACTGTGGAAGAGGTTGGTGGTCCTGGGGATGGTGAC
TGGACGGGTCCGATCCTTCGAATACGGGTCTTCTGAAGATGGTAGGCCGCTGAGGAGAGGGTTTCGTTGCAGGATGAGGAGGGTAAAGAATTCGGTGTCCGGTTTGTATG
AGCGGCTGCCAGATTTCTGTTATGATGTGGGTGTCTGGGGCACTCAGAAGGGAGTGTGGGGACTGTGGGTGATGGTGTATCGGACCAGCAGGGGAGCAGTACGGGGAATG
GCTGAGGGCAGGGTGAGTCAGCAGCCTGAGGTCCCGAAGCCTCTGCTGAGGGTTGGTGACCGTGAGGCTGTTCCTGAGAAGGAAGGGGAGGGGCTATTAGTGTTCAGGGG
AGGTGTGGAAGCTCAGGGAGAAGGGGAACAGAAGGTGGGGGATGTCACGATTCAGTGGGGTTGGGAGGGAGGTGAGGATATGATGTTGGTTGACATGATGGGCAGGGCAA
GGGGTAGAGACGGGGGGAAAGGGATGGAGTGTGGAGGGTGGACTGGGGGGAAGAGGTCGAAAGGAGGGGATGATGAGGGAGCGGGTACGGGTGCAGCTGTTGACTGTGTT
GGCGGTGGCTGGCTCCAGCCCCGCCCGGGTTATGAGTTTGATATTTTGGAATGTTCGGGGTCGGGGTCACCCCGAACATTCAGGCGCCTGAACAAGCTGGTGGCGTTTCA
CTGGCTTCTATGGTTTCCCTGCAACAGACCAGCACTTCCAGACTTGGTCGCTTTATCCAGATTAAGGGGGTGCACTGATACACCATGGCTGATTGGGGGTGACTTCAACG
CTATCTTATGTCAGGATGAGAAGGATGGGGGCAGGGATAAGCCGTTGTCTGAACTGTCTGCTTTTCAGAATGTGGTGGACTCATGTGGACTGCTTGATTTGGGATTCGTG
GGTGATCGCTTCACGTGGTGTAATAGGCGGCCGGGGGTGGAACGATTTATGAGCGGTTGGATCGGGTCTTTGGCACCACGACCTGGACGGACCTTTATCCTAGTTATGTG
GTGA
mRNA sequenceShow/hide mRNA sequence
ATGACCAATAAAAATGCTCGAAGCAAATGCAATTCTCGAGGGTCAAAGGAAGAGGGCATTCTCACAAAACAACCGCTGGTGATCAAATCAGACTCCAACGAAGTCATCTC
GACCCTAAATCACGAGTCGGAAGACCAATCAGAGATTTCCTTAATTGTCAAAGAAATCGGCGAGCTTGTTTCTACAGCCAACGTGATCACCTTCTCCAAATGTTCAAGGG
TTTTCAGACGGTTTCGTGGCGGCGACTTGACGGCGCGGTGGACGGTGGCGGAGACGCGACGGCGTGGAGGTTTCGAAGTGGCAGAGGCGATCGGTGATACGGGCGGGTCT
GTGGCGGAGACGCGACGGCCTGAGTTTCTGTGGGTTTTCGGAGGTTCGTGGCGGCGACTTGACGGCGCGGTGGCCTGGGGCGGAGACGCGGCGACGTGGAGGTTTCGAAG
TGGCAGAGGCGACCGAGGCGGTGATACGTGCGGGTCTGTGGCGGTAGTTTTGGGCTGGTGTGCAGTGAGCGGCTGTGAATCGAGGGTTGGGGTTGTCGATTTCTGCGGCA
GTGGCTGGGGTGGGTCTGAGATTGGGAGCAGGGGTACAGTGGAGTGGCTGGTTGTGCGGCTCGGATGGGTTCTACTGGACCGATTGTGTGTTGCGAGTGGTGGGGTATGG
CTGGTTGACGGGGTTTTGTGCAGTGGCGCATGTGGGGGTGGTGGTTTGGAGGGTGCTGTGCTTGCAGTCTCTACTAGGGGGTGGAATTCTTGGAAGTTGCGGAGAGGAGG
CAGAGTTGGTTCGGCCTGGGGAGGGAGCATCGGTTTTGTCGATGGACTCGTTAGGTTATGTGTGATAGGGAAAGTGTTCTCCTCGAAGCGTGTGAATGTGGAGGCGTTTC
GAAATGTCATGAGGGCAGCGTGGAGAGCTCATGGGGCAACGCGTATAGAGTCAGCAGGGGAGAATTTATTTGCGATTAAATTCAAATCCAAAGGGGAAAAGATGCGAGTG
ATGTCTACGGATTCACAATGTGCCTATGCGCTGGCAGACGAGGAGATGGCTCAGCATTTGGGGGTAGGATTGGTACTGTGGAAGAGGTTGGTGGTCCTGGGGATGGTGAC
TGGACGGGTCCGATCCTTCGAATACGGGTCTTCTGAAGATGGTAGGCCGCTGAGGAGAGGGTTTCGTTGCAGGATGAGGAGGGTAAAGAATTCGGTGTCCGGTTTGTATG
AGCGGCTGCCAGATTTCTGTTATGATGTGGGTGTCTGGGGCACTCAGAAGGGAGTGTGGGGACTGTGGGTGATGGTGTATCGGACCAGCAGGGGAGCAGTACGGGGAATG
GCTGAGGGCAGGGTGAGTCAGCAGCCTGAGGTCCCGAAGCCTCTGCTGAGGGTTGGTGACCGTGAGGCTGTTCCTGAGAAGGAAGGGGAGGGGCTATTAGTGTTCAGGGG
AGGTGTGGAAGCTCAGGGAGAAGGGGAACAGAAGGTGGGGGATGTCACGATTCAGTGGGGTTGGGAGGGAGGTGAGGATATGATGTTGGTTGACATGATGGGCAGGGCAA
GGGGTAGAGACGGGGGGAAAGGGATGGAGTGTGGAGGGTGGACTGGGGGGAAGAGGTCGAAAGGAGGGGATGATGAGGGAGCGGGTACGGGTGCAGCTGTTGACTGTGTT
GGCGGTGGCTGGCTCCAGCCCCGCCCGGGTTATGAGTTTGATATTTTGGAATGTTCGGGGTCGGGGTCACCCCGAACATTCAGGCGCCTGAACAAGCTGGTGGCGTTTCA
CTGGCTTCTATGGTTTCCCTGCAACAGACCAGCACTTCCAGACTTGGTCGCTTTATCCAGATTAAGGGGGTGCACTGATACACCATGGCTGATTGGGGGTGACTTCAACG
CTATCTTATGTCAGGATGAGAAGGATGGGGGCAGGGATAAGCCGTTGTCTGAACTGTCTGCTTTTCAGAATGTGGTGGACTCATGTGGACTGCTTGATTTGGGATTCGTG
GGTGATCGCTTCACGTGGTGTAATAGGCGGCCGGGGGTGGAACGATTTATGAGCGGTTGGATCGGGTCTTTGGCACCACGACCTGGACGGACCTTTATCCTAGTTATGTG
GTGA
Protein sequenceShow/hide protein sequence
MTNKNARSKCNSRGSKEEGILTKQPLVIKSDSNEVISTLNHESEDQSEISLIVKEIGELVSTANVITFSKCSRVFRRFRGGDLTARWTVAETRRRGGFEVAEAIGDTGGS
VAETRRPEFLWVFGGSWRRLDGAVAWGGDAATWRFRSGRGDRGGDTCGSVAVVLGWCAVSGCESRVGVVDFCGSGWGGSEIGSRGTVEWLVVRLGWVLLDRLCVASGGVW
LVDGVLCSGACGGGGLEGAVLAVSTRGWNSWKLRRGGRVGSAWGGSIGFVDGLVRLCVIGKVFSSKRVNVEAFRNVMRAAWRAHGATRIESAGENLFAIKFKSKGEKMRV
MSTDSQCAYALADEEMAQHLGVGLVLWKRLVVLGMVTGRVRSFEYGSSEDGRPLRRGFRCRMRRVKNSVSGLYERLPDFCYDVGVWGTQKGVWGLWVMVYRTSRGAVRGM
AEGRVSQQPEVPKPLLRVGDREAVPEKEGEGLLVFRGGVEAQGEGEQKVGDVTIQWGWEGGEDMMLVDMMGRARGRDGGKGMECGGWTGGKRSKGGDDEGAGTGAAVDCV
GGGWLQPRPGYEFDILECSGSGSPRTFRRLNKLVAFHWLLWFPCNRPALPDLVALSRLRGCTDTPWLIGGDFNAILCQDEKDGGRDKPLSELSAFQNVVDSCGLLDLGFV
GDRFTWCNRRPGVERFMSGWIGSLAPRPGRTFILVMW